BLASTX nr result
ID: Akebia27_contig00021406
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Akebia27_contig00021406
(334 letters)
Database: ./nr
38,876,450 sequences; 13,856,398,315 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002324295.1| SILENCING DEFECTIVE 1 family protein [Populu... 84 2e-14
gb|ADG57590.1| RNA-dependent RNA polymerase 6 [Gossypium hirsutu... 80 4e-13
ref|XP_002308662.1| SILENCING DEFECTIVE 1 family protein [Populu... 78 1e-12
ref|XP_004291459.1| PREDICTED: RNA-dependent RNA polymerase 6-li... 72 6e-11
gb|AAF74208.1|AF268093_1 RNA-dependent RNA polymerase [Arabidops... 72 8e-11
ref|NP_190519.1| RNA-dependent RNA polymerase 6 [Arabidopsis tha... 72 8e-11
ref|XP_004160762.1| PREDICTED: RNA-dependent RNA polymerase 6-li... 71 2e-10
ref|NP_001267634.1| RNA-dependent RNA polymerase 6-like [Cucumis... 71 2e-10
ref|XP_002515520.1| RNA-dependent RNA polymerase, putative [Rici... 71 2e-10
ref|XP_006290518.1| hypothetical protein CARUB_v10016597mg [Caps... 70 4e-10
gb|ACO72600.1| RNA-dependent RNA polymerase 6 [Nicotiana glutinosa] 69 5e-10
dbj|BAF96019.1| RNA-dependent RNA polymerase 6 [Nicotiana tabacum] 69 5e-10
ref|XP_004292989.1| PREDICTED: RNA-dependent RNA polymerase 6-li... 69 7e-10
emb|CAR47810.1| RNA-dependent RNA polymerase 6 [Nicotiana tabacum] 69 9e-10
emb|CBI21038.3| unnamed protein product [Vitis vinifera] 68 1e-09
ref|XP_002282647.1| PREDICTED: RNA-dependent RNA polymerase 6 [V... 68 1e-09
gb|ACA13601.1| RNA-dependent RNA polymerase [Nicotiana attenuata] 68 2e-09
gb|ADI52625.1| RNA-dependent RNA polymerase 6 [Nicotiana tabacum] 66 4e-09
gb|AHL27586.1| RNA-dependent RNA polymerase 3 [Salvia miltiorrhiza] 66 6e-09
gb|AAU21242.1| putative RNA-dependent RNA polymerase SDE1 [Nicot... 66 6e-09
>ref|XP_002324295.1| SILENCING DEFECTIVE 1 family protein [Populus trichocarpa]
gi|222865729|gb|EEF02860.1| SILENCING DEFECTIVE 1 family
protein [Populus trichocarpa]
Length = 1200
Score = 84.3 bits (207), Expect = 2e-14
Identities = 38/56 (67%), Positives = 46/56 (82%)
Frame = -3
Query: 332 SLELRDPDGDGAPAMLSFAWIPAEYLVRIKVRHRRTENLDARKPINSLARYLAQRI 165
SLEL+DPDG G MLSFAWI A+YL RIK+RHR T N+D+ KP+NSLA+YLA R+
Sbjct: 1145 SLELQDPDGAGTSVMLSFAWIAADYLARIKIRHRETGNVDSAKPVNSLAKYLADRM 1200
>gb|ADG57590.1| RNA-dependent RNA polymerase 6 [Gossypium hirsutum]
gi|295885034|gb|ADG57592.1| RNA-dependent RNA polymerase
6 [Gossypium hirsutum]
Length = 1196
Score = 79.7 bits (195), Expect = 4e-13
Identities = 38/55 (69%), Positives = 42/55 (76%)
Frame = -3
Query: 329 LELRDPDGDGAPAMLSFAWIPAEYLVRIKVRHRRTENLDARKPINSLARYLAQRI 165
LE + PDGD MLSFAWI A+YL RIKVRH+ TENLD KP+NSL RYLA RI
Sbjct: 1142 LEFQKPDGDEGVVMLSFAWIAADYLARIKVRHQGTENLDFAKPVNSLVRYLADRI 1196
>ref|XP_002308662.1| SILENCING DEFECTIVE 1 family protein [Populus trichocarpa]
gi|222854638|gb|EEE92185.1| SILENCING DEFECTIVE 1 family
protein [Populus trichocarpa]
Length = 1198
Score = 78.2 bits (191), Expect = 1e-12
Identities = 36/56 (64%), Positives = 44/56 (78%)
Frame = -3
Query: 332 SLELRDPDGDGAPAMLSFAWIPAEYLVRIKVRHRRTENLDARKPINSLARYLAQRI 165
SLEL+D DG G MLSFAWI A+YL RIK+RH R N+D+ KP+NSLA+YLA R+
Sbjct: 1143 SLELQDSDGAGISVMLSFAWIAADYLARIKIRHSRIGNVDSAKPVNSLAKYLADRM 1198
>ref|XP_004291459.1| PREDICTED: RNA-dependent RNA polymerase 6-like [Fragaria vesca subsp.
vesca]
Length = 1197
Score = 72.4 bits (176), Expect = 6e-11
Identities = 33/56 (58%), Positives = 40/56 (71%)
Frame = -3
Query: 332 SLELRDPDGDGAPAMLSFAWIPAEYLVRIKVRHRRTENLDARKPINSLARYLAQRI 165
SL+L PDG G MLSFAWI A+YL RIK++ R N+D +KPIN L +YLA RI
Sbjct: 1142 SLDLHGPDGPGDVVMLSFAWIAADYLARIKIKRREVSNIDPKKPINILTKYLADRI 1197
>gb|AAF74208.1|AF268093_1 RNA-dependent RNA polymerase [Arabidopsis thaliana]
Length = 1196
Score = 72.0 bits (175), Expect = 8e-11
Identities = 33/56 (58%), Positives = 44/56 (78%)
Frame = -3
Query: 332 SLELRDPDGDGAPAMLSFAWIPAEYLVRIKVRHRRTENLDARKPINSLARYLAQRI 165
SLEL+DPD AMLSFAWI A+YL RIK+R R ++D+ KP++SLA++LAQR+
Sbjct: 1141 SLELQDPDESSHAAMLSFAWIAADYLARIKIRSREMGSIDSAKPVDSLAKFLAQRL 1196
>ref|NP_190519.1| RNA-dependent RNA polymerase 6 [Arabidopsis thaliana]
gi|75337188|sp|Q9SG02.1|RDR6_ARATH RecName:
Full=RNA-dependent RNA polymerase 6; Short=AtRDRP6;
AltName: Full=Protein SILENCING DEFECTIVE 1; AltName:
Full=Protein SUPPRESSOR OF GENE SILENCING 2; AltName:
Full=RNA-directed RNA polymerase 6
gi|12324444|gb|AAG52184.1|AC012329_11 putative
RNA-directed RNA polymerase; 73997-69985 [Arabidopsis
thaliana] gi|6899955|emb|CAB71285.1| RNA-directed RNA
polymerase-like protein [Arabidopsis thaliana]
gi|8164028|gb|AAF73959.1| SGS2 [Arabidopsis thaliana]
gi|332645029|gb|AEE78550.1| RNA-dependent RNA polymerase
6 [Arabidopsis thaliana]
Length = 1196
Score = 72.0 bits (175), Expect = 8e-11
Identities = 33/56 (58%), Positives = 44/56 (78%)
Frame = -3
Query: 332 SLELRDPDGDGAPAMLSFAWIPAEYLVRIKVRHRRTENLDARKPINSLARYLAQRI 165
SLEL+DPD AMLSFAWI A+YL RIK+R R ++D+ KP++SLA++LAQR+
Sbjct: 1141 SLELQDPDESSHAAMLSFAWIAADYLARIKIRSREMGSIDSAKPVDSLAKFLAQRL 1196
>ref|XP_004160762.1| PREDICTED: RNA-dependent RNA polymerase 6-like [Cucumis sativus]
Length = 1197
Score = 70.9 bits (172), Expect = 2e-10
Identities = 34/56 (60%), Positives = 42/56 (75%)
Frame = -3
Query: 332 SLELRDPDGDGAPAMLSFAWIPAEYLVRIKVRHRRTENLDARKPINSLARYLAQRI 165
SLELR+PD A MLSF WI A+YL RIK++ RRT++ D KPINSLA YL+ R+
Sbjct: 1142 SLELREPDAPEAVPMLSFPWIAADYLARIKIKCRRTKSFDPTKPINSLASYLSDRM 1197
>ref|NP_001267634.1| RNA-dependent RNA polymerase 6-like [Cucumis sativus]
gi|316989907|gb|ADU77019.1| RNA-dependent RNA polymerase
6 [Cucumis sativus]
Length = 1197
Score = 70.9 bits (172), Expect = 2e-10
Identities = 34/56 (60%), Positives = 42/56 (75%)
Frame = -3
Query: 332 SLELRDPDGDGAPAMLSFAWIPAEYLVRIKVRHRRTENLDARKPINSLARYLAQRI 165
SLELR+PD A MLSF WI A+YL RIK++ RRT++ D KPINSLA YL+ R+
Sbjct: 1142 SLELREPDAPEAVPMLSFPWIAADYLARIKIKCRRTKSFDPTKPINSLASYLSDRM 1197
>ref|XP_002515520.1| RNA-dependent RNA polymerase, putative [Ricinus communis]
gi|223545464|gb|EEF46969.1| RNA-dependent RNA polymerase,
putative [Ricinus communis]
Length = 1203
Score = 70.9 bits (172), Expect = 2e-10
Identities = 32/56 (57%), Positives = 42/56 (75%)
Frame = -3
Query: 332 SLELRDPDGDGAPAMLSFAWIPAEYLVRIKVRHRRTENLDARKPINSLARYLAQRI 165
S+EL++PD G +MLSFAWI A+YL RIK+R R + +D KP+NSL +YLA RI
Sbjct: 1148 SMELQEPDAAGCASMLSFAWIAADYLARIKIRCRGFDGVDTSKPVNSLVKYLADRI 1203
>ref|XP_006290518.1| hypothetical protein CARUB_v10016597mg [Capsella rubella]
gi|482559225|gb|EOA23416.1| hypothetical protein
CARUB_v10016597mg [Capsella rubella]
Length = 1197
Score = 69.7 bits (169), Expect = 4e-10
Identities = 34/57 (59%), Positives = 44/57 (77%), Gaps = 1/57 (1%)
Frame = -3
Query: 332 SLELRDPDGDGAPA-MLSFAWIPAEYLVRIKVRHRRTENLDARKPINSLARYLAQRI 165
SLEL+DPD A MLSFAWI A+YL RIK+R R N+D+ KP++SLA++LAQR+
Sbjct: 1141 SLELQDPDESSTHAVMLSFAWIAADYLARIKIRSREIGNMDSAKPVDSLAKFLAQRL 1197
>gb|ACO72600.1| RNA-dependent RNA polymerase 6 [Nicotiana glutinosa]
Length = 1197
Score = 69.3 bits (168), Expect = 5e-10
Identities = 34/56 (60%), Positives = 40/56 (71%)
Frame = -3
Query: 332 SLELRDPDGDGAPAMLSFAWIPAEYLVRIKVRHRRTENLDARKPINSLARYLAQRI 165
SLEL+ PD + MLSFAWI A+YL RIK+RHR D+ KPINSL RYLA +I
Sbjct: 1142 SLELQIPDAVSSTVMLSFAWIAADYLARIKIRHRGLPYSDSTKPINSLGRYLADKI 1197
>dbj|BAF96019.1| RNA-dependent RNA polymerase 6 [Nicotiana tabacum]
Length = 1197
Score = 69.3 bits (168), Expect = 5e-10
Identities = 34/56 (60%), Positives = 39/56 (69%)
Frame = -3
Query: 332 SLELRDPDGDGAPAMLSFAWIPAEYLVRIKVRHRRTENLDARKPINSLARYLAQRI 165
SLEL+ PD MLSFAWI A+YL RIK+RHRR + D+ KPINSL RYL I
Sbjct: 1142 SLELQLPDAVSNTVMLSFAWIAADYLARIKIRHRRLQYSDSTKPINSLGRYLVDNI 1197
>ref|XP_004292989.1| PREDICTED: RNA-dependent RNA polymerase 6-like [Fragaria vesca subsp.
vesca]
Length = 1065
Score = 68.9 bits (167), Expect = 7e-10
Identities = 33/56 (58%), Positives = 40/56 (71%)
Frame = -3
Query: 332 SLELRDPDGDGAPAMLSFAWIPAEYLVRIKVRHRRTENLDARKPINSLARYLAQRI 165
SL L+ PDG G MLSFAWI +YL RIK+R E +++RKPIN+L RYLA RI
Sbjct: 1006 SLYLQGPDGPGDVPMLSFAWIATDYLARIKIRRSGVEKINSRKPINTLRRYLADRI 1061
>emb|CAR47810.1| RNA-dependent RNA polymerase 6 [Nicotiana tabacum]
Length = 1197
Score = 68.6 bits (166), Expect = 9e-10
Identities = 33/56 (58%), Positives = 40/56 (71%)
Frame = -3
Query: 332 SLELRDPDGDGAPAMLSFAWIPAEYLVRIKVRHRRTENLDARKPINSLARYLAQRI 165
SLEL+ PD + MLSFAWI A+YL RIK+RHR + D+ KPINSL RYL +I
Sbjct: 1142 SLELQLPDAISSTVMLSFAWIAADYLARIKIRHRGLQYSDSTKPINSLGRYLVDKI 1197
>emb|CBI21038.3| unnamed protein product [Vitis vinifera]
Length = 1035
Score = 68.2 bits (165), Expect = 1e-09
Identities = 35/57 (61%), Positives = 43/57 (75%), Gaps = 1/57 (1%)
Frame = -3
Query: 332 SLELRDPDGD-GAPAMLSFAWIPAEYLVRIKVRHRRTENLDARKPINSLARYLAQRI 165
SLEL++PD G MLSFAWI A+YL RIK+R + T N+D+ KPINSLAR+L RI
Sbjct: 979 SLELQNPDEVFGERVMLSFAWITADYLARIKIRRKGTGNVDSSKPINSLARFLVDRI 1035
>ref|XP_002282647.1| PREDICTED: RNA-dependent RNA polymerase 6 [Vitis vinifera]
Length = 1197
Score = 68.2 bits (165), Expect = 1e-09
Identities = 35/57 (61%), Positives = 43/57 (75%), Gaps = 1/57 (1%)
Frame = -3
Query: 332 SLELRDPDGD-GAPAMLSFAWIPAEYLVRIKVRHRRTENLDARKPINSLARYLAQRI 165
SLEL++PD G MLSFAWI A+YL RIK+R + T N+D+ KPINSLAR+L RI
Sbjct: 1141 SLELQNPDEVFGERVMLSFAWITADYLARIKIRRKGTGNVDSSKPINSLARFLVDRI 1197
>gb|ACA13601.1| RNA-dependent RNA polymerase [Nicotiana attenuata]
Length = 1197
Score = 67.8 bits (164), Expect = 2e-09
Identities = 33/56 (58%), Positives = 39/56 (69%)
Frame = -3
Query: 332 SLELRDPDGDGAPAMLSFAWIPAEYLVRIKVRHRRTENLDARKPINSLARYLAQRI 165
SLEL+ PD + MLSFAWI A+YL RIK+RHR + D+ KPINSL RYL I
Sbjct: 1142 SLELQLPDAVSSTVMLSFAWIAADYLARIKIRHRGLQYSDSTKPINSLGRYLVDNI 1197
>gb|ADI52625.1| RNA-dependent RNA polymerase 6 [Nicotiana tabacum]
Length = 1197
Score = 66.2 bits (160), Expect = 4e-09
Identities = 33/56 (58%), Positives = 38/56 (67%)
Frame = -3
Query: 332 SLELRDPDGDGAPAMLSFAWIPAEYLVRIKVRHRRTENLDARKPINSLARYLAQRI 165
SLEL+ D MLSFAWI A+YL RIK+RHRR + D+ KPINSL RYL I
Sbjct: 1142 SLELQLADAVSNTVMLSFAWIAADYLARIKIRHRRLQYSDSTKPINSLGRYLVDNI 1197
>gb|AHL27586.1| RNA-dependent RNA polymerase 3 [Salvia miltiorrhiza]
Length = 1195
Score = 65.9 bits (159), Expect = 6e-09
Identities = 32/56 (57%), Positives = 40/56 (71%)
Frame = -3
Query: 332 SLELRDPDGDGAPAMLSFAWIPAEYLVRIKVRHRRTENLDARKPINSLARYLAQRI 165
S EL++ D G +LSFAWI A+YL RIK+R RR EN + KPI+SL RYLA +I
Sbjct: 1140 SKELQELDDSGKTVLLSFAWIAADYLARIKIRRRRMENAISGKPIDSLGRYLADKI 1195
>gb|AAU21242.1| putative RNA-dependent RNA polymerase SDE1 [Nicotiana benthamiana]
Length = 1197
Score = 65.9 bits (159), Expect = 6e-09
Identities = 32/56 (57%), Positives = 38/56 (67%)
Frame = -3
Query: 332 SLELRDPDGDGAPAMLSFAWIPAEYLVRIKVRHRRTENLDARKPINSLARYLAQRI 165
SLEL+ PD + MLSFAWI A+YL RI +RHR + D+ KPINSL RYL I
Sbjct: 1142 SLELQLPDAVSSTVMLSFAWIAADYLARINIRHRGLQYSDSTKPINSLGRYLVDNI 1197