BLASTX nr result

ID: Akebia27_contig00018389 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Akebia27_contig00018389
         (408 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|EYU41634.1| hypothetical protein MIMGU_mgv1a011248mg [Mimulus...    60   4e-07
emb|CBI24515.3| unnamed protein product [Vitis vinifera]               59   7e-07
ref|XP_002267474.1| PREDICTED: probable rRNA-processing protein ...    59   7e-07
ref|XP_002321847.2| rRNA processing protein EBP2 [Populus tricho...    55   8e-06
ref|XP_004957675.1| PREDICTED: probable rRNA-processing protein ...    55   8e-06

>gb|EYU41634.1| hypothetical protein MIMGU_mgv1a011248mg [Mimulus guttatus]
          Length = 288

 Score = 59.7 bits (143), Expect = 4e-07
 Identities = 36/81 (44%), Positives = 41/81 (50%)
 Frame = -3

Query: 406 GKGFERSKKRRPGVAPGDRSXXXXXXXXXXXXXXXXXXXXXRDHRDSXXXXXXXXXXXKQ 227
           GK FERS K+RPGVAPGDRS                     RD +DS           KQ
Sbjct: 206 GKSFERSSKKRPGVAPGDRS---GGKARQGGGGFKKGFDKKRDRKDSKFGFGGRKGMKKQ 262

Query: 226 NTSDTTNDFRAFNKGSDFQGN 164
           NT++TTNDFR F+K S F  N
Sbjct: 263 NTAETTNDFRGFSKSSKFPSN 283


>emb|CBI24515.3| unnamed protein product [Vitis vinifera]
          Length = 185

 Score = 58.9 bits (141), Expect = 7e-07
 Identities = 33/75 (44%), Positives = 40/75 (53%)
 Frame = -3

Query: 406 GKGFERSKKRRPGVAPGDRSXXXXXXXXXXXXXXXXXXXXXRDHRDSXXXXXXXXXXXKQ 227
           GK FERS KRRPGVAPGDRS                     RD+++S           KQ
Sbjct: 101 GKAFERSNKRRPGVAPGDRSGGKARQFGGNGKKGMEKNKKKRDNKNSKFGFGGRKGLKKQ 160

Query: 226 NTSDTTNDFRAFNKG 182
           N+++TT+DFR FNKG
Sbjct: 161 NSTETTDDFRGFNKG 175


>ref|XP_002267474.1| PREDICTED: probable rRNA-processing protein EBP2 homolog [Vitis
           vinifera]
          Length = 302

 Score = 58.9 bits (141), Expect = 7e-07
 Identities = 33/75 (44%), Positives = 40/75 (53%)
 Frame = -3

Query: 406 GKGFERSKKRRPGVAPGDRSXXXXXXXXXXXXXXXXXXXXXRDHRDSXXXXXXXXXXXKQ 227
           GK FERS KRRPGVAPGDRS                     RD+++S           KQ
Sbjct: 218 GKAFERSNKRRPGVAPGDRSGGKARQFGGNGKKGMEKNKKKRDNKNSKFGFGGRKGLKKQ 277

Query: 226 NTSDTTNDFRAFNKG 182
           N+++TT+DFR FNKG
Sbjct: 278 NSTETTDDFRGFNKG 292


>ref|XP_002321847.2| rRNA processing protein EBP2 [Populus trichocarpa]
           gi|550322704|gb|EEF05974.2| rRNA processing protein EBP2
           [Populus trichocarpa]
          Length = 300

 Score = 55.5 bits (132), Expect = 8e-06
 Identities = 33/76 (43%), Positives = 38/76 (50%)
 Frame = -3

Query: 406 GKGFERSKKRRPGVAPGDRSXXXXXXXXXXXXXXXXXXXXXRDHRDSXXXXXXXXXXXKQ 227
           GK FERS K+RPGV+PGDRS                     R+ RDS           KQ
Sbjct: 216 GKVFERSNKKRPGVSPGDRSGGKGRQPWKKGKNGPEKKKFKRESRDSKFGFGGRKGLKKQ 275

Query: 226 NTSDTTNDFRAFNKGS 179
           NT+DTT+DFR   KGS
Sbjct: 276 NTADTTDDFRGSKKGS 291


>ref|XP_004957675.1| PREDICTED: probable rRNA-processing protein EBP2 homolog [Setaria
           italica]
          Length = 287

 Score = 55.5 bits (132), Expect = 8e-06
 Identities = 32/78 (41%), Positives = 41/78 (52%)
 Frame = -3

Query: 403 KGFERSKKRRPGVAPGDRSXXXXXXXXXXXXXXXXXXXXXRDHRDSXXXXXXXXXXXKQN 224
           +GF++SKK+RPGV+PGDRS                        RD+           KQN
Sbjct: 212 EGFKQSKKKRPGVSPGDRSGGLAKRGKEGKNRRS---------RDAKFGHGGRKGLKKQN 262

Query: 223 TSDTTNDFRAFNKGSDFQ 170
           T+DTTNDFR+FNKG + Q
Sbjct: 263 TADTTNDFRSFNKGGESQ 280


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