BLASTX nr result
ID: Akebia27_contig00018963
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Akebia27_contig00018963
(420 letters)
Database: ./nr
38,876,450 sequences; 13,856,398,315 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_007010535.1| Replication factor C subunit 1 [Theobroma ca... 69 5e-15
ref|XP_002265891.2| PREDICTED: replication factor C subunit 1-li... 79 9e-13
emb|CBI24290.3| unnamed protein product [Vitis vinifera] 79 9e-13
gb|EXB57307.1| Replication factor C subunit 1 [Morus notabilis] 60 2e-12
ref|XP_007199003.1| hypothetical protein PRUPE_ppa000922mg [Prun... 62 3e-12
ref|XP_007132512.1| hypothetical protein PHAVU_011G100500g [Phas... 70 1e-11
ref|XP_004156105.1| PREDICTED: replication factor C subunit 1-li... 75 1e-11
ref|XP_006592363.1| PREDICTED: replication factor C subunit 1-li... 67 2e-11
ref|XP_006592364.1| PREDICTED: replication factor C subunit 1-li... 67 2e-11
ref|XP_006343612.1| PREDICTED: replication factor C subunit 1-li... 69 4e-11
ref|XP_006343613.1| PREDICTED: replication factor C subunit 1-li... 69 4e-11
ref|XP_004242616.1| PREDICTED: replication factor C subunit 1-li... 73 5e-11
ref|XP_004140268.1| PREDICTED: replication factor C subunit 1-li... 72 1e-10
dbj|BAC76085.1| replication factor C 110 kDa subunit [Oryza sati... 57 2e-10
ref|NP_001068123.1| Os11g0572100 [Oryza sativa Japonica Group] g... 57 2e-10
ref|XP_002298160.2| hypothetical protein POPTR_0001s22140g [Popu... 63 4e-10
ref|XP_006826419.1| hypothetical protein AMTR_s00004p00160120 [A... 69 7e-10
ref|XP_004506246.1| PREDICTED: replication factor C subunit 1-li... 68 2e-09
ref|XP_006582373.1| PREDICTED: replication factor C subunit 1-li... 64 3e-09
gb|EMT17883.1| Replication factor C subunit 1 [Aegilops tauschii] 57 4e-09
>ref|XP_007010535.1| Replication factor C subunit 1 [Theobroma cacao]
gi|508727448|gb|EOY19345.1| Replication factor C subunit
1 [Theobroma cacao]
Length = 1012
Score = 69.3 bits (168), Expect(2) = 5e-15
Identities = 39/81 (48%), Positives = 43/81 (53%)
Frame = -2
Query: 419 MSDIRKWFMKQHDKNNGNASKPGKPATTDLPPEKSSPASTKLEKSGHSGQESSGRRKTSK 240
MSDIRKWFMK HDK GNASKP PA T+ S G+E+SGRRKTSK
Sbjct: 1 MSDIRKWFMKAHDKGKGNASKPANPAPTN-------------TDSVPGGRENSGRRKTSK 47
Query: 239 YFGTDTQKXXXXXXXXEKPRK 177
YF Q+ E P K
Sbjct: 48 YFPAGKQQPKGEQGTEELPAK 68
Score = 37.0 bits (84), Expect(2) = 5e-15
Identities = 24/64 (37%), Positives = 31/64 (48%)
Frame = -1
Query: 192 RKTQKSSEELHNDLKPPSVKKLHKVXXXXDFLLPNARKNSEVTPXXXXXXXXXXGIVQKS 13
RK Q +E + KPP KK KV DF+LP +R +VTP G+ QK+
Sbjct: 69 RKVQNENESVE---KPPPSKKPSKVGIDDDFVLPKSRNTVDVTPSKKRKSGSGRGVAQKA 125
Query: 12 VDID 1
D D
Sbjct: 126 EDND 129
>ref|XP_002265891.2| PREDICTED: replication factor C subunit 1-like [Vitis vinifera]
Length = 933
Score = 78.6 bits (192), Expect = 9e-13
Identities = 43/80 (53%), Positives = 47/80 (58%)
Frame = -2
Query: 416 SDIRKWFMKQHDKNNGNASKPGKPATTDLPPEKSSPASTKLEKSGHSGQESSGRRKTSKY 237
SDIRKWFMK+HD +NGN KP KP K SPA+ + EK H GQESS RRKTSKY
Sbjct: 6 SDIRKWFMKKHDNDNGNPLKPAKPEPKASQSGKPSPATVQQEKPVHGGQESSCRRKTSKY 65
Query: 236 FGTDTQKXXXXXXXXEKPRK 177
F QK E P K
Sbjct: 66 F----QKPKDEKEMEELPAK 81
>emb|CBI24290.3| unnamed protein product [Vitis vinifera]
Length = 941
Score = 78.6 bits (192), Expect = 9e-13
Identities = 43/80 (53%), Positives = 47/80 (58%)
Frame = -2
Query: 416 SDIRKWFMKQHDKNNGNASKPGKPATTDLPPEKSSPASTKLEKSGHSGQESSGRRKTSKY 237
SDIRKWFMK+HD +NGN KP KP K SPA+ + EK H GQESS RRKTSKY
Sbjct: 6 SDIRKWFMKKHDNDNGNPLKPAKPEPKASQSGKPSPATVQQEKPVHGGQESSCRRKTSKY 65
Query: 236 FGTDTQKXXXXXXXXEKPRK 177
F QK E P K
Sbjct: 66 F----QKPKDEKEMEELPAK 81
>gb|EXB57307.1| Replication factor C subunit 1 [Morus notabilis]
Length = 1047
Score = 59.7 bits (143), Expect(2) = 2e-12
Identities = 35/68 (51%), Positives = 40/68 (58%), Gaps = 1/68 (1%)
Frame = -2
Query: 416 SDIRKWFMKQHDKNNGN-ASKPGKPATTDLPPEKSSPASTKLEKSGHSGQESSGRRKTSK 240
SDIRKWFMK H+K NGN ASKP K A LP E+ Q++SGRRKTSK
Sbjct: 88 SDIRKWFMKSHEKGNGNSASKPAKSAQA-LP-----------EEPVQGSQDNSGRRKTSK 135
Query: 239 YFGTDTQK 216
YF + K
Sbjct: 136 YFSAEKPK 143
Score = 37.7 bits (86), Expect(2) = 2e-12
Identities = 27/65 (41%), Positives = 33/65 (50%), Gaps = 1/65 (1%)
Frame = -1
Query: 192 RKTQKSSEELHNDLKPPSVKKLHKVXXXXDFLLPNAR-KNSEVTPXXXXXXXXXXGIVQK 16
RKTQ S E+ +KP KK+HKV DF+LPN + K TP G QK
Sbjct: 155 RKTQTDSHEM---VKPSPAKKIHKVDDDDDFVLPNTKEKPVASTPRKKLKSGSGRGTGQK 211
Query: 15 SVDID 1
+DID
Sbjct: 212 PLDID 216
>ref|XP_007199003.1| hypothetical protein PRUPE_ppa000922mg [Prunus persica]
gi|462394403|gb|EMJ00202.1| hypothetical protein
PRUPE_ppa000922mg [Prunus persica]
Length = 961
Score = 62.0 bits (149), Expect(2) = 3e-12
Identities = 31/67 (46%), Positives = 39/67 (58%)
Frame = -2
Query: 416 SDIRKWFMKQHDKNNGNASKPGKPATTDLPPEKSSPASTKLEKSGHSGQESSGRRKTSKY 237
+DIRKWFMK HDK NG +K +P +++ + H GQE+ GRRKTSKY
Sbjct: 3 ADIRKWFMKSHDKGNG---------------KKPAPTTSQTPSTVHGGQENPGRRKTSKY 47
Query: 236 FGTDTQK 216
F TD K
Sbjct: 48 FTTDKPK 54
Score = 35.0 bits (79), Expect(2) = 3e-12
Identities = 26/66 (39%), Positives = 35/66 (53%), Gaps = 2/66 (3%)
Frame = -1
Query: 192 RKTQKSSEELHNDLKPPSVKKLHK-VXXXXDFLLPNARKNS-EVTPXXXXXXXXXXGIVQ 19
RKT K +E +KP KK+HK V DF+LP+++KNS + TP G+ Q
Sbjct: 65 RKTHKEPDE---SVKPSPAKKVHKVVDDDDDFVLPHSKKNSVDATPSKKLKSASGVGVPQ 121
Query: 18 KSVDID 1
K ID
Sbjct: 122 KLTAID 127
>ref|XP_007132512.1| hypothetical protein PHAVU_011G100500g [Phaseolus vulgaris]
gi|561005512|gb|ESW04506.1| hypothetical protein
PHAVU_011G100500g [Phaseolus vulgaris]
Length = 938
Score = 70.5 bits (171), Expect(2) = 1e-11
Identities = 42/82 (51%), Positives = 47/82 (57%), Gaps = 1/82 (1%)
Frame = -2
Query: 419 MSDIRKWFMKQHDKNNGNASKPGKPATTDLPP-EKSSPASTKLEKSGHSGQESSGRRKTS 243
MSDIRKWFMK HDK GN + P KP+ P +K P EK+ GQESSGRR TS
Sbjct: 1 MSDIRKWFMKSHDK--GNNAAPSKPSNQPKPSSDKPQP-----EKNVAGGQESSGRRVTS 53
Query: 242 KYFGTDTQKXXXXXXXXEKPRK 177
KYF T+ QK E P K
Sbjct: 54 KYFNTNKQKVKEEKETQELPAK 75
Score = 24.6 bits (52), Expect(2) = 1e-11
Identities = 19/64 (29%), Positives = 28/64 (43%)
Frame = -1
Query: 192 RKTQKSSEELHNDLKPPSVKKLHKVXXXXDFLLPNARKNSEVTPXXXXXXXXXXGIVQKS 13
RK K SE+ P K++H+ L N +K +E TP GI +KS
Sbjct: 76 RKNVKDSEDT------PEPKRVHEDVGDDSVLPTNKKKLAEATPTKKLKSGSGRGIPKKS 129
Query: 12 VDID 1
V ++
Sbjct: 130 VVLE 133
>ref|XP_004156105.1| PREDICTED: replication factor C subunit 1-like [Cucumis sativus]
Length = 942
Score = 74.7 bits (182), Expect = 1e-11
Identities = 41/81 (50%), Positives = 51/81 (62%)
Frame = -2
Query: 419 MSDIRKWFMKQHDKNNGNASKPGKPATTDLPPEKSSPASTKLEKSGHSGQESSGRRKTSK 240
M DIRKWFMK HDK+NG+ SK KPA + L EKS+ A K+G SG ES+GR+ TSK
Sbjct: 1 MGDIRKWFMKAHDKDNGSGSKKAKPAPSSL--EKSASAG----KTGPSGGESAGRQITSK 54
Query: 239 YFGTDTQKXXXXXXXXEKPRK 177
YF ++ Q+ E P K
Sbjct: 55 YFASEKQEAKDAEETEESPAK 75
>ref|XP_006592363.1| PREDICTED: replication factor C subunit 1-like isoform X1 [Glycine
max]
Length = 949
Score = 66.6 bits (161), Expect(2) = 2e-11
Identities = 41/81 (50%), Positives = 45/81 (55%)
Frame = -2
Query: 419 MSDIRKWFMKQHDKNNGNASKPGKPATTDLPPEKSSPASTKLEKSGHSGQESSGRRKTSK 240
MSDIRKWFMK HDK N AS KP+ P P S EK+ GQESSGRR TSK
Sbjct: 1 MSDIRKWFMKTHDKGNNAASS--KPSNQP-KPSSDKPQS---EKTVAGGQESSGRRITSK 54
Query: 239 YFGTDTQKXXXXXXXXEKPRK 177
YF ++ QK E P K
Sbjct: 55 YFNSNKQKGKDKKEMQELPAK 75
Score = 27.3 bits (59), Expect(2) = 2e-11
Identities = 19/64 (29%), Positives = 28/64 (43%)
Frame = -1
Query: 192 RKTQKSSEELHNDLKPPSVKKLHKVXXXXDFLLPNARKNSEVTPXXXXXXXXXXGIVQKS 13
RK K SEE+ P KK+H+ L N +K ++ TP G+ QKS
Sbjct: 76 RKNMKDSEEI------PEPKKIHEDDGDDSVLPTNKKKLADTTPTKKLKSGSGRGLPQKS 129
Query: 12 VDID 1
++
Sbjct: 130 AVLE 133
>ref|XP_006592364.1| PREDICTED: replication factor C subunit 1-like isoform X2 [Glycine
max]
Length = 947
Score = 66.6 bits (161), Expect(2) = 2e-11
Identities = 41/81 (50%), Positives = 45/81 (55%)
Frame = -2
Query: 419 MSDIRKWFMKQHDKNNGNASKPGKPATTDLPPEKSSPASTKLEKSGHSGQESSGRRKTSK 240
MSDIRKWFMK HDK N AS KP+ P P S EK+ GQESSGRR TSK
Sbjct: 1 MSDIRKWFMKTHDKGNNAASS--KPSNQP-KPSSDKPQS---EKTVAGGQESSGRRITSK 54
Query: 239 YFGTDTQKXXXXXXXXEKPRK 177
YF ++ QK E P K
Sbjct: 55 YFNSNKQKGKDKKEMQELPAK 75
Score = 27.3 bits (59), Expect(2) = 2e-11
Identities = 19/64 (29%), Positives = 28/64 (43%)
Frame = -1
Query: 192 RKTQKSSEELHNDLKPPSVKKLHKVXXXXDFLLPNARKNSEVTPXXXXXXXXXXGIVQKS 13
RK K SEE+ P KK+H+ L N +K ++ TP G+ QKS
Sbjct: 76 RKNMKDSEEI------PEPKKIHEDDGDDSVLPTNKKKLADTTPTKKLKSGSGRGLPQKS 129
Query: 12 VDID 1
++
Sbjct: 130 AVLE 133
>ref|XP_006343612.1| PREDICTED: replication factor C subunit 1-like isoform X1 [Solanum
tuberosum]
Length = 993
Score = 68.6 bits (166), Expect(2) = 4e-11
Identities = 38/68 (55%), Positives = 40/68 (58%)
Frame = -2
Query: 419 MSDIRKWFMKQHDKNNGNASKPGKPATTDLPPEKSSPASTKLEKSGHSGQESSGRRKTSK 240
MSDIRKWFMKQHDK GN S A EK S S K E GQE++ RRKTSK
Sbjct: 1 MSDIRKWFMKQHDKGTGNGSMSKNSAA-----EKPSLISPKPENLVQEGQETTNRRKTSK 55
Query: 239 YFGTDTQK 216
YF TD K
Sbjct: 56 YFATDKVK 63
Score = 24.6 bits (52), Expect(2) = 4e-11
Identities = 11/32 (34%), Positives = 18/32 (56%)
Frame = -1
Query: 192 RKTQKSSEELHNDLKPPSVKKLHKVXXXXDFL 97
RK Q ++ + +PP+ KK+HK DF+
Sbjct: 76 RKAQSTAGSSSANERPPAAKKIHKAEDDDDFV 107
>ref|XP_006343613.1| PREDICTED: replication factor C subunit 1-like isoform X2 [Solanum
tuberosum]
Length = 992
Score = 68.6 bits (166), Expect(2) = 4e-11
Identities = 38/68 (55%), Positives = 40/68 (58%)
Frame = -2
Query: 419 MSDIRKWFMKQHDKNNGNASKPGKPATTDLPPEKSSPASTKLEKSGHSGQESSGRRKTSK 240
MSDIRKWFMKQHDK GN S A EK S S K E GQE++ RRKTSK
Sbjct: 1 MSDIRKWFMKQHDKGTGNGSMSKNSAA-----EKPSLISPKPENLVQEGQETTNRRKTSK 55
Query: 239 YFGTDTQK 216
YF TD K
Sbjct: 56 YFATDKVK 63
Score = 24.6 bits (52), Expect(2) = 4e-11
Identities = 11/32 (34%), Positives = 18/32 (56%)
Frame = -1
Query: 192 RKTQKSSEELHNDLKPPSVKKLHKVXXXXDFL 97
RK Q ++ + +PP+ KK+HK DF+
Sbjct: 76 RKAQSTAGSSSANERPPAAKKIHKAEDDDDFV 107
>ref|XP_004242616.1| PREDICTED: replication factor C subunit 1-like [Solanum
lycopersicum]
Length = 1012
Score = 72.8 bits (177), Expect = 5e-11
Identities = 39/68 (57%), Positives = 41/68 (60%)
Frame = -2
Query: 419 MSDIRKWFMKQHDKNNGNASKPGKPATTDLPPEKSSPASTKLEKSGHSGQESSGRRKTSK 240
MSDIRKWFMKQHDK GN S A EK SP S K E GQE++ RRKTSK
Sbjct: 1 MSDIRKWFMKQHDKGTGNGSMSKNSAA-----EKPSPTSPKPENLVQEGQETANRRKTSK 55
Query: 239 YFGTDTQK 216
YF TD K
Sbjct: 56 YFATDKVK 63
>ref|XP_004140268.1| PREDICTED: replication factor C subunit 1-like [Cucumis sativus]
Length = 981
Score = 71.6 bits (174), Expect = 1e-10
Identities = 38/68 (55%), Positives = 48/68 (70%)
Frame = -2
Query: 419 MSDIRKWFMKQHDKNNGNASKPGKPATTDLPPEKSSPASTKLEKSGHSGQESSGRRKTSK 240
M DIRKWFMK HDK+NG+ SK KPA + L EKS+ A K+G SG ES+GR+ TSK
Sbjct: 1 MGDIRKWFMKAHDKDNGSGSKKAKPAPSSL--EKSASAG----KTGPSGGESAGRQITSK 54
Query: 239 YFGTDTQK 216
YF ++ Q+
Sbjct: 55 YFASEKQE 62
>dbj|BAC76085.1| replication factor C 110 kDa subunit [Oryza sativa Japonica Group]
Length = 1021
Score = 57.0 bits (136), Expect(2) = 2e-10
Identities = 34/71 (47%), Positives = 38/71 (53%), Gaps = 4/71 (5%)
Frame = -2
Query: 416 SDIRKWFMKQHDKNNGNASKPGKPATTDLP----PEKSSPASTKLEKSGHSGQESSGRRK 249
SDIRKWFMK DKN G A G A P PEK S A + Q+ S RRK
Sbjct: 3 SDIRKWFMKAQDKNGGAAKPAGTTALAKKPVLSIPEKPSAAPS----MAACDQDCSARRK 58
Query: 248 TSKYFGTDTQK 216
TSKYF + T+K
Sbjct: 59 TSKYFASKTEK 69
Score = 33.9 bits (76), Expect(2) = 2e-10
Identities = 21/56 (37%), Positives = 28/56 (50%), Gaps = 3/56 (5%)
Frame = -1
Query: 219 KGXXXXXXXRKTQKSSEELHNDLKPPSVKKLHKV---XXXXDFLLPNARKNSEVTP 61
KG RK QK S+EL +D+KP K++HK DF+ P+ RK P
Sbjct: 77 KGTGRGLPKRKLQKVSDELEDDMKPLPAKEVHKEEEDDDDDDFVAPSKRKTPVKPP 132
>ref|NP_001068123.1| Os11g0572100 [Oryza sativa Japonica Group]
gi|122248776|sp|Q2R2B4.2|RFC1_ORYSJ RecName:
Full=Replication factor C subunit 1; Short=OsRFC1;
AltName: Full=Activator 1 large subunit; AltName:
Full=Activator 1 subunit 1 gi|108864532|gb|ABA94349.2|
BRCA1 C Terminus domain containing protein, expressed
[Oryza sativa Japonica Group]
gi|113645345|dbj|BAF28486.1| Os11g0572100 [Oryza sativa
Japonica Group] gi|215697840|dbj|BAG92033.1| unnamed
protein product [Oryza sativa Japonica Group]
Length = 1021
Score = 57.0 bits (136), Expect(2) = 2e-10
Identities = 34/71 (47%), Positives = 38/71 (53%), Gaps = 4/71 (5%)
Frame = -2
Query: 416 SDIRKWFMKQHDKNNGNASKPGKPATTDLP----PEKSSPASTKLEKSGHSGQESSGRRK 249
SDIRKWFMK DKN G A G A P PEK S A + Q+ S RRK
Sbjct: 3 SDIRKWFMKAQDKNGGAAKPAGTTALAKKPVLSIPEKPSAAPS----MAACDQDCSARRK 58
Query: 248 TSKYFGTDTQK 216
TSKYF + T+K
Sbjct: 59 TSKYFASKTEK 69
Score = 33.9 bits (76), Expect(2) = 2e-10
Identities = 21/56 (37%), Positives = 28/56 (50%), Gaps = 3/56 (5%)
Frame = -1
Query: 219 KGXXXXXXXRKTQKSSEELHNDLKPPSVKKLHKV---XXXXDFLLPNARKNSEVTP 61
KG RK QK S+EL +D+KP K++HK DF+ P+ RK P
Sbjct: 77 KGTGRGLPKRKLQKVSDELEDDMKPLPAKEVHKEEEDDDDDDFVAPSKRKTPVKPP 132
>ref|XP_002298160.2| hypothetical protein POPTR_0001s22140g [Populus trichocarpa]
gi|550347876|gb|EEE82965.2| hypothetical protein
POPTR_0001s22140g [Populus trichocarpa]
Length = 981
Score = 63.2 bits (152), Expect(2) = 4e-10
Identities = 35/79 (44%), Positives = 40/79 (50%)
Frame = -2
Query: 413 DIRKWFMKQHDKNNGNASKPGKPATTDLPPEKSSPASTKLEKSGHSGQESSGRRKTSKYF 234
DIRKWFMK HDK N NA+ + +K P K E GQE SGRRKTSKYF
Sbjct: 4 DIRKWFMKAHDKGNDNAATNAE--------KKPPPTEPKTETPVCGGQEGSGRRKTSKYF 55
Query: 233 GTDTQKXXXXXXXXEKPRK 177
+ QK + P K
Sbjct: 56 AANKQKQKEDKEIEDLPAK 74
Score = 26.6 bits (57), Expect(2) = 4e-10
Identities = 20/64 (31%), Positives = 31/64 (48%), Gaps = 3/64 (4%)
Frame = -1
Query: 183 QKSSEELHNDLKPPSVKKLHKV---XXXXDFLLPNARKNSEVTPXXXXXXXXXXGIVQKS 13
+K+ + +KPP KK+HKV DF LP +K ++ +P GI QK
Sbjct: 75 RKAQNDGVQSVKPPPSKKVHKVDDEEEDDDFSLP--KKKNDASPSKKLKSSSGRGIAQKP 132
Query: 12 VDID 1
V ++
Sbjct: 133 VHVN 136
>ref|XP_006826419.1| hypothetical protein AMTR_s00004p00160120 [Amborella trichopoda]
gi|548830733|gb|ERM93656.1| hypothetical protein
AMTR_s00004p00160120 [Amborella trichopoda]
Length = 725
Score = 68.9 bits (167), Expect = 7e-10
Identities = 38/64 (59%), Positives = 41/64 (64%)
Frame = -2
Query: 419 MSDIRKWFMKQHDKNNGNASKPGKPATTDLPPEKSSPASTKLEKSGHSGQESSGRRKTSK 240
MSDIRKWFMKQHDK NG +S+P KPATT P K P+S EK RRKTSK
Sbjct: 1 MSDIRKWFMKQHDKGNGASSQPSKPATTVSQPSK--PSSVTEEK-------KETRRKTSK 51
Query: 239 YFGT 228
YF T
Sbjct: 52 YFAT 55
>ref|XP_004506246.1| PREDICTED: replication factor C subunit 1-like [Cicer arietinum]
Length = 997
Score = 67.8 bits (164), Expect = 2e-09
Identities = 35/68 (51%), Positives = 41/68 (60%)
Frame = -2
Query: 419 MSDIRKWFMKQHDKNNGNASKPGKPATTDLPPEKSSPASTKLEKSGHSGQESSGRRKTSK 240
MSDIRKWFMK H+K N A+ +P +K SP +K+ GQ SSGRRKTSK
Sbjct: 1 MSDIRKWFMKSHEKTNNAAANSNQP-------KKPSPVKPDPDKTVPEGQSSSGRRKTSK 53
Query: 239 YFGTDTQK 216
YF TD K
Sbjct: 54 YFNTDKPK 61
>ref|XP_006582373.1| PREDICTED: replication factor C subunit 1-like [Glycine max]
Length = 938
Score = 64.3 bits (155), Expect(2) = 3e-09
Identities = 39/81 (48%), Positives = 42/81 (51%)
Frame = -2
Query: 419 MSDIRKWFMKQHDKNNGNASKPGKPATTDLPPEKSSPASTKLEKSGHSGQESSGRRKTSK 240
MSDIRKWFMK HDK N AS P P S EK+ GQESSGRR TSK
Sbjct: 1 MSDIRKWFMKTHDKGNNAASSK---------PSSDKPQS---EKTVAGGQESSGRRITSK 48
Query: 239 YFGTDTQKXXXXXXXXEKPRK 177
YF ++ QK E P K
Sbjct: 49 YFNSNKQKGKDEKEKQELPAK 69
Score = 22.7 bits (47), Expect(2) = 3e-09
Identities = 19/64 (29%), Positives = 26/64 (40%)
Frame = -1
Query: 192 RKTQKSSEELHNDLKPPSVKKLHKVXXXXDFLLPNARKNSEVTPXXXXXXXXXXGIVQKS 13
RK K SEE+H D SV L N +K ++ TP GI +KS
Sbjct: 70 RKNAKDSEEIHEDDGDDSV------------LPTNKKKLADTTPTKKLKSGSGRGIPKKS 117
Query: 12 VDID 1
++
Sbjct: 118 AVLE 121
>gb|EMT17883.1| Replication factor C subunit 1 [Aegilops tauschii]
Length = 1058
Score = 57.4 bits (137), Expect(2) = 4e-09
Identities = 38/92 (41%), Positives = 48/92 (52%), Gaps = 8/92 (8%)
Frame = -2
Query: 416 SDIRKWFMKQHDKNNGNASKP----GKPATTDLP----PEKSSPASTKLEKSGHSGQESS 261
SDIRKWFMK HDKN G A+KP PA P PEK++ +S Q++S
Sbjct: 32 SDIRKWFMKPHDKNAG-AAKPSAAGAAPAAAKKPVLSIPEKAATSSVP------GNQDAS 84
Query: 260 GRRKTSKYFGTDTQKXXXXXXXXEKPRKVVRN 165
RRKTSKYF T+K RK+ ++
Sbjct: 85 VRRKTSKYFAPKTEKDADVAEKSSSKRKLQKS 116
Score = 28.9 bits (63), Expect(2) = 4e-09
Identities = 18/46 (39%), Positives = 25/46 (54%), Gaps = 2/46 (4%)
Frame = -1
Query: 192 RKTQKSSEELHNDLKPPSVKKLHK--VXXXXDFLLPNARKNSEVTP 61
RK QKSSE+L +D+KP + K K DF+ P+ +K P
Sbjct: 111 RKLQKSSEDLEDDIKPFAANKALKDEEDDDDDFVAPSKKKTPVKPP 156