BLASTX nr result
ID: Akebia27_contig00017593
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Akebia27_contig00017593
(343 letters)
Database: ./nr
38,876,450 sequences; 13,856,398,315 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002302625.1| DEAD box RNA helicase family protein [Populu... 50 1e-11
ref|XP_002320859.2| hypothetical protein POPTR_0014s09330g [Popu... 52 1e-11
ref|XP_004154493.1| PREDICTED: LOW QUALITY PROTEIN: DEAD-box ATP... 49 2e-10
ref|XP_004139737.1| PREDICTED: LOW QUALITY PROTEIN: DEAD-box ATP... 47 7e-10
ref|XP_002523364.1| dead box ATP-dependent RNA helicase, putativ... 48 3e-09
emb|CAN67649.1| hypothetical protein VITISV_005080 [Vitis vinifera] 44 3e-09
ref|XP_002277120.2| PREDICTED: DEAD-box ATP-dependent RNA helica... 44 3e-09
emb|CBI40505.3| unnamed protein product [Vitis vinifera] 44 3e-09
ref|XP_007051576.1| P-loop containing nucleoside triphosphate hy... 48 3e-08
gb|EXB62200.1| DEAD-box ATP-dependent RNA helicase 31 [Morus not... 46 2e-07
ref|XP_007218917.1| hypothetical protein PRUPE_ppa001456mg [Prun... 40 4e-07
ref|NP_196478.2| DEAD-box ATP-dependent RNA helicase 26 [Arabido... 39 2e-06
gb|AEJ88341.1| putative DEAD-box ATP-dependent RNA helicase [Tam... 48 2e-06
ref|XP_004308314.1| PREDICTED: DEAD-box ATP-dependent RNA helica... 43 6e-06
ref|XP_002871351.1| hypothetical protein ARALYDRAFT_487703 [Arab... 39 8e-06
ref|XP_006399367.1| hypothetical protein EUTSA_v10012704mg [Eutr... 38 8e-06
>ref|XP_002302625.1| DEAD box RNA helicase family protein [Populus trichocarpa]
gi|222844351|gb|EEE81898.1| DEAD box RNA helicase family
protein [Populus trichocarpa]
Length = 758
Score = 49.7 bits (117), Expect(2) = 1e-11
Identities = 24/45 (53%), Positives = 32/45 (71%), Gaps = 2/45 (4%)
Frame = +3
Query: 210 RGEER--KSLVDDEAELSDWIGKIKTDSFRVGLDGERDDDFDMGR 338
RGE R KSL++DEAELSDW+ ++T+S R + E + D DMGR
Sbjct: 82 RGESRPSKSLIEDEAELSDWVSDLRTNSIRGQVTSEDEPDSDMGR 126
Score = 45.4 bits (106), Expect(2) = 1e-11
Identities = 20/42 (47%), Positives = 28/42 (66%)
Frame = +1
Query: 1 LNNSITTSSFSTMKLSTSFQSSRQISVFSKVFPFRLKYLGFS 126
LN S+ + F M + S + R I +FS+VFPF+LKYLGF+
Sbjct: 12 LNPSLPVTRFPLMNVGLSLNTPRPIPIFSRVFPFKLKYLGFA 53
>ref|XP_002320859.2| hypothetical protein POPTR_0014s09330g [Populus trichocarpa]
gi|550323824|gb|EEE99174.2| hypothetical protein
POPTR_0014s09330g [Populus trichocarpa]
Length = 760
Score = 52.4 bits (124), Expect(2) = 1e-11
Identities = 26/45 (57%), Positives = 33/45 (73%), Gaps = 2/45 (4%)
Frame = +3
Query: 210 RGEER--KSLVDDEAELSDWIGKIKTDSFRVGLDGERDDDFDMGR 338
RGE R KSLV+DEAELSDW+ ++T+SFR + E + D DMGR
Sbjct: 82 RGEARTSKSLVEDEAELSDWVSDLRTNSFRGRVTSEDESDSDMGR 126
Score = 42.4 bits (98), Expect(2) = 1e-11
Identities = 20/42 (47%), Positives = 26/42 (61%)
Frame = +1
Query: 1 LNNSITTSSFSTMKLSTSFQSSRQISVFSKVFPFRLKYLGFS 126
LN S + F M + S + R I +FS+VFPF+LKY GFS
Sbjct: 12 LNPSPPVTRFPLMNVGLSINTRRSIPIFSRVFPFKLKYPGFS 53
>ref|XP_004154493.1| PREDICTED: LOW QUALITY PROTEIN: DEAD-box ATP-dependent RNA helicase
31-like [Cucumis sativus]
Length = 842
Score = 48.9 bits (115), Expect(2) = 2e-10
Identities = 25/49 (51%), Positives = 30/49 (61%), Gaps = 6/49 (12%)
Frame = +3
Query: 207 GRGEER------KSLVDDEAELSDWIGKIKTDSFRVGLDGERDDDFDMG 335
GR ER KSLV+DEAELSDW+ +KT SFR + + D D D G
Sbjct: 72 GRNSERGGFGGSKSLVEDEAELSDWVSDLKTSSFRGRITSDEDSDGDRG 120
Score = 42.0 bits (97), Expect(2) = 2e-10
Identities = 20/46 (43%), Positives = 27/46 (58%)
Frame = +1
Query: 1 LNNSITTSSFSTMKLSTSFQSSRQISVFSKVFPFRLKYLGFSRNVR 138
LN+ SF MKL S + SR +FS+VFPF+LKY + + R
Sbjct: 12 LNHPFPLPSFPLMKLQPSIRQSRPFPIFSRVFPFKLKYASMAFSSR 57
>ref|XP_004139737.1| PREDICTED: LOW QUALITY PROTEIN: DEAD-box ATP-dependent RNA helicase
26-like [Cucumis sativus]
Length = 841
Score = 47.0 bits (110), Expect(2) = 7e-10
Identities = 24/47 (51%), Positives = 29/47 (61%), Gaps = 6/47 (12%)
Frame = +3
Query: 207 GRGEER------KSLVDDEAELSDWIGKIKTDSFRVGLDGERDDDFD 329
GR ER KSLV+DEAELSDW+ +KT SFR + + D D D
Sbjct: 72 GRNSERGGFGGSKSLVEDEAELSDWVSDLKTSSFRGRITSDEDSDGD 118
Score = 42.0 bits (97), Expect(2) = 7e-10
Identities = 20/46 (43%), Positives = 27/46 (58%)
Frame = +1
Query: 1 LNNSITTSSFSTMKLSTSFQSSRQISVFSKVFPFRLKYLGFSRNVR 138
LN+ SF MKL S + SR +FS+VFPF+LKY + + R
Sbjct: 12 LNHPFPLPSFPLMKLQPSIRQSRPFPIFSRVFPFKLKYASMAFSSR 57
>ref|XP_002523364.1| dead box ATP-dependent RNA helicase, putative [Ricinus communis]
gi|223537452|gb|EEF39080.1| dead box ATP-dependent RNA
helicase, putative [Ricinus communis]
Length = 751
Score = 47.8 bits (112), Expect(2) = 3e-09
Identities = 22/46 (47%), Positives = 30/46 (65%)
Frame = +3
Query: 201 SNGRGEERKSLVDDEAELSDWIGKIKTDSFRVGLDGERDDDFDMGR 338
S+ + KSL++DEAELSDW+ ++KT S R L E + D DM R
Sbjct: 78 SSSEFRQSKSLIEDEAELSDWVSELKTSSLRGKLTSEDESDSDMTR 123
Score = 39.3 bits (90), Expect(2) = 3e-09
Identities = 18/42 (42%), Positives = 26/42 (61%)
Frame = +1
Query: 1 LNNSITTSSFSTMKLSTSFQSSRQISVFSKVFPFRLKYLGFS 126
L S+ +S MK + +R + +FS++FPFRLKYLG S
Sbjct: 12 LTPSLPVTSLPPMKSFSLINWNRPVPIFSQIFPFRLKYLGLS 53
>emb|CAN67649.1| hypothetical protein VITISV_005080 [Vitis vinifera]
Length = 863
Score = 43.9 bits (102), Expect(2) = 3e-09
Identities = 25/49 (51%), Positives = 32/49 (65%), Gaps = 2/49 (4%)
Frame = +3
Query: 201 SNGRGEER--KSLVDDEAELSDWIGKIKTDSFRVGLDGERDDDFDMGRG 341
S RGE + KSL++DEAELSDW+ +K DSFR + DDD + RG
Sbjct: 78 SGFRGEVKVSKSLMEDEAELSDWVSGLKDDSFRTRFN---DDDSEGERG 123
Score = 42.7 bits (99), Expect(2) = 3e-09
Identities = 19/42 (45%), Positives = 27/42 (64%)
Frame = +1
Query: 1 LNNSITTSSFSTMKLSTSFQSSRQISVFSKVFPFRLKYLGFS 126
LN + S F +M L + Q SR + +F +VFPF+LKYLG +
Sbjct: 12 LNPCLPVSRFQSMNLKPANQYSRTLPIFGRVFPFKLKYLGLA 53
>ref|XP_002277120.2| PREDICTED: DEAD-box ATP-dependent RNA helicase 31-like [Vitis
vinifera]
Length = 751
Score = 43.9 bits (102), Expect(2) = 3e-09
Identities = 25/49 (51%), Positives = 32/49 (65%), Gaps = 2/49 (4%)
Frame = +3
Query: 201 SNGRGEER--KSLVDDEAELSDWIGKIKTDSFRVGLDGERDDDFDMGRG 341
S RGE + KSL++DEAELSDW+ +K DSFR + DDD + RG
Sbjct: 78 SGFRGEVKVSKSLMEDEAELSDWVSGLKDDSFRTRFN---DDDSEGERG 123
Score = 42.7 bits (99), Expect(2) = 3e-09
Identities = 19/42 (45%), Positives = 27/42 (64%)
Frame = +1
Query: 1 LNNSITTSSFSTMKLSTSFQSSRQISVFSKVFPFRLKYLGFS 126
LN + S F +M L + Q SR + +F +VFPF+LKYLG +
Sbjct: 12 LNPCLPVSRFQSMNLKPANQYSRTLPIFGRVFPFKLKYLGLA 53
>emb|CBI40505.3| unnamed protein product [Vitis vinifera]
Length = 732
Score = 43.9 bits (102), Expect(2) = 3e-09
Identities = 25/49 (51%), Positives = 32/49 (65%), Gaps = 2/49 (4%)
Frame = +3
Query: 201 SNGRGEER--KSLVDDEAELSDWIGKIKTDSFRVGLDGERDDDFDMGRG 341
S RGE + KSL++DEAELSDW+ +K DSFR + DDD + RG
Sbjct: 78 SGFRGEVKVSKSLMEDEAELSDWVSGLKDDSFRTRFN---DDDSEGERG 123
Score = 42.7 bits (99), Expect(2) = 3e-09
Identities = 19/42 (45%), Positives = 27/42 (64%)
Frame = +1
Query: 1 LNNSITTSSFSTMKLSTSFQSSRQISVFSKVFPFRLKYLGFS 126
LN + S F +M L + Q SR + +F +VFPF+LKYLG +
Sbjct: 12 LNPCLPVSRFQSMNLKPANQYSRTLPIFGRVFPFKLKYLGLA 53
>ref|XP_007051576.1| P-loop containing nucleoside triphosphate hydrolases superfamily
protein [Theobroma cacao] gi|508703837|gb|EOX95733.1|
P-loop containing nucleoside triphosphate hydrolases
superfamily protein [Theobroma cacao]
Length = 793
Score = 48.1 bits (113), Expect(2) = 3e-08
Identities = 22/38 (57%), Positives = 30/38 (78%)
Frame = +3
Query: 225 KSLVDDEAELSDWIGKIKTDSFRVGLDGERDDDFDMGR 338
KSL++DEAELSDW+G+++TDSFR L E D++ D R
Sbjct: 92 KSLIEDEAELSDWVGELRTDSFRGRLTSE-DEELDADR 128
Score = 35.0 bits (79), Expect(2) = 3e-08
Identities = 15/42 (35%), Positives = 27/42 (64%)
Frame = +1
Query: 1 LNNSITTSSFSTMKLSTSFQSSRQISVFSKVFPFRLKYLGFS 126
L+ S+ + F +M+ S S+ + V ++VFPF+LK++G S
Sbjct: 12 LSPSLPVTRFPSMRPGASIGSNGSMPVLNRVFPFKLKFIGLS 53
>gb|EXB62200.1| DEAD-box ATP-dependent RNA helicase 31 [Morus notabilis]
Length = 749
Score = 45.8 bits (107), Expect(2) = 2e-07
Identities = 27/49 (55%), Positives = 34/49 (69%), Gaps = 9/49 (18%)
Frame = +3
Query: 195 KFSNG-----RGEER--KSLVDDEAELSDWIGKIKTDSFRVG--LDGER 314
+FS G RGE R KSL++DEAELSDW+ ++K+DS R G DGER
Sbjct: 70 EFSRGGGGGERGEVRTAKSLIEDEAELSDWVSELKSDSLRGGGESDGER 118
Score = 35.0 bits (79), Expect(2) = 2e-07
Identities = 19/48 (39%), Positives = 27/48 (56%)
Frame = +1
Query: 1 LNNSITTSSFSTMKLSTSFQSSRQISVFSKVFPFRLKYLGFSRNVRFG 144
LN ++ + MKL S SS +S ++FPF+LKY F N +FG
Sbjct: 12 LNPALPVTCLPPMKLGPSISSSANLS---RIFPFKLKYRCFLPNDQFG 56
>ref|XP_007218917.1| hypothetical protein PRUPE_ppa001456mg [Prunus persica]
gi|462415379|gb|EMJ20116.1| hypothetical protein
PRUPE_ppa001456mg [Prunus persica]
Length = 824
Score = 40.4 bits (93), Expect(2) = 4e-07
Identities = 19/48 (39%), Positives = 31/48 (64%), Gaps = 2/48 (4%)
Frame = +1
Query: 1 LNNSITTSSFSTMKLSTSFQSSRQISVFSKVFPFRLKY--LGFSRNVR 138
L+ S+ + F MK + + SSR + + S+VFP RL+Y LGF R+++
Sbjct: 12 LSTSLPATHFPPMKFAPTLSSSRAVPILSRVFPLRLRYMGLGFRRSLQ 59
Score = 39.3 bits (90), Expect(2) = 4e-07
Identities = 19/43 (44%), Positives = 29/43 (67%)
Frame = +3
Query: 213 GEERKSLVDDEAELSDWIGKIKTDSFRVGLDGERDDDFDMGRG 341
G KSL++DEAELSDW+ ++++DS R R+D+ + RG
Sbjct: 89 GGASKSLIEDEAELSDWVSELRSDSPR-----GREDELEGRRG 126
>ref|NP_196478.2| DEAD-box ATP-dependent RNA helicase 26 [Arabidopsis thaliana]
gi|109893654|sp|Q9FNM7.2|RH26_ARATH RecName:
Full=DEAD-box ATP-dependent RNA helicase 26
gi|332003946|gb|AED91329.1| DEAD-box ATP-dependent RNA
helicase 26 [Arabidopsis thaliana]
Length = 850
Score = 38.5 bits (88), Expect(2) = 2e-06
Identities = 17/47 (36%), Positives = 25/47 (53%)
Frame = +1
Query: 1 LNNSITTSSFSTMKLSTSFQSSRQISVFSKVFPFRLKYLGFSRNVRF 141
+ +S+ + ++M S R + V SK FPFRLKY+G V F
Sbjct: 12 ITHSLPCTRLASMNSGALIYSFRSVPVLSKAFPFRLKYIGLGSRVNF 58
Score = 38.5 bits (88), Expect(2) = 2e-06
Identities = 19/42 (45%), Positives = 26/42 (61%), Gaps = 2/42 (4%)
Frame = +3
Query: 201 SNGRGEER--KSLVDDEAELSDWIGKIKTDSFRVGLDGERDD 320
S GE R KSL++DEAELSDW+ ++T S R + D+
Sbjct: 73 SGAGGEIRASKSLIEDEAELSDWVSDLRTSSLRGKFTSDEDN 114
>gb|AEJ88341.1| putative DEAD-box ATP-dependent RNA helicase [Tamarix hispida]
Length = 783
Score = 48.1 bits (113), Expect(2) = 2e-06
Identities = 21/46 (45%), Positives = 30/46 (65%)
Frame = +3
Query: 204 NGRGEERKSLVDDEAELSDWIGKIKTDSFRVGLDGERDDDFDMGRG 341
+G KSL++DE E+SDWI K++T S R G E ++D + GRG
Sbjct: 81 DGEMRASKSLIEDEEEISDWISKLRTSSNRAGALTEDEEDIEQGRG 126
Score = 28.9 bits (63), Expect(2) = 2e-06
Identities = 17/47 (36%), Positives = 26/47 (55%), Gaps = 2/47 (4%)
Frame = +1
Query: 7 NSITTSSFSTMKLSTSFQSSRQISVFSKVFPFRLKYLGF--SRNVRF 141
+S+ + M L+ + SR S+ FPF+L YLGF SR+ +F
Sbjct: 13 SSLPLTRLPQMSLNPTRYPSRLPFNLSRAFPFKLSYLGFGYSRSSQF 59
>ref|XP_004308314.1| PREDICTED: DEAD-box ATP-dependent RNA helicase 26-like [Fragaria
vesca subsp. vesca]
Length = 824
Score = 42.7 bits (99), Expect(2) = 6e-06
Identities = 22/40 (55%), Positives = 27/40 (67%), Gaps = 6/40 (15%)
Frame = +3
Query: 210 RGEERK------SLVDDEAELSDWIGKIKTDSFRVGLDGE 311
RG ERK SLVDDEAELSDW+ +++TD R G D +
Sbjct: 83 RGYERKAVGGSKSLVDDEAELSDWVSELRTDPTRRGEDSD 122
Score = 32.7 bits (73), Expect(2) = 6e-06
Identities = 16/39 (41%), Positives = 24/39 (61%), Gaps = 1/39 (2%)
Frame = +1
Query: 4 NNSITTSSFSTMKLSTSFQSS-RQISVFSKVFPFRLKYL 117
++S+ S F +MK S +S R + FS+ FP RL+YL
Sbjct: 17 SSSLPISRFLSMKFGPSISASPRPVPAFSRAFPLRLRYL 55
>ref|XP_002871351.1| hypothetical protein ARALYDRAFT_487703 [Arabidopsis lyrata subsp.
lyrata] gi|297317188|gb|EFH47610.1| hypothetical protein
ARALYDRAFT_487703 [Arabidopsis lyrata subsp. lyrata]
Length = 794
Score = 38.5 bits (88), Expect(2) = 8e-06
Identities = 17/47 (36%), Positives = 25/47 (53%)
Frame = +1
Query: 1 LNNSITTSSFSTMKLSTSFQSSRQISVFSKVFPFRLKYLGFSRNVRF 141
+ +S+ + ++M S R + V SK FPFRLKY+G V F
Sbjct: 12 ITHSLPCTRLASMNSGALIYSFRSVPVLSKAFPFRLKYIGLGSRVNF 58
Score = 36.6 bits (83), Expect(2) = 8e-06
Identities = 14/23 (60%), Positives = 19/23 (82%)
Frame = +3
Query: 225 KSLVDDEAELSDWIGKIKTDSFR 293
KSL++DEAELSDW+ ++T S R
Sbjct: 83 KSLIEDEAELSDWVSDLRTSSLR 105
>ref|XP_006399367.1| hypothetical protein EUTSA_v10012704mg [Eutrema salsugineum]
gi|557100457|gb|ESQ40820.1| hypothetical protein
EUTSA_v10012704mg [Eutrema salsugineum]
Length = 821
Score = 38.1 bits (87), Expect(2) = 8e-06
Identities = 19/42 (45%), Positives = 25/42 (59%), Gaps = 2/42 (4%)
Frame = +3
Query: 201 SNGRGEER--KSLVDDEAELSDWIGKIKTDSFRVGLDGERDD 320
S GE R KSL++DEAELSDW+ ++ S R + DD
Sbjct: 100 SRNGGEIRASKSLIEDEAELSDWVSDLRPSSLRGKFTSDEDD 141
Score = 37.0 bits (84), Expect(2) = 8e-06
Identities = 18/47 (38%), Positives = 24/47 (51%)
Frame = +1
Query: 1 LNNSITTSSFSTMKLSTSFQSSRQISVFSKVFPFRLKYLGFSRNVRF 141
+ +SI + ++M S R + V SK FP RLKYLG V F
Sbjct: 39 ITHSIPCNRLASMNSVALIYSFRSVPVLSKAFPLRLKYLGLGSRVNF 85