BLASTX nr result

ID: Akebia27_contig00016078 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Akebia27_contig00016078
         (842 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003551440.1| PREDICTED: cleavage and polyadenylation spec...    67   1e-08
ref|XP_003551437.1| PREDICTED: cleavage and polyadenylation spec...    67   1e-08
ref|XP_007146637.1| hypothetical protein PHAVU_006G057000g [Phas...    61   6e-07
ref|XP_007146640.1| hypothetical protein PHAVU_006G057100g [Phas...    60   1e-06
ref|XP_007146638.1| hypothetical protein PHAVU_006G057100g [Phas...    60   1e-06

>ref|XP_003551440.1| PREDICTED: cleavage and polyadenylation specificity factor subunit
           CG7185-like [Glycine max]
          Length = 696

 Score = 66.6 bits (161), Expect = 1e-08
 Identities = 55/179 (30%), Positives = 74/179 (41%), Gaps = 14/179 (7%)
 Frame = +2

Query: 248 MDEGDAVFGDGGD------RNEAISAVAXXXXXXXXXXXXXXXXXXXXXXGEGFLQSLRK 409
           MDEG+  +G+ GD      RNEAISAVA                      GEGFLQSLRK
Sbjct: 1   MDEGEGGYGESGDPMDQFHRNEAISAVADEGFLGEEEDDDYEDLYNDVNVGEGFLQSLRK 60

Query: 410 NEDL-----ELSEKKIEP---VTESTGFSIPXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 565
           N+D      E+ EKK  P   V ++ G SIP                             
Sbjct: 61  NDDSGFRNDEVEEKKPPPPPPVPDAAGVSIPGVGGGGGSGVVESRVSGRVDG-------- 112

Query: 566 YKDLDFRGNEMALKSSXXXXXXXXXIRVELGQSSAKMGDVDEKIVQTSVPSQGIVQQSH 742
           +++  +RGNE+  K           IR+ELG  S  + +++++        QGI QQ H
Sbjct: 113 FQNQGYRGNEVGAKGG---------IRIELGNQSGNLSEIEDQGGNDGAAMQGIGQQPH 162


>ref|XP_003551437.1| PREDICTED: cleavage and polyadenylation specificity factor subunit
           CG7185-like isoform X1 [Glycine max]
           gi|571543924|ref|XP_006602132.1| PREDICTED: cleavage and
           polyadenylation specificity factor subunit CG7185-like
           isoform X2 [Glycine max]
           gi|571543928|ref|XP_006602133.1| PREDICTED: cleavage and
           polyadenylation specificity factor subunit CG7185-like
           isoform X3 [Glycine max]
          Length = 698

 Score = 66.6 bits (161), Expect = 1e-08
 Identities = 55/179 (30%), Positives = 74/179 (41%), Gaps = 14/179 (7%)
 Frame = +2

Query: 248 MDEGDAVFGDGGD------RNEAISAVAXXXXXXXXXXXXXXXXXXXXXXGEGFLQSLRK 409
           MDEG+  +G+ GD      RNEAISAVA                      GEGFLQSLRK
Sbjct: 1   MDEGEGGYGESGDPMDQFHRNEAISAVADEGFLGEEEDDDYEDLYNDVNVGEGFLQSLRK 60

Query: 410 NEDL-----ELSEKKIEP---VTESTGFSIPXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 565
           N+D      E+ EKK  P   V ++ G SIP                             
Sbjct: 61  NDDSGFRNDEVEEKKPPPPPPVPDAAGVSIPGVGGGGGSGVVESRVSGRVDG-------- 112

Query: 566 YKDLDFRGNEMALKSSXXXXXXXXXIRVELGQSSAKMGDVDEKIVQTSVPSQGIVQQSH 742
           +++  +RGNE+  K           IR+ELG  S  + +++++        QGI QQ H
Sbjct: 113 FQNQGYRGNEVGAKGG---------IRIELGNQSGNLSEIEDQGGNDGAAMQGIGQQPH 162


>ref|XP_007146637.1| hypothetical protein PHAVU_006G057000g [Phaseolus vulgaris]
           gi|561019860|gb|ESW18631.1| hypothetical protein
           PHAVU_006G057000g [Phaseolus vulgaris]
          Length = 687

 Score = 60.8 bits (146), Expect = 6e-07
 Identities = 55/181 (30%), Positives = 74/181 (40%), Gaps = 16/181 (8%)
 Frame = +2

Query: 248 MDEGDAVFGDGGD------RNEAISAVAXXXXXXXXXXXXXXXXXXXXXXGEGFLQSLRK 409
           MDEG+  +G+  D      RNEAISAVA                      GEGFLQSLRK
Sbjct: 1   MDEGEGGYGESADPMDQFHRNEAISAVADDGFLAEEDDDYEDLYNDVNV-GEGFLQSLRK 59

Query: 410 NEDL-------ELSEKK---IEPVTESTGFSIPXXXXXXXXXXXXXXXXXXXXXXXXXXX 559
           N+D        ++ +KK   + PV ++ G SIP                           
Sbjct: 60  NDDSAVVSRNDDVEDKKPSPLPPVPDAAGVSIP--GVGGGGEGVGVGGSGAVESRVSGRV 117

Query: 560 XXYKDLDFRGNEMALKSSXXXXXXXXXIRVELGQSSAKMGDVDEKIVQTSVPSQGIVQQS 739
             +++  FRGN++  K           IRVELG  S K  +++E+        QGI QQ 
Sbjct: 118 DGFQNQGFRGNDIGAKGG---------IRVELGHQSGKSSEIEEQGGNDGAAVQGIGQQP 168

Query: 740 H 742
           H
Sbjct: 169 H 169


>ref|XP_007146640.1| hypothetical protein PHAVU_006G057100g [Phaseolus vulgaris]
           gi|561019863|gb|ESW18634.1| hypothetical protein
           PHAVU_006G057100g [Phaseolus vulgaris]
          Length = 691

 Score = 60.1 bits (144), Expect = 1e-06
 Identities = 55/179 (30%), Positives = 69/179 (38%), Gaps = 14/179 (7%)
 Frame = +2

Query: 248 MDEGDAVFGDGGD------RNEAISAVAXXXXXXXXXXXXXXXXXXXXXXGEGFLQSLRK 409
           MDEGD  +G+ GD      RNEAISAVA                      GEGFLQSLRK
Sbjct: 1   MDEGDGGYGESGDPMDQFHRNEAISAVADDGFMAEEDDDYEDLYNDVNV-GEGFLQSLRK 59

Query: 410 NEDLELSEKKIE--------PVTESTGFSIPXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 565
           N++       +E        P  ++ G SIP                             
Sbjct: 60  NDEPAFRNDGVEDQKPPPPPPAPDAAGVSIP--TAGGGGEGVGGGESEVLESRVSGRVDG 117

Query: 566 YKDLDFRGNEMALKSSXXXXXXXXXIRVELGQSSAKMGDVDEKIVQTSVPSQGIVQQSH 742
           +++  FRGNE+A K           IRVELG  S K   ++E+         G VQQ H
Sbjct: 118 FQNQGFRGNEVAAKGG---------IRVELGHQSMKSSGIEEQGGNDGAAVPGNVQQPH 167


>ref|XP_007146638.1| hypothetical protein PHAVU_006G057100g [Phaseolus vulgaris]
           gi|593692194|ref|XP_007146639.1| hypothetical protein
           PHAVU_006G057100g [Phaseolus vulgaris]
           gi|561019861|gb|ESW18632.1| hypothetical protein
           PHAVU_006G057100g [Phaseolus vulgaris]
           gi|561019862|gb|ESW18633.1| hypothetical protein
           PHAVU_006G057100g [Phaseolus vulgaris]
          Length = 523

 Score = 60.1 bits (144), Expect = 1e-06
 Identities = 55/179 (30%), Positives = 69/179 (38%), Gaps = 14/179 (7%)
 Frame = +2

Query: 248 MDEGDAVFGDGGD------RNEAISAVAXXXXXXXXXXXXXXXXXXXXXXGEGFLQSLRK 409
           MDEGD  +G+ GD      RNEAISAVA                      GEGFLQSLRK
Sbjct: 1   MDEGDGGYGESGDPMDQFHRNEAISAVADDGFMAEEDDDYEDLYNDVNV-GEGFLQSLRK 59

Query: 410 NEDLELSEKKIE--------PVTESTGFSIPXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 565
           N++       +E        P  ++ G SIP                             
Sbjct: 60  NDEPAFRNDGVEDQKPPPPPPAPDAAGVSIP--TAGGGGEGVGGGESEVLESRVSGRVDG 117

Query: 566 YKDLDFRGNEMALKSSXXXXXXXXXIRVELGQSSAKMGDVDEKIVQTSVPSQGIVQQSH 742
           +++  FRGNE+A K           IRVELG  S K   ++E+         G VQQ H
Sbjct: 118 FQNQGFRGNEVAAKGG---------IRVELGHQSMKSSGIEEQGGNDGAAVPGNVQQPH 167


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