BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Akebia27_contig00021522
         (1126 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_005645032.1| hypothetical protein COCSUDRAFT_43923 [Cocco...   211   5e-52
tpg|DAA05917.1| TPA_inf: chloroplast photosystem II 22 kDa PsbS ...   142   2e-31
tpg|DAA05916.1| TPA_inf: chloroplast photosystem II 22 kDa PsbS ...   140   1e-30
ref|XP_002955730.1| hypothetical protein VOLCADRAFT_83375 [Volvo...   133   1e-28
ref|XP_001689923.1| chloroplast photosystem II-associated 22 kDa...   133   2e-28
ref|XP_001689476.1| chloroplast photosystem II-associated 22 kDa...   133   2e-28
gb|AFW18037.1| chloroplast photosystem II subunit S [Ulva prolif...   132   3e-28
ref|XP_005643692.1| hypothetical protein COCSUDRAFT_59631 [Cocco...   130   8e-28
gb|AER58182.1| chloroplast photosystem II subunit S [Ulva linza]      129   2e-27
gb|AFK43146.1| unknown [Lotus japonicus]                              128   4e-27
gb|EXC10209.1| hypothetical protein L484_004387 [Morus notabilis]     124   7e-26
ref|XP_004502468.1| PREDICTED: photosystem II 22 kDa protein, ch...   124   7e-26
ref|XP_005644173.1| hypothetical protein COCSUDRAFT_19247, parti...   123   1e-25
gb|AHM26637.1| photosystem II 22 kDa protein [Pyrus x bretschnei...   123   2e-25
tpg|DAA56631.1| TPA: photosystem II protein [Zea mays]                122   3e-25
gb|AEK26371.1| chloroplast photosystem II subunit [Sedum alfredii]    121   5e-25
ref|XP_004150442.1| PREDICTED: photosystem II 22 kDa protein, ch...   121   6e-25
ref|XP_004290871.1| PREDICTED: photosystem II 22 kDa protein, ch...   120   8e-25
sp|Q02060.1|PSBS_SPIOL RecName: Full=Photosystem II 22 kDa prote...   120   8e-25
ref|XP_003602031.1| Photosystem II 22 kDa protein [Medicago trun...   120   8e-25

>ref|XP_005645032.1| hypothetical protein COCSUDRAFT_43923 [Coccomyxa subellipsoidea
           C-169] gi|384247000|gb|EIE20488.1| hypothetical protein
           COCSUDRAFT_43923 [Coccomyxa subellipsoidea C-169]
          Length = 221

 Score =  211 bits (537), Expect = 5e-52
 Identities = 116/207 (56%), Positives = 140/207 (67%), Gaps = 1/207 (0%)
 Frame = +1

Query: 256 SKVSYDSNEYQTNPAQSAFTRRREIFVGRTAMTGFFTCVIGELITGKGAIGQLNLETSLP 435
           +KV YD  + +TNP QSAFTRRREI+VGRTAMTGF + VIGEL+TG+GA+GQL LET LP
Sbjct: 20  AKVQYDDAK-ETNPLQSAFTRRREIWVGRTAMTGFLSAVIGELLTGRGALGQLQLETRLP 78

Query: 436 PFALKAGLLAIVGFNLVTALLP-NATFSDENQKDVRKRPAGGVQKPGKKNLISDPQGTLG 612
              +   +  IV FN VTAL P   TF ++NQ DVRKRPAG  QK    +  ++  GT  
Sbjct: 79  QNVINWAVFGIVAFNFVTALNPFGPTFDEDNQADVRKRPAGPTQKAMDPSKPAEYFGT-- 136

Query: 613 ISESGFGFTKKNELFVGRVAMLGFSAELIGEELTGGKGPLAQIGVPLGQPLNKEIAGAAL 792
               GFGFTKKNELFVGRVAMLGF++ELIGE LT GKGPL QIG+PL   +N + A  AL
Sbjct: 137 --SKGFGFTKKNELFVGRVAMLGFASELIGEVLTKGKGPLGQIGIPLNTEVNPQYATFAL 194

Query: 793 FLWXXXXXXXXXXXXNLGQQTGNEDVY 873
            +W            N GQQ G+ ++Y
Sbjct: 195 AVWVGFFLFAAIGFGNWGQQEGDNEIY 221


>tpg|DAA05917.1| TPA_inf: chloroplast photosystem II 22 kDa PsbS protein precursor
           psbS [Acetabularia acetabulum]
          Length = 243

 Score =  142 bits (359), Expect = 2e-31
 Identities = 94/223 (42%), Positives = 124/223 (55%), Gaps = 2/223 (0%)
 Frame = +1

Query: 106 MLANMQTTNLSSK--GAFTSSRPMLPTQSRLPARSASKVIAMAKNPLQKTFKSKVSYDSN 279
           ML+ M +T    K   AF      L  QSR    + +K     +N   + F  ++  D++
Sbjct: 1   MLSTMNSTYFGGKIFTAFPVVISSLKRQSRTTVAAINKKGGKQQNVKGQRFDVQIGKDTS 60

Query: 280 EYQTNPAQSAFTRRREIFVGRTAMTGFFTCVIGELITGKGAIGQLNLETSLPPFALKAGL 459
                P    FT+  E+FVGR AM GF + +IGEL+TGKGA+ Q  LET +P    +  +
Sbjct: 61  V----PVTLGFTKSNELFVGRLAMIGFASAIIGELLTGKGALAQFGLETGIPITDTEPLV 116

Query: 460 LAIVGFNLVTALLPNATFSDENQKDVRKRPAGGVQKPGKKNLISDPQGTLGISESGFGFT 639
           + +V FNLV ALLP       + ++  +RP G +Q P     I  P   LGI  SGFGFT
Sbjct: 117 IGLVIFNLVAALLPAKGVFVPSDEEEEERPKGSLQDPSIS--ILQPLKFLGI--SGFGFT 172

Query: 640 KKNELFVGRVAMLGFSAELIGEELTGGKGPLAQIGVPLGQPLN 768
           K NELFVGRVA LGF+  LIGE +T GKGPLAQ  +  G PL+
Sbjct: 173 KANELFVGRVAQLGFAFALIGEAVT-GKGPLAQFDIETGLPLS 214



 Score = 60.5 bits (145), Expect = 1e-06
 Identities = 32/73 (43%), Positives = 42/73 (57%), Gaps = 1/73 (1%)
 Frame = +1

Query: 310 FTRRREIFVGRTAMTGFFTCVIGELITGKGAIGQLNLETSLPPFALKAGLLAIVGFNLVT 489
           FT+  E+FVGR A  GF   +IGE +TGKG + Q ++ET LP    +  LLA + F L  
Sbjct: 171 FTKANELFVGRVAQLGFAFALIGEAVTGKGPLAQFDIETGLPLSDTEPLLLAFIAFTLFA 230

Query: 490 ALLP-NATFSDEN 525
           A+     TF  EN
Sbjct: 231 AINEGTGTFEQEN 243


>tpg|DAA05916.1| TPA_inf: chloroplast photosystem II 22 kDa PsbS protein precursor
           psbS [Acetabularia acetabulum]
          Length = 242

 Score =  140 bits (353), Expect = 1e-30
 Identities = 93/222 (41%), Positives = 122/222 (54%), Gaps = 2/222 (0%)
 Frame = +1

Query: 106 MLANMQTTNLSSK--GAFTSSRPMLPTQSRLPARSASKVIAMAKNPLQKTFKSKVSYDSN 279
           ML+ M +     K   AF      L  QSR    + +K     +N   + F  ++S D++
Sbjct: 1   MLSTMNSIYFGGKIRTAFPVVISSLKRQSRTTVAAINKKGGKQQNVKGQRFDVQISKDTS 60

Query: 280 EYQTNPAQSAFTRRREIFVGRTAMTGFFTCVIGELITGKGAIGQLNLETSLPPFALKAGL 459
                P    FT+  E+FVGR AM GF + +IGEL+TGKGA+ Q  LET +P    +  +
Sbjct: 61  V----PVTLGFTKSNELFVGRLAMIGFASAIIGELLTGKGALAQFGLETGIPITDTEPLV 116

Query: 460 LAIVGFNLVTALLPNATFSDENQKDVRKRPAGGVQKPGKKNLISDPQGTLGISESGFGFT 639
           + +V FNLV ALLP       + ++  + P G +Q P     I  PQ   GI  SGFGFT
Sbjct: 117 IGLVIFNLVAALLPAKGVFVPSDEEEEEGPKGSLQDPSIS--ILQPQKFFGI--SGFGFT 172

Query: 640 KKNELFVGRVAMLGFSAELIGEELTGGKGPLAQIGVPLGQPL 765
           K NELFVGRVA LGF+  LIGE +T GKGPLAQ  +  G PL
Sbjct: 173 KANELFVGRVAQLGFAFALIGEAIT-GKGPLAQFDIETGLPL 213



 Score = 57.8 bits (138), Expect = 8e-06
 Identities = 31/72 (43%), Positives = 42/72 (58%), Gaps = 1/72 (1%)
 Frame = +1

Query: 310 FTRRREIFVGRTAMTGFFTCVIGELITGKGAIGQLNLETSLPPFALKAGLLAIVGFNLVT 489
           FT+  E+FVGR A  GF   +IGE ITGKG + Q ++ET LP    +  LL  + F L  
Sbjct: 171 FTKANELFVGRVAQLGFAFALIGEAITGKGPLAQFDIETGLPLADTEPLLLVFIAFTLFA 230

Query: 490 ALLP-NATFSDE 522
           A+   +  F+DE
Sbjct: 231 AINEGSGRFTDE 242


>ref|XP_002955730.1| hypothetical protein VOLCADRAFT_83375 [Volvox carteri f.
           nagariensis] gi|300258923|gb|EFJ43155.1| hypothetical
           protein VOLCADRAFT_83375 [Volvox carteri f. nagariensis]
          Length = 241

 Score =  133 bits (335), Expect = 1e-28
 Identities = 74/169 (43%), Positives = 105/169 (62%), Gaps = 1/169 (0%)
 Frame = +1

Query: 295 PAQSAFTRRREIFVGRTAMTGFFTCVIGELITGKGAIGQLNLETSLPPFALKAGLLAIVG 474
           P +  FT+  E+FVGR AM GF + +IGE++TGKG + Q   ET L    +   ++ +V 
Sbjct: 59  PIKLGFTKTNELFVGRLAMLGFASSLIGEILTGKGPLAQFGYETGLNGIEVDGLIIGLVA 118

Query: 475 FNLVTALLPNA-TFSDENQKDVRKRPAGGVQKPGKKNLISDPQGTLGISESGFGFTKKNE 651
           FNL+ A+LP + TF  E Q+ ++ RPAG +Q P  +  + DP+   G+   GFGFTK+NE
Sbjct: 119 FNLIAAVLPTSQTFVPEEQQSIQDRPAGPLQDP--RISLLDPKRFFGV--KGFGFTKENE 174

Query: 652 LFVGRVAMLGFSAELIGEELTGGKGPLAQIGVPLGQPLNKEIAGAALFL 798
           LFVGR+A LGF+  +IG E+T GKG LAQ  +  G  L     G  +F+
Sbjct: 175 LFVGRMAQLGFAFSIIG-EVTTGKGALAQFDIETGLSLRDTEFGLVVFI 222


>ref|XP_001689923.1| chloroplast photosystem II-associated 22 kDa protein [Chlamydomonas
           reinhardtii] gi|158283911|gb|EDP09661.1| chloroplast
           photosystem II-associated 22 kDa protein [Chlamydomonas
           reinhardtii]
          Length = 245

 Score =  133 bits (334), Expect = 2e-28
 Identities = 74/169 (43%), Positives = 103/169 (60%), Gaps = 1/169 (0%)
 Frame = +1

Query: 295 PAQSAFTRRREIFVGRTAMTGFFTCVIGELITGKGAIGQLNLETSLPPFALKAGLLAIVG 474
           P +  FT+  E+FVGR AM GF   +IGE++TGKGA+ Q   ET L    +   ++ ++ 
Sbjct: 61  PLKLGFTKTNELFVGRLAMVGFSASLIGEILTGKGALAQFGYETGLNGIEVDGLVIGLIA 120

Query: 475 FNLVTALLPNA-TFSDENQKDVRKRPAGGVQKPGKKNLISDPQGTLGISESGFGFTKKNE 651
           FNL+ A+LP + TF  E Q  + +RPAG +Q P  +  + +P+   G+   GFGFTK+NE
Sbjct: 121 FNLIAAVLPTSQTFVPEEQDTISERPAGPLQDP--RITLLEPKKFFGV--QGFGFTKENE 176

Query: 652 LFVGRVAMLGFSAELIGEELTGGKGPLAQIGVPLGQPLNKEIAGAALFL 798
           LFVGR A LGF+  LIGE +T GKG LAQ  +  G  L     G  +F+
Sbjct: 177 LFVGRAAQLGFAFSLIGEAVT-GKGALAQFDIETGLSLRDTEFGLVVFI 224


>ref|XP_001689476.1| chloroplast photosystem II-associated 22 kDa protein [Chlamydomonas
           reinhardtii] gi|158283464|gb|EDP09214.1| chloroplast
           photosystem II-associated 22 kDa protein [Chlamydomonas
           reinhardtii]
          Length = 245

 Score =  133 bits (334), Expect = 2e-28
 Identities = 74/169 (43%), Positives = 103/169 (60%), Gaps = 1/169 (0%)
 Frame = +1

Query: 295 PAQSAFTRRREIFVGRTAMTGFFTCVIGELITGKGAIGQLNLETSLPPFALKAGLLAIVG 474
           P +  FT+  E+FVGR AM GF   +IGE++TGKGA+ Q   ET L    +   ++ ++ 
Sbjct: 61  PLKLGFTKTNELFVGRLAMVGFSASLIGEILTGKGALAQFGYETGLNGIEVDGLVIGLIA 120

Query: 475 FNLVTALLPNA-TFSDENQKDVRKRPAGGVQKPGKKNLISDPQGTLGISESGFGFTKKNE 651
           FNL+ A+LP + TF  E Q  + +RPAG +Q P  +  + +P+   G+   GFGFTK+NE
Sbjct: 121 FNLIAAVLPTSQTFVPEEQDTISERPAGPLQDP--RITLLEPKKFFGV--QGFGFTKENE 176

Query: 652 LFVGRVAMLGFSAELIGEELTGGKGPLAQIGVPLGQPLNKEIAGAALFL 798
           LFVGR A LGF+  LIGE +T GKG LAQ  +  G  L     G  +F+
Sbjct: 177 LFVGRAAQLGFAFSLIGEAVT-GKGALAQFDIETGLSLRDTEFGLVVFI 224


>gb|AFW18037.1| chloroplast photosystem II subunit S [Ulva prolifera]
          Length = 244

 Score =  132 bits (332), Expect = 3e-28
 Identities = 83/226 (36%), Positives = 123/226 (54%), Gaps = 2/226 (0%)
 Frame = +1

Query: 100 MSMLANMQTTNLSSKGAFTSSRPMLPTQSRLPARSASKVIAMAKNPLQKT-FKSKVSYDS 276
           M+    +   + S++G  T       T + +P +   +V++  ++ +  T F+ ++   +
Sbjct: 1   MAFCTGISPASTSTRG-LTMRAQAAKTSTNIPGKGKGRVVSNQRDDINATQFQVRLGKST 59

Query: 277 NEYQTNPAQSAFTRRREIFVGRTAMTGFFTCVIGELITGKGAIGQLNLETSLPPFALKAG 456
               T P    FT+  E+FVGR AM G     IGE+ITGKG +GQL++ET      +   
Sbjct: 60  ----TVPVTLGFTKNNELFVGRMAMLGVAFAAIGEVITGKGPLGQLSIETGSSITDIDGA 115

Query: 457 LLAIVGFNLVTALLPNATFSDENQKDVRKRPAGGVQKPGKKNLISDPQGTLGISESGFGF 636
           +L ++ FNL+ ALLP        + +   RP G +Q P     +  P+   GI  SGFGF
Sbjct: 116 VLFLIAFNLIAALLPAKGKLVLPEDEFEARPKGSLQDPSVS--VLQPKKFFGI--SGFGF 171

Query: 637 TKKNELFVGRVAMLGFSAELIGEE-LTGGKGPLAQIGVPLGQPLNK 771
           TK+NELFVGR+A LGF+A L+GE  L G  GPL QIG   G PL++
Sbjct: 172 TKENELFVGRMAQLGFAAMLLGETLLPGDLGPLGQIGFTTGVPLSE 217


>ref|XP_005643692.1| hypothetical protein COCSUDRAFT_59631 [Coccomyxa subellipsoidea
           C-169] gi|384245655|gb|EIE19148.1| hypothetical protein
           COCSUDRAFT_59631 [Coccomyxa subellipsoidea C-169]
          Length = 248

 Score =  130 bits (328), Expect = 8e-28
 Identities = 87/212 (41%), Positives = 118/212 (55%), Gaps = 2/212 (0%)
 Frame = +1

Query: 142 KGAFTSSRPMLPTQSRLPARSASKVIAMAKNPLQKTFKS-KVSYDSNEYQTNPAQSAFTR 318
           + +FT SR  L    +   +SA ++   A     K  K  K  YD   ++ +P Q AFTR
Sbjct: 24  RSSFTGSRTALAPVIKF-RQSARQITPQALFTRNKEDKGRKTGYDKGAFEVDPIQPAFTR 82

Query: 319 RREIFVGRTAMTGFFTCVIGELITGKGAIGQLNLETSLPPFALKAGLLAIVGFNLVTALL 498
           RRE+FV               + TG G +GQL LE  LP +A+   +L  V ++ +  L 
Sbjct: 83  RRELFV---------------ISTGLGPLGQLQLELGLPSYAVDLLVLGTVAYSFIGGLN 127

Query: 499 PNA-TFSDENQKDVRKRPAGGVQKPGKKNLISDPQGTLGISESGFGFTKKNELFVGRVAM 675
           P + TFS  NQ+DV+KR AG  QKP + N +S+P    G +E  FGF+KKNEL VGR A 
Sbjct: 128 PKSPTFSAANQRDVKKRGAGPTQKP-QINAVSNPGDMFGATE--FGFSKKNELLVGRTAQ 184

Query: 676 LGFSAELIGEELTGGKGPLAQIGVPLGQPLNK 771
           LGF A +IGE++T G GPL Q G+  G PL +
Sbjct: 185 LGFLAAVIGEKVT-GFGPLKQFGLETGIPLGQ 215



 Score = 59.3 bits (142), Expect = 3e-06
 Identities = 40/119 (33%), Positives = 56/119 (47%)
 Frame = +1

Query: 166 PMLPTQSRLPARSASKVIAMAKNPLQKTFKSKVSYDSNEYQTNPAQSAFTRRREIFVGRT 345
           P  PT S    R   K       P QK   + VS   + +     +  F+++ E+ VGRT
Sbjct: 128 PKSPTFSAANQRDVKK---RGAGPTQKPQINAVSNPGDMF--GATEFGFSKKNELLVGRT 182

Query: 346 AMTGFFTCVIGELITGKGAIGQLNLETSLPPFALKAGLLAIVGFNLVTALLPNATFSDE 522
           A  GF   VIGE +TG G + Q  LET +P       L+A + F LV A+  N  + D+
Sbjct: 183 AQLGFLAAVIGEKVTGFGPLKQFGLETGIPLGQASVLLVAFISFFLVAAIF-NGEYGDK 240


>gb|AER58182.1| chloroplast photosystem II subunit S [Ulva linza]
          Length = 243

 Score =  129 bits (325), Expect = 2e-27
 Identities = 79/198 (39%), Positives = 113/198 (57%), Gaps = 2/198 (1%)
 Frame = +1

Query: 184 SRLPARSASKVIAMAKNPLQKT-FKSKVSYDSNEYQTNPAQSAFTRRREIFVGRTAMTGF 360
           S +P +   +V++  ++ +  T F+ ++   +    T P    FT+  E+FVGR AM G 
Sbjct: 27  SNIPGKGKGRVVSNQRDDVNATQFQVRLGKST----TRPVTLGFTKNNELFVGRMAMLGV 82

Query: 361 FTCVIGELITGKGAIGQLNLETSLPPFALKAGLLAIVGFNLVTALLPNATFSDENQKDVR 540
               IGE+ITGKG +GQL++ET      +   +L ++ FNL+ ALLP        + +  
Sbjct: 83  AFAAIGEVITGKGPLGQLSIETGSSITDIDGAVLFLIVFNLIAALLPAKGKLVLPEDEFE 142

Query: 541 KRPAGGVQKPGKKNLISDPQGTLGISESGFGFTKKNELFVGRVAMLGFSAELIGEE-LTG 717
            RP G +Q P     +  P+   GI  SGFGFTK+NELFVGR+A LGF+A L+GE  L G
Sbjct: 143 ARPKGSLQDPSVS--VLQPKKFFGI--SGFGFTKENELFVGRMAQLGFAAMLLGETLLPG 198

Query: 718 GKGPLAQIGVPLGQPLNK 771
             GPL QIG   G PL++
Sbjct: 199 DLGPLGQIGFTTGVPLSE 216


>gb|AFK43146.1| unknown [Lotus japonicus]
          Length = 273

 Score =  128 bits (322), Expect = 4e-27
 Identities = 94/238 (39%), Positives = 128/238 (53%), Gaps = 9/238 (3%)
 Frame = +1

Query: 109 LANMQTTNLSSKGAFTSSRPMLPTQSRLPARSASKVIAM----AKNPLQKTFKSKVSYDS 276
           L ++Q+  L  K +  S  P LP+ S L +      +A+    AK P  K  K K   + 
Sbjct: 24  LLHLQSQRLRPKFSQLSFNP-LPSNSSLFSSRTFTTLALFKSKAKAPPPKVVKQKPKVED 82

Query: 277 NEYQTNPAQSAFTRRREIFVGRTAMTGFFTCVIGELITGKGAIGQLNLETSLPPFALKAG 456
             + T+     FT++ E+FVGR AM GF   ++GE +TGKG + QLNLET +P +  +  
Sbjct: 83  GVFGTSGG-IGFTKQNELFVGRVAMIGFAASLLGEALTGKGILAQLNLETGIPIYEAEPL 141

Query: 457 LLAIVGFNLVTALLPNATFSDENQKDVRKRPAG---GVQKPGKKNLISDPQGTLGISESG 627
           LL  + F L+ A+       D  +    + P G    V  PGK       +G LG+SE G
Sbjct: 142 LLFFILFTLLGAI---GALGDRGKFVDDESPTGLDKAVIPPGK-----GLRGALGLSEGG 193

Query: 628 --FGFTKKNELFVGRVAMLGFSAELIGEELTGGKGPLAQIGVPLGQPLNKEIAGAALF 795
             FGFTK NELFVGR+A LGF+  LIGE +T GKG LAQ+ +  G P+N EI    LF
Sbjct: 194 PLFGFTKSNELFVGRLAQLGFAFSLIGEIIT-GKGALAQLNIETGIPIN-EIEPLVLF 249



 Score = 61.6 bits (148), Expect = 6e-07
 Identities = 31/64 (48%), Positives = 42/64 (65%)
 Frame = +1

Query: 310 FTRRREIFVGRTAMTGFFTCVIGELITGKGAIGQLNLETSLPPFALKAGLLAIVGFNLVT 489
           FT+  E+FVGR A  GF   +IGE+ITGKGA+ QLN+ET +P   ++  +L  V F  + 
Sbjct: 198 FTKSNELFVGRLAQLGFAFSLIGEIITGKGALAQLNIETGIPINEIEPLVLFNVAFFFIA 257

Query: 490 ALLP 501
           AL P
Sbjct: 258 ALNP 261


>gb|EXC10209.1| hypothetical protein L484_004387 [Morus notabilis]
          Length = 280

 Score =  124 bits (311), Expect = 7e-26
 Identities = 87/216 (40%), Positives = 117/216 (54%), Gaps = 10/216 (4%)
 Frame = +1

Query: 154 TSSRPMLPTQSRLPARSASKVIAMAKN-----PLQKTFKSKVSYDSNEYQTNPAQSAFTR 318
           +S  P L + S   +R  S V A+ K+     P +K  K K   +   + T+     FT+
Sbjct: 47  SSRNPSLASSS---SRGISTVFALFKSKTKAAPTKKVVKEKPKVEDGIFGTSGG-IGFTK 102

Query: 319 RREIFVGRTAMTGFFTCVIGELITGKGAIGQLNLETSLPPFALKAGLLAIVGFNL---VT 489
           + E+FVGR AM GF   ++GE ITGKG + QLNLET +P +  +  LL  + F L   + 
Sbjct: 103 QNELFVGRVAMIGFAAALLGEAITGKGILSQLNLETGIPIYEAEPLLLFFILFTLLGAIG 162

Query: 490 ALLPNATFSDENQKDVRKRPAGGVQKPGKKNLISDPQGTLGISESG--FGFTKKNELFVG 663
           AL     F D+    +     G V  PGK       +  LG+ E G  FGFTK NELFVG
Sbjct: 163 ALGDRGRFVDDPPTGIE----GAVIPPGK-----SLRSALGLKEGGPLFGFTKANELFVG 213

Query: 664 RVAMLGFSAELIGEELTGGKGPLAQIGVPLGQPLNK 771
           R+A LGF+  LIGE +T GKG LAQ+ V  G P+N+
Sbjct: 214 RLAQLGFAFALIGEIIT-GKGALAQLNVETGVPINE 248



 Score = 63.5 bits (153), Expect = 2e-07
 Identities = 34/77 (44%), Positives = 49/77 (63%), Gaps = 2/77 (2%)
 Frame = +1

Query: 310 FTRRREIFVGRTAMTGFFTCVIGELITGKGAIGQLNLETSLPPFALKAGLLAIVGFNLVT 489
           FT+  E+FVGR A  GF   +IGE+ITGKGA+ QLN+ET +P   ++  +L  V F  + 
Sbjct: 204 FTKANELFVGRLAQLGFAFALIGEIITGKGALAQLNVETGVPINEIEPLVLLNVLFFFIA 263

Query: 490 ALLPNA--TFSDENQKD 534
           A+ P      +DEN++D
Sbjct: 264 AVNPGTGKFITDENEED 280


>ref|XP_004502468.1| PREDICTED: photosystem II 22 kDa protein, chloroplastic-like [Cicer
           arietinum]
          Length = 269

 Score =  124 bits (311), Expect = 7e-26
 Identities = 89/234 (38%), Positives = 123/234 (52%), Gaps = 5/234 (2%)
 Frame = +1

Query: 109 LANMQTTNLSSKGAFTSSRPMLPTQSRLPARSASKVI---AMAKNPLQKTFKSKVSYDSN 279
           L  +Q   L  K +  S  P+        +R+ + +    + AK P  K  K K   +  
Sbjct: 24  LLQLQCQRLRPKFSDISFNPLNSNSKSFSSRTFTTLALFKSKAKAP-PKVVKPKPKVEDG 82

Query: 280 EYQTNPAQSAFTRRREIFVGRTAMTGFFTCVIGELITGKGAIGQLNLETSLPPFALKAGL 459
            + T+     FT++ E+FVGR AM GF   ++GE +TGKG + QLNLET +P +  +  L
Sbjct: 83  VFGTSGG-FGFTKQNELFVGRVAMIGFAASILGEAVTGKGILAQLNLETGIPIYEAEPLL 141

Query: 460 LAIVGFNLVTALLPNATFSDENQKDVRKRPAGGVQKPGKKNLISDPQGTLGISESG--FG 633
           L  + F L+ A+       D  +    +   GGV  PGK       +  LG+SE G  FG
Sbjct: 142 LFFIIFTLLGAI---GALGDRGKFVDDEPNTGGVIPPGK-----GFRSALGLSEGGPLFG 193

Query: 634 FTKKNELFVGRVAMLGFSAELIGEELTGGKGPLAQIGVPLGQPLNKEIAGAALF 795
           FTK NELFVGR+A LGF+  LIGE +T GKG LAQ+ +  G P+N EI    LF
Sbjct: 194 FTKSNELFVGRLAQLGFAFSLIGEIIT-GKGALAQLNIETGVPIN-EIEPLVLF 245



 Score = 61.6 bits (148), Expect = 6e-07
 Identities = 32/64 (50%), Positives = 42/64 (65%)
 Frame = +1

Query: 310 FTRRREIFVGRTAMTGFFTCVIGELITGKGAIGQLNLETSLPPFALKAGLLAIVGFNLVT 489
           FT+  E+FVGR A  GF   +IGE+ITGKGA+ QLN+ET +P   ++  +L  V F  V 
Sbjct: 194 FTKSNELFVGRLAQLGFAFSLIGEIITGKGALAQLNIETGVPINEIEPLVLFNVAFFFVA 253

Query: 490 ALLP 501
           AL P
Sbjct: 254 ALNP 257


>ref|XP_005644173.1| hypothetical protein COCSUDRAFT_19247, partial [Coccomyxa
           subellipsoidea C-169] gi|384246138|gb|EIE19629.1|
           hypothetical protein COCSUDRAFT_19247, partial
           [Coccomyxa subellipsoidea C-169]
          Length = 182

 Score =  123 bits (309), Expect = 1e-25
 Identities = 75/152 (49%), Positives = 95/152 (62%)
 Frame = +1

Query: 310 FTRRREIFVGRTAMTGFFTCVIGELITGKGAIGQLNLETSLPPFALKAGLLAIVGFNLVT 489
           FT+  E+FV R AM G  T +IGEL+TGKGA+ QL  ET LP   L   +L I+ FNL+ 
Sbjct: 5   FTKSNELFVSRAAMIGVATSIIGELLTGKGALQQLGFETGLPIQELDGIVLFIIAFNLIA 64

Query: 490 ALLPNATFSDENQKDVRKRPAGGVQKPGKKNLISDPQGTLGISESGFGFTKKNELFVGRV 669
           ALLP       +++++  RP G +Q   K +L++ P    GI   G GFTK NELF GR+
Sbjct: 65  ALLPAKGTFVPDEEELTPRPKGALQ-DSKVSLVT-PGKFFGI--KGLGFTKANELFAGRL 120

Query: 670 AMLGFSAELIGEELTGGKGPLAQIGVPLGQPL 765
           A LGF+A LIGE LT GKG L Q+ V  G PL
Sbjct: 121 AQLGFAASLIGEGLT-GKGILGQLNVETGIPL 151


>gb|AHM26637.1| photosystem II 22 kDa protein [Pyrus x bretschneideri]
          Length = 274

 Score =  123 bits (308), Expect = 2e-25
 Identities = 84/208 (40%), Positives = 116/208 (55%), Gaps = 9/208 (4%)
 Frame = +1

Query: 175 PTQSRLPARSASKVIAMAKN----PLQKTFKSKVSYDSNEYQTNPAQSAFTRRREIFVGR 342
           P  S   A S+S V+A+ K+    P +K    K   +   + T+     FT++ E+FVGR
Sbjct: 46  PLPSSSFASSSSTVVALFKSKTKAPAKKAPSPKPKVEDGIFGTSGG-IGFTKQNELFVGR 104

Query: 343 TAMTGFFTCVIGELITGKGAIGQLNLETSLPPFALKAGLLAIVGFNL---VTALLPNATF 513
            AM GF   ++GE ITGKG + QLNLET +P +  +  LL  + F L   + AL     F
Sbjct: 105 VAMIGFAASLLGEAITGKGILSQLNLETGVPIYEAEPLLLFFILFTLLGAIGALGDRGRF 164

Query: 514 SDENQKDVRKRPAGGVQKPGKKNLISDPQGTLGISESG--FGFTKKNELFVGRVAMLGFS 687
            D+    +     G V +PGK       +  LG++E G  FGFTK NELFVGR+A LGF+
Sbjct: 165 VDDPPTGIE----GAVIRPGK-----GLKSALGLNEGGPLFGFTKANELFVGRLAQLGFA 215

Query: 688 AELIGEELTGGKGPLAQIGVPLGQPLNK 771
             LIGE +T GKG LAQ+ +  G P+N+
Sbjct: 216 FSLIGEIIT-GKGALAQLNIETGVPINE 242



 Score = 59.3 bits (142), Expect = 3e-06
 Identities = 30/64 (46%), Positives = 42/64 (65%)
 Frame = +1

Query: 310 FTRRREIFVGRTAMTGFFTCVIGELITGKGAIGQLNLETSLPPFALKAGLLAIVGFNLVT 489
           FT+  E+FVGR A  GF   +IGE+ITGKGA+ QLN+ET +P   ++  +L  V F  + 
Sbjct: 198 FTKANELFVGRLAQLGFAFSLIGEIITGKGALAQLNIETGVPINEIEPLVLLNVVFFFIA 257

Query: 490 ALLP 501
           A+ P
Sbjct: 258 AVNP 261


>tpg|DAA56631.1| TPA: photosystem II protein [Zea mays]
          Length = 272

 Score =  122 bits (306), Expect = 3e-25
 Identities = 89/251 (35%), Positives = 130/251 (51%), Gaps = 27/251 (10%)
 Frame = +1

Query: 100 MSMLANMQTTNLSSKGAFTSSRPMLPTQ-SRLPARSASKVIAMAKNPLQKTFKSKVSYDS 276
           M+  + + +T+++   A  S + + P    RLP  S+S   A  ++    + K+   +  
Sbjct: 1   MAAQSMLMSTSVNGGRALPSLQAVRPAPYPRLPLPSSSSSSAGYRHSKSVSVKTLALFGK 60

Query: 277 NEYQTNPAQSA---------------------FTRRREIFVGRTAMTGFFTCVIGELITG 393
           ++ +T PA+ A                     FT+  E+FVGR AM GF   ++GE ITG
Sbjct: 61  SKVKTAPAKKAAAPKPKPKVEDGIFGTSGGIGFTKENELFVGRVAMLGFAASLLGEAITG 120

Query: 394 KGAIGQLNLETSLPPFALKAGLLAIVGFNL---VTALLPNATFSDENQKDVRKRPAGGVQ 564
           KG + QLNLET +P +  +  LL  + F L   + AL     F DE    + K     V 
Sbjct: 121 KGILAQLNLETGIPIYEAEPLLLFFILFTLLGAIGALGDRGRFVDEEVTGLDK----AVI 176

Query: 565 KPGKKNLISDPQGTLGISESG--FGFTKKNELFVGRVAMLGFSAELIGEELTGGKGPLAQ 738
           +PGK       +G LG+SE G  FGFTK NELFVGR+A LG +  +IGE +T GKG LAQ
Sbjct: 177 QPGK-----GFRGALGLSEGGPLFGFTKSNELFVGRMAQLGVAFSIIGEIIT-GKGALAQ 230

Query: 739 IGVPLGQPLNK 771
           + +  G P+N+
Sbjct: 231 LNIETGVPINE 241


>gb|AEK26371.1| chloroplast photosystem II subunit [Sedum alfredii]
          Length = 273

 Score =  121 bits (304), Expect = 5e-25
 Identities = 87/221 (39%), Positives = 120/221 (54%), Gaps = 11/221 (4%)
 Frame = +1

Query: 166 PMLPTQSRLPARSASKVIAM----AKNPLQKTFKSK--VSYDSNEYQTNPAQSAFTRRRE 327
           P+L +++  P       +A+    AK P +K  KSK  +  +   + T+     FT++ E
Sbjct: 41  PLLHSKASSPLGLGFTTVALFKAKAKAPAKKETKSKPKLKVEDGVFGTSGG-IGFTKQNE 99

Query: 328 IFVGRTAMTGFFTCVIGELITGKGAIGQLNLETSLPPFALKAGLLAIVGFNL---VTALL 498
           +FVGR AM GF   ++GE +TGKG + QLNLET +P +  +  LL  + F L   + AL 
Sbjct: 100 LFVGRVAMIGFAASILGEAVTGKGILAQLNLETGIPIYEAEPLLLFFILFTLLGAIGALG 159

Query: 499 PNATFSDENQKDVRKRPAGGVQKPGKKNLISDPQGTLGISESG--FGFTKKNELFVGRVA 672
               F D+    + K     V  PGK       +   G+SE G  FGFTK NELFVGR+A
Sbjct: 160 DRGRFVDDPPTGLEK----AVIPPGK-----GLRSAFGLSEGGPLFGFTKSNELFVGRLA 210

Query: 673 MLGFSAELIGEELTGGKGPLAQIGVPLGQPLNKEIAGAALF 795
            LGF+  LIGE +T GKG LAQ+ +  G P+N EI    LF
Sbjct: 211 QLGFAFSLIGEIIT-GKGALAQLNIETGVPIN-EIEPLVLF 249



 Score = 58.9 bits (141), Expect = 4e-06
 Identities = 33/76 (43%), Positives = 47/76 (61%), Gaps = 1/76 (1%)
 Frame = +1

Query: 310 FTRRREIFVGRTAMTGFFTCVIGELITGKGAIGQLNLETSLPPFALKAGLLAIVGFNLVT 489
           FT+  E+FVGR A  GF   +IGE+ITGKGA+ QLN+ET +P   ++  +L  V F    
Sbjct: 198 FTKSNELFVGRLAQLGFAFSLIGEIITGKGALAQLNIETGVPINEIEPLVLFNVIFFFFA 257

Query: 490 ALLP-NATFSDENQKD 534
           AL P    F  ++++D
Sbjct: 258 ALNPGTGKFVTDDEED 273


>ref|XP_004150442.1| PREDICTED: photosystem II 22 kDa protein, chloroplastic-like
           [Cucumis sativus] gi|449529497|ref|XP_004171736.1|
           PREDICTED: photosystem II 22 kDa protein,
           chloroplastic-like [Cucumis sativus]
          Length = 272

 Score =  121 bits (303), Expect = 6e-25
 Identities = 83/210 (39%), Positives = 115/210 (54%), Gaps = 10/210 (4%)
 Frame = +1

Query: 172 LPTQS-RLPARSASKVIAM---AKNPLQKTFKSKVSYDSNEYQTNPAQSAFTRRREIFVG 339
           LP+ S  LP R  + +       K P +K  K K   +   + T+     FT++ E+FVG
Sbjct: 41  LPSHSVSLPPRGFTTLAVFKSRTKAPPKKVEKPKQKVEDGIFGTSGG-IGFTKQNELFVG 99

Query: 340 RTAMTGFFTCVIGELITGKGAIGQLNLETSLPPFALKAGLLAIVGFNLVTALLPNATFSD 519
           R AM GF   ++GE ITGKG + QLNLET +P +  +  LL  + F L+ A+       D
Sbjct: 100 RVAMIGFAASILGEAITGKGILAQLNLETGIPIYEAEPLLLFFILFTLLGAI---GALGD 156

Query: 520 ENQKDVRKRPAGGVQK----PGKKNLISDPQGTLGISESG--FGFTKKNELFVGRVAMLG 681
             +      PA G+++    PGK       +  LG+ E G  FGFTK NELFVGR+A LG
Sbjct: 157 RGKFIDDPEPATGLERAVIPPGKSF-----RSALGLKEGGPLFGFTKANELFVGRLAQLG 211

Query: 682 FSAELIGEELTGGKGPLAQIGVPLGQPLNK 771
           F+  LIGE +T GKG LAQ+ +  G P+N+
Sbjct: 212 FAFSLIGEIIT-GKGALAQLNIETGVPINE 240



 Score = 59.3 bits (142), Expect = 3e-06
 Identities = 30/64 (46%), Positives = 42/64 (65%)
 Frame = +1

Query: 310 FTRRREIFVGRTAMTGFFTCVIGELITGKGAIGQLNLETSLPPFALKAGLLAIVGFNLVT 489
           FT+  E+FVGR A  GF   +IGE+ITGKGA+ QLN+ET +P   ++  +L  V F  + 
Sbjct: 196 FTKANELFVGRLAQLGFAFSLIGEIITGKGALAQLNIETGVPINEIEPLVLLNVVFFFIA 255

Query: 490 ALLP 501
           A+ P
Sbjct: 256 AVNP 259


>ref|XP_004290871.1| PREDICTED: photosystem II 22 kDa protein, chloroplastic-like
           [Fragaria vesca subsp. vesca]
          Length = 273

 Score =  120 bits (302), Expect = 8e-25
 Identities = 83/206 (40%), Positives = 113/206 (54%), Gaps = 7/206 (3%)
 Frame = +1

Query: 175 PTQSRLPARSASKVIAMAKN----PLQKTFKSKVSYDSNEYQTNPAQSAFTRRREIFVGR 342
           P  S   +  +S V+A+ K+    P++K    K   +S  + T+     FT+  E+FVGR
Sbjct: 47  PLPSSTTSLRSSGVVALFKSKTKAPVKKASPPKPKVESGIFGTSGG-IGFTKENELFVGR 105

Query: 343 TAMTGFFTCVIGELITGKGAIGQLNLETSLPPFALKAGLLAIVGFNLVTALLPNATFSDE 522
            AM GF   ++GE ITGKG + QLNLET +P +  +  LL  + F L+ A+       D 
Sbjct: 106 VAMIGFAASLLGEAITGKGILQQLNLETGIPIYEAEPLLLFFILFTLLGAI---GALGDR 162

Query: 523 NQ-KDVRKRPAGGVQKPGKKNLISDPQGTLGISESG--FGFTKKNELFVGRVAMLGFSAE 693
            Q  D      G V  PGK       +  LG+ E G  FGFTK NELFVGR+A LGF+  
Sbjct: 163 GQFVDDTPGIEGAVIPPGK-----GLKSALGLKEGGPLFGFTKANELFVGRLAQLGFAFS 217

Query: 694 LIGEELTGGKGPLAQIGVPLGQPLNK 771
           LIGE +T GKG LAQ+ +  G P+N+
Sbjct: 218 LIGEIIT-GKGALAQLNIETGVPINE 242



 Score = 58.9 bits (141), Expect = 4e-06
 Identities = 32/76 (42%), Positives = 48/76 (63%), Gaps = 2/76 (2%)
 Frame = +1

Query: 310 FTRRREIFVGRTAMTGFFTCVIGELITGKGAIGQLNLETSLPPFALKAGLLAIVGFNLVT 489
           FT+  E+FVGR A  GF   +IGE+ITGKGA+ QLN+ET +P   ++  +L  V F  + 
Sbjct: 198 FTKANELFVGRLAQLGFAFSLIGEIITGKGALAQLNIETGVPINEIEPLVLLNVVFFFLA 257

Query: 490 ALLPNA--TFSDENQK 531
           A+ P      +DE+++
Sbjct: 258 AVNPGTGKFITDEDEE 273


>sp|Q02060.1|PSBS_SPIOL RecName: Full=Photosystem II 22 kDa protein, chloroplastic;
           AltName: Full=CP22; Flags: Precursor
           gi|21307|emb|CAA48557.1| 22kD-protein of PSII [Spinacia
           oleracea] gi|260917|gb|AAB24338.1| photosystem II 22 kda
           polypeptide [Spinacia oleracea]
          Length = 274

 Score =  120 bits (302), Expect = 8e-25
 Identities = 85/217 (39%), Positives = 116/217 (53%), Gaps = 5/217 (2%)
 Frame = +1

Query: 136 SSKGAFTSSRPMLPTQSRLPARSASKVIAMAKNPLQKTFKSKVSYDSNEYQTNPAQSAFT 315
           S+   F S  P   + S    ++ +   + AK P +K  K K+  +   + T+     FT
Sbjct: 38  STSNLFFSPLPSSSSSSSTVFKTLALFKSKAKAP-KKVEKPKLKVEDGLFGTSGG-IGFT 95

Query: 316 RRREIFVGRTAMTGFFTCVIGELITGKGAIGQLNLETSLPPFALKAGLLAIVGFNL---V 486
           +  E+FVGR AM GF   ++GE ITGKG + QLNLET +P +  +  LL  + F L   +
Sbjct: 96  KENELFVGRVAMIGFAASLLGEGITGKGILSQLNLETGIPIYEAEPLLLFFILFTLLGAI 155

Query: 487 TALLPNATFSDENQKDVRKRPAGGVQKPGKKNLISDPQGTLGISESG--FGFTKKNELFV 660
            AL     F DE    + K     V  PGK     D +  LG+   G  FGFTK NELFV
Sbjct: 156 GALGDRGRFVDEPTTGLEK----AVIPPGK-----DVRSALGLKTKGPLFGFTKSNELFV 206

Query: 661 GRVAMLGFSAELIGEELTGGKGPLAQIGVPLGQPLNK 771
           GR+A LGF+  LIGE +T GKG LAQ+ +  G P+N+
Sbjct: 207 GRLAQLGFAFSLIGEIIT-GKGALAQLNIETGVPINE 242



 Score = 60.8 bits (146), Expect = 1e-06
 Identities = 32/77 (41%), Positives = 48/77 (62%), Gaps = 2/77 (2%)
 Frame = +1

Query: 310 FTRRREIFVGRTAMTGFFTCVIGELITGKGAIGQLNLETSLPPFALKAGLLAIVGFNLVT 489
           FT+  E+FVGR A  GF   +IGE+ITGKGA+ QLN+ET +P   ++  +L  V F  + 
Sbjct: 198 FTKSNELFVGRLAQLGFAFSLIGEIITGKGALAQLNIETGVPINEIEPLVLLNVVFFFIA 257

Query: 490 ALLPNA--TFSDENQKD 534
           A+ P      +D+ ++D
Sbjct: 258 AINPGTGKFITDDEEED 274


>ref|XP_003602031.1| Photosystem II 22 kDa protein [Medicago truncatula]
           gi|355491079|gb|AES72282.1| Photosystem II 22 kDa
           protein [Medicago truncatula]
           gi|388508062|gb|AFK42097.1| unknown [Medicago
           truncatula]
          Length = 270

 Score =  120 bits (302), Expect = 8e-25
 Identities = 88/235 (37%), Positives = 123/235 (52%), Gaps = 6/235 (2%)
 Frame = +1

Query: 109 LANMQTTNLSSKGAFTSSRPMLPTQSRLPARSASKVIAMAKN----PLQKTFKSKVSYDS 276
           L  +Q   L  + +  S  P LP+ S+  +      +A+ K+    P +   K K   + 
Sbjct: 24  LLQLQCQRLRPRFSDVSFNP-LPSNSKCFSSRTFTTLALFKSKTKAPAKVVKKPKPKVED 82

Query: 277 NEYQTNPAQSAFTRRREIFVGRTAMTGFFTCVIGELITGKGAIGQLNLETSLPPFALKAG 456
             + T+     FT++ E+FVGR AM GF   ++GE +TGKG + QLNLET +P +  +  
Sbjct: 83  GIFGTSGG-FGFTKQNELFVGRVAMIGFAASILGEALTGKGILAQLNLETGIPIYEAEPL 141

Query: 457 LLAIVGFNLVTALLPNATFSDENQKDVRKRPAGGVQKPGKKNLISDPQGTLGISESG--F 630
           LL  + F L+ A+       D  +    +   GGV  PGK       +  LG+SE G  F
Sbjct: 142 LLFFIIFTLLGAI---GALGDRGKFVDDEPNTGGVIPPGK-----GFRSALGLSEGGPLF 193

Query: 631 GFTKKNELFVGRVAMLGFSAELIGEELTGGKGPLAQIGVPLGQPLNKEIAGAALF 795
           GFTK NELFVGR+A LGF   LIGE +T GKG LAQ+ +  G P+  EI    LF
Sbjct: 194 GFTKSNELFVGRLAQLGFVFSLIGEIIT-GKGALAQLNIETGVPIT-EIEPLVLF 246



 Score = 63.5 bits (153), Expect = 2e-07
 Identities = 34/76 (44%), Positives = 49/76 (64%), Gaps = 1/76 (1%)
 Frame = +1

Query: 310 FTRRREIFVGRTAMTGFFTCVIGELITGKGAIGQLNLETSLPPFALKAGLLAIVGFNLVT 489
           FT+  E+FVGR A  GF   +IGE+ITGKGA+ QLN+ET +P   ++  +L  V F  + 
Sbjct: 195 FTKSNELFVGRLAQLGFVFSLIGEIITGKGALAQLNIETGVPITEIEPLVLFNVIFFFIA 254

Query: 490 ALLP-NATFSDENQKD 534
           AL P   TF  ++++D
Sbjct: 255 ALNPGTGTFVTDDEED 270