BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Akebia27_contig00020275
         (1142 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004305774.1| PREDICTED: uncharacterized protein LOC101293...   210   1e-51
ref|XP_004233579.1| PREDICTED: uncharacterized protein LOC101260...   207   7e-51
gb|AAM82604.1|AF525305_2 putative AP endonuclease/reverse transc...   204   7e-50
emb|CCA65995.1| hypothetical protein [Beta vulgaris subsp. vulga...   202   3e-49
gb|AAD12028.1| putative non-LTR retroelement reverse transcripta...   199   1e-48
gb|AAB82639.1| putative non-LTR retroelement reverse transcripta...   197   7e-48
ref|XP_004253275.1| PREDICTED: uncharacterized protein LOC101268...   197   9e-48
ref|XP_004250606.1| PREDICTED: uncharacterized protein LOC101247...   196   1e-47
emb|CCA65981.1| hypothetical protein [Beta vulgaris subsp. vulga...   195   3e-47
gb|AAG50806.1|AC079281_8 unknown protein [Arabidopsis thaliana]       194   4e-47
gb|ABE87589.2| RNA-directed DNA polymerase (Reverse transcriptas...   194   6e-47
gb|AAC67331.1| putative non-LTR retroelement reverse transcripta...   192   2e-46
gb|AAC13599.1| similar to reverse transcriptase (Pfam: transcrip...   191   5e-46
ref|XP_004242524.1| PREDICTED: uncharacterized protein LOC101258...   190   8e-46
dbj|BAB09379.1| non-LTR retroelement reverse transcriptase-like ...   189   1e-45
dbj|BAA97290.1| non-LTR retroelement reverse transcriptase-like ...   188   3e-45
dbj|BAF01687.1| hypothetical protein [Arabidopsis thaliana]           188   3e-45
gb|AAD32866.1|AC005489_4 F14N23.4 [Arabidopsis thaliana]              187   5e-45
emb|CCA65979.1| hypothetical protein [Beta vulgaris subsp. vulga...   187   9e-45
dbj|BAF00918.1| putative reverse transcriptase [Arabidopsis thal...   186   1e-44

>ref|XP_004305774.1| PREDICTED: uncharacterized protein LOC101293221 [Fragaria vesca
            subsp. vesca]
          Length = 461

 Score =  210 bits (534), Expect = 1e-51
 Identities = 129/385 (33%), Positives = 207/385 (53%), Gaps = 9/385 (2%)
 Frame = +2

Query: 8    IVLGDFNTVRFQEEKVGGRPASSRSMRDFNELINSIGFHDLRTNSDWFSWSNKSTGGRRI 187
            + +GDFN+V    EK GG P S  S  +F  + ++  F  L T    F+W+N       +
Sbjct: 1    MAIGDFNSVLGAHEKSGGPPPSRISCLEFQNMSDACDFVHLDTVGARFTWTNGCGTRVHV 60

Query: 188  LCRLDRALINMAWVVKFPQMSLSYLPCGVSDHAPLKWEFPRNSTGGPKVFKFFSLWIGKP 367
              RLDR L + +W   +P  S   LP  V DH PL +   + S  GPK F+F S+W+  P
Sbjct: 61   ELRLDRFLCSTSWFEAWPYSSCIALPRVVYDHTPLIFSASKLSPCGPKPFRFQSMWLNHP 120

Query: 368  GLKEVVFNAW-NQEITGTPMFRLTKKIRAVKNSIREWNRNFFGSIHRRKNEAKDNLFRIQ 544
              ++ +   W + +  G PM+ + +K++A+K+ +R WN+  FG +H+  N+A++ L  IQ
Sbjct: 121  TFRDTIATCWTSSKFWGWPMYVIVQKLKALKSCLRNWNKMVFGDVHQNVNKAREALSAIQ 180

Query: 545  NQIRREPMNNNLQGQEVEA-LRVYNSELDNEESMYMQKSRIQWLREGDRNTHFF--YTSV 715
              I    M +     EV+A  RV N+ +  +ES +  ++R++WL +GDR+T FF  Y  V
Sbjct: 181  QDIAIHGMTDQKFEDEVDAKFRVLNA-VKMQESYWKDRARVKWLTDGDRSTSFFHAYAKV 239

Query: 716  AANIARNGIMELVTDQGELLKDEGKIGAWATQFFSEMFRNPNT-----TVSTQVPFNLKF 880
             +  AR   M  + D   +L +   I A    F+  ++ + +T      V + +P +L  
Sbjct: 240  RSASAR---MFSIHDGERILFEPSDIVAHVVGFYQNLYSSSSTPRNLDEVCSVIP-SLVT 295

Query: 881  SAEHVQILSNPITKEEIKSIIFASPRNKSPGPDGFGGEFFSNFWDIVGEDVCVAVLDFFK 1060
            +AE+  +   P T EEIK+ +FA   + +PGPDGF G F+ + WDIVG DV   V  FF 
Sbjct: 296  NAENDWLTVIPST-EEIKNAVFAMDASSAPGPDGFPGCFYQSCWDIVGSDVVACVRQFFM 354

Query: 1061 KGKMLREINATLICLIPKEENANRL 1135
            +  +L  IN   + L+PK ++A+ +
Sbjct: 355  QNWLLPNINCNFLVLLPKVQDAHEI 379


>ref|XP_004233579.1| PREDICTED: uncharacterized protein LOC101260201 [Solanum
            lycopersicum]
          Length = 1531

 Score =  207 bits (527), Expect = 7e-51
 Identities = 112/381 (29%), Positives = 192/381 (50%), Gaps = 2/381 (0%)
 Frame = +2

Query: 2    PWIVLGDFNTVRFQEEKVGGRPASSRSMRDFNELINSIGFHDLRTNSDWFSWSNKSTGGR 181
            PW  +GDFN +   +EK+GGR  +     +F  +I + G  D+  N   ++W N    G 
Sbjct: 419  PWCTIGDFNVISSTQEKLGGREYNINKSLEFISVIEASGLVDIGYNGQHYTWCNHKKNGD 478

Query: 182  RILCRLDRALINMAWVVKFPQMSLSYLPCGVSDHAPLKWEFPRNSTGGPKVFKFFSLWIG 361
            R+  RLDR ++N  W+ K P  S+++LP   SDH PL  E     +   K FKF + W  
Sbjct: 479  RVWKRLDRGMVNDIWLDKMPSSSITHLPSVGSDHCPLLLEMNNTQSTVIKYFKFLNYWTE 538

Query: 362  KPGLKEVVFNAWNQEITGTPMFRLTKKIRAVKNSIREWNRNFFGSIHRRKNEAKDNLFRI 541
                   V N W +++ G PM+ L  K R +  ++R W++N +G +  R  + ++ + R 
Sbjct: 539  NDSFLSTVENCWKRQVKGEPMWILHTKFRRLTKTLRCWSKNEYGDVFERVKQYEEVVKRA 598

Query: 542  QNQIRREPMNNNLQGQEVEALRVYNSELDNEESMYMQKSRIQWLREGDRNTHFFYTSVAA 721
            +  + +E    N + +  EA   Y   L  E ++  QK+++QWL+EGD N+ +F+  +  
Sbjct: 599  EEDLIKENSTENRE-KLSEANANYIKYLKLEHTILQQKTQLQWLKEGDVNSKYFHVVIRG 657

Query: 722  NIARNGIMELVTDQGELLKDEGKIGAWATQFFSEMFRNPNTTVSTQVPFNLK--FSAEHV 895
               +  I +++ D G  ++ E  +   A  ++  MF   +  +  ++  N+    + E  
Sbjct: 658  RRNKMIIYKIMNDSGVWIQGEDNVAKEACDYYQNMFTGKSEKIKEELLQNIPELITLEQN 717

Query: 896  QILSNPITKEEIKSIIFASPRNKSPGPDGFGGEFFSNFWDIVGEDVCVAVLDFFKKGKML 1075
              L    T EE+K+ I +   N +PGPDG GG+F+   +DI+ ED+  AV  FF    M 
Sbjct: 718  SDLDKLPTVEELKNTIMSMNPNSAPGPDGIGGKFYQECFDIIQEDMLAAVNSFFSGNIMP 777

Query: 1076 REINATLICLIPKEENANRLE 1138
            R +    + L+ K  + N+L+
Sbjct: 778  RYMTHACLVLLLKINHPNQLK 798


>gb|AAM82604.1|AF525305_2 putative AP endonuclease/reverse transcriptase [Brassica napus]
          Length = 1214

 Score =  204 bits (518), Expect = 7e-50
 Identities = 124/385 (32%), Positives = 196/385 (50%), Gaps = 7/385 (1%)
 Frame = +2

Query: 2    PWIVLGDFNTVRFQEEKVGGRPASSRSMRDFNELINSIGFHDLRTNSDWFSWSNKSTGGR 181
            PWI+LGDFN      +   G    +R M +F E + +    DL    + ++W N      
Sbjct: 137  PWIILGDFNQSLDPVDASTGGSRITRGMEEFRECLLTSNISDLPFRGNHYTWWNNQENNP 196

Query: 182  RILCRLDRALINMAWVVKFPQMSLSYLPCGVSDHAPLKWEFPRNSTGGPKVFKFFSLWIG 361
             I  ++DR L+N +W++  P    S+     SDH P        S G  K FK  +  + 
Sbjct: 197  -IAKKIDRILVNDSWLIASPLSYGSFCAMEFSDHCPSCVNISNQSGGRNKPFKLSNFLMH 255

Query: 362  KPGLKEVVFNAWNQ-EITGTPMFRLTKKIRAVKNSIREWNRNFFGSIHRRKNEAKDNLFR 538
             P   E +   W++    G+ MF L+KK + +K +IR +NR  +  + +R  +A  NL  
Sbjct: 256  HPEFIEKIRVTWDRLAYQGSAMFTLSKKSKFLKGTIRTFNREHYSGLEKRVVQAAQNLKT 315

Query: 539  IQNQIRREPMNNNLQGQEVEALRVYNSELDNEESMYMQKSRIQWLREGDRNTHFFYTSVA 718
             QN +   P ++ L G E EA R +      EE    QKSR+ WL+ GD NT FF+  + 
Sbjct: 316  CQNNLLAAP-SSYLAGLEKEAHRSWAELALAEERFLCQKSRVLWLKCGDSNTTFFHRMMT 374

Query: 719  ANIARNGIMELVTDQGELLKDEGKIGAWATQFFSEMFRNPNTTVS----TQVPFNLKFSA 886
            A  A N I  L+   G  +++  ++      FF E+F + +  +S    +Q+    +F  
Sbjct: 375  ARRAINEIHYLLDQTGRRIENTDELQTHCVDFFKELFGSSSHLISAEGISQINSLTRFKC 434

Query: 887  EHV--QILSNPITKEEIKSIIFASPRNKSPGPDGFGGEFFSNFWDIVGEDVCVAVLDFFK 1060
            +    Q+L   +++ +IKS  FA P NKSPGPDG+  EFF   W IVG  +  AV +FF+
Sbjct: 435  DENTRQLLEAEVSEADIKSEFFALPSNKSPGPDGYTSEFFKKTWSIVGPSLIAAVQEFFR 494

Query: 1061 KGKMLREINATLICLIPKEENANRL 1135
             G++L + N+T + ++PK+ NA+R+
Sbjct: 495  SGRLLGQWNSTAVTMVPKKPNADRI 519


>emb|CCA65995.1| hypothetical protein [Beta vulgaris subsp. vulgaris]
          Length = 1389

 Score =  202 bits (513), Expect = 3e-49
 Identities = 119/383 (31%), Positives = 188/383 (49%), Gaps = 7/383 (1%)
 Frame = +2

Query: 2    PWIVLGDFNTVRFQEEKVGGRPASSRSMRDFNELINSIGFHDLRTNSDWFSWSNKSTGGR 181
            P+I+LGDFN +    +K+GG P SS        L + +   ++      F+W  K  G  
Sbjct: 136  PFIILGDFNEINSPSDKLGGAPFSSSRAYYMQNLFSQVDCTEISFTGQIFTWRKKKDGPN 195

Query: 182  RILCRLDRALINMAWVVKFPQMSLSYLPCGVSDHAPLKWEFPRNSTGGPKVFKFFSLWIG 361
             I  RLDR + + +W++ FP   L +     SDH  +  E+  N+      F+F  +W  
Sbjct: 196  NIHERLDRGVASTSWLMLFPHAFLKHHIFTSSDHCQISLEYLANNKSKAPPFRFEKMWCT 255

Query: 362  KPGLKEVVFNAWNQEITGTPMFRLTKKIRAVKNSIREWNRNFFGSIHRRKNEAKDNLFRI 541
            +     +V   W  +  G+ MF   +K + VK + +EWN+  FG+I R+  +  + L  I
Sbjct: 256  RKDYDSLVKRTWCTKFYGSHMFNFVQKCKLVKINSKEWNKTQFGNIFRQLRQVDERLEEI 315

Query: 542  QNQIRREPMNNNLQGQEVEALRVYNSELDNEESMYMQKSRIQWLREGDRNTHFFYTSVAA 721
            Q  +  +  N +L+ Q+   L   N  L+   + + QK +  ++  GD N+ F++T  + 
Sbjct: 316  QRNLLIDHNNTSLKTQQELFLAKRNKLLEYNTTYWKQKCKSDFMVLGDTNSKFYHTHASI 375

Query: 722  NIARNGIMELVTDQGELLKDEGKIGAWATQFFSEMF-RNPNTTVSTQVPFNLK---FSAE 889
               RN I E + D  + +     I    T  F + F  NP    +  V FNL     S  
Sbjct: 376  RKYRNQIKEFIPDNAQPITQPDLIEKEITLAFKKRFISNPACKFNQNVDFNLLSPIVSEA 435

Query: 890  HVQILSNPITKEEIKSIIFASPRNKSPGPDGFGGEFFSNFWDIVGEDVCVAVLDFFKKGK 1069
                L++ ++ EEIK+ +F    +KSPGPDGF   FF  +W ++G+ VC AV  FF  G 
Sbjct: 436  DNAYLTSAVSPEEIKNAVFDLAPDKSPGPDGFPPYFFQKYWTLIGKSVCRAVQAFFHSGY 495

Query: 1070 MLREINATLICLIPKEE---NAN 1129
            ML+E+N T + LIPK +   NAN
Sbjct: 496  MLKEVNHTFLALIPKVDKPVNAN 518


>gb|AAD12028.1| putative non-LTR retroelement reverse transcriptase [Arabidopsis
            thaliana]
          Length = 1447

 Score =  199 bits (507), Expect = 1e-48
 Identities = 123/394 (31%), Positives = 196/394 (49%), Gaps = 15/394 (3%)
 Frame = +2

Query: 2    PWIVLGDFNTVRFQEE--KVGGRPASSRSMRDFNELINSIGFHDLRTNSDWFSWSNKSTG 175
            PWI+ GDFN     EE  KV   P  S  MRDF  ++N     D+  +   ++WSNK   
Sbjct: 544  PWIIFGDFNETLELEEHSKVEDNPVVSMGMRDFRSMVNYCSLTDMAHHGPLYTWSNKREH 603

Query: 176  GRRILCRLDRALINMAWVVKFPQMSLSYLPCGVSDHAPLKWEF---PRNSTGGPKVFKFF 346
               I  +LDR ++N  W   FPQ    +   G  DH   +      P +   G + FKF 
Sbjct: 604  DL-IAKKLDRVMVNDVWTQSFPQSYSVFEAGGCLDHLRGRINLNDGPGSIVRGKRPFKFV 662

Query: 347  SLWIGKPGLKEVVFNAWNQE----ITGTPMFRLTKKIRAVKNSIREWNRNFFGSIHRRKN 514
            ++       K  V + W +     ++ + +FR +KK++++K  +R   +   G++ ++  
Sbjct: 663  NVLTEMEDFKPTVDSYWKETEPIFLSTSSLFRFSKKLKSLKPLLRNLAKERLGNLVKKTR 722

Query: 515  EAKDNLFRIQNQIRREPMNNNLQGQEVEALRVYNSELDNEESMYMQKSRIQWLREGDRNT 694
            EA D L + Q      P  N ++ +EVEA   +      EE    +KS++ WL  GD+N 
Sbjct: 723  EAYDTLCKKQESTLNNPTPNAMK-EEVEAHDRWEHVAGLEEKFLKKKSKLHWLDGGDKNN 781

Query: 695  HFFYTSVAANIARNGIMELVTDQGELLKDEGKIGAWATQFFSEMFRN-PN-----TTVST 856
              F+ +V    A+N I E+    G +     +I A+A +FF E  +  PN     T    
Sbjct: 782  KAFHRAVVTREAQNSISEIQCQDGSVTAKGDEIKAYAERFFREFLQLIPNEYEGVTMADL 841

Query: 857  QVPFNLKFSAEHVQILSNPITKEEIKSIIFASPRNKSPGPDGFGGEFFSNFWDIVGEDVC 1036
            Q     + S    ++L+  +T EEIK ++F+ P +KSPGPDGF  EFF   W+I+G +  
Sbjct: 842  QDLLPFRCSETEHELLTRVVTAEEIKKVLFSMPNDKSPGPDGFTSEFFKATWEILGNEFI 901

Query: 1037 VAVLDFFKKGKMLREINATLICLIPKEENANRLE 1138
            +A+  FF KG + + IN T++ LIPK++ A  ++
Sbjct: 902  LAIQSFFAKGFLPKGINTTILALIPKKKEAKEMK 935


>gb|AAB82639.1| putative non-LTR retroelement reverse transcriptase [Arabidopsis
            thaliana]
          Length = 1374

 Score =  197 bits (501), Expect = 7e-48
 Identities = 116/380 (30%), Positives = 193/380 (50%), Gaps = 2/380 (0%)
 Frame = +2

Query: 2    PWIVLGDFNTVRFQEEKVGGRPASSRSMRDFNELINSIGFHDLRTNSDWFSWSNKSTGGR 181
            PW++ GDFN +    EK+GG      S  +F +++NS G  ++  +   FSW   +    
Sbjct: 130  PWMLTGDFNELVDPSEKIGGPARKESSCLEFRQMLNSCGLWEVNHSGYQFSWYG-NRNDE 188

Query: 182  RILCRLDRALINMAWVVKFPQMSLSYLPCGVSDHAPLKWEFPRNSTGGPKVFKFFSLWIG 361
             + CRLDR + N AW+  FPQ   +YL    SDH+PL      ++      FK+   W+ 
Sbjct: 189  LVQCRLDRTVANQAWMELFPQAKATYLQKICSDHSPLINNLVGDNWRKWAGFKYDKRWVQ 248

Query: 362  KPGLKEVVFNAWNQEITGTPMFRLTKKIRAVKNSIREWNRNFFGSIHRRKNEAKDNLFRI 541
            + G K+++ N W+Q+ T T    + +KI + +  I +W R    S   R  E +   F++
Sbjct: 249  REGFKDLLCNFWSQQSTKTNALMM-EKIASCRREISKWKRVSKPSSAVRIQELQ---FKL 304

Query: 542  QNQIRREPMNNNLQGQEVEALRVYNSELDNEESMYMQKSRIQWLREGDRNTHFFYTSVAA 721
                ++ P +     +  + L   + E +NEE  + +KSRI W+R GDRNT +F+ +   
Sbjct: 305  DAATKQIPFDRRELARLKKEL---SQEYNNEEQFWQEKSRIMWMRNGDRNTKYFHAATKN 361

Query: 722  NIARNGIMELVTDQGELLKDEGKIGAWATQFFSEMFRNPNTTVSTQVPFNLK--FSAEHV 895
              A+N I +L+ ++G     +  +G  A  +F ++F + +   + +   NL    S +  
Sbjct: 362  RRAQNRIQKLIDEEGREWTSDEDLGRVAEAYFKKLFASEDVGYTVEELENLTPLVSDQMN 421

Query: 896  QILSNPITKEEIKSIIFASPRNKSPGPDGFGGEFFSNFWDIVGEDVCVAVLDFFKKGKML 1075
              L  PITKEE++   F+   +K PGPDG  G  +  FW+ +G+ +   V  FF+ G + 
Sbjct: 422  NNLLAPITKEEVQRATFSINPHKCPGPDGMNGFLYQQFWETMGDQITEMVQAFFRSGSIE 481

Query: 1076 REINATLICLIPKEENANRL 1135
              +N T ICLIPK   A ++
Sbjct: 482  EGMNKTNICLIPKILKAEKM 501


>ref|XP_004253275.1| PREDICTED: uncharacterized protein LOC101268853 [Solanum
            lycopersicum]
          Length = 1333

 Score =  197 bits (500), Expect = 9e-48
 Identities = 111/385 (28%), Positives = 188/385 (48%), Gaps = 6/385 (1%)
 Frame = +2

Query: 2    PWIVLGDFNTVRFQEEKVGGRPASSRSMRDFNELINSIGFHDLRTNSDWFSWSNKSTGGR 181
            PW ++GDFN +    EK+GGR  +     +F  +I + G  D+  +   ++W N    G 
Sbjct: 75   PWSIIGDFNVITSTSEKLGGRDYNINKSLEFINIIEACGLVDMGYHGQDYTWCNHRKDGA 134

Query: 182  RILCRLDRALINMAWVVKFPQMSLSYLPCGVSDHAPLKWEFPRNSTGGPKVFKFFSLWIG 361
            RI  RLDR + N  W+   P  S+++LP   SDH PL  E     +   K FKF + W  
Sbjct: 135  RIWKRLDRGMTNDKWIETIPHSSITHLPSVGSDHCPLLMEICDIQSNTIKYFKFLNCWTE 194

Query: 362  KPGLKEVVFNAWNQEITGTPMFRLTKKIRAVKNSIREWNRNFFGSIHRRKNEAKDNLFRI 541
                 E V   W +++ G PM+    K+R +  ++R W++  +G +  +    +D + + 
Sbjct: 195  NDSFLETVEKCWKRDVIGNPMWNFHTKLRRLTKTLRIWSKQEYGDVFEKVKLYEDLVKKA 254

Query: 542  QNQIRREPMNNNLQGQEVEALRVYNSEL----DNEESMYMQKSRIQWLREGDRNTHFFYT 709
            +N I      +N   +  E L   N+E       E  +  QK+++ WL+EGD NT +F+T
Sbjct: 255  ENII-----IDNYSAKNSEKLNAINAEYIKFSKMEYKILQQKTQLHWLQEGDANTKYFHT 309

Query: 710  SVAANIARNGIMELVTDQGELLKDEGKIGAWATQFFSEMFRNPNTTVSTQV--PFNLKFS 883
             +     R  I +L+ + G  +K E +I   A  ++ ++F   N  +   +    N   +
Sbjct: 310  VIRGKRNRMSIHKLMDESGNWIKGEEEIAKHACDYYEKIFTGMNGKIKEDILQCINPMIT 369

Query: 884  AEHVQILSNPITKEEIKSIIFASPRNKSPGPDGFGGEFFSNFWDIVGEDVCVAVLDFFKK 1063
             E  + L      +E++  I +   + +PGPDGFGG+F+   +DI+ ED+  AV  F+  
Sbjct: 370  QEQNKDLDRIPDMDELRRTIMSMNPHSAPGPDGFGGKFYQVCFDIIKEDLLAAVKHFYVG 429

Query: 1064 GKMLREINATLICLIPKEENANRLE 1138
              M R +    + LIPK ++  RL+
Sbjct: 430  NIMPRYLTHACLTLIPKIDHPCRLK 454


>ref|XP_004250606.1| PREDICTED: uncharacterized protein LOC101247390 [Solanum
            lycopersicum]
          Length = 612

 Score =  196 bits (499), Expect = 1e-47
 Identities = 111/383 (28%), Positives = 198/383 (51%), Gaps = 5/383 (1%)
 Frame = +2

Query: 2    PWIVLGDFNTVRFQEEKVGGRPASSRSMRDFNELINSIGFHDLRTNSDWFSWSNKSTGGR 181
            PW  +GD+N +   +EK+GG P + R   DF  LI + G  D+  +   F+WSNK     
Sbjct: 103  PWCAVGDYNVIFDVDEKLGGLPYNMRKSMDFIALIEACGLVDIGFSGHRFTWSNKRGFNN 162

Query: 182  RILCRLDRALINMAWVVKFPQMSLSYLPCGVSDHAPLKWEFPRNSTGGPKVFKFFSLWIG 361
            RI  RLDRAL+N  W+ K PQ ++++L    SDH P   E         K F+F + W+ 
Sbjct: 163  RIWKRLDRALVNDLWLEKMPQTTITHLSTTGSDHCPYLLEMVSTEVDRIKYFRFLNCWVD 222

Query: 362  KPGLKEVVFNAWNQEITGTPMFRLTKKIRAVKNSIREWNRNFFGSIHRRKNEAKDNLFRI 541
             P     V N W++ + G  M++  +K++ + N++  W+RN FG I ++    ++ +   
Sbjct: 223  NPNFMLTVKNCWDRPMEGNAMWKFHQKMKRLSNTLSVWSRNEFGDIFQKVRMYEEQVHEA 282

Query: 542  -QNQIRREPMNNNLQGQEVEALRVYNSELDNEESMYMQKSRIQWLREGDRNTHFFYTSVA 718
             +N IR +  +N +   E+ A   Y   L  E+++  QK+++Q  ++GD N  +F++ + 
Sbjct: 283  EENYIRDQTDSNRITLHELNA--QYIKFLKIEDTILKQKTQLQLFKDGDTNFKYFHSIIR 340

Query: 719  ANIARNGIMELVTDQGELLKDEGKIGAWATQFFSEMFRNPNTTVSTQ----VPFNLKFSA 886
            A   +  I +++T+ G+ ++ E  I   A   F+ +F + N  ++ Q    +P  +    
Sbjct: 341  ARRRKLFIHKIITENGDWIQGENNIAQNACDHFNAIFTSENKHINEQNLECIP-RMVNKD 399

Query: 887  EHVQILSNPITKEEIKSIIFASPRNKSPGPDGFGGEFFSNFWDIVGEDVCVAVLDFFKKG 1066
            ++ Q+   P   +E+K ++F+   N + GPDG  G FF    +I+  D+   +  FF   
Sbjct: 400  QNTQLTKLP-DMDELKEVVFSMNPNSAAGPDGMNGYFFKKCLNIIKNDLVEVLHPFFSGQ 458

Query: 1067 KMLREINATLICLIPKEENANRL 1135
             + +  + + I L+PK  N N+L
Sbjct: 459  MIPKYFSHSCIVLLPKVNNTNKL 481


>emb|CCA65981.1| hypothetical protein [Beta vulgaris subsp. vulgaris]
          Length = 1114

 Score =  195 bits (495), Expect = 3e-47
 Identities = 112/379 (29%), Positives = 186/379 (49%), Gaps = 4/379 (1%)
 Frame = +2

Query: 2    PWIVLGDFNTVRFQEEKVGGRPASSRSMRDFNELINSIGFHDLRTNSDWFSWSNKSTGGR 181
            P I++GD+N V   ++++ G   S     D    +      +  T   ++SW+NKS G  
Sbjct: 134  PCILIGDYNAVYSAQDRLNGNDVSEAETSDLRSFVLKAQLLEAPTTGLFYSWNNKSIGAD 193

Query: 182  RILCRLDRALINMAWVVKFPQMSLSYLPCGVSDHAPLKWEFPRNSTGGPKVFKFFSLWIG 361
            RI  R+D++ +N+AW+ ++P + + Y   G+SDH+PL +        G + FKF +    
Sbjct: 194  RISSRIDKSFVNVAWINQYPDVVVEYREAGISDHSPLIFNLATQHDEGGRPFKFLNFLAD 253

Query: 362  KPGLKEVVFNAWNQEITGTPMFRLTKKIRAVKNSIREWNRNFFGSIHRRKNEAKDNLFRI 541
            + G  EVV  AW        M  +  +++AVK +++ ++   F   H +  E +  L  +
Sbjct: 254  QNGFVEVVKEAWGSANHRFKMKNIWVRLQAVKRALKSFHSKKFSKAHCQVEELRRKLAAV 313

Query: 542  QNQIRREPMNNNLQGQEVEALRVYNSELDNEESMYMQKSRIQWLREGDRNTHFFYTSVAA 721
            Q  +      + LQ +E + +         +ES+  QKSRIQWL  GD N+ FF+T++  
Sbjct: 314  Q-ALPEVSQVSELQEEEKDLIAQLRKWSTIDESILKQKSRIQWLSLGDSNSKFFFTAIKV 372

Query: 722  NIARNGIMELVTDQGELLKDEGKIGAWATQFFSEMFRNPNTTVST----QVPFNLKFSAE 889
              ARN I+ L  D+G+ L +  +I      F+  +    ++ +       V    K SA 
Sbjct: 373  RKARNKIVLLQNDRGDQLTENTEIQNEICNFYRRLLGTSSSQLEAIDLHVVRVGAKLSAT 432

Query: 890  HVQILSNPITKEEIKSIIFASPRNKSPGPDGFGGEFFSNFWDIVGEDVCVAVLDFFKKGK 1069
                L  PIT +EI   +      K+PG DGF   FF   W ++ +++   +LDFF+ G 
Sbjct: 433  SCAQLVQPITIQEIDQALADIDDTKAPGLDGFNSVFFKKSWLVIKQEIYEGILDFFENGF 492

Query: 1070 MLREINATLICLIPKEENA 1126
            M + IN T + LIPK + A
Sbjct: 493  MHKPINCTAVTLIPKIDEA 511


>gb|AAG50806.1|AC079281_8 unknown protein [Arabidopsis thaliana]
          Length = 1213

 Score =  194 bits (494), Expect = 4e-47
 Identities = 130/383 (33%), Positives = 195/383 (50%), Gaps = 9/383 (2%)
 Frame = +2

Query: 2    PWIVLGDFNTVRFQEEKVGGRPASSR---SMRDFNELINSIGFHDLRTNSDWFSWSNKST 172
            PW+VLGDFN V   +E     P S     +MRDF + + +    DLR   + F+W NKS 
Sbjct: 138  PWLVLGDFNQVLNPQEH--SNPVSLNVDINMRDFRDCLLAAELSDLRYKGNTFTWWNKSH 195

Query: 173  GGRRILCRLDRALINMAWVVKFPQMSLSYLPCGVSDHAPLKWEFPRNSTGGPKVFKFFSL 352
                +  ++DR L+N +W   FP     +     SDH          S    + FKFF+ 
Sbjct: 196  T-TPVAKKIDRILVNDSWNALFPSSLGIFGSLDFSDHVSCGVVLEETSIKAKRPFKFFNY 254

Query: 353  WIGKPGLKEVVFNAW-NQEITGTPMFRLTKKIRAVKNSIREWNRNFFGSIHRRKNEAKDN 529
             +       +V + W    + G+ MFR++KK++A+K  I++++R  +  + +R  EA D 
Sbjct: 255  LLKNLDFLNLVRDNWFTLNVVGSSMFRVSKKLKALKKPIKDFSRLNYSELEKRTKEAHDF 314

Query: 530  LFRIQNQIRREPMNNNLQGQEVEALRVYNSELDNEESMYMQKSRIQWLREGDRNTHFFYT 709
            L   Q++   +P   N    E+EA R ++     EES + QKSRI W  EGD NT +F+ 
Sbjct: 315  LIGCQDRTLADPTPINASF-ELEAERKWHILTAAEESFFRQKSRISWFAEGDGNTKYFHR 373

Query: 710  SVAANIARNGIMELVTDQGELL-KDEGKIGAWATQFFSEMFRNPNTTVSTQVPFNL---- 874
               A  + N I  L    G+L+   EG +   A+ F S +    +  +  Q   NL    
Sbjct: 374  MADARNSSNSISALYDGNGKLVDSQEGILDLCASYFGSLLGDEVDPYLMEQNDMNLLLSY 433

Query: 875  KFSAEHVQILSNPITKEEIKSIIFASPRNKSPGPDGFGGEFFSNFWDIVGEDVCVAVLDF 1054
            + S   V  L +  + E+I++ +F+ PRNKS GPDGF  EFF + W IVG +V  A+ +F
Sbjct: 434  RCSPAQVCELESTFSNEDIRAALFSLPRNKSCGPDGFTAEFFIDSWSIVGAEVTDAIKEF 493

Query: 1055 FKKGKMLREINATLICLIPKEEN 1123
            F  G +L++ NAT I LIPK  N
Sbjct: 494  FSSGCLLKQWNATTIVLIPKIVN 516


>gb|ABE87589.2| RNA-directed DNA polymerase (Reverse transcriptase); Ribonuclease H;
            Endonuclease/exonuclease/phosphatase [Medicago
            truncatula]
          Length = 1246

 Score =  194 bits (493), Expect = 6e-47
 Identities = 121/384 (31%), Positives = 183/384 (47%), Gaps = 9/384 (2%)
 Frame = +2

Query: 2    PWIVLGDFNTVRFQEEKVGGRPASSRSMRDFNELINSIGFHDLRTNSDWFSWSNKSTGGR 181
            PW+ +GDFN V    EK   RP    S  DF    N+   H L T   +++WSN   G  
Sbjct: 131  PWLFIGDFNAVLGAHEKRRRRPPPPLSCIDFMNWSNANLLHHLPTLGAFYTWSNGRLGSD 190

Query: 182  RILCRLDRALINMAWVVKFPQMSLSYLPCGV-----SDHAPLKWEFPRNSTGGPKVFKFF 346
             +  RLDRA+ N  WV  +   S S L         SDH PL       ++     FKFF
Sbjct: 191  NVALRLDRAICNEEWVNFWRSSSCSALGNSALVRHQSDHHPLLMSMDFCTSQRSGNFKFF 250

Query: 347  SLWIGKPGLKEVVFNAWNQEITGTPMFRLTKKIRAVKNSIREWNRNFFGSIHRRKNEAKD 526
              W      + +V   W++   G  M RL  K++ +K   R WNR  FG + R+   A +
Sbjct: 251  KTWTEHEDCRRIVAENWSKHTRGHGMTRLQAKLKHMKQVFRHWNRTVFGDVDRKVRMAVE 310

Query: 527  NLFRIQNQIRREPMNNNLQGQEVEALRVYNSELDNEESMYMQKSRIQWLREGDRNTHFFY 706
             + RIQ  I     ++ L  QE+EA  +    L  ++ ++ +K R Q    GDRNT +F+
Sbjct: 311  EVNRIQQIIDSVGFSDQLYAQELEAHLILTKALHYQDELWREKLRDQRFIHGDRNTAYFH 370

Query: 707  TSVAANIARNGIMELVTDQGELLKDEGKIGAWATQFFSEMFRNPNTTVSTQVPF----NL 874
                    +N I   + D   ++ D  +I      +F  +F   N+ +   +      +L
Sbjct: 371  RISKVRATKNTI-SFLQDGDAVITDPARIEVHVLNYFQAIFSVDNSCIQNDLVVDTIPSL 429

Query: 875  KFSAEHVQILSNPITKEEIKSIIFASPRNKSPGPDGFGGEFFSNFWDIVGEDVCVAVLDF 1054
              + ++  +L  P+   E+K+ +F    + +PGP+GFGG F+  +WDIVG DV  +V DF
Sbjct: 430  VSNVDNNSLLRLPLW-GEVKNAVFTLNGDGAPGPNGFGGHFYQTYWDIVGADVIQSVQDF 488

Query: 1055 FKKGKMLREINATLICLIPKEENA 1126
            F  G++ + IN+ LI LIPK   A
Sbjct: 489  FISGQLAQNINSNLIVLIPKVPGA 512


>gb|AAC67331.1| putative non-LTR retroelement reverse transcriptase [Arabidopsis
            thaliana]
          Length = 1449

 Score =  192 bits (489), Expect = 2e-46
 Identities = 120/396 (30%), Positives = 200/396 (50%), Gaps = 17/396 (4%)
 Frame = +2

Query: 2    PWIVLGDFNTVRFQEE--KVGGRPASSRSMRDFNELINSIGFHDLRTNSDWFSWSNKSTG 175
            PWI+ GDFN +   +E  ++   PA +  MRDF  L+N   F DL ++   F+W NK   
Sbjct: 551  PWIIFGDFNEILDMDEHSRMEDHPAVTSGMRDFQSLVNYCSFSDLASHGPLFTWCNKRDN 610

Query: 176  GRRILCRLDRALINMAWVVKFPQMSLSYLPCGVSDHAPLKWEFPRNSTG---GPKVFKFF 346
               I  +LDR ++N AW + +PQ    +   G SDH   +     NS     G K FKF 
Sbjct: 611  DP-IWKKLDRVMVNEAWKMVYPQSYNVFEAGGCSDHLRCRINLNMNSGAQVRGNKPFKFV 669

Query: 347  SLWIGKPGLKEVVFNAWNQ----EITGTPMFRLTKKIRAVKNSIREWNRNFFGSIHRRKN 514
            +        K +V N W +     ++ + +FR TKK++A+K  +R   +   G++ +R  
Sbjct: 670  NAVADMEEFKPLVENFWRETEPIHMSTSSLFRFTKKLKALKPKLRGLAKEKMGNLVKRTR 729

Query: 515  EAKDNLFRIQNQIRREPMNNNLQGQEVEALRVYNSELDNEESMYMQKSRIQWLREGDRNT 694
            EA  +L + Q    + P    ++  E EA   ++     EE    Q S++ WL+ GD+N 
Sbjct: 730  EAYLSLCQAQQSNSQNPSQRAME-IESEAYVRWDRIASIEEKYLKQVSKLHWLKVGDKNN 788

Query: 695  HFFYTSVAANIARNGIMELVTDQGELLKDEGKIGAWATQFFSEMFRN-PNT-------TV 850
              F+ +  A  A+N I E+  + G     +  I     +FF E  +  PN         +
Sbjct: 789  KTFHRAATARAAQNSIREIQKEDGSTATTKDDIKNETERFFQEFLQLIPNDYEGITVEKL 848

Query: 851  STQVPFNLKFSAEHVQILSNPITKEEIKSIIFASPRNKSPGPDGFGGEFFSNFWDIVGED 1030
            ++ +P++   S     +L+  ++ +EI+  +F+ P +KSPGPDG+  EF+   WDI+G +
Sbjct: 849  TSLLPYHC--SPAEKDMLTASVSAKEIRGALFSMPNDKSPGPDGYTSEFYKRAWDIIGAE 906

Query: 1031 VCVAVLDFFKKGKMLREINATLICLIPKEENANRLE 1138
              +AV  FF+KG + + +N T++ LIPK+  A  ++
Sbjct: 907  FVLAVKSFFEKGFLPKGVNTTILALIPKKLEAKEMK 942


>gb|AAC13599.1| similar to reverse transcriptase (Pfam: transcript_fact.hmm, score:
            72.31) [Arabidopsis thaliana]
          Length = 928

 Score =  191 bits (485), Expect = 5e-46
 Identities = 119/394 (30%), Positives = 196/394 (49%), Gaps = 15/394 (3%)
 Frame = +2

Query: 2    PWIVLGDFNTVRFQEEKVGGR--PASSRSMRDFNELINSIGFHDLRTNSDWFSWSNKSTG 175
            PWI+ GDFN +   EE    R  P ++  MRDF   +N     DL  +   F+WSNK   
Sbjct: 24   PWIIFGDFNEILDMEEHSNSRENPVTTTGMRDFQMAVNHCSITDLAYHGPLFTWSNKREN 83

Query: 176  GRRILCRLDRALINMAWVVKFPQMSLSYLPCGVSDHAPLKWEFPRNSTG---GPKVFKFF 346
               I  +LDR L+N  W+  FP+    +   G SDH   +      +     G + FKF 
Sbjct: 84   DL-IAKKLDRVLVNDVWLQSFPRSYSVFEAGGCSDHLRCRINLNVGAGAVVKGKRPFKFV 142

Query: 347  SLWIGKPGLKEVVFNAWNQE----ITGTPMFRLTKKIRAVKNSIREWNRNFFGSIHRRKN 514
            ++          V + WN+     ++ + +FR +KK++ +K  +R   +   G++ ++  
Sbjct: 143  NVITEMEHFIPTVESYWNETEAIFMSTSSLFRFSKKLKGLKPLLRNLGKERLGNLVKQTK 202

Query: 515  EAKDNLFRIQNQIRREPMNNNLQGQEVEALRVYNSELDNEESMYMQKSRIQWLREGDRNT 694
            EA + L + Q      P  +++Q +E EA   ++     EE    Q+S++ WL  GDRN 
Sbjct: 203  EAFETLCQKQAMKMANPSPSSMQ-EENEAYAKWDHIAVLEEKFLKQRSKLHWLDIGDRNN 261

Query: 695  HFFYTSVAANIARNGIMELVTDQGELLKDEGKIGAWATQFFSEMFRN-PNTTVSTQVP-- 865
              F+ +V A  A+N I E++   G +   E KI   A   F E  +  PN      V   
Sbjct: 262  KAFHRAVVAREAQNSIREIICHDGSVASQEEKIKTEAEHHFREFLQLIPNDFEGIAVEEL 321

Query: 866  ---FNLKFSAEHVQILSNPITKEEIKSIIFASPRNKSPGPDGFGGEFFSNFWDIVGEDVC 1036
                  + S    ++L+N ++ EEI  ++F+ P +KSPGPDG+  EF+   W+I+G +  
Sbjct: 322  QDLLPYRCSDSDKEMLTNHVSAEEIHKVVFSMPNDKSPGPDGYTAEFYKGAWNIIGAEFI 381

Query: 1037 VAVLDFFKKGKMLREINATLICLIPKEENANRLE 1138
            +A+  FF KG + + IN+T++ LIPK++ A  ++
Sbjct: 382  LAIQSFFAKGFLPKGINSTILALIPKKKEAKEMK 415


>ref|XP_004242524.1| PREDICTED: uncharacterized protein LOC101258077 [Solanum
            lycopersicum]
          Length = 1454

 Score =  190 bits (483), Expect = 8e-46
 Identities = 112/381 (29%), Positives = 186/381 (48%), Gaps = 6/381 (1%)
 Frame = +2

Query: 17   GDFNTVRFQEEKVGGRPASSRSMRDFNELINSIGFHDLRTNSDWFSWSNKSTGGRRILCR 196
            GDFN +    EK+GGR  +     +F  +I + G  D+  +   F+W N    G RI  R
Sbjct: 202  GDFNVITSISEKLGGRDYNINKSLEFITIIEACGLVDMGYHGQNFTWCNHRRDGARIWKR 261

Query: 197  LDRALINMAWVVKFPQMSLSYLPCGVSDHAPLKWEFPRNSTGGPKVFKFFSLWIGKPGLK 376
            LDR + N  WV   P  S+++LP   SDH+PL  E     +   K FKF + W       
Sbjct: 262  LDRGMTNDKWVETMPHSSITHLPSVGSDHSPLLLEIGDIQSNIIKYFKFLNCWTENDNFL 321

Query: 377  EVVFNAWNQEITGTPMFRLTKKIRAVKNSIREWNRNFFGSIHRRKNEAKDNLFRIQNQIR 556
              V N W +E+TG PM+ L  K+R +  ++R W++  +G +  R    ++ + + +N   
Sbjct: 322  ATVENCWKREVTGNPMWILHTKLRRLTKTLRGWSKQEYGDVFERVKHYEELVKQAEND-- 379

Query: 557  REPMNNNLQGQEVEALRVYNSE----LDNEESMYMQKSRIQWLREGDRNTHFFYTSVAAN 724
               M  N     +E L V N++    L  E ++  QK+ + WL+EGD NT +F+  +   
Sbjct: 380  ---MFLNNSPANIEKLNVVNAKYIKYLKVEHNILQQKTHLHWLKEGDANTKYFHALIRGK 436

Query: 725  IARNGIMELVTDQGELLKDEGKIGAWATQFFSEMFRNPNTTVSTQ--VPFNLKFSAEHVQ 898
              R  I +L+ D G  ++ E KI   A  ++ + F      +  +     N   +     
Sbjct: 437  RNRIAIHKLMDDNGNWIQGEDKIAKLACDYYEQNFTGKAEKIKEENLHCINKMVTQAQND 496

Query: 899  ILSNPITKEEIKSIIFASPRNKSPGPDGFGGEFFSNFWDIVGEDVCVAVLDFFKKGKMLR 1078
             L     ++E++ II +   N +PGPDGFGG+F+   +DI+ +D+  AV  F+    M +
Sbjct: 497  DLDRLPDEDELRRIIMSMNPNSAPGPDGFGGKFYQTCFDIIKKDLLAAVNYFYIGNSMPK 556

Query: 1079 EINATLICLIPKEENANRLEK 1141
             +    + L+PK E+  +L++
Sbjct: 557  YMTHACLILLPKVEHPCKLKE 577


>dbj|BAB09379.1| non-LTR retroelement reverse transcriptase-like protein [Arabidopsis
            thaliana]
          Length = 1223

 Score =  189 bits (481), Expect = 1e-45
 Identities = 129/396 (32%), Positives = 197/396 (49%), Gaps = 17/396 (4%)
 Frame = +2

Query: 2    PWIVLGDFN-TVRFQEEKVGG-RPASSRSMRDFNELINSIGFHDLRTNSDWFSWSNKSTG 175
            PW +LGDFN T+   E       P  +  MRDF ++IN     D+      F+W NK   
Sbjct: 136  PWTLLGDFNETLDIAEHSQSFVHPMVTPGMRDFQQVINYCSLTDMAAQGPLFTWCNKREH 195

Query: 176  GRRILCRLDRALINMAWVVKFPQMSLSYLPCGVSDHAPLKWEFPRNSTGGPKV-----FK 340
            G  I+ +LDR LIN  W   F Q    +   G SDH  L+     NS  G KV     FK
Sbjct: 196  GL-IMKKLDRVLINDCWNQTFSQSYSVFEAGGCSDH--LRCRISLNSEAGNKVQGLKPFK 252

Query: 341  FFSLWIGKPGLKEVVFNAWNQE----ITGTPMFRLTKKIRAVKNSIREWNRNFFGSIHRR 508
            F +        K +V   W       ++ + +FR +K ++ +K  IR   R+  G++ ++
Sbjct: 253  FVNALTDMEDFKPMVSTYWKDTEPLILSTSTLFRFSKNLKGLKPKIRSMARDRLGNLSKK 312

Query: 509  KNEAKDNLFRIQNQIRREPMNNNLQGQEVEALRVYNSELDNEESMYMQKSRIQWLREGDR 688
             NEA   L   Q+     P +  ++ +E  A   ++     EE    QKS++ W + GD+
Sbjct: 313  ANEAYKILCAKQHVNLTNPSSMAME-EENAAYSRWDRVAILEEKYLKQKSKLHWCQVGDQ 371

Query: 689  NTHFFYTSVAANIARNGIMELVTDQGELLKDEGKIGAWATQFFSEMFRN-PN-----TTV 850
            NT  F+ + AA  A N I E++++ G +     +I A A +FF E  +  PN     T  
Sbjct: 372  NTKAFHRAAAAREAHNTIREILSNDGIVKTKGDEIKAEAERFFREFLQLIPNDFEGVTIT 431

Query: 851  STQVPFNLKFSAEHVQILSNPITKEEIKSIIFASPRNKSPGPDGFGGEFFSNFWDIVGED 1030
              Q    ++ S    Q L  P+T EEI+ ++F  P +KSPGPDG+  EFF   W+I+G++
Sbjct: 432  ELQQLLPVRCSDADQQSLIRPVTAEEIRKVLFRMPSDKSPGPDGYTSEFFKATWEIIGDE 491

Query: 1031 VCVAVLDFFKKGKMLREINATLICLIPKEENANRLE 1138
              +AV  FF KG + + IN+T++ LIPK+  A  ++
Sbjct: 492  FTLAVQSFFTKGFLPKGINSTILALIPKKTEAREMK 527


>dbj|BAA97290.1| non-LTR retroelement reverse transcriptase-like [Arabidopsis
            thaliana]
          Length = 1072

 Score =  188 bits (478), Expect = 3e-45
 Identities = 124/381 (32%), Positives = 189/381 (49%), Gaps = 9/381 (2%)
 Frame = +2

Query: 11   VLGDFNTVRFQEEKVGGRPAS---SRSMRDFNELINSIGFHDLRTNSDWFSWSNKSTGGR 181
            +LGDFN V   +E     P S    R MRDF   ++ +   DL    + F+W NKS+  R
Sbjct: 1    MLGDFNQVLLPQEH--SNPPSLNIDRRMRDFGSCLSEMELSDLVFKGNSFTWWNKSSI-R 57

Query: 182  RILCRLDRALINMAWVVKFPQMSLSYLPCGVSDHAPLKWEFPRNSTGGPKVFKFFSLWIG 361
             I  +LDR L N +W   +P     +     SDH         N     + FKFF+  + 
Sbjct: 58   PIAKKLDRILANDSWCNLYPSSHGLFGNLDFSDHVSCGVVLEANGISAKRPFKFFNFLLK 117

Query: 362  KPGLKEVVFNAW-NQEITGTPMFRLTKKIRAVKNSIREWNRNFFGSIHRRKNEAKDNLFR 538
                  VV + W +  + G+ M+R++KK++A+K  I++++R  +  I  R  EA + L  
Sbjct: 118  NEDFLNVVMDNWFSTNVVGSSMYRVSKKLKAMKKPIKDFSRLNYSGIELRTKEAHELLIT 177

Query: 539  IQNQIRREPMNNNLQGQEVEALRVYNSELDNEESMYMQKSRIQWLREGDRNTHFFYTSVA 718
             QN     P  +N    E+EA R +      EES + Q+SR+ W  EGD NTH+F+  V 
Sbjct: 178  CQNLTLANPSVSNA-ALELEAQRKWVLLSCAEESFFHQRSRVSWFAEGDSNTHYFHRMVD 236

Query: 719  ANIARNGIMELVTDQGELLKDEGKIGAWATQFFSEMFRNPNTTVST-QVPFNL----KFS 883
            +  + N I  LV   G L+  +  I      ++  +  +  +  S  Q   NL    + S
Sbjct: 237  SRKSFNTINSLVDSNGLLIDSQQGILDHCVTYYERLLGSIESPFSMEQEDMNLLLTYRCS 296

Query: 884  AEHVQILSNPITKEEIKSIIFASPRNKSPGPDGFGGEFFSNFWDIVGEDVCVAVLDFFKK 1063
             +    L    T +EIK+   + PRNK+ GPDG+  EFF + W I+G +V  A+ +FF  
Sbjct: 297  QDQCSELEKSFTDDEIKAAFKSLPRNKTSGPDGYSVEFFRDTWSIIGPEVLAAIHEFFDS 356

Query: 1064 GKMLREINATLICLIPKEENA 1126
            G++L++ NAT + LIPK  NA
Sbjct: 357  GQLLKQWNATTLVLIPKTSNA 377


>dbj|BAF01687.1| hypothetical protein [Arabidopsis thaliana]
          Length = 1072

 Score =  188 bits (478), Expect = 3e-45
 Identities = 124/381 (32%), Positives = 189/381 (49%), Gaps = 9/381 (2%)
 Frame = +2

Query: 11   VLGDFNTVRFQEEKVGGRPAS---SRSMRDFNELINSIGFHDLRTNSDWFSWSNKSTGGR 181
            +LGDFN V   +E     P S    R MRDF   ++ +   DL    + F+W NKS+  R
Sbjct: 1    MLGDFNQVLLPQEH--SNPPSLNIDRRMRDFGSCLSEMELSDLVFKGNSFTWWNKSSI-R 57

Query: 182  RILCRLDRALINMAWVVKFPQMSLSYLPCGVSDHAPLKWEFPRNSTGGPKVFKFFSLWIG 361
             I  +LDR L N +W   +P     +     SDH         N     + FKFF+  + 
Sbjct: 58   PIAKKLDRILANDSWCNLYPSSHGLFGNLDFSDHVSCGVVLEANGISAKRPFKFFNFLLK 117

Query: 362  KPGLKEVVFNAW-NQEITGTPMFRLTKKIRAVKNSIREWNRNFFGSIHRRKNEAKDNLFR 538
                  VV + W +  + G+ M+R++KK++A+K  I++++R  +  I  R  EA + L  
Sbjct: 118  NEDFLNVVMDNWFSTNVVGSSMYRVSKKLKAMKKPIKDFSRLNYSGIELRTKEAHELLIT 177

Query: 539  IQNQIRREPMNNNLQGQEVEALRVYNSELDNEESMYMQKSRIQWLREGDRNTHFFYTSVA 718
             QN     P  +N    E+EA R +      EES + Q+SR+ W  EGD NTH+F+  V 
Sbjct: 178  CQNLTLANPSVSNA-ALELEAQRKWVLLSCAEESFFHQRSRVSWFAEGDSNTHYFHRMVD 236

Query: 719  ANIARNGIMELVTDQGELLKDEGKIGAWATQFFSEMFRNPNTTVST-QVPFNL----KFS 883
            +  + N I  LV   G L+  +  I      ++  +  +  +  S  Q   NL    + S
Sbjct: 237  SRKSFNTINSLVDSNGLLIDSQQGILDHCVTYYERLLGSIESPFSMEQEDMNLLLTYRCS 296

Query: 884  AEHVQILSNPITKEEIKSIIFASPRNKSPGPDGFGGEFFSNFWDIVGEDVCVAVLDFFKK 1063
             +    L    T +EIK+   + PRNK+ GPDG+  EFF + W I+G +V  A+ +FF  
Sbjct: 297  QDQCSELEKSFTDDEIKAAFKSLPRNKTSGPDGYSVEFFRDTWSIIGPEVLAAIHEFFDS 356

Query: 1064 GKMLREINATLICLIPKEENA 1126
            G++L++ NAT + LIPK  NA
Sbjct: 357  GQLLKQWNATTLVLIPKTSNA 377


>gb|AAD32866.1|AC005489_4 F14N23.4 [Arabidopsis thaliana]
          Length = 1161

 Score =  187 bits (476), Expect = 5e-45
 Identities = 130/394 (32%), Positives = 188/394 (47%), Gaps = 16/394 (4%)
 Frame = +2

Query: 2    PWIVLGDFNTVRFQEE--KVGGRPASSRSMRDFNELINSIGFHDLRTNSDWFSWSNKSTG 175
            PW++LGDFN +    E   +     + R M D    +      DL +   +F+WSN    
Sbjct: 179  PWLLLGDFNQIAAASEHYSINQSLLNLRGMEDLQCCLRDSQLSDLPSRGVFFTWSNHQQD 238

Query: 176  GRRILCRLDRALINMAWVVKFPQMSLSYLPCGVSDHAPLKWEFPRNSTGGPKVFKFFSLW 355
               IL +LDRAL N  W   FP     + P G SDHAP             K FK+FS  
Sbjct: 239  NP-ILRKLDRALANGEWFAVFPSALAVFDPPGDSDHAPCIILIDNQPPPSKKSFKYFSFL 297

Query: 356  IGKPGLKEVVFNAWNQE-ITGTPMFRLTKKIRAVKNSIREWNRNFFGSIHRRKNEAKDNL 532
               P     +  AW +  + G+ MF L + ++  K   R  NR  F +I +R  ++   L
Sbjct: 298  SSHPSYLAALSTAWEENTLVGSHMFSLRQHLKVAKLCCRTLNRLRFSNIQQRTAQSLTRL 357

Query: 533  FRIQNQIRREPMNNNLQGQEVEALRVYNSELDNEESMYMQKSRIQWLREGDRNTHFFYTS 712
              IQ ++   P +   + + V A + +       ES + QKSRI+WL EGD NT FF+ +
Sbjct: 358  EDIQVELLTSPSDTLFRREHV-ARKQWIFFAAALESFFRQKSRIRWLHEGDANTRFFHRA 416

Query: 713  VAANIARNGIMELVTDQGELLKDEGKIGAWATQFFSEMFRNPNTTVSTQVPFNLKFSAEH 892
            V A+ A N I  L  D G  +++  +I      ++S +   P+  V+        FS E 
Sbjct: 417  VIAHQATNLIKFLRGDDGFRVENVDQIKGMLIAYYSHLLGIPSENVTP-------FSVEK 469

Query: 893  VQ---------ILSNPIT----KEEIKSIIFASPRNKSPGPDGFGGEFFSNFWDIVGEDV 1033
            ++          L++ +T    +EEI  ++F+ PRNK+PGPDGF  EFF   W IV   V
Sbjct: 470  IKGLLPFRCDSFLASQLTTIPSEEEITQVLFSMPRNKAPGPDGFPVEFFIEAWAIVKSSV 529

Query: 1034 CVAVLDFFKKGKMLREINATLICLIPKEENANRL 1135
              A+ +FF  G + R  NAT I LIPK   A+RL
Sbjct: 530  VAAIREFFISGNLPRGFNATAITLIPKVTGADRL 563


>emb|CCA65979.1| hypothetical protein [Beta vulgaris subsp. vulgaris]
          Length = 1110

 Score =  187 bits (474), Expect = 9e-45
 Identities = 107/387 (27%), Positives = 190/387 (49%), Gaps = 7/387 (1%)
 Frame = +2

Query: 2    PWIVLGDFNTVRFQEEKVGGRPASSRSMRDFNELINSIGFHDLRTNSDWFSWSNKSTGGR 181
            P I++GDFN V    +++ G   +     DF + +      + R+   ++SWSN S G  
Sbjct: 131  PMIIIGDFNAVCHSNDRLYGTLVTDAETEDFQQFLLQSNLIESRSTWSYYSWSNSSIGRD 190

Query: 182  RILCRLDRALINMAWVVKFPQMSLSYLPCGVSDHAPLKWEFPRNSTGGPKVFKFFSLWIG 361
            R+L R+D+A +N+ W+  + ++S+ YLP G+SDH+PL +        G K FKF ++   
Sbjct: 191  RVLSRIDKAYVNLVWLGMYAEVSVQYLPPGISDHSPLLFNLMTGRPQGGKPFKFMNVMAE 250

Query: 362  KPGLKEVVFNAWNQEITGTPMFRLTKKIRAVKNSIREWNRNFFGSIHRRKNEAKDNLFRI 541
            +    E V  AWN       +  +   ++AVK  +++      G  H +    +  L  +
Sbjct: 251  QGEFLETVEKAWNSVNGRFKLQAIWLNLKAVKRELKQMKTQKIGLAHEKVKNLRHQLQDL 310

Query: 542  QNQIRREPMNNNLQGQEVEALRVYNSELDNEESMYMQKSRIQWLREGDRNTHFFYTSVAA 721
            Q+Q   +  N+ +Q      +         E+S+  QKSRI WL++GD N+  F+T+V A
Sbjct: 311  QSQDDFD-HNDIMQTDAKSIMNDLRHWSHIEDSILQQKSRITWLQQGDTNSKLFFTAVKA 369

Query: 722  NIARNGIMELVTDQGELLKDEGKIGAWATQFFSEMFRNPNTTVSTQVPFNLK-------F 880
              A N I  L T+ G +++D  ++     +F+ ++     T  ST +  +L         
Sbjct: 370  RHAINRIDMLNTEDGRVIQDADEVQEEILEFYKKLL---GTRASTLMGVDLNTVRGGKCL 426

Query: 881  SAEHVQILSNPITKEEIKSIIFASPRNKSPGPDGFGGEFFSNFWDIVGEDVCVAVLDFFK 1060
            SA+  + L   +   EI   +     +K+PG DGF   FF   W  + +++   + +FF 
Sbjct: 427  SAQAKESLIREVASTEIDEALAGIGNDKAPGLDGFNAYFFKKSWGSIKQEIYAGIQEFFN 486

Query: 1061 KGKMLREINATLICLIPKEENANRLEK 1141
              +M R IN  ++ L+PK ++A R+++
Sbjct: 487  NSRMHRPINCIVVTLLPKVQHATRVKE 513


>dbj|BAF00918.1| putative reverse transcriptase [Arabidopsis thaliana]
          Length = 910

 Score =  186 bits (473), Expect = 1e-44
 Identities = 130/394 (32%), Positives = 187/394 (47%), Gaps = 16/394 (4%)
 Frame = +2

Query: 2    PWIVLGDFNTVRFQEE--KVGGRPASSRSMRDFNELINSIGFHDLRTNSDWFSWSNKSTG 175
            PW++LGDFN +    E   +     + R M D    +      DL +   +F+WSN    
Sbjct: 136  PWLLLGDFNQIAAASEHYSINQSLLNLRGMEDLQCCLRDSQLSDLPSRGVFFTWSNHQQD 195

Query: 176  GRRILCRLDRALINMAWVVKFPQMSLSYLPCGVSDHAPLKWEFPRNSTGGPKVFKFFSLW 355
               IL +LDRAL N  W   FP     + P G SDHAP             K FK+FS  
Sbjct: 196  NP-ILRKLDRALANGEWFAVFPSALAVFDPPGDSDHAPCIILIDNQPPPSKKSFKYFSFL 254

Query: 356  IGKPGLKEVVFNAWNQE-ITGTPMFRLTKKIRAVKNSIREWNRNFFGSIHRRKNEAKDNL 532
               P     +  AW    + G+ MF L + ++  K   R  NR  F +I +R  ++   L
Sbjct: 255  SSHPSYLAALSTAWEANTLVGSHMFSLRQHLKVAKLCCRTLNRLRFSNIQQRTAQSLTRL 314

Query: 533  FRIQNQIRREPMNNNLQGQEVEALRVYNSELDNEESMYMQKSRIQWLREGDRNTHFFYTS 712
              IQ ++   P +   + + V A + +       ES + QKSRI+WL EGD NT FF+ +
Sbjct: 315  EDIQVELLTSPSDTLFRREHV-ARKQWIFFAAALESFFRQKSRIRWLHEGDANTRFFHRA 373

Query: 713  VAANIARNGIMELVTDQGELLKDEGKIGAWATQFFSEMFRNPNTTVSTQVPFNLKFSAEH 892
            V A+ A N I  L  D G  +++  +I      ++S +   P+  V+        FS E 
Sbjct: 374  VIAHQATNLIKFLRGDDGFRVENVDQIKGMLIAYYSHLLGIPSENVTP-------FSVEK 426

Query: 893  VQ---------ILSNPIT----KEEIKSIIFASPRNKSPGPDGFGGEFFSNFWDIVGEDV 1033
            ++          L++ +T    +EEI  ++F+ PRNK+PGPDGF  EFF   W IV   V
Sbjct: 427  IKGLLPFRCDSFLASQLTTIPSEEEITQVLFSMPRNKAPGPDGFPVEFFIEAWAIVKSSV 486

Query: 1034 CVAVLDFFKKGKMLREINATLICLIPKEENANRL 1135
              A+ +FF  G + R  NAT I LIPK   A+RL
Sbjct: 487  VAAIREFFISGNLPRGFNATAITLIPKVTGADRL 520