BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Akebia27_contig00020575
         (736 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002509696.1| DNA-directed RNA polymerase, putative [Ricin...   348   8e-94
ref|XP_002275898.2| PREDICTED: LOW QUALITY PROTEIN: DNA-directed...   344   2e-92
emb|CAN66198.1| hypothetical protein VITISV_011232 [Vitis vinifera]   339   7e-91
ref|XP_007040111.1| DNA-directed RNA polymerase II subunit RPB1-...   322   8e-86
ref|XP_004147993.1| PREDICTED: DNA-directed RNA polymerase D sub...   322   8e-86
ref|XP_007210915.1| hypothetical protein PRUPE_ppa000278mg [Prun...   320   4e-85
emb|CBI34757.3| unnamed protein product [Vitis vinifera]              318   1e-84
ref|XP_006440521.1| hypothetical protein CICLE_v10018489mg [Citr...   309   6e-82
ref|XP_006477376.1| PREDICTED: DNA-directed RNA polymerase IV su...   309   7e-82
ref|XP_006477375.1| PREDICTED: DNA-directed RNA polymerase IV su...   309   7e-82
ref|XP_004298730.1| PREDICTED: DNA-directed RNA polymerase D sub...   305   1e-80
ref|XP_006573757.1| PREDICTED: DNA-directed RNA polymerase IV su...   296   5e-78
ref|XP_006573756.1| PREDICTED: DNA-directed RNA polymerase IV su...   296   5e-78
ref|XP_006573755.1| PREDICTED: DNA-directed RNA polymerase IV su...   296   5e-78
ref|XP_006573754.1| PREDICTED: DNA-directed RNA polymerase IV su...   296   5e-78
ref|XP_006590533.1| PREDICTED: DNA-directed RNA polymerase IV su...   294   2e-77
ref|XP_003611164.1| DNA-directed RNA polymerase subunit beta [Me...   281   2e-73
ref|XP_007158454.1| hypothetical protein PHAVU_002G153700g [Phas...   279   6e-73
ref|XP_007158453.1| hypothetical protein PHAVU_002G153700g [Phas...   279   6e-73
ref|XP_004511611.1| PREDICTED: DNA-directed RNA polymerase D sub...   279   6e-73

>ref|XP_002509696.1| DNA-directed RNA polymerase, putative [Ricinus communis]
           gi|223549595|gb|EEF51083.1| DNA-directed RNA polymerase,
           putative [Ricinus communis]
          Length = 1475

 Score =  348 bits (894), Expect = 8e-94
 Identities = 163/259 (62%), Positives = 202/259 (77%), Gaps = 14/259 (5%)
 Frame = -1

Query: 736 VDPKFIEEFVLKPDSLFLTCFPVTPNCNRVVETMHVFSNGQKLIFDERTRAYKRLVDFKQ 557
           +DP FI +FVLK DS+FL CF VTPNC+RV E  H FSNGQ+L+FD+RTRAYK++VDF+ 
Sbjct: 208 IDPNFIRKFVLKRDSIFLNCFSVTPNCHRVTEVTHAFSNGQRLVFDDRTRAYKKMVDFRG 267

Query: 556 QADELGLRVRDCLNVSKLNTEKSVDSD--------------SKSGLKWIKEVVLGKRTDH 419
            A EL  RV DCL  SK+N +KSV++D              S SGL+WIK+VVLGKR D+
Sbjct: 268 IAKELSFRVLDCLKTSKINPDKSVNNDDYMALQRKMNDSSSSSSGLRWIKDVVLGKRNDN 327

Query: 418 GFRMTVIGDPNLKFCEIGVPLDICERLLISETLNTRNWEKLNSCCNMRLLEKGEFYVRRK 239
            FRM V+GDPN+KF EIG+P  I ERL ISE L T NW+KLN+CC +RLLEKG+ +VRR+
Sbjct: 328 SFRMVVVGDPNIKFSEIGIPCPIAERLQISEHLTTWNWDKLNTCCEVRLLEKGDMHVRRE 387

Query: 238 GDLVCVRQINQLQIGDTVYRPLNEGDLLLVNRPPSIHQHSLIALFVKVLPINSVVSLNPV 59
           G LV VR+  +L+IGD +YRPLN+GD +L+NRPPSIHQHSLIAL VKVLP  SV+++NP+
Sbjct: 388 GKLVRVRRTKELRIGDIIYRPLNDGDTVLINRPPSIHQHSLIALSVKVLPATSVLAINPL 447

Query: 58  CCSPLRGDFDGDCLHGYIP 2
            C+P RGDFDGDCLHGY+P
Sbjct: 448 ICAPFRGDFDGDCLHGYVP 466


>ref|XP_002275898.2| PREDICTED: LOW QUALITY PROTEIN: DNA-directed RNA polymerase D
           subunit 1-like [Vitis vinifera]
          Length = 1560

 Score =  344 bits (883), Expect = 2e-92
 Identities = 164/248 (66%), Positives = 195/248 (78%), Gaps = 3/248 (1%)
 Frame = -1

Query: 736 VDPKFIEEFVLKPDSLFLTCFPVTPNCNRVVETMHVFSNGQKLIFDERTRAYKRLVDFKQ 557
           +DP FI+EFV + DS FL C PVTPN +RV E  H  SNGQ LIFD+ +RAYK+LVDF+ 
Sbjct: 246 IDPGFIKEFVSRMDSFFLNCLPVTPNNHRVTEITHALSNGQTLIFDQHSRAYKKLVDFRG 305

Query: 556 QADELGLRVRDCLNVSKLNTEKSVDSDSKS---GLKWIKEVVLGKRTDHGFRMTVIGDPN 386
            A+EL  RV DCL  SKL +EKS   DS S   GLKWIKEV+LGKRT+H FRM V+GDP 
Sbjct: 306 TANELSCRVLDCLKTSKLRSEKSTSKDSASKMSGLKWIKEVLLGKRTNHSFRMIVVGDPK 365

Query: 385 LKFCEIGVPLDICERLLISETLNTRNWEKLNSCCNMRLLEKGEFYVRRKGDLVCVRQINQ 206
           L+  EIG+P  I E LLISE LN+ NWEK+ + CN+RLLEKG+ YVRRKG L  VR++N 
Sbjct: 366 LRLSEIGIPCHIAEELLISEHLNSWNWEKVTNGCNLRLLEKGQTYVRRKGTLAPVRRMND 425

Query: 205 LQIGDTVYRPLNEGDLLLVNRPPSIHQHSLIALFVKVLPINSVVSLNPVCCSPLRGDFDG 26
            Q GD +YRPL +GD++L+NRPPSIHQHS+IAL VKVLP+NSVVS+NP+CCSP RGDFDG
Sbjct: 426 FQAGDIIYRPLTDGDIVLINRPPSIHQHSVIALSVKVLPLNSVVSINPLCCSPFRGDFDG 485

Query: 25  DCLHGYIP 2
           DCLHGYIP
Sbjct: 486 DCLHGYIP 493


>emb|CAN66198.1| hypothetical protein VITISV_011232 [Vitis vinifera]
          Length = 1393

 Score =  339 bits (869), Expect = 7e-91
 Identities = 164/251 (65%), Positives = 195/251 (77%), Gaps = 6/251 (2%)
 Frame = -1

Query: 736 VDPKFIEEFVLKPDSLFLTCFPVTPNCNRVVETMHVFSNGQKLIFDERTRAYKRLVDFKQ 557
           +DP FI+EFV + DS FL C PVTPN +RV E  H  SNGQ LIFD+ +RAYK+LVDF+ 
Sbjct: 213 IDPGFIKEFVSRMDSFFLNCLPVTPNNHRVTEITHALSNGQTLIFDQHSRAYKKLVDFRG 272

Query: 556 QADELGLRVRDCLNVSK---LNTEKSVDSDSKS---GLKWIKEVVLGKRTDHGFRMTVIG 395
            A+EL  RV DCL  SK   L +EKS   DS S   GLKWIKEV+LGKRT+H FRM V+G
Sbjct: 273 TANELSCRVLDCLKTSKASNLRSEKSTSKDSASKMSGLKWIKEVLLGKRTNHSFRMIVVG 332

Query: 394 DPNLKFCEIGVPLDICERLLISETLNTRNWEKLNSCCNMRLLEKGEFYVRRKGDLVCVRQ 215
           DP L+  EIG+P  I E LLISE LN+ NWEK+ + CN+RLLEKG+ YVRRKG L  VR+
Sbjct: 333 DPKLRLSEIGIPCHIAEELLISEHLNSWNWEKVTNGCNLRLLEKGQTYVRRKGTLAPVRR 392

Query: 214 INQLQIGDTVYRPLNEGDLLLVNRPPSIHQHSLIALFVKVLPINSVVSLNPVCCSPLRGD 35
           +N  Q GD +YRPL +GD++L+NRPPSIHQHS+IAL VKVLP+NSVVS+NP+CCSP RGD
Sbjct: 393 MNDFQAGDIIYRPLTDGDIVLINRPPSIHQHSVIALSVKVLPLNSVVSINPLCCSPFRGD 452

Query: 34  FDGDCLHGYIP 2
           FDGDCLHGYIP
Sbjct: 453 FDGDCLHGYIP 463


>ref|XP_007040111.1| DNA-directed RNA polymerase II subunit RPB1-B, putative [Theobroma
           cacao] gi|508777356|gb|EOY24612.1| DNA-directed RNA
           polymerase II subunit RPB1-B, putative [Theobroma cacao]
          Length = 1484

 Score =  322 bits (825), Expect = 8e-86
 Identities = 153/260 (58%), Positives = 197/260 (75%), Gaps = 15/260 (5%)
 Frame = -1

Query: 736 VDPKFIEEFVLKPDSLFLTCFPVTPNCNRVVETMHVFSNGQKLIFDERTRAYKRLVDFKQ 557
           VDP+FI++FVL  DS+FL CFPVTPN +RV E MH  SNGQ+LIFD+RTR YK+L DF+ 
Sbjct: 215 VDPEFIKKFVLSMDSIFLNCFPVTPNSHRVTEIMHASSNGQRLIFDQRTRVYKKLADFRG 274

Query: 556 QADELGLRVRDCLNVSKLNTEKSVDSDSK---------------SGLKWIKEVVLGKRTD 422
            A+EL   V +CL +SKL+ EK  + +S                SGL+++K+V+LGKR D
Sbjct: 275 IANELSSHVLECLKISKLHLEKPSNEESALVLAQKRNKDSASNMSGLRYMKDVILGKRND 334

Query: 421 HGFRMTVIGDPNLKFCEIGVPLDICERLLISETLNTRNWEKLNSCCNMRLLEKGEFYVRR 242
           H FRM + G+PNLK  EI +P  + ERL I+E LN  N E+L +CC++RLLEKGE +VRR
Sbjct: 335 HCFRMVLTGNPNLKLSEISIPCHVAERLQIAEQLNNWNEERLKACCDLRLLEKGEIHVRR 394

Query: 241 KGDLVCVRQINQLQIGDTVYRPLNEGDLLLVNRPPSIHQHSLIALFVKVLPINSVVSLNP 62
           +G LV +R   +LQ+GDT++RPLN GD++L+NRPPSIHQHSLIAL VKVLP++SVVS+NP
Sbjct: 395 EGRLVRIRHNEKLQVGDTIFRPLNNGDIILINRPPSIHQHSLIALSVKVLPVSSVVSINP 454

Query: 61  VCCSPLRGDFDGDCLHGYIP 2
           + CSP RGDFDGDCLHGY+P
Sbjct: 455 LICSPFRGDFDGDCLHGYVP 474


>ref|XP_004147993.1| PREDICTED: DNA-directed RNA polymerase D subunit 1-like [Cucumis
           sativus] gi|449494342|ref|XP_004159519.1| PREDICTED: LOW
           QUALITY PROTEIN: DNA-directed RNA polymerase D subunit
           1-like [Cucumis sativus]
          Length = 1469

 Score =  322 bits (825), Expect = 8e-86
 Identities = 158/260 (60%), Positives = 202/260 (77%), Gaps = 15/260 (5%)
 Frame = -1

Query: 736 VDPKFIEEFVLKPDSLFLTCFPVTPNCNRVVETMHVFSNGQKLIFDERTRAYKRLVDFKQ 557
           +DPKF+++FV   DSLFL  FPVTPN +RV E  H FSNGQ+LIFDERTRAYK++VDF+ 
Sbjct: 213 IDPKFLKKFVPAIDSLFLNSFPVTPNSHRVTEMAHSFSNGQRLIFDERTRAYKKVVDFRG 272

Query: 556 QADELGLRVRDCLNVSK---------LNT----EKSVD--SDSKSGLKWIKEVVLGKRTD 422
            A+ELG RV DCL +SK         LN     +K +   + S SGL+WIK+VVLGKR+D
Sbjct: 273 TANELGSRVLDCLKISKAIYNIFVFCLNHVNYYQKKIKDTATSSSGLRWIKDVVLGKRSD 332

Query: 421 HGFRMTVIGDPNLKFCEIGVPLDICERLLISETLNTRNWEKLNSCCNMRLLEKGEFYVRR 242
           H FRM V+GDPN++  EIG+P  + ERL ISE L++ N +KL++ C + L+EKGE YVRR
Sbjct: 333 HCFRMVVVGDPNIELSEIGIPCHVAERLQISEHLSSWNMKKLSTSCYLHLVEKGEIYVRR 392

Query: 241 KGDLVCVRQINQLQIGDTVYRPLNEGDLLLVNRPPSIHQHSLIALFVKVLPINSVVSLNP 62
           +G LV VR + +L +GDT+YRPL +GD++LVNRPPSIHQHSLIAL VK+LP+++V+SLNP
Sbjct: 393 EGRLVRVRNVLELNMGDTIYRPLADGDIVLVNRPPSIHQHSLIALSVKLLPVSAVLSLNP 452

Query: 61  VCCSPLRGDFDGDCLHGYIP 2
           +CCSP RGDFDGDCLHGY+P
Sbjct: 453 LCCSPFRGDFDGDCLHGYVP 472


>ref|XP_007210915.1| hypothetical protein PRUPE_ppa000278mg [Prunus persica]
           gi|462406650|gb|EMJ12114.1| hypothetical protein
           PRUPE_ppa000278mg [Prunus persica]
          Length = 1356

 Score =  320 bits (819), Expect = 4e-85
 Identities = 157/245 (64%), Positives = 189/245 (77%)
 Frame = -1

Query: 736 VDPKFIEEFVLKPDSLFLTCFPVTPNCNRVVETMHVFSNGQKLIFDERTRAYKRLVDFKQ 557
           VD KFIE+ V K +SL +  F VTPNC+RV E MH FSNGQ+L+FDERTRAY++LVDFK 
Sbjct: 206 VDTKFIEKIVPKTNSLSMGSFLVTPNCHRVTEVMHSFSNGQRLMFDERTRAYRKLVDFKG 265

Query: 556 QADELGLRVRDCLNVSKLNTEKSVDSDSKSGLKWIKEVVLGKRTDHGFRMTVIGDPNLKF 377
            A+ELG                S D    SGL+WIK+VVLGKR+DH FR  V+GDPN+K 
Sbjct: 266 VANELG----------------SHDPSKTSGLRWIKDVVLGKRSDHCFRTVVVGDPNIKL 309

Query: 376 CEIGVPLDICERLLISETLNTRNWEKLNSCCNMRLLEKGEFYVRRKGDLVCVRQINQLQI 197
            EIG+P  I ERL ISE LN  N EKL++ CN+RL+ KGE +VRRKG LV VRQ ++LQ+
Sbjct: 310 SEIGIPCQIAERLQISENLNRWNIEKLDASCNLRLMVKGEMHVRRKGSLVWVRQTDELQM 369

Query: 196 GDTVYRPLNEGDLLLVNRPPSIHQHSLIALFVKVLPINSVVSLNPVCCSPLRGDFDGDCL 17
           GDT+YRPL++GD++L+NRPPSIHQHSLIAL VK+LPI SVVS+NP+CCSP RGDFDGDCL
Sbjct: 370 GDTIYRPLSDGDIVLINRPPSIHQHSLIALSVKILPITSVVSINPLCCSPFRGDFDGDCL 429

Query: 16  HGYIP 2
           HGYIP
Sbjct: 430 HGYIP 434


>emb|CBI34757.3| unnamed protein product [Vitis vinifera]
          Length = 1359

 Score =  318 bits (815), Expect = 1e-84
 Identities = 154/245 (62%), Positives = 186/245 (75%)
 Frame = -1

Query: 736 VDPKFIEEFVLKPDSLFLTCFPVTPNCNRVVETMHVFSNGQKLIFDERTRAYKRLVDFKQ 557
           +DP FI+EFV + DS FL C PVTPN +RV E  H  SNGQ LIFD+ +RAYK+LVDF+ 
Sbjct: 208 IDPGFIKEFVSRMDSFFLNCLPVTPNNHRVTEITHALSNGQTLIFDQHSRAYKKLVDFRG 267

Query: 556 QADELGLRVRDCLNVSKLNTEKSVDSDSKSGLKWIKEVVLGKRTDHGFRMTVIGDPNLKF 377
            A+EL      C + SK+           SGLKWIKEV+LGKRT+H FRM V+GDP L+ 
Sbjct: 268 TANELS-----CHSASKM-----------SGLKWIKEVLLGKRTNHSFRMIVVGDPKLRL 311

Query: 376 CEIGVPLDICERLLISETLNTRNWEKLNSCCNMRLLEKGEFYVRRKGDLVCVRQINQLQI 197
            EIG+P  I E LLISE LN+ NWEK+ + CN+RLLEKG+ YVRRKG L  VR++N  Q 
Sbjct: 312 SEIGIPCHIAEELLISEHLNSWNWEKVTNGCNLRLLEKGQTYVRRKGTLAPVRRMNDFQA 371

Query: 196 GDTVYRPLNEGDLLLVNRPPSIHQHSLIALFVKVLPINSVVSLNPVCCSPLRGDFDGDCL 17
           GD +YRPL +GD++L+NRPPSIHQHS+IAL VKVLP+NSVVS+NP+CCSP RGDFDGDCL
Sbjct: 372 GDIIYRPLTDGDIVLINRPPSIHQHSVIALSVKVLPLNSVVSINPLCCSPFRGDFDGDCL 431

Query: 16  HGYIP 2
           HGYIP
Sbjct: 432 HGYIP 436


>ref|XP_006440521.1| hypothetical protein CICLE_v10018489mg [Citrus clementina]
           gi|557542783|gb|ESR53761.1| hypothetical protein
           CICLE_v10018489mg [Citrus clementina]
          Length = 1443

 Score =  309 bits (792), Expect = 6e-82
 Identities = 150/258 (58%), Positives = 189/258 (73%), Gaps = 13/258 (5%)
 Frame = -1

Query: 736 VDPKFIEEFVLKPDSLFLTCFPVTPNCNRVVETMHVFSNGQKLIFDERTRAYKRLVDFKQ 557
           VDP   EEF+L  D+ FL CFPVTPN +RV E  H FS+ +KL FD  TR  K++VD++ 
Sbjct: 206 VDPSIREEFILSKDAPFLKCFPVTPNNHRVTEVPHAFSHEKKLFFDNWTRHLKKMVDYRG 265

Query: 556 QADELGLRVRDCLNVSKLNTEKS-------------VDSDSKSGLKWIKEVVLGKRTDHG 416
           +  EL   V+DCL +SKL+ +KS             +D  + SGL+WIK+VVLGKR D  
Sbjct: 266 RDIELSHLVQDCLKISKLHLDKSSRKDSAEVRQKKNIDISNSSGLRWIKDVVLGKRNDDC 325

Query: 415 FRMTVIGDPNLKFCEIGVPLDICERLLISETLNTRNWEKLNSCCNMRLLEKGEFYVRRKG 236
           FRM V GDPN+K  EIG+P  + ERL ISE LN+ NWE+L+ C + RLLEKGE YV RKG
Sbjct: 326 FRMVVTGDPNIKLKEIGIPCQVAERLQISERLNSWNWERLSVCISFRLLEKGELYVCRKG 385

Query: 235 DLVCVRQINQLQIGDTVYRPLNEGDLLLVNRPPSIHQHSLIALFVKVLPINSVVSLNPVC 56
            LV +R+I+ L++GD +YRPL +GD++L+NRPPSIH HSLIAL VKVLPI+SVV++NP+C
Sbjct: 386 GLVRIRRIDALELGDIIYRPLTDGDIVLINRPPSIHPHSLIALTVKVLPISSVVTINPLC 445

Query: 55  CSPLRGDFDGDCLHGYIP 2
           CSP  GDFDGDCLHGYIP
Sbjct: 446 CSPFHGDFDGDCLHGYIP 463


>ref|XP_006477376.1| PREDICTED: DNA-directed RNA polymerase IV subunit 1-like isoform X2
           [Citrus sinensis] gi|568847098|ref|XP_006477377.1|
           PREDICTED: DNA-directed RNA polymerase IV subunit 1-like
           isoform X3 [Citrus sinensis]
           gi|568847100|ref|XP_006477378.1| PREDICTED: DNA-directed
           RNA polymerase IV subunit 1-like isoform X4 [Citrus
           sinensis]
          Length = 1443

 Score =  309 bits (791), Expect = 7e-82
 Identities = 150/258 (58%), Positives = 189/258 (73%), Gaps = 13/258 (5%)
 Frame = -1

Query: 736 VDPKFIEEFVLKPDSLFLTCFPVTPNCNRVVETMHVFSNGQKLIFDERTRAYKRLVDFKQ 557
           VDP   EEF+L  D+ FL CFPVTPN +RV E  H FS+ +KL FD  TR  K++VD++ 
Sbjct: 206 VDPSIREEFILSKDAPFLKCFPVTPNNHRVTEVPHAFSHEKKLFFDNWTRHLKKMVDYRG 265

Query: 556 QADELGLRVRDCLNVSKLNTEKS-------------VDSDSKSGLKWIKEVVLGKRTDHG 416
           +  EL   V+DCL +SKL+ +KS             +D  + SGL+WIK+VVLGKR D  
Sbjct: 266 RDIELSHLVQDCLKISKLHLDKSSRKDSAEVRQKKNIDISNSSGLRWIKDVVLGKRNDDC 325

Query: 415 FRMTVIGDPNLKFCEIGVPLDICERLLISETLNTRNWEKLNSCCNMRLLEKGEFYVRRKG 236
           FRM V GDPN+K  EIG+P  + ERL ISE LN+ NWE+L+ C + RLLEKGE YV RKG
Sbjct: 326 FRMVVTGDPNIKLKEIGIPCHVAERLQISERLNSWNWERLSVCTSFRLLEKGELYVCRKG 385

Query: 235 DLVCVRQINQLQIGDTVYRPLNEGDLLLVNRPPSIHQHSLIALFVKVLPINSVVSLNPVC 56
            LV +R+I+ L++GD +YRPL +GD++L+NRPPSIH HSLIAL VKVLPI+SVV++NP+C
Sbjct: 386 GLVRIRRIDALELGDIIYRPLTDGDIVLINRPPSIHPHSLIALTVKVLPISSVVTINPLC 445

Query: 55  CSPLRGDFDGDCLHGYIP 2
           CSP  GDFDGDCLHGYIP
Sbjct: 446 CSPFHGDFDGDCLHGYIP 463


>ref|XP_006477375.1| PREDICTED: DNA-directed RNA polymerase IV subunit 1-like isoform X1
            [Citrus sinensis]
          Length = 1481

 Score =  309 bits (791), Expect = 7e-82
 Identities = 150/258 (58%), Positives = 189/258 (73%), Gaps = 13/258 (5%)
 Frame = -1

Query: 736  VDPKFIEEFVLKPDSLFLTCFPVTPNCNRVVETMHVFSNGQKLIFDERTRAYKRLVDFKQ 557
            VDP   EEF+L  D+ FL CFPVTPN +RV E  H FS+ +KL FD  TR  K++VD++ 
Sbjct: 244  VDPSIREEFILSKDAPFLKCFPVTPNNHRVTEVPHAFSHEKKLFFDNWTRHLKKMVDYRG 303

Query: 556  QADELGLRVRDCLNVSKLNTEKS-------------VDSDSKSGLKWIKEVVLGKRTDHG 416
            +  EL   V+DCL +SKL+ +KS             +D  + SGL+WIK+VVLGKR D  
Sbjct: 304  RDIELSHLVQDCLKISKLHLDKSSRKDSAEVRQKKNIDISNSSGLRWIKDVVLGKRNDDC 363

Query: 415  FRMTVIGDPNLKFCEIGVPLDICERLLISETLNTRNWEKLNSCCNMRLLEKGEFYVRRKG 236
            FRM V GDPN+K  EIG+P  + ERL ISE LN+ NWE+L+ C + RLLEKGE YV RKG
Sbjct: 364  FRMVVTGDPNIKLKEIGIPCHVAERLQISERLNSWNWERLSVCTSFRLLEKGELYVCRKG 423

Query: 235  DLVCVRQINQLQIGDTVYRPLNEGDLLLVNRPPSIHQHSLIALFVKVLPINSVVSLNPVC 56
             LV +R+I+ L++GD +YRPL +GD++L+NRPPSIH HSLIAL VKVLPI+SVV++NP+C
Sbjct: 424  GLVRIRRIDALELGDIIYRPLTDGDIVLINRPPSIHPHSLIALTVKVLPISSVVTINPLC 483

Query: 55   CSPLRGDFDGDCLHGYIP 2
            CSP  GDFDGDCLHGYIP
Sbjct: 484  CSPFHGDFDGDCLHGYIP 501


>ref|XP_004298730.1| PREDICTED: DNA-directed RNA polymerase D subunit 1-like [Fragaria
           vesca subsp. vesca]
          Length = 1438

 Score =  305 bits (780), Expect = 1e-80
 Identities = 151/260 (58%), Positives = 193/260 (74%), Gaps = 15/260 (5%)
 Frame = -1

Query: 736 VDPKFIEEFVLKPDSLFLTCFPVTPNCNRVVETMHVFSNGQKLIFDERTRAYKRLVDFKQ 557
           VD  FI +FV    SL L CF VTPNC+RV E M+ F+NGQ L+FD+RTRAY++LVDF+ 
Sbjct: 192 VDSNFITKFVPTTSSLSLDCFLVTPNCHRVTEVMYSFNNGQSLMFDDRTRAYRKLVDFRG 251

Query: 556 QADELGLRVRDCLNVSKLNTEKS------------VDSDSK-SGLKWIKEVVLGKRTDHG 416
            A+ELG RV DCL +SK+N EK+             DS S+ SGL+WIK+VVLGKR+DH 
Sbjct: 252 TANELGSRVLDCLKISKINKEKTGRDSISVEQQKIKDSPSRTSGLRWIKDVVLGKRSDHC 311

Query: 415 FRMTVIGDPNLKFCEIGVPLDICERLLISETLNTRNWEKLNSCCNMRLLE--KGEFYVRR 242
           FRM V+GDPN+K  EIG+P  I E++ ISE LN  N+EKL   C +RL    +G+ +VRR
Sbjct: 312 FRMVVVGDPNIKLSEIGIPRHIAEKMQISENLNQYNFEKLFVFCQLRLGPDGRGDIHVRR 371

Query: 241 KGDLVCVRQINQLQIGDTVYRPLNEGDLLLVNRPPSIHQHSLIALFVKVLPINSVVSLNP 62
              LV +R+  +L++GD +YR L+ GD++L+NRPPSIHQHSLIAL  KVLP+NSVVS+NP
Sbjct: 372 NDSLVRIRKPEELEMGDIIYRALSNGDVVLINRPPSIHQHSLIALTTKVLPVNSVVSINP 431

Query: 61  VCCSPLRGDFDGDCLHGYIP 2
           +CCSP +GDFDGDCLHGY+P
Sbjct: 432 LCCSPFQGDFDGDCLHGYVP 451


>ref|XP_006573757.1| PREDICTED: DNA-directed RNA polymerase IV subunit 1-like isoform X4
           [Glycine max]
          Length = 1381

 Score =  296 bits (758), Expect = 5e-78
 Identities = 145/259 (55%), Positives = 187/259 (72%), Gaps = 14/259 (5%)
 Frame = -1

Query: 736 VDPKFIEEFVLKPDSLFLTCFPVTPNCNRVVETMHVFSNGQKLIFDERTRAYKRLVDFKQ 557
           VDP FIE+++ + + L L CFPVTPNC+RV E  +  S+G +L FD+RTR+ K+LVDF+ 
Sbjct: 121 VDPDFIEKYIPRKNLLCLNCFPVTPNCHRVTEVPYAISSGSRLSFDDRTRSCKKLVDFRG 180

Query: 556 QADELGLRVRDCLNVSKLNTEKSVDSD--------------SKSGLKWIKEVVLGKRTDH 419
            A+EL  RV DCL +SKLN +K+ +S               + SGL+WIK+VVLGKR D 
Sbjct: 181 TANELSSRVLDCLRISKLNPDKTPNSIFADIQQRKIGENAFNSSGLRWIKDVVLGKRNDS 240

Query: 418 GFRMTVIGDPNLKFCEIGVPLDICERLLISETLNTRNWEKLNSCCNMRLLEKGEFYVRRK 239
            FR  V+GDP+L+  EIG+P  I E L +SE +N +N EKL  CC + LLEKG+  V RK
Sbjct: 241 SFRTVVVGDPDLELSEIGIPCHIAESLQVSEYVNRQNREKLLYCCELHLLEKGKINVCRK 300

Query: 238 GDLVCVRQINQLQIGDTVYRPLNEGDLLLVNRPPSIHQHSLIALFVKVLPINSVVSLNPV 59
           G +V + +   LQIGD  YRPL +GD +L+NRPPSIHQHS+I+L V+VLPI+SVV +NP+
Sbjct: 301 GSIVHLYKKEDLQIGDKFYRPLADGDKVLINRPPSIHQHSMISLTVRVLPISSVVCINPL 360

Query: 58  CCSPLRGDFDGDCLHGYIP 2
           CCSPLRGDFDGDCLHGYIP
Sbjct: 361 CCSPLRGDFDGDCLHGYIP 379


>ref|XP_006573756.1| PREDICTED: DNA-directed RNA polymerase IV subunit 1-like isoform X3
           [Glycine max]
          Length = 1455

 Score =  296 bits (758), Expect = 5e-78
 Identities = 145/259 (55%), Positives = 187/259 (72%), Gaps = 14/259 (5%)
 Frame = -1

Query: 736 VDPKFIEEFVLKPDSLFLTCFPVTPNCNRVVETMHVFSNGQKLIFDERTRAYKRLVDFKQ 557
           VDP FIE+++ + + L L CFPVTPNC+RV E  +  S+G +L FD+RTR+ K+LVDF+ 
Sbjct: 198 VDPDFIEKYIPRKNLLCLNCFPVTPNCHRVTEVPYAISSGSRLSFDDRTRSCKKLVDFRG 257

Query: 556 QADELGLRVRDCLNVSKLNTEKSVDSD--------------SKSGLKWIKEVVLGKRTDH 419
            A+EL  RV DCL +SKLN +K+ +S               + SGL+WIK+VVLGKR D 
Sbjct: 258 TANELSSRVLDCLRISKLNPDKTPNSIFADIQQRKIGENAFNSSGLRWIKDVVLGKRNDS 317

Query: 418 GFRMTVIGDPNLKFCEIGVPLDICERLLISETLNTRNWEKLNSCCNMRLLEKGEFYVRRK 239
            FR  V+GDP+L+  EIG+P  I E L +SE +N +N EKL  CC + LLEKG+  V RK
Sbjct: 318 SFRTVVVGDPDLELSEIGIPCHIAESLQVSEYVNRQNREKLLYCCELHLLEKGKINVCRK 377

Query: 238 GDLVCVRQINQLQIGDTVYRPLNEGDLLLVNRPPSIHQHSLIALFVKVLPINSVVSLNPV 59
           G +V + +   LQIGD  YRPL +GD +L+NRPPSIHQHS+I+L V+VLPI+SVV +NP+
Sbjct: 378 GSIVHLYKKEDLQIGDKFYRPLADGDKVLINRPPSIHQHSMISLTVRVLPISSVVCINPL 437

Query: 58  CCSPLRGDFDGDCLHGYIP 2
           CCSPLRGDFDGDCLHGYIP
Sbjct: 438 CCSPLRGDFDGDCLHGYIP 456


>ref|XP_006573755.1| PREDICTED: DNA-directed RNA polymerase IV subunit 1-like isoform X2
           [Glycine max]
          Length = 1457

 Score =  296 bits (758), Expect = 5e-78
 Identities = 145/259 (55%), Positives = 187/259 (72%), Gaps = 14/259 (5%)
 Frame = -1

Query: 736 VDPKFIEEFVLKPDSLFLTCFPVTPNCNRVVETMHVFSNGQKLIFDERTRAYKRLVDFKQ 557
           VDP FIE+++ + + L L CFPVTPNC+RV E  +  S+G +L FD+RTR+ K+LVDF+ 
Sbjct: 198 VDPDFIEKYIPRKNLLCLNCFPVTPNCHRVTEVPYAISSGSRLSFDDRTRSCKKLVDFRG 257

Query: 556 QADELGLRVRDCLNVSKLNTEKSVDSD--------------SKSGLKWIKEVVLGKRTDH 419
            A+EL  RV DCL +SKLN +K+ +S               + SGL+WIK+VVLGKR D 
Sbjct: 258 TANELSSRVLDCLRISKLNPDKTPNSIFADIQQRKIGENAFNSSGLRWIKDVVLGKRNDS 317

Query: 418 GFRMTVIGDPNLKFCEIGVPLDICERLLISETLNTRNWEKLNSCCNMRLLEKGEFYVRRK 239
            FR  V+GDP+L+  EIG+P  I E L +SE +N +N EKL  CC + LLEKG+  V RK
Sbjct: 318 SFRTVVVGDPDLELSEIGIPCHIAESLQVSEYVNRQNREKLLYCCELHLLEKGKINVCRK 377

Query: 238 GDLVCVRQINQLQIGDTVYRPLNEGDLLLVNRPPSIHQHSLIALFVKVLPINSVVSLNPV 59
           G +V + +   LQIGD  YRPL +GD +L+NRPPSIHQHS+I+L V+VLPI+SVV +NP+
Sbjct: 378 GSIVHLYKKEDLQIGDKFYRPLADGDKVLINRPPSIHQHSMISLTVRVLPISSVVCINPL 437

Query: 58  CCSPLRGDFDGDCLHGYIP 2
           CCSPLRGDFDGDCLHGYIP
Sbjct: 438 CCSPLRGDFDGDCLHGYIP 456


>ref|XP_006573754.1| PREDICTED: DNA-directed RNA polymerase IV subunit 1-like isoform X1
           [Glycine max]
          Length = 1458

 Score =  296 bits (758), Expect = 5e-78
 Identities = 145/259 (55%), Positives = 187/259 (72%), Gaps = 14/259 (5%)
 Frame = -1

Query: 736 VDPKFIEEFVLKPDSLFLTCFPVTPNCNRVVETMHVFSNGQKLIFDERTRAYKRLVDFKQ 557
           VDP FIE+++ + + L L CFPVTPNC+RV E  +  S+G +L FD+RTR+ K+LVDF+ 
Sbjct: 198 VDPDFIEKYIPRKNLLCLNCFPVTPNCHRVTEVPYAISSGSRLSFDDRTRSCKKLVDFRG 257

Query: 556 QADELGLRVRDCLNVSKLNTEKSVDSD--------------SKSGLKWIKEVVLGKRTDH 419
            A+EL  RV DCL +SKLN +K+ +S               + SGL+WIK+VVLGKR D 
Sbjct: 258 TANELSSRVLDCLRISKLNPDKTPNSIFADIQQRKIGENAFNSSGLRWIKDVVLGKRNDS 317

Query: 418 GFRMTVIGDPNLKFCEIGVPLDICERLLISETLNTRNWEKLNSCCNMRLLEKGEFYVRRK 239
            FR  V+GDP+L+  EIG+P  I E L +SE +N +N EKL  CC + LLEKG+  V RK
Sbjct: 318 SFRTVVVGDPDLELSEIGIPCHIAESLQVSEYVNRQNREKLLYCCELHLLEKGKINVCRK 377

Query: 238 GDLVCVRQINQLQIGDTVYRPLNEGDLLLVNRPPSIHQHSLIALFVKVLPINSVVSLNPV 59
           G +V + +   LQIGD  YRPL +GD +L+NRPPSIHQHS+I+L V+VLPI+SVV +NP+
Sbjct: 378 GSIVHLYKKEDLQIGDKFYRPLADGDKVLINRPPSIHQHSMISLTVRVLPISSVVCINPL 437

Query: 58  CCSPLRGDFDGDCLHGYIP 2
           CCSPLRGDFDGDCLHGYIP
Sbjct: 438 CCSPLRGDFDGDCLHGYIP 456


>ref|XP_006590533.1| PREDICTED: DNA-directed RNA polymerase IV subunit 1-like [Glycine
           max]
          Length = 1369

 Score =  294 bits (753), Expect = 2e-77
 Identities = 143/259 (55%), Positives = 186/259 (71%), Gaps = 14/259 (5%)
 Frame = -1

Query: 736 VDPKFIEEFVLKPDSLFLTCFPVTPNCNRVVETMHVFSNGQKLIFDERTRAYKRLVDFKQ 557
           VDP FIE+++ + + L+L CFPVTPNC+RV E  +  S+G +L FD+RTR+ K+LVDF+ 
Sbjct: 112 VDPDFIEKYIPRKNLLYLNCFPVTPNCHRVTEVPYAISSGSRLSFDDRTRSCKKLVDFRG 171

Query: 556 QADELGLRVRDCLNVSKLNTEKSVDSD--------------SKSGLKWIKEVVLGKRTDH 419
             +EL  RV DCL +SKLN +K+ +S               + SGL+WIK+VVLGKR D 
Sbjct: 172 TPNELSSRVLDCLRISKLNPDKTPNSIFADIQQRKIGENACNSSGLRWIKDVVLGKRNDS 231

Query: 418 GFRMTVIGDPNLKFCEIGVPLDICERLLISETLNTRNWEKLNSCCNMRLLEKGEFYVRRK 239
             R  V+GDP+L+  E+G+P  I E L +SE +N +N EKL  CC +RLLEKG+  V R 
Sbjct: 232 SLRTVVVGDPDLELSEVGIPCHIAESLQVSEYVNRQNREKLLYCCELRLLEKGKIDVCRN 291

Query: 238 GDLVCVRQINQLQIGDTVYRPLNEGDLLLVNRPPSIHQHSLIALFVKVLPINSVVSLNPV 59
           G  V + +   LQIGD +YRPL +GD +L+NRPPSIHQHS+IAL V+VLPI+SVV +NP+
Sbjct: 292 GSKVHLYKKEDLQIGDKIYRPLADGDKVLINRPPSIHQHSMIALTVRVLPISSVVCINPL 351

Query: 58  CCSPLRGDFDGDCLHGYIP 2
           CCSPLRGDFDGDCLHGYIP
Sbjct: 352 CCSPLRGDFDGDCLHGYIP 370


>ref|XP_003611164.1| DNA-directed RNA polymerase subunit beta [Medicago truncatula]
            gi|355512499|gb|AES94122.1| DNA-directed RNA polymerase
            subunit beta [Medicago truncatula]
          Length = 1687

 Score =  281 bits (719), Expect = 2e-73
 Identities = 143/264 (54%), Positives = 182/264 (68%), Gaps = 19/264 (7%)
 Frame = -1

Query: 736  VDPKFIEEFVLKPDSLFLTCFPVTPNCNRVVETMHVFSNGQKLIFDERTRAYKRLVDFKQ 557
            VDP FIE+F+   D + L+CF V PNC+RV E  H  S G  L FD RTRA K+LVDF+ 
Sbjct: 361  VDPNFIEKFIPSMDLVGLSCFLVAPNCHRVTEVPHRLSGGYPLSFDNRTRACKKLVDFRG 420

Query: 556  QADELGLRVRDCLNVSK-----LNTEKSV--------------DSDSKSGLKWIKEVVLG 434
             A+EL  RV DCL  SK     +N +++               ++ + SGL+W+K+VVLG
Sbjct: 421  TANELSSRVLDCLRFSKASFSVINPDRTPVNIFTELQQRKVGENACNSSGLRWMKDVVLG 480

Query: 433  KRTDHGFRMTVIGDPNLKFCEIGVPLDICERLLISETLNTRNWEKLNSCCNMRLLEKGEF 254
            KR D  FR  V+GDP+L+  EIG+P  I E L +SE +N +N + L  CC +RLLEKG+ 
Sbjct: 481  KRNDCTFRTVVVGDPDLELSEIGIPCQIAEALQVSEYVNRQNRQNLLYCCELRLLEKGQI 540

Query: 253  YVRRKGDLVCVRQINQLQIGDTVYRPLNEGDLLLVNRPPSIHQHSLIALFVKVLPINSVV 74
             VRR G+ V + +   LQIGD  YRPL +GD +L+NRPPSIHQHS+IAL V+VLPI+SVV
Sbjct: 541  NVRRNGNPVVLYKKEDLQIGDIFYRPLVDGDKVLINRPPSIHQHSMIALTVRVLPISSVV 600

Query: 73   SLNPVCCSPLRGDFDGDCLHGYIP 2
            S+NP+CCSPLRGDFDGDCLHGYIP
Sbjct: 601  SINPICCSPLRGDFDGDCLHGYIP 624


>ref|XP_007158454.1| hypothetical protein PHAVU_002G153700g [Phaseolus vulgaris]
           gi|561031869|gb|ESW30448.1| hypothetical protein
           PHAVU_002G153700g [Phaseolus vulgaris]
          Length = 1464

 Score =  279 bits (714), Expect = 6e-73
 Identities = 141/254 (55%), Positives = 177/254 (69%), Gaps = 9/254 (3%)
 Frame = -1

Query: 736 VDPKFIEEFVLKPDSLFLTCFPVTPNCNRVVETMHVFSNGQKLIFDERTRAYKRLVDFKQ 557
           VDP FIE++V + + + L CFPVTPNC+RV E  +  SNG +L FD+RTR+ K+LVDF+ 
Sbjct: 205 VDPNFIEKYVPRNNLITLNCFPVTPNCHRVTEVPYAISNGNRLSFDDRTRSCKKLVDFRG 264

Query: 556 QADELGLRVRDCLNVSKLNTEKSVDSDSK---------SGLKWIKEVVLGKRTDHGFRMT 404
            A+EL  R    LN  K       D   K         SGL+WIK+V+LGKR D  FR  
Sbjct: 265 TANELSSR----LNPDKTPISIFADIQKKKVAENACNSSGLRWIKDVILGKRNDSTFRTV 320

Query: 403 VIGDPNLKFCEIGVPLDICERLLISETLNTRNWEKLNSCCNMRLLEKGEFYVRRKGDLVC 224
           V+GDP+L+  EIG+P  I E L +SE +N +N EKL  CC +RLLEKG+  V RKG  + 
Sbjct: 321 VVGDPSLELSEIGIPCHIAESLQVSEYVNRQNLEKLLYCCELRLLEKGQINVCRKGSSIH 380

Query: 223 VRQINQLQIGDTVYRPLNEGDLLLVNRPPSIHQHSLIALFVKVLPINSVVSLNPVCCSPL 44
           + +   LQIGD  YRPL +GD +L+NRPPSIHQHS+IAL V+VLPI+SVV +NP+CCSPL
Sbjct: 381 LFKKEDLQIGDQFYRPLCDGDKVLINRPPSIHQHSMIALTVRVLPISSVVCINPLCCSPL 440

Query: 43  RGDFDGDCLHGYIP 2
           RGDFDGDCLHGYIP
Sbjct: 441 RGDFDGDCLHGYIP 454


>ref|XP_007158453.1| hypothetical protein PHAVU_002G153700g [Phaseolus vulgaris]
           gi|561031868|gb|ESW30447.1| hypothetical protein
           PHAVU_002G153700g [Phaseolus vulgaris]
          Length = 1463

 Score =  279 bits (714), Expect = 6e-73
 Identities = 141/254 (55%), Positives = 177/254 (69%), Gaps = 9/254 (3%)
 Frame = -1

Query: 736 VDPKFIEEFVLKPDSLFLTCFPVTPNCNRVVETMHVFSNGQKLIFDERTRAYKRLVDFKQ 557
           VDP FIE++V + + + L CFPVTPNC+RV E  +  SNG +L FD+RTR+ K+LVDF+ 
Sbjct: 205 VDPNFIEKYVPRNNLITLNCFPVTPNCHRVTEVPYAISNGNRLSFDDRTRSCKKLVDFRG 264

Query: 556 QADELGLRVRDCLNVSKLNTEKSVDSDSK---------SGLKWIKEVVLGKRTDHGFRMT 404
            A+EL  R    LN  K       D   K         SGL+WIK+V+LGKR D  FR  
Sbjct: 265 TANELSSR----LNPDKTPISIFADIQKKKVAENACNSSGLRWIKDVILGKRNDSTFRTV 320

Query: 403 VIGDPNLKFCEIGVPLDICERLLISETLNTRNWEKLNSCCNMRLLEKGEFYVRRKGDLVC 224
           V+GDP+L+  EIG+P  I E L +SE +N +N EKL  CC +RLLEKG+  V RKG  + 
Sbjct: 321 VVGDPSLELSEIGIPCHIAESLQVSEYVNRQNLEKLLYCCELRLLEKGQINVCRKGSSIH 380

Query: 223 VRQINQLQIGDTVYRPLNEGDLLLVNRPPSIHQHSLIALFVKVLPINSVVSLNPVCCSPL 44
           + +   LQIGD  YRPL +GD +L+NRPPSIHQHS+IAL V+VLPI+SVV +NP+CCSPL
Sbjct: 381 LFKKEDLQIGDQFYRPLCDGDKVLINRPPSIHQHSMIALTVRVLPISSVVCINPLCCSPL 440

Query: 43  RGDFDGDCLHGYIP 2
           RGDFDGDCLHGYIP
Sbjct: 441 RGDFDGDCLHGYIP 454


>ref|XP_004511611.1| PREDICTED: DNA-directed RNA polymerase D subunit 1-like isoform X5
           [Cicer arietinum]
          Length = 1474

 Score =  279 bits (714), Expect = 6e-73
 Identities = 139/259 (53%), Positives = 181/259 (69%), Gaps = 14/259 (5%)
 Frame = -1

Query: 736 VDPKFIEEFVLKPDSLFLTCFPVTPNCNRVVETMHVFSNGQKLIFDERTRAYKRLVDFKQ 557
           VD  FI++++ + D + L+CF V PNC+RV E  H  S G  L FD RTRA K+LVDF+ 
Sbjct: 209 VDSNFIKKYIPRMDLVALSCFLVAPNCHRVTEVPHRLSGGYPLSFDNRTRACKKLVDFRG 268

Query: 556 QADELGLRVRDCLNVSKLNTEKSV--------------DSDSKSGLKWIKEVVLGKRTDH 419
            A+EL  RV DCL  SK+N +K+               ++ + SGL+W+K++VLGKR D 
Sbjct: 269 TANELSSRVLDCLRFSKINPDKTPSNVFTEIQLRKVGENACNSSGLRWMKDIVLGKRNDS 328

Query: 418 GFRMTVIGDPNLKFCEIGVPLDICERLLISETLNTRNWEKLNSCCNMRLLEKGEFYVRRK 239
            FR  V+GDP+L+  EIG+P  I E L +SE +N +N + L  CC +RLLEKG+  V RK
Sbjct: 329 SFRTVVVGDPDLELSEIGLPCQIAEGLQVSEYVNRQNKQNLLYCCELRLLEKGQINVCRK 388

Query: 238 GDLVCVRQINQLQIGDTVYRPLNEGDLLLVNRPPSIHQHSLIALFVKVLPINSVVSLNPV 59
           G  V + +   +QIGD  YRPL +GD +L+NRPPSIHQHS+IAL V+VLPI+SVVS+NP+
Sbjct: 389 GRPVVLFKKEDVQIGDIFYRPLVDGDRVLINRPPSIHQHSMIALTVRVLPISSVVSINPL 448

Query: 58  CCSPLRGDFDGDCLHGYIP 2
           CCSPLRGDFDGDCLHGYIP
Sbjct: 449 CCSPLRGDFDGDCLHGYIP 467