BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Akebia27_contig00018521
         (745 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_006606105.1| PREDICTED: DNA mismatch repair protein MSH3-...    60   8e-07
ref|XP_006606104.1| PREDICTED: DNA mismatch repair protein MSH3-...    60   8e-07
ref|XP_007038668.1| DNA mismatch repair protein MSH3 isoform 1 [...    59   1e-06
ref|XP_004496581.1| PREDICTED: DNA mismatch repair protein MSH3-...    57   7e-06

>ref|XP_006606105.1| PREDICTED: DNA mismatch repair protein MSH3-like isoform X2 [Glycine
            max]
          Length = 991

 Score = 60.1 bits (144), Expect = 8e-07
 Identities = 39/112 (34%), Positives = 61/112 (54%)
 Frame = -1

Query: 745  IARAAVMAAKLEAVVRTRVGSRLTQTLLMETRSIQKEDKVQENIWKHSNCPHGDQFGGYS 566
            I+RA VMA+KLEA+V +R+  R T+ LL++T  I +E                +Q    S
Sbjct: 894  ISRAIVMASKLEALVNSRIHGRSTKELLLDTLVIGQEK---------------EQLMAQS 938

Query: 565  VDKQQDFRELSKAYHELFLNLKSLLVDADHVKSLTPLKYAHNLAVKMMNREM 410
            +D+    +E   AY + +LNLK+   D D  KS   L++A ++A K++ R M
Sbjct: 939  LDRPH--KEFDMAYKDFYLNLKAATEDDDWAKSFHLLEHARSIAKKLIGRSM 988


>ref|XP_006606104.1| PREDICTED: DNA mismatch repair protein MSH3-like isoform X1 [Glycine
            max]
          Length = 1070

 Score = 60.1 bits (144), Expect = 8e-07
 Identities = 39/112 (34%), Positives = 61/112 (54%)
 Frame = -1

Query: 745  IARAAVMAAKLEAVVRTRVGSRLTQTLLMETRSIQKEDKVQENIWKHSNCPHGDQFGGYS 566
            I+RA VMA+KLEA+V +R+  R T+ LL++T  I +E                +Q    S
Sbjct: 973  ISRAIVMASKLEALVNSRIHGRSTKELLLDTLVIGQEK---------------EQLMAQS 1017

Query: 565  VDKQQDFRELSKAYHELFLNLKSLLVDADHVKSLTPLKYAHNLAVKMMNREM 410
            +D+    +E   AY + +LNLK+   D D  KS   L++A ++A K++ R M
Sbjct: 1018 LDRPH--KEFDMAYKDFYLNLKAATEDDDWAKSFHLLEHARSIAKKLIGRSM 1067


>ref|XP_007038668.1| DNA mismatch repair protein MSH3 isoform 1 [Theobroma cacao]
            gi|508775913|gb|EOY23169.1| DNA mismatch repair protein
            MSH3 isoform 1 [Theobroma cacao]
          Length = 1115

 Score = 59.3 bits (142), Expect = 1e-06
 Identities = 38/110 (34%), Positives = 62/110 (56%)
 Frame = -1

Query: 745  IARAAVMAAKLEAVVRTRVGSRLTQTLLMETRSIQKEDKVQENIWKHSNCPHGDQFGGYS 566
            I++A +MA +LEA+  +RV  + ++    ET S  +E + QENI K          G +S
Sbjct: 1015 ISQAIIMATRLEAIESSRVRKK-SEERQPETSSSDQELETQENILK--------SIGSFS 1065

Query: 565  VDKQQDFRELSKAYHELFLNLKSLLVDADHVKSLTPLKYAHNLAVKMMNR 416
             ++ ++  E + A+ +L LNLKS   D D  KS   LK A ++A +++NR
Sbjct: 1066 SERLENLEEFASAFSDLLLNLKSARTDDDLGKSFQLLKEARSIAKELINR 1115


>ref|XP_004496581.1| PREDICTED: DNA mismatch repair protein MSH3-like isoform X1 [Cicer
            arietinum]
          Length = 1076

 Score = 57.0 bits (136), Expect = 7e-06
 Identities = 35/112 (31%), Positives = 58/112 (51%)
 Frame = -1

Query: 745  IARAAVMAAKLEAVVRTRVGSRLTQTLLMETRSIQKEDKVQENIWKHSNCPHGDQFGGYS 566
            I+RA VMA+KLEA+V  R+  R  + LL++   I ++ +  +       CP         
Sbjct: 987  ISRAIVMASKLEALVNNRIHGRSGKELLLDAPVIDEDQEPHD-------CPR-------- 1031

Query: 565  VDKQQDFRELSKAYHELFLNLKSLLVDADHVKSLTPLKYAHNLAVKMMNREM 410
                   +E  +AY E + NLK+ ++D DH KS   L+ A ++A  +++R M
Sbjct: 1032 -------QEFGRAYKEFYSNLKAAILDDDHAKSFQLLENARSIAKSLISRSM 1076