BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Akebia27_contig00015798
         (4077 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002277555.1| PREDICTED: DNA-directed RNA polymerase I sub...  1730   0.0  
emb|CBI29879.3| unnamed protein product [Vitis vinifera]             1712   0.0  
ref|XP_007028854.1| Nuclear RNA polymerase A1, putative isoform ...  1579   0.0  
ref|XP_007028853.1| Nuclear RNA polymerase A1, putative isoform ...  1579   0.0  
ref|XP_002526734.1| DNA-directed RNA polymerase I largest subuni...  1574   0.0  
ref|XP_006493898.1| PREDICTED: DNA-directed RNA polymerase I sub...  1569   0.0  
ref|XP_006421454.1| hypothetical protein CICLE_v10004132mg [Citr...  1559   0.0  
ref|XP_004136744.1| PREDICTED: DNA-directed RNA polymerase I sub...  1552   0.0  
ref|XP_004165748.1| PREDICTED: LOW QUALITY PROTEIN: DNA-directed...  1545   0.0  
ref|XP_006588921.1| PREDICTED: DNA-directed RNA polymerase I sub...  1539   0.0  
ref|XP_007145632.1| hypothetical protein PHAVU_007G255400g [Phas...  1506   0.0  
ref|XP_006351332.1| PREDICTED: DNA-directed RNA polymerase I sub...  1483   0.0  
ref|XP_004513648.1| PREDICTED: DNA-directed RNA polymerase I sub...  1479   0.0  
ref|XP_004513652.1| PREDICTED: DNA-directed RNA polymerase I sub...  1477   0.0  
ref|XP_004249758.1| PREDICTED: DNA-directed RNA polymerase I sub...  1475   0.0  
emb|CAN70028.1| hypothetical protein VITISV_029145 [Vitis vinifera]  1459   0.0  
ref|XP_003607990.1| DNA-directed RNA polymerase subunit beta [Me...  1446   0.0  
ref|XP_006290488.1| hypothetical protein CARUB_v10016563mg [Caps...  1434   0.0  
ref|XP_006402858.1| hypothetical protein EUTSA_v10005738mg [Eutr...  1426   0.0  
gb|EYU39881.1| hypothetical protein MIMGU_mgv1a000122mg [Mimulus...  1423   0.0  

>ref|XP_002277555.1| PREDICTED: DNA-directed RNA polymerase I subunit RPA1-like [Vitis
            vinifera]
          Length = 1740

 Score = 1730 bits (4480), Expect = 0.0
 Identities = 889/1376 (64%), Positives = 1057/1376 (76%), Gaps = 36/1376 (2%)
 Frame = +3

Query: 57   VTKMAYTTEGATESVEAVGFSFLTNEEVRTLSFKKITNPILLDNLGRPAPDGLYDPAMGP 236
            VT     T G TE VEAV FSF T+EEVR  SFKKIT+P++LD++ RP P GLYDPA+G 
Sbjct: 47   VTAPVTATSGTTEFVEAVKFSFFTDEEVRKYSFKKITSPLMLDSVQRPVPGGLYDPALGS 106

Query: 237  LEDRTLCKSCGQRSFQCPGHCGHIDLVSPIYNPLLFRILFNLLQRTCFFCYHFRVNREQV 416
            +++ T C+SCGQRSF CPGHCGHIDLVS +YNPLLF +L NLLQ+TCFFC+HF+ +   V
Sbjct: 107  IDENTPCQSCGQRSFYCPGHCGHIDLVSSVYNPLLFNLLHNLLQKTCFFCHHFKTSSSLV 166

Query: 417  KKCALQLELIIKGDIVGAKXXXXXXXXXXXXXXXXXRVHVK---GLPRQVPNYNSKNLKQ 587
            +K   QLELI KGD+VGAK                   HV     +     +  S +LKQ
Sbjct: 167  QKYVSQLELISKGDVVGAKNLDSISPSESSYPEDSDGSHVSCSSTVNSSARDNCSVHLKQ 226

Query: 588  HSWTSLQYSEAMSLLDELMTGQKTECKRCGAKNPKITCPNFGWFHV-NMPNKYTRANIIK 764
              WTSLQ  EAMS++D  +  +  +CK C AK+P++T P FGWFH+  + +  TRAN+I+
Sbjct: 227  QEWTSLQCIEAMSVMDNFLKLKHRDCKNCKAKSPQVTKPTFGWFHMAGLSDAQTRANVIR 286

Query: 765  GSKLNKLSMGKAKRNSTGEEENANDSSAMGD-VDSTDAESSGVVYDGTPDSAQKV---KG 932
            GSKL +     A+  S+ E EN ND    GD VD+ +  SS    DG  D+  K    KG
Sbjct: 287  GSKLERPLSRVAEEKSSSEVENVNDMFPWGDGVDTDETHSSIAPTDGIQDTVTKRLERKG 346

Query: 933  GYLYPEFLKQKEFFSGPLLPSEVKNHMKLLWENETQLCSLICDIQQERLSISGMKGNYSM 1112
                 EF+KQK FFSGPLLPSEV++ M+ LWENE +LCS I DI QERL  SG K  YSM
Sbjct: 347  AQAPIEFIKQKSFFSGPLLPSEVRDIMERLWENEAELCSFISDILQERLGASGNKAGYSM 406

Query: 1113 FFIEALLVPPIKFRPPSKGGDSVMEHPQTVLLNKVMYSNISLCNEHMNSSERSKIVPRWF 1292
            FF+E +LVPPIKFRPPSKG  SVMEHPQTVLL KV+ +NI+L N H N+SERSKI+ RW 
Sbjct: 407  FFLETILVPPIKFRPPSKGQISVMEHPQTVLLGKVLQANIALGNAHANNSERSKIISRWM 466

Query: 1293 DLQQSINVLFGNSKTAGL-RENMATGICQLLEKKEGIFRQKMMGKRVNYACRSVISPDPY 1469
            DLQQSINVLF     AG  + +  +GICQLLEKKEG+FRQKMMGKRVN+ACRSVISPDPY
Sbjct: 467  DLQQSINVLFDGKTAAGQGQRDTGSGICQLLEKKEGVFRQKMMGKRVNFACRSVISPDPY 526

Query: 1470 LAVNEIGIPPYFALRLTYPERVTPWNVNKLRDAIINGAEVHPGATHYVDKLATVKLPPNR 1649
            LAVNEIGIPPYFALRLTYPE+VTPWNV KLRDAIING E+HPGATHYVDKL+TVKL  N+
Sbjct: 527  LAVNEIGIPPYFALRLTYPEKVTPWNVVKLRDAIINGPEIHPGATHYVDKLSTVKLAVNK 586

Query: 1650 KIRTSISRKLHSSRGVVAQPGKNLEHELEGKVVYRHLQDGDIVLVNRQPTLHKPSIMAHV 1829
            K+R SISRKL SSRGVVAQPG++ ++E EGK+VYRHLQDGDIVLVNRQPTLHKPSIMAHV
Sbjct: 587  KMRISISRKLPSSRGVVAQPGRSSDNEFEGKIVYRHLQDGDIVLVNRQPTLHKPSIMAHV 646

Query: 1830 VRVLSGEKTLRMHYANCSTYNADFDGDEMNVHFPQDEISRAEAFNIVNANNQYILPTSGE 2009
            VRVL GEKTLRMHYANCSTYNADFDGDEMNVHFPQDEISRAEA+NIVNANNQYI+P+ G+
Sbjct: 647  VRVLKGEKTLRMHYANCSTYNADFDGDEMNVHFPQDEISRAEAYNIVNANNQYIVPSRGD 706

Query: 2010 PTRGLIQDHIVSAVLLTKKDTFLTWEEYNHLLYSSGVSAAARDFFSSKPGQKVSVINSEA 2189
            P RGLIQDHIVSAVLLTKKDTFLT E+YN LLYSSG+S+ +  F   KPG+KVSV++SE 
Sbjct: 707  PIRGLIQDHIVSAVLLTKKDTFLTREQYNQLLYSSGLSSGSGSFIG-KPGKKVSVLDSED 765

Query: 2190 EIEPILPAILKPVPMWTGKQVITSLLNHISRTRGFEPLTVEKSGKIKKEYFGRKSDEAN- 2366
            E++P+LPAI KP P+W+GKQVIT++LNHI  TRG +P T EK GKI +EYFG + DE   
Sbjct: 766  EMQPLLPAIWKPEPLWSGKQVITAVLNHI--TRGRKPFTTEKDGKIPREYFGSEIDEKKS 823

Query: 2367 ------------------------LLIQKNELVHGVIDKAQFGEYGLVHTVQEFYGSDTA 2474
                                    LLI KNELV GVIDKAQF +YGLVH VQE YGS+TA
Sbjct: 824  GKGKDPGSDRRKEKRIEKKHGEYKLLIHKNELVRGVIDKAQFDKYGLVHMVQELYGSNTA 883

Query: 2475 GILLSVLSRLFTVFLQMHGFTCGVDDLLIVQELDMERMKKLQRSDKIGEEQHAKFIGAKE 2654
            GILLSVLSRLFTVFLQMHGFTCGVDDLLI    D+ R  +L +S+ IGE  H KFIG+  
Sbjct: 884  GILLSVLSRLFTVFLQMHGFTCGVDDLLISPNYDIARKIELDKSENIGELVHCKFIGSNH 943

Query: 2655 GDIDQMELQVEIEKAIRIKGESAITQLDRMMSSELNDLTSVVNSELFPKGLLKPFPKNCL 2834
            G ID ++LQVE+EK I   GE+AIT+LDRMM +ELN+LTS VN +L  KGL+KPFPKNCL
Sbjct: 944  GKIDPVKLQVEVEKIILSNGEAAITRLDRMMKNELNELTSKVNKDLLLKGLVKPFPKNCL 1003

Query: 2835 SLMTTSGAKGSLVNFTQISSLLGQQQLEGKRVPRMVSGKTLPCFPPWDPASRAGGFITDR 3014
            SLMTT+GAKGS VNF+QISS LGQQ LEGKRVPRMVSGKTLPCFPPWD A+RAGGFI+DR
Sbjct: 1004 SLMTTTGAKGSTVNFSQISSFLGQQDLEGKRVPRMVSGKTLPCFPPWDCAARAGGFISDR 1063

Query: 3015 FLTGLRPQEYYFHCMAGREGLVDTAVKTSRSGYLQRCLVKSLECLKVCYDHTVRDADGSV 3194
            FLTGL PQEYYFHCMAGREGLVDTAVKTSRSGYLQRCL+K+LECLKVCYD+TVRD+DGS+
Sbjct: 1064 FLTGLHPQEYYFHCMAGREGLVDTAVKTSRSGYLQRCLIKNLECLKVCYDYTVRDSDGSI 1123

Query: 3195 VQFCYGEDGVDVHKTSFVTKFDTLAANQRVL-ERLGDHFEDAQMKSDDYIKELPEALEQK 3371
            VQF YG+DGVDVH+TSF+T+F+ LA N+ V+ E+ G        K + YI++LP+ L +K
Sbjct: 1124 VQFNYGDDGVDVHQTSFITEFEALAVNEEVVCEKFGQ-----DGKFNGYIQKLPKELRKK 1178

Query: 3372 TKDFLSNLTKQQRHSLHLRKRKDFXXXXXXXXXXXXAQPGEPVGVIAAQSVGQPSTQMTL 3551
            TK F+    ++++   +++K+KDF            AQPGEPVGV+AAQSVG+PSTQMTL
Sbjct: 1179 TKKFIEGFMEERQDFDNMKKQKDFVNLVKQKYISSLAQPGEPVGVLAAQSVGEPSTQMTL 1238

Query: 3552 NTFHHAGLGAMNVTLGIPRLQEILMRASETIQTPVMTCPLLMGKTWDDAKRLAATLKKVS 3731
            NTFH AG G +NVTLGIPRLQEILM A+  I+TP+MTCPL MG++ DDA+RLAA LKKV+
Sbjct: 1239 NTFHLAGRGEVNVTLGIPRLQEILMTAANDIKTPIMTCPLQMGRSKDDAERLAAKLKKVT 1298

Query: 3732 VADIVESIEVCVVPFSVKKHQVSSIYKLKMKLYRPELYPPFSDITLEDCLKTMEVLFVGE 3911
            VADI ES+EV +VPF+V+ HQ  SIYKLKMKLY P LYPP + I+LEDC +T+E +FV E
Sbjct: 1299 VADITESMEVSIVPFTVQDHQTCSIYKLKMKLYEPALYPPHTGISLEDCEETLEAVFVRE 1358

Query: 3912 LEEEIQAHLIMLSKISGIKNIVLSAQSGSSKDIDEGDTG-SKSQQVGEENDENAGD 4076
            LE+ IQ HL++LSKISGIKN +  ++S +SK+ DE  +G   +   G+E+D+   D
Sbjct: 1359 LEDAIQNHLLLLSKISGIKNFLPDSRSMASKETDEDASGDGLAGGNGDEDDDGEDD 1414


>emb|CBI29879.3| unnamed protein product [Vitis vinifera]
          Length = 1669

 Score = 1712 bits (4433), Expect = 0.0
 Identities = 880/1372 (64%), Positives = 1048/1372 (76%), Gaps = 35/1372 (2%)
 Frame = +3

Query: 66   MAYTTEGATESVEAVGFSFLTNEEVRTLSFKKITNPILLDNLGRPAPDGLYDPAMGPLED 245
            MA+  EG TE VEAV FSF T+EEVR  SFKKIT+P++LD++ RP P GLYDPA+G +++
Sbjct: 1    MAHVIEGTTEFVEAVKFSFFTDEEVRKYSFKKITSPLMLDSVQRPVPGGLYDPALGSIDE 60

Query: 246  RTLCKSCGQRSFQCPGHCGHIDLVSPIYNPLLFRILFNLLQRTCFFCYHFRVNREQVKKC 425
             T C+SCGQRSF CPGHCGHIDLVS +YNPLLF +L NLLQ+TCFFC+HF+ +   V+K 
Sbjct: 61   NTPCQSCGQRSFYCPGHCGHIDLVSSVYNPLLFNLLHNLLQKTCFFCHHFKTSSSLVQKY 120

Query: 426  ALQLELIIKGDIVGAKXXXXXXXXXXXXXXXXXRVHVK---GLPRQVPNYNSKNLKQHSW 596
              QLELI KGD+VGAK                   HV     +     +  S +LKQ  W
Sbjct: 121  VSQLELISKGDVVGAKNLDSISPSESSYPEDSDGSHVSCSSTVNSSARDNCSVHLKQQEW 180

Query: 597  TSLQYSEAMSLLDELMTGQKTECKRCGAKNPKITCPNFGWFHV-NMPNKYTRANIIKGSK 773
            TSLQ  EAMS++D  +  +  +CK C AK+P++T P FGWFH+  + +  TRAN+I+GSK
Sbjct: 181  TSLQCIEAMSVMDNFLKLKHRDCKNCKAKSPQVTKPTFGWFHMAGLSDAQTRANVIRGSK 240

Query: 774  LNKLSMGKAKRNSTGEEENANDSSAMGDVDSTDAESSGVVYDGTPDSAQKV---KGGYLY 944
            L +                      +  VD+ +  SS    DG  D+  K    KG    
Sbjct: 241  LER---------------------PLNGVDTDETHSSIAPTDGIQDTVTKRLERKGAQAP 279

Query: 945  PEFLKQKEFFSGPLLPSEVKNHMKLLWENETQLCSLICDIQQERLSISGMKGNYSMFFIE 1124
             EF+KQK FFSGPLLPSEV++ M+ LWENE +LCS I DI QERL  SG K  YSMFF+E
Sbjct: 280  IEFIKQKSFFSGPLLPSEVRDIMERLWENEAELCSFISDILQERLGASGNKAGYSMFFLE 339

Query: 1125 ALLVPPIKFRPPSKGGDSVMEHPQTVLLNKVMYSNISLCNEHMNSSERSKIVPRWFDLQQ 1304
             +LVPPIKFRPPSKG  SVMEHPQTVLL KV+ +NI+L N H N+SERSKI+ RW DLQQ
Sbjct: 340  TILVPPIKFRPPSKGQISVMEHPQTVLLGKVLQANIALGNAHANNSERSKIISRWMDLQQ 399

Query: 1305 SINVLFGNSKTAGL-RENMATGICQLLEKKEGIFRQKMMGKRVNYACRSVISPDPYLAVN 1481
            SINVLF     AG  + +  +GICQLLEKKEG+FRQKMMGKRVN+ACRSVISPDPYLAVN
Sbjct: 400  SINVLFDGKTAAGQGQRDTGSGICQLLEKKEGVFRQKMMGKRVNFACRSVISPDPYLAVN 459

Query: 1482 EIGIPPYFALRLTYPERVTPWNVNKLRDAIINGAEVHPGATHYVDKLATVKLPPNRKIRT 1661
            EIGIPPYFALRLTYPE+VTPWNV KLRDAIING E+HPGATHYVDKL+TVKL  N+K+R 
Sbjct: 460  EIGIPPYFALRLTYPEKVTPWNVVKLRDAIINGPEIHPGATHYVDKLSTVKLAVNKKMRI 519

Query: 1662 SISRKLHSSRGVVAQPGKNLEHELEGKVVYRHLQDGDIVLVNRQPTLHKPSIMAHVVRVL 1841
            SISRKL SSRGVVAQPG++ ++E EGK+VYRHLQDGDIVLVNRQPTLHKPSIMAHVVRVL
Sbjct: 520  SISRKLPSSRGVVAQPGRSSDNEFEGKIVYRHLQDGDIVLVNRQPTLHKPSIMAHVVRVL 579

Query: 1842 SGEKTLRMHYANCSTYNADFDGDEMNVHFPQDEISRAEAFNIVNANNQYILPTSGEPTRG 2021
             GEKTLRMHYANCSTYNADFDGDEMNVHFPQDEISRAEA+NIVNANNQYI+P+ G+P RG
Sbjct: 580  KGEKTLRMHYANCSTYNADFDGDEMNVHFPQDEISRAEAYNIVNANNQYIVPSRGDPIRG 639

Query: 2022 LIQDHIVSAVLLTKKDTFLTWEEYNHLLYSSGVSAAARDFFSSKPGQKVSVINSEAEIEP 2201
            LIQDHIVSAVLLTKKDTFLT E+YN LLYSSG+S+ +  F   KPG+KVSV++SE E++P
Sbjct: 640  LIQDHIVSAVLLTKKDTFLTREQYNQLLYSSGLSSGSGSFIG-KPGKKVSVLDSEDEMQP 698

Query: 2202 ILPAILKPVPMWTGKQVITSLLNHISRTRGFEPLTVEKSGKIKKEYFGRKSDEAN----- 2366
            +LPAI KP P+W+GKQVIT++LNHI  TRG +P T EK GKI +EYFG + DE       
Sbjct: 699  LLPAIWKPEPLWSGKQVITAVLNHI--TRGRKPFTTEKDGKIPREYFGSEIDEKKSGKGK 756

Query: 2367 --------------------LLIQKNELVHGVIDKAQFGEYGLVHTVQEFYGSDTAGILL 2486
                                LLI KNELV GVIDKAQF +YGLVH VQE YGS+TAGILL
Sbjct: 757  DPGSDRRKEKRIEKKHGEYKLLIHKNELVRGVIDKAQFDKYGLVHMVQELYGSNTAGILL 816

Query: 2487 SVLSRLFTVFLQMHGFTCGVDDLLIVQELDMERMKKLQRSDKIGEEQHAKFIGAKEGDID 2666
            SVLSRLFTVFLQMHGFTCGVDDLLI    D+ R  +L +S+ IGE  H KFIG+  G ID
Sbjct: 817  SVLSRLFTVFLQMHGFTCGVDDLLISPNYDIARKIELDKSENIGELVHCKFIGSNHGKID 876

Query: 2667 QMELQVEIEKAIRIKGESAITQLDRMMSSELNDLTSVVNSELFPKGLLKPFPKNCLSLMT 2846
             ++LQVE+EK I   GE+AIT+LDRMM +ELN+LTS VN +L  KGL+KPFPKNCLSLMT
Sbjct: 877  PVKLQVEVEKIILSNGEAAITRLDRMMKNELNELTSKVNKDLLLKGLVKPFPKNCLSLMT 936

Query: 2847 TSGAKGSLVNFTQISSLLGQQQLEGKRVPRMVSGKTLPCFPPWDPASRAGGFITDRFLTG 3026
            T+GAKGS VNF+QISS LGQQ LEGKRVPRMVSGKTLPCFPPWD A+RAGGFI+DRFLTG
Sbjct: 937  TTGAKGSTVNFSQISSFLGQQDLEGKRVPRMVSGKTLPCFPPWDCAARAGGFISDRFLTG 996

Query: 3027 LRPQEYYFHCMAGREGLVDTAVKTSRSGYLQRCLVKSLECLKVCYDHTVRDADGSVVQFC 3206
            L PQEYYFHCMAGREGLVDTAVKTSRSGYLQRCL+K+LECLKVCYD+TVRD+DGS+VQF 
Sbjct: 997  LHPQEYYFHCMAGREGLVDTAVKTSRSGYLQRCLIKNLECLKVCYDYTVRDSDGSIVQFN 1056

Query: 3207 YGEDGVDVHKTSFVTKFDTLAANQRVL-ERLGDHFEDAQMKSDDYIKELPEALEQKTKDF 3383
            YG+DGVDVH+TSF+T+F+ LA N+ V+ E+ G        K + YI++LP+ L +KTK F
Sbjct: 1057 YGDDGVDVHQTSFITEFEALAVNEEVVCEKFGQ-----DGKFNGYIQKLPKELRKKTKKF 1111

Query: 3384 LSNLTKQQRHSLHLRKRKDFXXXXXXXXXXXXAQPGEPVGVIAAQSVGQPSTQMTLNTFH 3563
            +    ++++   +++K+KDF            AQPGEPVGV+AAQSVG+PSTQMTLNTFH
Sbjct: 1112 IEGFMEERQDFDNMKKQKDFVNLVKQKYISSLAQPGEPVGVLAAQSVGEPSTQMTLNTFH 1171

Query: 3564 HAGLGAMNVTLGIPRLQEILMRASETIQTPVMTCPLLMGKTWDDAKRLAATLKKVSVADI 3743
             AG G +NVTLGIPRLQEILM A+  I+TP+MTCPL MG++ DDA+RLAA LKKV+VADI
Sbjct: 1172 LAGRGEVNVTLGIPRLQEILMTAANDIKTPIMTCPLQMGRSKDDAERLAAKLKKVTVADI 1231

Query: 3744 VESIEVCVVPFSVKKHQVSSIYKLKMKLYRPELYPPFSDITLEDCLKTMEVLFVGELEEE 3923
             ES+EV +VPF+V+ HQ  SIYKLKMKLY P LYPP + I+LEDC +T+E +FV ELE+ 
Sbjct: 1232 TESMEVSIVPFTVQDHQTCSIYKLKMKLYEPALYPPHTGISLEDCEETLEAVFVRELEDA 1291

Query: 3924 IQAHLIMLSKISGIKNIVLSAQSGSSKDIDEGDTG-SKSQQVGEENDENAGD 4076
            IQ HL++LSKISGIKN +  ++S +SK+ DE  +G   +   G+E+D+   D
Sbjct: 1292 IQNHLLLLSKISGIKNFLPDSRSMASKETDEDASGDGLAGGNGDEDDDGEDD 1343


>ref|XP_007028854.1| Nuclear RNA polymerase A1, putative isoform 2 [Theobroma cacao]
            gi|508717459|gb|EOY09356.1| Nuclear RNA polymerase A1,
            putative isoform 2 [Theobroma cacao]
          Length = 1689

 Score = 1579 bits (4089), Expect = 0.0
 Identities = 834/1374 (60%), Positives = 1009/1374 (73%), Gaps = 37/1374 (2%)
 Frame = +3

Query: 66   MAYTTEGATESVEAVGFSFLTNEEVRTLSFKKITNPILLDNLGRPAPDGLYDPAMGPLED 245
            MA  TEGAT+SVEAV F+F+T EEVR  SF K+TN  LLD + RP P GLYD  +GPLED
Sbjct: 1    MAQITEGATDSVEAVRFNFMTTEEVRKHSFLKVTNANLLDLMDRPMPGGLYDAVLGPLED 60

Query: 246  RTLCKSCGQRSFQCPGHCGHIDLVSPIYNPLLFRILFNLLQRTCFFCYHFRVNREQVKKC 425
            RT CKSCG     CPGHCGHIDLVSPIYNPLLF  L  LLQR CFFCYHFR  + +V++C
Sbjct: 61   RTPCKSCGLLKLHCPGHCGHIDLVSPIYNPLLFNFLHTLLQRICFFCYHFRAEKTEVERC 120

Query: 426  ALQLELIIKGDIVGAKXXXXXXXXXXXXXXXXXRVHVKGLPRQVPNYNSKNLKQHSWTSL 605
              QL+LI  GDIVGAK                      G       +NS+ +K   WTSL
Sbjct: 121  VSQLKLIGNGDIVGAKRLDSDSADASSYSDYNEGSQESG----SIVHNSEAVKPKEWTSL 176

Query: 606  QYSEAMSLLDELMTGQKTECKRCGAKNPKITCPNFGWFHVN-MPNKYTRANIIKGSKLNK 782
            Q  EAMS+L+  +  +  +CK C AKNP IT P FGW H+N M     R N+I+G K+  
Sbjct: 177  QLMEAMSVLNNFLKLKYNKCKNCDAKNPNITKPVFGWLHMNGMLGAQMRENVIRGCKMVD 236

Query: 783  LSMGKAKRNSTGEEENANDSSAMGDVDSTDAESSGVVYDGTPDSAQKV--KGGYLYPEFL 956
                +A    +G E+  + SS+   VD  + ++S + + G+  +  K   K   +  EF+
Sbjct: 237  TFSDEA---GSGLEDADDVSSSGNGVDIAEMDTSEIGFTGSEGNGAKARKKKAQVPLEFM 293

Query: 957  KQKEFFSGPLLPSEVKNHMKLLWENETQLCSLICDIQQERLSISGMKGNYSMFFIEALLV 1136
            KQK  FSGPLLPSEVK   KLLWENE +LCS+I DIQQ+     G K  YSMFF+E +LV
Sbjct: 294  KQKNLFSGPLLPSEVKKITKLLWENEVELCSIISDIQQQGF---GKKVGYSMFFLETILV 350

Query: 1137 PPIKFRPPSKGGDSVMEHPQTVLLNKVMYSNISLCNEHMNSSERSKIVPR-WFDLQQSIN 1313
            PPIKFR P+KGGDSVMEHPQTVLL+KV+ +NISL N + N+ + SK V R W DLQQS+N
Sbjct: 351  PPIKFRAPTKGGDSVMEHPQTVLLSKVLQANISLGNAYTNNLQSSKAVVRLWMDLQQSVN 410

Query: 1314 VLFGNSKTAGLRENMATGICQLLEKKEGIFRQKMMGKRVNYACRSVISPDPYLAVNEIGI 1493
            +LF +        ++++GICQLLEKKEG+FRQKMMGKRVN+ACRSVISPDPYLAVNEIGI
Sbjct: 411  LLFDSKTAMSQGRDVSSGICQLLEKKEGMFRQKMMGKRVNFACRSVISPDPYLAVNEIGI 470

Query: 1494 PPYFALRLTYPERVTPWNVNKLRDAIINGAEVHPGATHYVDKLATVKLPPNRKIRTSISR 1673
            PPYFALRLTYPERVTPWNV KLR+AIING+E HPGATHYVDKL+T +LPP++K R SISR
Sbjct: 471  PPYFALRLTYPERVTPWNVVKLREAIINGSEFHPGATHYVDKLSTKRLPPSQKARISISR 530

Query: 1674 KLHSSRGVVAQPGKNLEHELEGKVVYRHLQDGDIVLVNRQPTLHKPSIMAHVVRVLSGEK 1853
            KL SSRG +AQPGKNL++E EGK+V RHLQDGD+VLVNRQPTLHKPSIMAHVVRVL GEK
Sbjct: 531  KLPSSRGAIAQPGKNLDYEFEGKIVLRHLQDGDVVLVNRQPTLHKPSIMAHVVRVLKGEK 590

Query: 1854 TLRMHYANCSTYNADFDGDEMNVHFPQDEISRAEAFNIVNANNQYILPTSGEPTRGLIQD 2033
            T+RMHYANCSTYNADFDGDE+NVHFPQDEISRAEA+NIVNANNQY+ P++GEP R LIQD
Sbjct: 591  TIRMHYANCSTYNADFDGDEINVHFPQDEISRAEAYNIVNANNQYVRPSNGEPIRALIQD 650

Query: 2034 HIVSAVLLTKKDTFLTWEEYNHLLYSSGVSAAARDFFSSKPGQKVSVINSEAEIEPILPA 2213
            HIVSAVLLTK+DTFL+ +E+N LLYSSGVS+ A++ FS KPGQKV V  SE  + PI+PA
Sbjct: 651  HIVSAVLLTKRDTFLSRDEFNQLLYSSGVSSLAQNSFSGKPGQKVFVSTSEEGMLPIIPA 710

Query: 2214 ILKPVPMWTGKQVITSLLNHISRTRGFEPLTVEKSGKIKKEYF----------------- 2342
            ILKP P+WTGKQVI+S+L+HI  TRG  P TV K+ KI +++F                 
Sbjct: 711  ILKPKPLWTGKQVISSVLSHI--TRGRPPFTVGKTAKIPRDFFRNRRNKNKQSSREENQP 768

Query: 2343 ---GRKS-----------DEANLLIQKNELVHGVIDKAQFGEYGLVHTVQEFYGSDTAGI 2480
               G+K+           DE  +LI +N+LV GVIDKAQF +YGLVHTVQE YGS+TAGI
Sbjct: 769  KNDGQKAKVAEKNSKKEPDEEKILIYRNDLVRGVIDKAQFADYGLVHTVQELYGSNTAGI 828

Query: 2481 LLSVLSRLFTVFLQMHGFTCGVDDLLIVQELDMERMKKLQRSDKIGEEQHAKFIGAKEGD 2660
            LLSV SRLFTVFLQMHGFTCGVDDLLI+++ D+ER K+L+  +K   E H +  G K   
Sbjct: 829  LLSVFSRLFTVFLQMHGFTCGVDDLLIMEDKDIERKKQLEDCEKKVTEAHYELFGVKVN- 887

Query: 2661 IDQMELQVEIEKAIRIKGESAITQLDRMMSSELNDLTSV-VNSELFPKGLLKPFPKNCLS 2837
              + ELQ+EIE+ IR  GE+A+T LDR M S LN+ +S  V +EL  +GL+K   +NC+S
Sbjct: 888  -SETELQLEIERTIRRDGETALTALDRKMISVLNENSSKGVLTELLSEGLVKSMGENCIS 946

Query: 2838 LMTTSGAKGSLVNFTQISSLLGQQQLEGKRVPRMVSGKTLPCFPPWDPASRAGGFITDRF 3017
            LMTTSGAKGS VNF QISS LGQQ+LEGKRVPRMVSGKTLPCF PWD A+RAGGFI+DRF
Sbjct: 947  LMTTSGAKGSKVNFQQISSFLGQQELEGKRVPRMVSGKTLPCFHPWDWAARAGGFISDRF 1006

Query: 3018 LTGLRPQEYYFHCMAGREGLVDTAVKTSRSGYLQRCLVKSLECLKVCYDHTVRDADGSVV 3197
            L+GLRPQEYYFHCMAGREGLVDTAVKTSRSGYLQRCL+K+LECLK+ YDHTVRDADGS+V
Sbjct: 1007 LSGLRPQEYYFHCMAGREGLVDTAVKTSRSGYLQRCLIKNLECLKISYDHTVRDADGSIV 1066

Query: 3198 QFCYGEDGVDVHKTSFVTKFDTLAANQRVL-ERLGDHFEDAQMKSDDYIKELPEALEQKT 3374
            QF YGEDG+DVH+TSF+ KF+ LA NQ ++ E+L     +     DD  K LP+ L  K 
Sbjct: 1067 QFIYGEDGIDVHQTSFIAKFEALALNQDMMSEKLCSQLGE----PDDSDKILPDGLRSKA 1122

Query: 3375 KDFLSNLTKQQRHSLHLRKRKDFXXXXXXXXXXXXAQPGEPVGVIAAQSVGQPSTQMTLN 3554
            + F+    K+ +H     K KDF            AQPGEPVGV+AAQSVG+PSTQMTLN
Sbjct: 1123 EQFIREEIKKYQH--QKIKPKDFLNLLKLKFLSSLAQPGEPVGVLAAQSVGEPSTQMTLN 1180

Query: 3555 TFHHAGLGAMNVTLGIPRLQEILMRASETIQTPVMTCPLLMGKTWDDAKRLAATLKKVSV 3734
            TFH AG G MNVTLGIPRLQEILM AS  I+TPVMTCPL  GKT +DA  LA  +KK++V
Sbjct: 1181 TFHLAGRGEMNVTLGIPRLQEILMTASIDIRTPVMTCPLHKGKTKEDALCLANKMKKITV 1240

Query: 3735 ADIVESIEVCVVPFSVKKHQVSSIYKLKMKLYRPELYPPFSDITLEDCLKTMEVLFVGEL 3914
            ADI+ES+EV V PF+V    + SIYKLKM L +P+ Y   SDIT++DC   ++V+F+ EL
Sbjct: 1241 ADILESMEVSVAPFAVDNGDICSIYKLKMMLGKPDKYFENSDITVKDCEHILKVVFLREL 1300

Query: 3915 EEEIQAHLIMLSKISGIKNIVLSAQSGSSKDIDEGDTGSKSQQVGEENDENAGD 4076
            E+ IQ HL++LSKISGIK  +  +Q  +S ++DE  +  +S++   ++D++  D
Sbjct: 1301 EDAIQNHLVLLSKISGIKKFMPDSQRNASNEMDEDVSEGRSRETKNDDDDDDDD 1354


>ref|XP_007028853.1| Nuclear RNA polymerase A1, putative isoform 1 [Theobroma cacao]
            gi|508717458|gb|EOY09355.1| Nuclear RNA polymerase A1,
            putative isoform 1 [Theobroma cacao]
          Length = 1665

 Score = 1579 bits (4088), Expect = 0.0
 Identities = 834/1375 (60%), Positives = 1009/1375 (73%), Gaps = 38/1375 (2%)
 Frame = +3

Query: 66   MAYTTEGATESVEAVGFSFLTNEEVRTLSFKKITNPILLDNLGRPAPDGLYDPAMGPLED 245
            MA  TEGAT+SVEAV F+F+T EEVR  SF K+TN  LLD + RP P GLYD  +GPLED
Sbjct: 1    MAQITEGATDSVEAVRFNFMTTEEVRKHSFLKVTNANLLDLMDRPMPGGLYDAVLGPLED 60

Query: 246  RTLCKSCGQRSFQCPGHCGHIDLVSPIYNPLLFRILFNLLQRTCFFCYHFRVNREQVKKC 425
            RT CKSCG     CPGHCGHIDLVSPIYNPLLF  L  LLQR CFFCYHFR  + +V++C
Sbjct: 61   RTPCKSCGLLKLHCPGHCGHIDLVSPIYNPLLFNFLHTLLQRICFFCYHFRAEKTEVERC 120

Query: 426  ALQLELIIKGDIVGAKXXXXXXXXXXXXXXXXXRVHVKGLPRQVPNYNSKNLKQHSWTSL 605
              QL+LI  GDIVGAK                      G       +NS+ +K   WTSL
Sbjct: 121  VSQLKLIGNGDIVGAKRLDSDSADASSYSDYNEGSQESG----SIVHNSEAVKPKEWTSL 176

Query: 606  QYSEAMSLLDELMTGQKTECKRCGAKNPKITCPNFGWFHVN-MPNKYTRANIIKGSKLNK 782
            Q  EAMS+L+  +  +  +CK C AKNP IT P FGW H+N M     R N+I+G K+  
Sbjct: 177  QLMEAMSVLNNFLKLKYNKCKNCDAKNPNITKPVFGWLHMNGMLGAQMRENVIRGCKMVD 236

Query: 783  LSMGKAKRNSTGEEENANDSSAMGDVDSTDAESSGVVYDGTPDSAQKV--KGGYLYPEFL 956
                +A    +G E+  + SS+   VD  + ++S + + G+  +  K   K   +  EF+
Sbjct: 237  TFSDEA---GSGLEDADDVSSSGNGVDIAEMDTSEIGFTGSEGNGAKARKKKAQVPLEFM 293

Query: 957  KQKEFFSGPLLPSEVKNHMKLLWENETQLCSLICDIQQERLSISGMKGNYSMFFIEALLV 1136
            KQK  FSGPLLPSEVK   KLLWENE +LCS+I DIQQ+     G K  YSMFF+E +LV
Sbjct: 294  KQKNLFSGPLLPSEVKKITKLLWENEVELCSIISDIQQQGF---GKKVGYSMFFLETILV 350

Query: 1137 PPIKFRPPSKGGDSVMEHPQTVLLNKVMYSNISLCNEHMNSSERSKIVPR-WFDLQQSIN 1313
            PPIKFR P+KGGDSVMEHPQTVLL+KV+ +NISL N + N+ + SK V R W DLQQS+N
Sbjct: 351  PPIKFRAPTKGGDSVMEHPQTVLLSKVLQANISLGNAYTNNLQSSKAVVRLWMDLQQSVN 410

Query: 1314 VLFGNSKTAGLRENMATGICQLLEKKEGIFRQKMMGKRVNYACRSVISPDPYLAVNEIGI 1493
            +LF +        ++++GICQLLEKKEG+FRQKMMGKRVN+ACRSVISPDPYLAVNEIGI
Sbjct: 411  LLFDSKTAMSQGRDVSSGICQLLEKKEGMFRQKMMGKRVNFACRSVISPDPYLAVNEIGI 470

Query: 1494 PPYFALRLTYPERVTPWNVNKLRDAIINGAEVHPGATHYVDKLATVKLPPNRKIRTSISR 1673
            PPYFALRLTYPERVTPWNV KLR+AIING+E HPGATHYVDKL+T +LPP++K R SISR
Sbjct: 471  PPYFALRLTYPERVTPWNVVKLREAIINGSEFHPGATHYVDKLSTKRLPPSQKARISISR 530

Query: 1674 KLHSSRGVVAQPGKNLEHELEGKVVYRHLQDGDIVLVNRQPTLHKPSIMAHVVRVLSGEK 1853
            KL SSRG +AQPGKNL++E EGK+V RHLQDGD+VLVNRQPTLHKPSIMAHVVRVL GEK
Sbjct: 531  KLPSSRGAIAQPGKNLDYEFEGKIVLRHLQDGDVVLVNRQPTLHKPSIMAHVVRVLKGEK 590

Query: 1854 TLRMHYANCSTYNADFDGDEMNVHFPQDEISRAEAFNIVNANNQYILPTSGEPTRGLIQD 2033
            T+RMHYANCSTYNADFDGDE+NVHFPQDEISRAEA+NIVNANNQY+ P++GEP R LIQD
Sbjct: 591  TIRMHYANCSTYNADFDGDEINVHFPQDEISRAEAYNIVNANNQYVRPSNGEPIRALIQD 650

Query: 2034 HIVSAVLLTKKDTFLTWEEYNHLLYSSGVSAAARDFFSSKPGQKVSVINSEAEIEPILPA 2213
            HIVSAVLLTK+DTFL+ +E+N LLYSSGVS+ A++ FS KPGQKV V  SE  + PI+PA
Sbjct: 651  HIVSAVLLTKRDTFLSRDEFNQLLYSSGVSSLAQNSFSGKPGQKVFVSTSEEGMLPIIPA 710

Query: 2214 ILKPVPMWTGKQVITSLLNHISRTRGFEPLTVEKSGKIKKEYF----------------- 2342
            ILKP P+WTGKQVI+S+L+HI  TRG  P TV K+ KI +++F                 
Sbjct: 711  ILKPKPLWTGKQVISSVLSHI--TRGRPPFTVGKTAKIPRDFFRNRRNKNKQSSREENQP 768

Query: 2343 ---GRKS-----------DEANLLIQKNELVHGVIDKAQFGEYGLVHTVQEFYGSDTAGI 2480
               G+K+           DE  +LI +N+LV GVIDKAQF +YGLVHTVQE YGS+TAGI
Sbjct: 769  KNDGQKAKVAEKNSKKEPDEEKILIYRNDLVRGVIDKAQFADYGLVHTVQELYGSNTAGI 828

Query: 2481 LLSVLSRLFTVFLQMHGFTCGVDDLLIVQELDMERMKKLQRSDKIGEEQHAKFIGAK-EG 2657
            LLSV SRLFTVFLQMHGFTCGVDDLLI+++ D+ER K+L+  +K   E H +  G K   
Sbjct: 829  LLSVFSRLFTVFLQMHGFTCGVDDLLIMEDKDIERKKQLEDCEKKVTEAHYELFGVKVNS 888

Query: 2658 DIDQMELQVEIEKAIRIKGESAITQLDRMMSSELNDLTSV-VNSELFPKGLLKPFPKNCL 2834
            +    ELQ+EIE+ IR  GE+A+T LDR M S LN+ +S  V +EL  +GL+K   +NC+
Sbjct: 889  ETAPTELQLEIERTIRRDGETALTALDRKMISVLNENSSKGVLTELLSEGLVKSMGENCI 948

Query: 2835 SLMTTSGAKGSLVNFTQISSLLGQQQLEGKRVPRMVSGKTLPCFPPWDPASRAGGFITDR 3014
            SLMTTSGAKGS VNF QISS LGQQ+LEGKRVPRMVSGKTLPCF PWD A+RAGGFI+DR
Sbjct: 949  SLMTTSGAKGSKVNFQQISSFLGQQELEGKRVPRMVSGKTLPCFHPWDWAARAGGFISDR 1008

Query: 3015 FLTGLRPQEYYFHCMAGREGLVDTAVKTSRSGYLQRCLVKSLECLKVCYDHTVRDADGSV 3194
            FL+GLRPQEYYFHCMAGREGLVDTAVKTSRSGYLQRCL+K+LECLK+ YDHTVRDADGS+
Sbjct: 1009 FLSGLRPQEYYFHCMAGREGLVDTAVKTSRSGYLQRCLIKNLECLKISYDHTVRDADGSI 1068

Query: 3195 VQFCYGEDGVDVHKTSFVTKFDTLAANQRVL-ERLGDHFEDAQMKSDDYIKELPEALEQK 3371
            VQF YGEDG+DVH+TSF+ KF+ LA NQ ++ E+L     +     DD  K LP+ L  K
Sbjct: 1069 VQFIYGEDGIDVHQTSFIAKFEALALNQDMMSEKLCSQLGE----PDDSDKILPDGLRSK 1124

Query: 3372 TKDFLSNLTKQQRHSLHLRKRKDFXXXXXXXXXXXXAQPGEPVGVIAAQSVGQPSTQMTL 3551
             + F+    K+ +H     K KDF            AQPGEPVGV+AAQSVG+PSTQMTL
Sbjct: 1125 AEQFIREEIKKYQH--QKIKPKDFLNLLKLKFLSSLAQPGEPVGVLAAQSVGEPSTQMTL 1182

Query: 3552 NTFHHAGLGAMNVTLGIPRLQEILMRASETIQTPVMTCPLLMGKTWDDAKRLAATLKKVS 3731
            NTFH AG G MNVTLGIPRLQEILM AS  I+TPVMTCPL  GKT +DA  LA  +KK++
Sbjct: 1183 NTFHLAGRGEMNVTLGIPRLQEILMTASIDIRTPVMTCPLHKGKTKEDALCLANKMKKIT 1242

Query: 3732 VADIVESIEVCVVPFSVKKHQVSSIYKLKMKLYRPELYPPFSDITLEDCLKTMEVLFVGE 3911
            VADI+ES+EV V PF+V    + SIYKLKM L +P+ Y   SDIT++DC   ++V+F+ E
Sbjct: 1243 VADILESMEVSVAPFAVDNGDICSIYKLKMMLGKPDKYFENSDITVKDCEHILKVVFLRE 1302

Query: 3912 LEEEIQAHLIMLSKISGIKNIVLSAQSGSSKDIDEGDTGSKSQQVGEENDENAGD 4076
            LE+ IQ HL++LSKISGIK  +  +Q  +S ++DE  +  +S++   ++D++  D
Sbjct: 1303 LEDAIQNHLVLLSKISGIKKFMPDSQRNASNEMDEDVSEGRSRETKNDDDDDDDD 1357


>ref|XP_002526734.1| DNA-directed RNA polymerase I largest subunit, putative [Ricinus
            communis] gi|223533923|gb|EEF35648.1| DNA-directed RNA
            polymerase I largest subunit, putative [Ricinus communis]
          Length = 1686

 Score = 1574 bits (4076), Expect = 0.0
 Identities = 839/1367 (61%), Positives = 995/1367 (72%), Gaps = 34/1367 (2%)
 Frame = +3

Query: 78   TEGATESVEAVGFSFLTNEEVRTLSFKKITNPILLDNLGRPAPDGLYDPAMGPLEDRTLC 257
            ++GATES++++ FSFLT+EEVR  SF KITNP LLD + RP P GLYDPA+GPL +RT+C
Sbjct: 8    SKGATESIDSISFSFLTDEEVRKHSFVKITNPRLLDLVERPVPGGLYDPALGPLSERTIC 67

Query: 258  KSCGQRSFQCPGHCGHIDLVSPIYNPLLFRILFNLLQRTCFFCYHFRVNREQVKKCALQL 437
            K+CGQRS  CPGHCGHIDLVSP+YNPLLF  L  LLQRTCF C+HFR+ R QV+KC  QL
Sbjct: 68   KTCGQRSTNCPGHCGHIDLVSPVYNPLLFNFLHKLLQRTCFLCFHFRMQRGQVEKCIKQL 127

Query: 438  ELIIKGDIVGAKXXXXXXXXXXXXXXXXXRVHVK--GLPRQVPNYNSKNLKQHSWTSLQY 611
            ELI+KGDIVGAK                   H     +   V   + ++ +Q  WTSLQ+
Sbjct: 128  ELIVKGDIVGAKRLESVSPSEALYPEESDLSHESCPTIHSGVQCNDGEHTRQQGWTSLQF 187

Query: 612  SEAMSLLDELMTGQKTECKRCGAKNPKITCPNFGWFHVN-MPNKYTRANIIKGSKLNKLS 788
            +EAMS+L+  +  +  +CK C + NP IT P FGWFH + M +   RAN+I G +L  L 
Sbjct: 188  TEAMSVLNNFLKPKFKKCKNCESSNPNITKPTFGWFHTSGMSDASIRANVITGHQLGGLL 247

Query: 789  MGKAKRNSTGEEENANDSSAMGDVDSTDAESSGVVYDGTPDSAQKVKGGYLYPEFLKQKE 968
                             S   G  D  DA   G  + GT    +K +   L  EF +QK 
Sbjct: 248  ----------------GSEIEGTTDVEDAAEPGDQHSGTKKHKKKERKEVL--EFTRQKS 289

Query: 969  FFSGPLLPSEVKNHMKLLWENETQLCSLICDIQQERLSISGMKGNYSMFFIEALLVPPIK 1148
             FS  LLPSEVK  ++LLW+NE ++CS I D+QQ+       K   +MFF+E +LVPPIK
Sbjct: 290  TFSKQLLPSEVKEKLELLWKNEARICSFISDLQQQEFG--KRKAGPAMFFLETILVPPIK 347

Query: 1149 FRPPSKGGDSVMEHPQTVLLNKVMYSNISLCNEHMNSSERSKIVPRWFDLQQSINVLFGN 1328
            FRPP+KGGDSVMEHPQTVLL+KV+ SNISL + H+N  E SKIV RW DLQQSIN LF +
Sbjct: 348  FRPPTKGGDSVMEHPQTVLLSKVLQSNISLGDAHINK-EHSKIVRRWLDLQQSINTLF-D 405

Query: 1329 SKTA---GLRENMATGICQLLEKKEGIFRQKMMGKRVNYACRSVISPDPYLAVNEIGIPP 1499
            SKTA   G RE  A GICQLLEKKEG+FRQKMMGKRVNYACRSVISPDPY+ VNEIGIPP
Sbjct: 406  SKTAKGPGQREG-APGICQLLEKKEGLFRQKMMGKRVNYACRSVISPDPYIGVNEIGIPP 464

Query: 1500 YFALRLTYPERVTPWNVNKLRDAIINGAEVHPGATHYVDKLATVKLPPNRKIRTSISRKL 1679
             FA++LTYPERVTPWN+ KLR+A+ING+E HPGATHYVDKL+  KLPP RK R SISRKL
Sbjct: 465  CFAVKLTYPERVTPWNIAKLRNAVINGSECHPGATHYVDKLSINKLPPARKARISISRKL 524

Query: 1680 HSSRGVVAQPGKNLEHELEGKVVYRHLQDGDIVLVNRQPTLHKPSIMAHVVRVLSGEKTL 1859
             SSRG V Q GK  E E EGK+VYRHLQDGD+VLVNRQPTLHKPSIMAHVVRVL GEKTL
Sbjct: 525  PSSRGAVTQAGKGSECEFEGKIVYRHLQDGDVVLVNRQPTLHKPSIMAHVVRVLKGEKTL 584

Query: 1860 RMHYANCS-TYNADFDGDEMNVHFPQDEISRAEAFNIVNANNQYILPTSGEPTRGLIQDH 2036
            RMHYANCS TYNADFDGDEMNVHFPQDE+SRAEA+NIVNANNQ++ P++GEP RGLIQDH
Sbjct: 585  RMHYANCSITYNADFDGDEMNVHFPQDEVSRAEAYNIVNANNQFVRPSNGEPLRGLIQDH 644

Query: 2037 IVSAVLLTKKDTFLTWEEYNHLLYSSGVSAAARDFFSSKPGQKVSVINSEAEIEPILPAI 2216
            IVSAVLLTKKDTFL+ +E+N LLYSSGVS    + F  +PGQKV    SE EI+ + PAI
Sbjct: 645  IVSAVLLTKKDTFLSQDEFNQLLYSSGVSTVGPNSFHGRPGQKVLWSRSEDEIQTLPPAI 704

Query: 2217 LKPVPMWTGKQVITSLLNHISRTRGFEPLTVEKSGKIKKEYF------------------ 2342
             KP P+WTGKQVIT++LNHI  T    P TVEK  KI   +F                  
Sbjct: 705  WKPKPLWTGKQVITAILNHI--TSDHPPFTVEKDAKIPSNFFKSRANEDKPCQEEKSDKD 762

Query: 2343 ---GRKSDEANLLIQKNELVHGVIDKAQFGEYGLVHTVQEFYGSDTAGILLSVLSRLFTV 2513
                ++ DE  +L+ KNELV GVIDK QFGEYGLVHTV E  GS TAGILLSVLSRLFT 
Sbjct: 763  APAEKEPDEEKMLVYKNELVRGVIDKGQFGEYGLVHTVHELLGSHTAGILLSVLSRLFTA 822

Query: 2514 FLQMHGFTCGVDDLLIVQELDMERMKKLQRSDKIGEEQHAKFIGAKEG--DIDQMELQVE 2687
            +LQMHGFTCGVDDLLI+   D ER K+L+  +K GE  H  FIG K+    ID + +Q+ 
Sbjct: 823  YLQMHGFTCGVDDLLILTNKDEERKKQLEWCEKSGEAVHRNFIGIKDEKIKIDPVAMQLN 882

Query: 2688 IEKAIRIKGESAITQLDRMMSSELNDLTSV-VNSELFPKGLLKPFPKNCLSLMTTSGAKG 2864
            IEK IR  G+SA+  LDR MS+ELN  TS  V S L   GLLKP  KNC+SLMTTSGAKG
Sbjct: 883  IEKTIRSDGDSALAYLDRQMSNELNTKTSSGVISNLLSDGLLKPSGKNCISLMTTSGAKG 942

Query: 2865 SLVNFTQISSLLGQQQLEGKRVPRMVSGKTLPCFPPWDPASRAGGFITDRFLTGLRPQEY 3044
            S VNF QISS LGQQ+LEGKRVPRMVSGKTLPCF PWD A+R+GG+ITDRFLTGLRPQEY
Sbjct: 943  SKVNFQQISSFLGQQELEGKRVPRMVSGKTLPCFHPWDWAARSGGYITDRFLTGLRPQEY 1002

Query: 3045 YFHCMAGREGLVDTAVKTSRSGYLQRCLVKSLECLKVCYDHTVRDADGSVVQFCYGEDGV 3224
            YFHCMAGREGLVDTAVKTSRSGYLQRCL+K+LECLK+ YDHTVRDADGSVVQF YGEDGV
Sbjct: 1003 YFHCMAGREGLVDTAVKTSRSGYLQRCLIKNLECLKIGYDHTVRDADGSVVQFYYGEDGV 1062

Query: 3225 DVHKTSFVTKFDTLAANQ-RVLERLGDHFEDAQMKSDDYIKELPEALEQKTKDFLSNLTK 3401
            DVH+TSF+ KF  LA NQ  + +R G          + YI ELPEAL++K   FL + + 
Sbjct: 1063 DVHQTSFIAKFKELALNQDMIYKRSGGQLG----AFNSYISELPEALKEKADRFLDDFSI 1118

Query: 3402 QQRHSLHLRKRKDFXXXXXXXXXXXXAQPGEPVGVIAAQSVGQPSTQMTLNTFHHAGLGA 3581
              R + +L KR+D             AQPGEPVGV+AAQSVG+PSTQMTLNTFH AG G 
Sbjct: 1119 MGRIASNLVKREDLYNLMKQKFLLSLAQPGEPVGVLAAQSVGEPSTQMTLNTFHLAGRGE 1178

Query: 3582 MNVTLGIPRLQEILMRASETIQTPVMTCPLLMGKTWDDAKRLAATLKKVSVADIVESIEV 3761
            MNVTLGIPRLQEILM AS  I+TP+MTCPL  G+T +DA  LA  L+KV+VADIVES+EV
Sbjct: 1179 MNVTLGIPRLQEILMTASIDIKTPIMTCPLQEGRTNEDADHLADKLRKVTVADIVESMEV 1238

Query: 3762 CVVPFSVKKHQVSSIYKLKMKLYRPELYPPFSDITLEDCLKTMEVLFVGELEEEIQAHLI 3941
             VVPF+++   V  IYKLKMKLYRP  YP +++I++ED  +T+EV+F+ ELE+ IQ H+ 
Sbjct: 1239 SVVPFAIQDGGVCRIYKLKMKLYRPAHYPQYANISVEDWEETLEVVFLRELEDAIQNHMF 1298

Query: 3942 MLSKISGIKNIVLSAQSGSSKDIDEGDTGSKS--QQVGEENDENAGD 4076
            +LS+ISGIK+ +  ++S +S + DE   G  S  ++  ++ND++ G+
Sbjct: 1299 LLSRISGIKDFLPESRSRASGEADEDVAGDMSHREERDDDNDDDDGE 1345


>ref|XP_006493898.1| PREDICTED: DNA-directed RNA polymerase I subunit rpa1-like [Citrus
            sinensis]
          Length = 1715

 Score = 1569 bits (4063), Expect = 0.0
 Identities = 826/1401 (58%), Positives = 1015/1401 (72%), Gaps = 64/1401 (4%)
 Frame = +3

Query: 66   MAYTTEGATESVEAVGFSFLTNEEVRTLSFKKITNPILLDNLGRPAPDGLYDPAMGPLED 245
            M  TTE  TESV+AV FSFLT+EEVR  SF K+  P+LLD +GRP P GLYDP +GPL++
Sbjct: 1    MNQTTEVTTESVKAVWFSFLTDEEVRKQSFLKLKEPLLLDRVGRPLPGGLYDPILGPLDE 60

Query: 246  RTLCKSCGQRSFQCPGHCGHIDLVSPIYNPLLFRILFNLLQRTCFFCYHFRVNREQVKKC 425
             + CK+CGQR F CPGH GHIDLV P+YNPLLF +L+ LL+R CFFC+HF+ +R +V+KC
Sbjct: 61   TSSCKTCGQRQFLCPGHFGHIDLVVPVYNPLLFNLLYTLLKRICFFCHHFKASRREVEKC 120

Query: 426  ALQLELIIKGDIVGAKXXXXXXXXXXXXXXXXXRVHVKGLPRQVP--NY-NSKNLKQHSW 596
              +LELIIKGDI+ AK                   +        P  NY N +NLK   W
Sbjct: 121  VRKLELIIKGDIIAAKSLDLDLPSESSNPEDSDVSNKSSCSMVTPRGNYDNVRNLKPQEW 180

Query: 597  TSLQYSEAMSLLDELMTGQKTECKRCGAKNPKITCPNFGWFHVN-MPNKYTRANIIKGSK 773
            TSLQ++EA   L + +  + T+C  C AKNP+I+ P FGW H+N MP+   RAN+I+G  
Sbjct: 181  TSLQFAEAKLALLQFLKIETTKCGNCKAKNPRISKPTFGWIHMNGMPHADIRANLIRGCN 240

Query: 774  LNKLSMGKAKRNSTGEEENANDSSAMGDVDSTDAESSGVVYDGTPDSAQK--VKGGYLYP 947
            L +   G       GEEE   D  A  DVD+ +  S    + GT D+A +   KG    P
Sbjct: 241  LGETFSG-------GEEEK--DLGASSDVDAPETHSFNGTFPGTQDTAARRHQKGSGAVP 291

Query: 948  E-FLKQKEFFSGPLLPSEVKNHMKLLWENETQLCSLICDIQQERLSISGMKGNYSMFFIE 1124
              F KQK+ FSGPLLPS+VK+ ++ LWENE +LCS I D+QQ+     G K  +S+FF+ 
Sbjct: 292  SGFKKQKDLFSGPLLPSDVKDIIEKLWENEFELCSFISDMQQQGF---GKKAGHSIFFLG 348

Query: 1125 ALLVPPIKFRPPSKGGDSVMEHPQTVLLNKVMYSNISLCNEHMNSSERSKI-VPRWFDLQ 1301
            A+LVPPIKFR PSKGGDSVMEHPQTVLL+KV+ +NI L N ++N  + +KI V RW +LQ
Sbjct: 349  AVLVPPIKFRLPSKGGDSVMEHPQTVLLSKVLQANIYLANAYVNQPDNAKIIVTRWMNLQ 408

Query: 1302 QSINVLFGNSKTAGLRENMATGICQLLEKKEGIFRQKMMGKRVNYACRSVISPDPYLAVN 1481
            QS+NVLF     AG R+ MA+GICQLLEKKEG+FRQK+MGKRVNYACRSVISPDPYLAVN
Sbjct: 409  QSVNVLFDGKNAAGQRD-MASGICQLLEKKEGLFRQKLMGKRVNYACRSVISPDPYLAVN 467

Query: 1482 EIGIPPYFALRLTYPERVTPWNVNKLRDAIINGAEVHPGATHYVDKLATVKLPPNRKIRT 1661
            EIGIPPYFALRLTYPERVTPWNV KLRD+IINGAE+HPGATHY+DKL+T++LPPN+K+R 
Sbjct: 468  EIGIPPYFALRLTYPERVTPWNVVKLRDSIINGAEIHPGATHYLDKLSTMRLPPNKKMRI 527

Query: 1662 SISRKLHSSRGVVAQPGKNLEHELEGKVVYRHLQDGDIVLVNRQPTLHKPSIMAHVVRVL 1841
            SI+RKL +SRG + QPGK+ ++E EGK+VYRHLQDGD+VLVNRQPTLHKPSIMAHVVRVL
Sbjct: 528  SIARKLDTSRGAIVQPGKDSDNEFEGKIVYRHLQDGDVVLVNRQPTLHKPSIMAHVVRVL 587

Query: 1842 SGEKTLRMHYANCSTYNADFDGDEMNVHFPQDEISRAEAFNIVNANNQYILPTSGEPTRG 2021
             GEKTLRMHYANCSTYNADFDGDEMNVHFPQDE+SRAEA+NIVNANNQY+ P++G+P R 
Sbjct: 588  KGEKTLRMHYANCSTYNADFDGDEMNVHFPQDEVSRAEAYNIVNANNQYVRPSNGDPLRS 647

Query: 2022 LIQDHIVSAVLLTKKDTFLTWEEYNHLLYSSGVSAAARDFFSSKPGQKVSVINSEAEIEP 2201
            LIQDHIVSA LLTKKDTFL  +E+  LLYSSGVS++    F+ KPGQ+V +  SE E+ P
Sbjct: 648  LIQDHIVSAALLTKKDTFLNRDEFCQLLYSSGVSSSGLGSFTGKPGQRVLISRSEQEVLP 707

Query: 2202 ILPAILKPVPMWTGKQVITSLLNHISRTRGFEPLTVEKSGKIKKEYF------------- 2342
            +LPAI KP P+WTGKQVIT++LNHI  TRG  P  VE+ GK+ +++F             
Sbjct: 708  LLPAIWKPEPLWTGKQVITAVLNHI--TRGRPPFVVERGGKLPQDFFKTRFNADKQSDRK 765

Query: 2343 ------------------GRKSD-----------------------EANLLIQKNELVHG 2399
                              G+K +                       E  LLI KN+LV G
Sbjct: 766  KNDKGKLSKTNKMHKDKSGKKKEVVEGKPGEEKEAEKNKSKEKELSEEKLLIYKNDLVRG 825

Query: 2400 VIDKAQFGEYGLVHTVQEFYGSDTAGILLSVLSRLFTVFLQMHGFTCGVDDLLIVQELDM 2579
            VIDKAQF +YGLVHTVQE YGS+TAG LLS LSRLFTVFLQMHGFTCGVDDLLI+++ + 
Sbjct: 826  VIDKAQFADYGLVHTVQELYGSNTAGTLLSALSRLFTVFLQMHGFTCGVDDLLILKDKER 885

Query: 2580 ERMKKLQRSDKIGEEQHAKFIGAKEG-DIDQMELQVEIEKAIRIKGESAITQLDRMMSSE 2756
            ER   L  S++IG+  H + +  ++G +ID ++L+ EIEKA+R  G++A+   D  M+S+
Sbjct: 886  ERKNHLHGSEEIGKRVHLEALELEDGAEIDPIKLKSEIEKAMRGGGDAAVAYFDMKMTSQ 945

Query: 2757 LNDLT-SVVNSELFPKGLLKPFPKNCLSLMTTSGAKGSLVNFTQISSLLGQQQLEGKRVP 2933
            LN  T S V +EL  +GLLKP  KN +SLMTTSGAKGS VNF QISS LGQQ+LEGKRVP
Sbjct: 946  LNKHTSSSVINELLSEGLLKPTGKNWISLMTTSGAKGSKVNFQQISSHLGQQELEGKRVP 1005

Query: 2934 RMVSGKTLPCFPPWDPASRAGGFITDRFLTGLRPQEYYFHCMAGREGLVDTAVKTSRSGY 3113
            RMVSGKTLP F PWD A RAGGFI DRFLTGLRPQEYYFHCMAGREGLVDTAVKTSRSGY
Sbjct: 1006 RMVSGKTLPSFHPWDWAPRAGGFIIDRFLTGLRPQEYYFHCMAGREGLVDTAVKTSRSGY 1065

Query: 3114 LQRCLVKSLECLKVCYDHTVRDADGSVVQFCYGEDGVDVHKTSFVTKFDTLAANQRVLER 3293
            LQRCL+K+LECLK+ YD++VRDADGS+VQFCYGEDGVDVH+TSF++KFD LAANQ ++ +
Sbjct: 1066 LQRCLIKNLECLKISYDYSVRDADGSIVQFCYGEDGVDVHQTSFISKFDALAANQEMIYK 1125

Query: 3294 LGDHFEDAQMKSDDYIKELPEALEQKTKDFLSNLTKQQRHSLHLRKRKDFXXXXXXXXXX 3473
                  DA   S+ YI ELP+AL+   + F       +        ++DF          
Sbjct: 1126 KCSGQLDA---SNAYIMELPDALKDNAEKFADKFLSNE------MAKQDFLKLVKHKFVL 1176

Query: 3474 XXAQPGEPVGVIAAQSVGQPSTQMTLNTFHHAGLGAMNVTLGIPRLQEILMRASETIQTP 3653
              AQPGEPVG++A+QSVG+PSTQMTLNTFH AG G MNVTLGIPRLQEIL  AS+ I+TP
Sbjct: 1177 SLAQPGEPVGLLASQSVGEPSTQMTLNTFHLAGRGEMNVTLGIPRLQEILTIASKDIKTP 1236

Query: 3654 VMTCPLLMGKTWDDAKRLAATLKKVSVADIVESIEVCVVPFSVKKHQVSSIYKLKMKLYR 3833
            V+TCPLL+GKT DDAKRLA  LKK++VADIV+ I V V  F+    Q  S+Y L M+LY+
Sbjct: 1237 VITCPLLVGKTEDDAKRLADKLKKITVADIVKKISVKVRAFTSHDGQACSVYVLTMELYK 1296

Query: 3834 PELYPPFSDITLEDCLKTMEVLFVGELEEEIQAHLIMLSKISGIKNIVLSAQSGSSKDID 4013
            P+ YP ++DITLED  + +EV+FV ELE+ IQ HL++LSKI+GIKN+       +S + D
Sbjct: 1297 PKNYPTYTDITLEDWEEILEVVFVRELEDTIQNHLLLLSKINGIKNVASGLTQKASNETD 1356

Query: 4014 EGDTGSKSQQVGEENDENAGD 4076
            +  +G+ SQ  G+++D +  D
Sbjct: 1357 QDGSGNVSQCRGDDDDADDAD 1377


>ref|XP_006421454.1| hypothetical protein CICLE_v10004132mg [Citrus clementina]
            gi|557523327|gb|ESR34694.1| hypothetical protein
            CICLE_v10004132mg [Citrus clementina]
          Length = 1715

 Score = 1559 bits (4037), Expect = 0.0
 Identities = 822/1401 (58%), Positives = 1011/1401 (72%), Gaps = 64/1401 (4%)
 Frame = +3

Query: 66   MAYTTEGATESVEAVGFSFLTNEEVRTLSFKKITNPILLDNLGRPAPDGLYDPAMGPLED 245
            M  TTE  TESV+AV FSFLT+EEVR  SF K+T P+LLD + RP P GLYDP +GPL++
Sbjct: 1    MNQTTEVTTESVKAVWFSFLTDEEVRKQSFLKLTEPLLLDRVSRPLPGGLYDPILGPLDE 60

Query: 246  RTLCKSCGQRSFQCPGHCGHIDLVSPIYNPLLFRILFNLLQRTCFFCYHFRVNREQVKKC 425
             + CK+CGQR F CPGH GHIDLV  +YNPLLF +L+ LL+R CFFC+HF+ +R +V+KC
Sbjct: 61   TSSCKTCGQRQFLCPGHFGHIDLVVSVYNPLLFNLLYTLLKRICFFCHHFKASRREVEKC 120

Query: 426  ALQLELIIKGDIVGAKXXXXXXXXXXXXXXXXXRVHVKGLPRQVP--NY-NSKNLKQHSW 596
              +LELIIKGDI+ AK                   +        P  NY N +NLK   W
Sbjct: 121  VRKLELIIKGDIIAAKSLDLDLPSESSNPEDSDVSNKSSCSMVTPRGNYDNVRNLKPQEW 180

Query: 597  TSLQYSEAMSLLDELMTGQKTECKRCGAKNPKITCPNFGWFHVN-MPNKYTRANIIKGSK 773
            TSLQ++EA   L + +  + T+C  C AKNP+I+ P FGW H+N MP+   RAN+I+G  
Sbjct: 181  TSLQFAEAKLALLQFLKIETTKCGNCKAKNPRISKPTFGWIHMNGMPHADIRANLIRGCN 240

Query: 774  LNKLSMGKAKRNSTGEEENANDSSAMGDVDSTDAESSGVVYDGTPDSAQK--VKGGYLYP 947
            L +   G       GEEE   D     DVD+ +  S    + GT D+A +   KG    P
Sbjct: 241  LGETFSG-------GEEEK--DLGTSSDVDAPETHSFNGAFPGTQDTAARRHQKGSGAVP 291

Query: 948  E-FLKQKEFFSGPLLPSEVKNHMKLLWENETQLCSLICDIQQERLSISGMKGNYSMFFIE 1124
              F KQK+ FSGPLLPS+VK+ ++ LWENE +LCS I D+QQ+     G K  +S+FF+ 
Sbjct: 292  SGFKKQKDLFSGPLLPSDVKDIIEKLWENEFELCSFISDMQQQGF---GKKAGHSIFFLG 348

Query: 1125 ALLVPPIKFRPPSKGGDSVMEHPQTVLLNKVMYSNISLCNEHMNSSERSK-IVPRWFDLQ 1301
             +LVPPIKFR PSKGGDSVMEHPQTVLL+KV+ +NI L N ++N  + +K IV RW +LQ
Sbjct: 349  VVLVPPIKFRLPSKGGDSVMEHPQTVLLSKVLQANIYLANAYVNQPDNAKVIVARWMNLQ 408

Query: 1302 QSINVLFGNSKTAGLRENMATGICQLLEKKEGIFRQKMMGKRVNYACRSVISPDPYLAVN 1481
            QS+NVLF     AG R+ +A+GICQLLEKKEG+FRQK+MGKRVNYACRSVISPDPYLAVN
Sbjct: 409  QSVNVLFDGKNAAGQRD-VASGICQLLEKKEGLFRQKLMGKRVNYACRSVISPDPYLAVN 467

Query: 1482 EIGIPPYFALRLTYPERVTPWNVNKLRDAIINGAEVHPGATHYVDKLATVKLPPNRKIRT 1661
            EIGIPPYFALRLTYPERVTPWNV KLRD+IINGAE+HPGATHY+DKL+T++LPPN+K+R 
Sbjct: 468  EIGIPPYFALRLTYPERVTPWNVVKLRDSIINGAEIHPGATHYLDKLSTMRLPPNKKMRI 527

Query: 1662 SISRKLHSSRGVVAQPGKNLEHELEGKVVYRHLQDGDIVLVNRQPTLHKPSIMAHVVRVL 1841
            SI RKL +SRG + QPGK+ ++E EGK+VYRHLQDGD+VLVNRQPTLHKPSIMAHVVRVL
Sbjct: 528  SIGRKLDTSRGAIVQPGKDSDNEFEGKMVYRHLQDGDVVLVNRQPTLHKPSIMAHVVRVL 587

Query: 1842 SGEKTLRMHYANCSTYNADFDGDEMNVHFPQDEISRAEAFNIVNANNQYILPTSGEPTRG 2021
             GEKTLRMHYANCSTYNADFDGDEMNVHFPQDE+SRAEA+NIVNANNQY+ P++G+P R 
Sbjct: 588  KGEKTLRMHYANCSTYNADFDGDEMNVHFPQDEVSRAEAYNIVNANNQYVRPSNGDPLRS 647

Query: 2022 LIQDHIVSAVLLTKKDTFLTWEEYNHLLYSSGVSAAARDFFSSKPGQKVSVINSEAEIEP 2201
            LIQDHIVSA LLTKKDTFL  +E+  LLYSSGVS++    F+ KPGQ+V +  SE E+ P
Sbjct: 648  LIQDHIVSAALLTKKDTFLNRDEFCQLLYSSGVSSSGLGSFTGKPGQRVLISRSEQEVLP 707

Query: 2202 ILPAILKPVPMWTGKQVITSLLNHISRTRGFEPLTVEKSGKIKKEYF----------GRK 2351
            +LPAI KP P+WTGKQVIT++LNHI  TRG  P  VE+ GK+ +++F          GRK
Sbjct: 708  LLPAIWKPEPLWTGKQVITAVLNHI--TRGRPPFIVERGGKLPQDFFKTRFNADKQSGRK 765

Query: 2352 SD--------------------------------------------EANLLIQKNELVHG 2399
             +                                            E  LLI KN+LV G
Sbjct: 766  KNDKGKLSKTNKMHKDKSGKKKEVVEGKPGEEKEAEKNKSKEKELSEEKLLIYKNDLVRG 825

Query: 2400 VIDKAQFGEYGLVHTVQEFYGSDTAGILLSVLSRLFTVFLQMHGFTCGVDDLLIVQELDM 2579
            VIDKAQF +YGLVHTVQE YGS+TAG LLS LSRLFTVFLQMHGFTCGVDDLLI+++ + 
Sbjct: 826  VIDKAQFADYGLVHTVQELYGSNTAGTLLSALSRLFTVFLQMHGFTCGVDDLLILKDKER 885

Query: 2580 ERMKKLQRSDKIGEEQHAKFIGAKEG-DIDQMELQVEIEKAIRIKGESAITQLDRMMSSE 2756
            ER   L  S++IG+  H + +  ++G +ID ++L+ EIEKA+R  G++A+   D  M+S+
Sbjct: 886  ERKNHLHGSEEIGKRVHLEALELEDGAEIDPIKLKSEIEKAMRGGGDAAVAYFDMKMTSQ 945

Query: 2757 LNDLT-SVVNSELFPKGLLKPFPKNCLSLMTTSGAKGSLVNFTQISSLLGQQQLEGKRVP 2933
            LN  T S V ++L  +GLLKP  KN +SLMTTSGAKGS VNF QISS LGQQ+LEGKRVP
Sbjct: 946  LNKHTSSSVINDLLSEGLLKPTGKNWISLMTTSGAKGSKVNFQQISSHLGQQELEGKRVP 1005

Query: 2934 RMVSGKTLPCFPPWDPASRAGGFITDRFLTGLRPQEYYFHCMAGREGLVDTAVKTSRSGY 3113
            RMVSGKTLP F PWD A RAGGFI DRFLTGLRPQEYYFHCMAGREGLVDTAVKTSRSGY
Sbjct: 1006 RMVSGKTLPSFHPWDWAPRAGGFIIDRFLTGLRPQEYYFHCMAGREGLVDTAVKTSRSGY 1065

Query: 3114 LQRCLVKSLECLKVCYDHTVRDADGSVVQFCYGEDGVDVHKTSFVTKFDTLAANQRVLER 3293
            LQRCL+K+LECLK+ YD++VRDADGS+VQFCYGEDGVDVH+TSF++KFD LAANQ ++ +
Sbjct: 1066 LQRCLIKNLECLKISYDYSVRDADGSIVQFCYGEDGVDVHQTSFISKFDALAANQEMIYK 1125

Query: 3294 LGDHFEDAQMKSDDYIKELPEALEQKTKDFLSNLTKQQRHSLHLRKRKDFXXXXXXXXXX 3473
                  DA   S+ YI ELP+AL+   + F       +        ++DF          
Sbjct: 1126 KCSGQLDA---SNAYIMELPDALKDNAEKFADKFLSNE------MAKQDFLKLVKHKFVL 1176

Query: 3474 XXAQPGEPVGVIAAQSVGQPSTQMTLNTFHHAGLGAMNVTLGIPRLQEILMRASETIQTP 3653
              AQPGEPVG++AAQSVG+PSTQMTLNTFH AG G MNVTLGIPRLQEIL  AS+ I+TP
Sbjct: 1177 SLAQPGEPVGLLAAQSVGEPSTQMTLNTFHLAGRGEMNVTLGIPRLQEILTIASKDIKTP 1236

Query: 3654 VMTCPLLMGKTWDDAKRLAATLKKVSVADIVESIEVCVVPFSVKKHQVSSIYKLKMKLYR 3833
            V+TCPLL+GKT DDAKRLA  LKK++VADIV+ I V V  F+    Q  ++Y L M+LY+
Sbjct: 1237 VITCPLLVGKTEDDAKRLADKLKKITVADIVKKISVKVRAFTSHDGQACTVYVLTMELYK 1296

Query: 3834 PELYPPFSDITLEDCLKTMEVLFVGELEEEIQAHLIMLSKISGIKNIVLSAQSGSSKDID 4013
            P+ YP ++DITLED  + +EV+FV ELE+ IQ HL++LSKI+GIKN+       +S + D
Sbjct: 1297 PKNYPTYTDITLEDWEEILEVVFVRELEDTIQNHLLLLSKINGIKNVASGLTQKASNETD 1356

Query: 4014 EGDTGSKSQQVGEENDENAGD 4076
            +  +G+ SQ  G+++D +  D
Sbjct: 1357 QEGSGNVSQCRGDDDDADDAD 1377


>ref|XP_004136744.1| PREDICTED: DNA-directed RNA polymerase I subunit RPA1-like [Cucumis
            sativus]
          Length = 1650

 Score = 1552 bits (4019), Expect = 0.0
 Identities = 830/1367 (60%), Positives = 991/1367 (72%), Gaps = 30/1367 (2%)
 Frame = +3

Query: 66   MAYTTEGATESVEAVGFSFLTNEEVRTLSFKKITNPILLDNLGRPAPDGLYDPAMGPLED 245
            MA TTEGA+ESV+ V FSF+TNEEVR  S  K+T PILLD +GRP   GLYDPAMG L++
Sbjct: 1    MAQTTEGASESVKVVTFSFMTNEEVRKQSVVKVTAPILLDGMGRPVSGGLYDPAMGSLDE 60

Query: 246  RTLCKSCGQRSFQCPGHCGHIDLVSPIYNPLLFRILFNLLQRTCFFCYHFRVNREQVKKC 425
             TLCKSCGQR F CPGHCGHIDLVSP+YNPLLF IL N L+ TCF C+HFR     V+ C
Sbjct: 61   TTLCKSCGQRPFYCPGHCGHIDLVSPVYNPLLFVILHNFLRCTCFSCHHFRAGESMVENC 120

Query: 426  ALQLELIIKGDIVGAKXXXXXXXXXXXXXXXXXRVHVKGLPRQVPNYNSKNLKQHSWTSL 605
               LELI+ G+I  AK                  ++          Y  KN +  +WTSL
Sbjct: 121  KTLLELILDGEIAKAKELEEEWMNSKSRTKSSHSMYT---------YERKNGQPETWTSL 171

Query: 606  QYSEAMSLLDELMTGQKTECKRCGAKNPKITCPNFGWFHVN-MPNKYTRANIIKGSKLNK 782
            Q+SEA+S++ + +  +++ CK CGAK+PKIT P FGWFH+  +     RAN I+ SK   
Sbjct: 172  QFSEAISVVTKFLKPKQSNCKYCGAKSPKITKPTFGWFHMKGLAGVQKRANAIRRSKPVS 231

Query: 783  LSMGKAKRNSTGEEENANDSSAMGDVDSTDAESSGVVYDGTPDSAQKVKGGYLYPEFLKQ 962
            +S G A+  S+ EEE   +++     D +                         PE   Q
Sbjct: 232  VSSG-AEGVSSLEEETTTEATVEDFEDVS-------------------------PEVFMQ 265

Query: 963  KEFFSGPLLPSEVKNHMKLLWENETQLCSLICDIQQERLSISGMKGNYSMFFIEALLVPP 1142
            K F SG LLPSEVK+ +K LW+NE  LCS I DI Q+     G K  +SMFF+E++LVPP
Sbjct: 266  KNFSSGHLLPSEVKDILKRLWKNEALLCSFISDISQQG---HGNKAGHSMFFLESVLVPP 322

Query: 1143 IKFRPPSKGGDSVMEHPQTVLLNKVMYSNISLCNEHMNSSERSKIVPRWFDLQQSINVLF 1322
            IKFRPP+KGGDSVMEHPQTVLLNKV+ SNISL N H N SE SKIV  W DLQQSIN+LF
Sbjct: 323  IKFRPPAKGGDSVMEHPQTVLLNKVLQSNISLGNGHANKSEHSKIVRLWMDLQQSINILF 382

Query: 1323 GNSKTAGLRENMAT-GICQLLEKKEGIFRQKMMGKRVNYACRSVISPDPYLAVNEIGIPP 1499
             +   AG  +N A+ GICQLLEKKEG+FRQKMMGKRVN+ACRSVISPDPYLAVNEIGIPP
Sbjct: 383  DSKSAAGPGKNDASLGICQLLEKKEGMFRQKMMGKRVNFACRSVISPDPYLAVNEIGIPP 442

Query: 1500 YFALRLTYPERVTPWNVNKLRDAIINGAEVHPGATHYVDKLATVKL--PPNRKIRTSISR 1673
            YFALRLTYPERVT WNV KLR+AIING E HPGATHY+DKLATVKL   P+RK R SISR
Sbjct: 443  YFALRLTYPERVTAWNVQKLRNAIINGPETHPGATHYIDKLATVKLNLKPSRKSRISISR 502

Query: 1674 KLHSSRGVVAQPGKNLEHELEGKVVYRHLQDGDIVLVNRQPTLHKPSIMAHVVRVLSGEK 1853
            KL SSRGVV   G + ++E EGK+V RHLQDGDIVLVNRQPTLHKPSIMAHVVRVL GEK
Sbjct: 503  KLPSSRGVVVDQGCD-DYEFEGKIVNRHLQDGDIVLVNRQPTLHKPSIMAHVVRVLKGEK 561

Query: 1854 TLRMHYANCS-TYNADFDGDEMNVHFPQDEISRAEAFNIVNANNQYILPTSGEPTRGLIQ 2030
            T+RMHYANCS TYNADFDGDEMNVHFPQDEISRAEA+NIVNANNQY+ PTSGEP R LIQ
Sbjct: 562  TIRMHYANCSITYNADFDGDEMNVHFPQDEISRAEAYNIVNANNQYVKPTSGEPIRALIQ 621

Query: 2031 DHIVSAVLLTKKDTFLTWEEYNHLLYSSGVSAAARDFFSSKPGQKVSVINSEAEIEPILP 2210
            DHI+SAVLLTKKDTFL ++E++ LLYSSG+S +     S KPGQK+  ++ +AE+ P+LP
Sbjct: 622  DHIISAVLLTKKDTFLNFDEFSQLLYSSGISTSKACASSEKPGQKIFTLDFDAEMLPVLP 681

Query: 2211 AILKPVPMWTGKQVITSLLNHISRTRGFEPLTVEKSGKIKKEYF---------------- 2342
            A+ KP P+WTGKQV+T+LL+HI  T+G  P  VEK  KI + +F                
Sbjct: 682  AVWKPEPLWTGKQVVTALLDHI--TQGSPPFFVEKDVKIPRGFFKCRDMGNNSSKKKEHT 739

Query: 2343 ------GRKSDEANLLIQKNELVHGVIDKAQFGEYGLVHTVQEFYGSDTAGILLSVLSRL 2504
                    + D+ +LLI KNELV GVIDKAQFG+YGLVHTVQE YGS+TAG+LLSV+SRL
Sbjct: 740  KVDKLKAARLDDDSLLIFKNELVRGVIDKAQFGDYGLVHTVQELYGSNTAGLLLSVMSRL 799

Query: 2505 FTVFLQMHGFTCGVDDLLIVQELDMERMKKLQRSDKIGEEQHAKFIGAKEGD-IDQMELQ 2681
            FTVFLQ HGFTCGVDDLL+++ +D ER K+LQ  +KIGE+ H  F+  K+G+ +D M LQ
Sbjct: 800  FTVFLQTHGFTCGVDDLLLIECMDKEREKQLQICEKIGEQVHLGFLKVKDGEKLDPMTLQ 859

Query: 2682 VEIEKAIRIKGESAITQLDRMMSSELNDLT--SVVNSELFPKGLLKPFPKNCLSLMTTSG 2855
            + IEK I   GE+A+T LDR M+S+LN+ T  S V  +L  +GLLKP  KNC+SLMTTSG
Sbjct: 860  LNIEKTISYNGEAALTSLDRKMTSQLNERTGNSKVLKDLLSEGLLKPSVKNCISLMTTSG 919

Query: 2856 AKGSLVNFTQISSLLGQQQLEGKRVPRMVSGKTLPCFPPWDPASRAGGFITDRFLTGLRP 3035
            AKG   NF QISS LGQQQLEGKRVPRMVSGKTLPCFPPWD ASRAGGFI DRFLTGLRP
Sbjct: 920  AKGGTANFQQISSHLGQQQLEGKRVPRMVSGKTLPCFPPWDWASRAGGFIVDRFLTGLRP 979

Query: 3036 QEYYFHCMAGREGLVDTAVKTSRSGYLQRCLVKSLECLKVCYDHTVRDADGSVVQFCYGE 3215
            QEYYFHCMAGREGLVDTAVKTSRSGYLQRCL+K+LE LK+CYDHTVRDADGSV+QF YGE
Sbjct: 980  QEYYFHCMAGREGLVDTAVKTSRSGYLQRCLIKNLESLKICYDHTVRDADGSVIQFQYGE 1039

Query: 3216 DGVDVHKTSFVTKFDTLAANQRVLERLGDHFEDAQMKSDDYIKELPEALEQKTKDFLSNL 3395
            DGVDVHKT+F+TKF+ LAANQ +L     H      K + +I ELP AL +K +   ++L
Sbjct: 1040 DGVDVHKTAFITKFEALAANQDMLYENSHH---QLGKYNVFINELPSALREKGEFIYNSL 1096

Query: 3396 TKQQRHSLHLRKRKDFXXXXXXXXXXXXAQPGEPVGVIAAQSVGQPSTQMTLNTFHHAGL 3575
            +K +   L L  ++DF            AQPGEPVGV+AAQS+G+PSTQMTLNTFHH G 
Sbjct: 1097 SKDKVPGLVL--KEDFIRLLENKYLSSLAQPGEPVGVLAAQSIGEPSTQMTLNTFHHVGR 1154

Query: 3576 GAMNVTLGIPRLQEILMRASETIQTPVMTCPLLMGKTWDDAKRLAATLKKVSVADIVESI 3755
            G MNVTLGI RLQEILM AS+ I+TP+MTCPL  G + D AK LA  LKK++VADI+ES+
Sbjct: 1155 GEMNVTLGILRLQEILMTASQDIKTPIMTCPLKEGYSMDVAKGLANKLKKITVADIIESM 1214

Query: 3756 EVCVVPFSVKKHQVSSIYKLKMKLYRPELYPPFSDITLEDCLKTMEVLFVGELEEEIQAH 3935
             V VVPFS +K ++ SIYKL++  Y  E       I+ ED   T+E +F+ ELE  I+  
Sbjct: 1215 NVTVVPFSQRKREICSIYKLRIDFYPLENNAQHGHISPEDLENTLETVFLEELEGLIERE 1274

Query: 3936 LIMLSKISGIKNIVLSAQSGSSKDIDEGDTGSKSQQVGEENDENAGD 4076
            +++LSKI+GIKN V  +Q   SK   EGD  S S+Q   ++D++ G+
Sbjct: 1275 MVLLSKINGIKNFVPDSQ---SKGSSEGDEVSSSRQKENDDDDDEGN 1318


>ref|XP_004165748.1| PREDICTED: LOW QUALITY PROTEIN: DNA-directed RNA polymerase I subunit
            RPA1-like [Cucumis sativus]
          Length = 1652

 Score = 1545 bits (3999), Expect = 0.0
 Identities = 828/1358 (60%), Positives = 986/1358 (72%), Gaps = 27/1358 (1%)
 Frame = +3

Query: 84   GATESVEAVGFSFLTNEEVRTLSFKKITNPILLDNLGRPAPDGLYDPAMGPLEDRTLCKS 263
            GA+ESV+ V FSF+TNEEVR  S  K+T PILLD +GRP   GLYDPAMG L++ TLCKS
Sbjct: 13   GASESVKVVTFSFMTNEEVRKQSVVKVTAPILLDGMGRPVSGGLYDPAMGSLDETTLCKS 72

Query: 264  CGQRSFQCPGHCGHIDLVSPIYNPLLFRILFNLLQRTCFFCYHFRVNREQVKKCALQLEL 443
            CGQR F CPGHCGHIDLVSP+YNPLLF IL N L+ TCF C+HFR     V+ C   LEL
Sbjct: 73   CGQRPFYCPGHCGHIDLVSPVYNPLLFVILHNFLRCTCFSCHHFRAGESMVENCKTLLEL 132

Query: 444  IIKGDIVGAKXXXXXXXXXXXXXXXXXRVHVKGLPRQVPNYNSKNLKQHSWTSLQYSEAM 623
            I+ G+I  AK                  ++          Y  KN +  +WTSLQ+SEA+
Sbjct: 133  ILDGEIAKAKELEEEWMNSKSRTKSSHSMYT---------YERKNGQPETWTSLQFSEAI 183

Query: 624  SLLDELMTGQKTECKRCGAKNPKITCPNFGWFHVN-MPNKYTRANIIKGSKLNKLSMGKA 800
            S++ + +  +++ CK CGAK+PKIT P FGWFH+  +     RAN I+ SK   +S G A
Sbjct: 184  SVVTKFLKPKQSNCKYCGAKSPKITKPTFGWFHMKGLAGVQKRANAIRRSKPVSVSSG-A 242

Query: 801  KRNSTGEEENANDSSAMGDVDSTDAESSGVVYDGTPDSAQKVKGGYLYPEFLKQKEFFSG 980
            +  S+ EEE   +++     D +                         PE   QK F SG
Sbjct: 243  EGVSSLEEETTTEATVEDFEDVS-------------------------PEVFMQKNFSSG 277

Query: 981  PLLPSEVKNHMKLLWENETQLCSLICDIQQERLSISGMKGNYSMFFIEALLVPPIKFRPP 1160
             LLPSEVK+ +K LW+NE  LCS I DI Q+     G K  +SMFF+E++LVPPIKFRPP
Sbjct: 278  HLLPSEVKDILKRLWKNEALLCSFISDISQQG---HGNKAGHSMFFLESVLVPPIKFRPP 334

Query: 1161 SKGGDSVMEHPQTVLLNKVMYSNISLCNEHMNSSERSKIVPRWFDLQQSINVLFGNSKTA 1340
            +KGGDSVMEHPQTVLLNKV+ SNISL N H N SE SKIV  W DLQQSIN+LF +   A
Sbjct: 335  AKGGDSVMEHPQTVLLNKVLQSNISLGNGHANKSEHSKIVRLWMDLQQSINILFDSKSAA 394

Query: 1341 GLRENMAT-GICQLLEKKEGIFRQKMMGKRVNYACRSVISPDPYLAVNEIGIPPYFALRL 1517
            G  +N A+ GICQLLEKKEG+FRQKMMGKRVN+ACRSVISPDPYLAVNEIGIPPYFALRL
Sbjct: 395  GPGKNDASLGICQLLEKKEGMFRQKMMGKRVNFACRSVISPDPYLAVNEIGIPPYFALRL 454

Query: 1518 TYPERVTPWNVNKLRDAIINGAEVHPGATHYVDKLATVKL--PPNRKIRTSISRKLHSSR 1691
            TYPERVT WNV KLR+AIING E HPGATHY+DKLATVKL   P+RK R SISRKL SSR
Sbjct: 455  TYPERVTAWNVQKLRNAIINGPETHPGATHYIDKLATVKLNLKPSRKSRISISRKLPSSR 514

Query: 1692 GVVAQPGKNLEHELEGKVVYRHLQDGDIVLVNRQPTLHKPSIMAHVVRVLSGEKTLRMHY 1871
            GVV   G + ++E EGK+V RHLQDGDIVLVNRQPTLHKPSIMAHVVRVL GEKT+RMHY
Sbjct: 515  GVVVDQGCD-DYEFEGKIVNRHLQDGDIVLVNRQPTLHKPSIMAHVVRVLKGEKTIRMHY 573

Query: 1872 ANCS-TYNADFDGDEMNVHFPQDEISRAEAFNIVNANNQYILPTSGEPTRGLIQDHIVSA 2048
            ANCS TYNADFDGDEMNVHFPQDEISRAEA+NIVNANNQY+ PTSGEP R LIQDHI+SA
Sbjct: 574  ANCSITYNADFDGDEMNVHFPQDEISRAEAYNIVNANNQYVKPTSGEPIRALIQDHIISA 633

Query: 2049 VLLTKKDTFLTWEEYNHLLYSSGVSAAARDFFSSKPGQKVSVINSEAEIEPILPAILKPV 2228
            VLLTKKDTFL ++E++ LLYSSG+S +     S KPGQK+  ++ +AE+ P+LPA+ KP 
Sbjct: 634  VLLTKKDTFLNFDEFSQLLYSSGISTSKACASSEKPGQKIFTLDFDAEMLPVLPAVWKPE 693

Query: 2229 PMWTGKQVITSLLNHISRTRGFEPLTVEKSGKI-------------KKEYF------GRK 2351
            P+WTGKQV+T+LL+HI  T+G  P  VEK  KI             KKE+         +
Sbjct: 694  PLWTGKQVVTALLDHI--TQGSPPFFVEKDVKIPRGFLILDEGNSKKKEHTKVDKLKAAR 751

Query: 2352 SDEANLLIQKNELVHGVIDKAQFGEYGLVHTVQEFYGSDTAGILLSVLSRLFTVFLQMHG 2531
             D+ +LLI KNELV GVIDKAQFG+YGLVHTVQE YGS+TAG+LLSV+SRLFTVFLQ HG
Sbjct: 752  LDDDSLLIFKNELVRGVIDKAQFGDYGLVHTVQELYGSNTAGLLLSVMSRLFTVFLQTHG 811

Query: 2532 FTCGVDDLLIVQELDMERMKKLQRSDKIGEEQHAKFIGAKEGD-IDQMELQVEIEKAIRI 2708
            FTCGVDDLL+++ +D ER K+LQ  +KIGE+ H  F+  K+G+ +D M LQ+ IEK I  
Sbjct: 812  FTCGVDDLLLIECMDKEREKQLQICEKIGEQVHLGFLKVKDGEKLDPMTLQLNIEKTISY 871

Query: 2709 KGESAITQLDRMMSSELNDLT--SVVNSELFPKGLLKPFPKNCLSLMTTSGAKGSLVNFT 2882
             GE+A+T LDR M+S+LN+ T  S V  +L  +GLLKP  KNC+SLMTTSGAKG   NF 
Sbjct: 872  NGEAALTSLDRKMTSQLNERTGNSKVLKDLLSEGLLKPSVKNCISLMTTSGAKGGTANFQ 931

Query: 2883 QISSLLGQQQLEGKRVPRMVSGKTLPCFPPWDPASRAGGFITDRFLTGLRPQEYYFHCMA 3062
            QISS LGQQQLEGKRVPRMVSGKTLPCFPPWD ASRAGGFI DRFLTGLRPQEYYFHCMA
Sbjct: 932  QISSHLGQQQLEGKRVPRMVSGKTLPCFPPWDWASRAGGFIVDRFLTGLRPQEYYFHCMA 991

Query: 3063 GREGLVDTAVKTSRSGYLQRCLVKSLECLKVCYDHTVRDADGSVVQFCYGEDGVDVHKTS 3242
            GREGLVDTAVKTSRSGYLQRCL+K+LE LK+CYDHTVRDADGSV+QF YGEDGVDVHKT+
Sbjct: 992  GREGLVDTAVKTSRSGYLQRCLIKNLESLKICYDHTVRDADGSVIQFQYGEDGVDVHKTA 1051

Query: 3243 FVTKFDTLAANQRVLERLGDHFEDAQMKSDDYIKELPEALEQKTKDFLSNLTKQQRHSLH 3422
            F+TKF+ LAANQ +L     H      K + +I ELP AL +K +   ++L+K +   L 
Sbjct: 1052 FITKFEALAANQDMLYENSHH---QLGKYNVFINELPSALREKGEFIYNSLSKDKVPGLV 1108

Query: 3423 LRKRKDFXXXXXXXXXXXXAQPGEPVGVIAAQSVGQPSTQMTLNTFHHAGLGAMNVTLGI 3602
            L  ++DF            AQPGEPVGV+AAQS+G+PSTQMTLNTFHHAG G MNVTLGI
Sbjct: 1109 L--KEDFIRLLENKYLSSLAQPGEPVGVLAAQSIGEPSTQMTLNTFHHAGRGEMNVTLGI 1166

Query: 3603 PRLQEILMRASETIQTPVMTCPLLMGKTWDDAKRLAATLKKVSVADIVESIEVCVVPFSV 3782
            PRLQEILM AS+ I+TP+MTCPL  G + D AK LA  LKK++VADI+ES+ V VVPFS 
Sbjct: 1167 PRLQEILMTASQDIKTPIMTCPLKEGYSMDVAKGLANKLKKITVADIIESMNVTVVPFSQ 1226

Query: 3783 KKHQVSSIYKLKMKLYRPELYPPFSDITLEDCLKTMEVLFVGELEEEIQAHLIMLSKISG 3962
            +K ++ SIYKL++  Y  E       I+ ED   T+E +F+ ELE  I+  +++LSKI+G
Sbjct: 1227 RKREICSIYKLRIDFYPLENNAQHGHISPEDLENTLETVFLEELEGLIEREMVLLSKING 1286

Query: 3963 IKNIVLSAQSGSSKDIDEGDTGSKSQQVGEENDENAGD 4076
            IK  V  +Q   SK   EGD  S S+Q   ++D+   D
Sbjct: 1287 IKXFVPDSQ---SKGSSEGDEVSSSRQEEMDDDDEGND 1321


>ref|XP_006588921.1| PREDICTED: DNA-directed RNA polymerase I subunit rpa1-like [Glycine
            max]
          Length = 1651

 Score = 1539 bits (3984), Expect = 0.0
 Identities = 813/1358 (59%), Positives = 988/1358 (72%), Gaps = 21/1358 (1%)
 Frame = +3

Query: 66   MAYTTEGATESVEAVGFSFLTNEEVRTLSFKKITNPILLDNLGRPAPDGLYDPAMGPLED 245
            M  TTEGAT SVEAV FSFLT++E+R  S  KIT+PIL+D L  P PDGLYD A+GP +D
Sbjct: 1    MVLTTEGATNSVEAVAFSFLTDDEIRRSSRVKITSPILVDFLLHPVPDGLYDAALGPFDD 60

Query: 246  RTLCKSCGQRSFQCPGHCGHIDLVSPIYNPLLFRILFNLLQRTCFFCYHFRVNREQVKKC 425
            ++LCKSCGQ S  CPGH GHI+LVSP+YNPL+F IL N+LQRTCF C+HFR   ++V   
Sbjct: 61   KSLCKSCGQTSKHCPGHFGHIELVSPVYNPLMFNILSNILQRTCFTCHHFRAPSKEVDIR 120

Query: 426  ALQLELIIKGDIVGAKXXXXXXXXXXXXXXXXXRVHVKGLPRQVPNYNSKNLKQHSWTSL 605
              QLELI+KGDI+ AK                      G   +   Y+++ L ++ WTSL
Sbjct: 121  TSQLELIMKGDIIRAKRLESIIPGKSVDSFNPDESIHPGDGDESQCYSAEQLGEN-WTSL 179

Query: 606  QYSEAMSLLDELMTGQKTECKRCGAKNPKITCPNFGWFHVNMPNK-YTRANIIKGSKLNK 782
            Q+SEAMS+L +L+T +  +C++CGAKNPKI+ P FGWFH+N+ +   TRA+ I+      
Sbjct: 180  QFSEAMSVLRKLLTKKHKKCQKCGAKNPKISKPTFGWFHMNVLSADETRADTIRSV---- 235

Query: 783  LSMGKAKRNSTGEEENANDSSAMGDVDSTDAESSGVVYDGTPDSAQKVKGGYLYPEFLKQ 962
                        E E  ND  ++G  D+TD E          D  +K K  Y     L +
Sbjct: 236  ------------ESETTNDDISLGGGDTTDVEDITSAGTAKRDKRKKEKLSYK----LAE 279

Query: 963  KEFFSGPLLPSEVKNHMKLLWENETQLCSLICDIQQERLSISGMKGNYSMFFIEALLVPP 1142
            +   SG LLPS+VK  ++LLWENE +LCS I DIQ +     G K  +SMFF+E + VPP
Sbjct: 280  QNKLSGSLLPSQVKGILELLWENEARLCSYINDIQDQGF---GKKAGHSMFFLENIFVPP 336

Query: 1143 IKFRPPSKGGDSVMEHPQTVLLNKVMYSNISLCNEHMNSSERSKIVPRWFDLQQSINVLF 1322
            IKFRPP+KGGD+VMEHPQTVLL KV+  NISL + H+N S+ SK++ RW DLQQS+N+LF
Sbjct: 337  IKFRPPTKGGDNVMEHPQTVLLTKVLQCNISLGDAHLNKSDPSKVLSRWMDLQQSVNMLF 396

Query: 1323 GNSKTAGLRENMATGICQLLEKKEGIFRQKMMGKRVNYACRSVISPDPYLAVNEIGIPPY 1502
             N KTA  + ++ATGICQLLEKKEGIFRQKMMGKRVN+ACRSVISPDPYLAVNEIGIPPY
Sbjct: 397  DN-KTASGKRDVATGICQLLEKKEGIFRQKMMGKRVNFACRSVISPDPYLAVNEIGIPPY 455

Query: 1503 FALRLTYPERVTPWNVNKLRDAIINGAEVHPGATHYVDKLATVKLPPNRKIRTSISRKLH 1682
            FALRL+YPERVTPWNV KLR+AI+NG E HPGATHY DK++ VKLPP  K+ +  SRKL 
Sbjct: 456  FALRLSYPERVTPWNVVKLRNAILNGPESHPGATHYADKVSIVKLPPKGKLLSLTSRKLP 515

Query: 1683 SSRGVVAQPGKNLEHELEGKVVYRHLQDGDIVLVNRQPTLHKPSIMAHVVRVLSGEKTLR 1862
            +SRGV+   GK  +HE EGKVVYRHL+DGD+VLVNRQPTLHKPSIMAH+VRVL GEKT+R
Sbjct: 516  TSRGVILHQGKISDHEFEGKVVYRHLKDGDVVLVNRQPTLHKPSIMAHIVRVLKGEKTVR 575

Query: 1863 MHYANCSTYNADFDGDEMNVHFPQDEISRAEAFNIVNANNQYILPTSGEPTRGLIQDHIV 2042
            MHYANCSTYNADFDGDE+NVHFPQDEISRAEA+NIVNANNQY+ PTSG+P R LIQDHIV
Sbjct: 576  MHYANCSTYNADFDGDEINVHFPQDEISRAEAYNIVNANNQYVKPTSGDPIRALIQDHIV 635

Query: 2043 SAVLLTKKDTFLTWEEYNHLLYSSGVSAAARDFFSSKPGQKVSVINSEAEIEPILPAILK 2222
            SA LLTKKDTFL++EE+N LLYSSGVS A    F  K GQKV + NSE+E+    PAI K
Sbjct: 636  SAALLTKKDTFLSYEEFNQLLYSSGVSMAGLGSFYGKHGQKVFISNSESEMFLFPPAIWK 695

Query: 2223 PVPMWTGKQVITSLLNHISRTRGFEPLTVEKSGKIKKEYFGR-----------------K 2351
            P P+WTGKQVI++LL +I  TRG  P T EK+ KI   +F                   K
Sbjct: 696  PEPLWTGKQVISALLYYI--TRGSPPFTAEKNAKIPSNFFKTQIRKGKRYTEDTSKKKDK 753

Query: 2352 SDEANLLIQKNELVHGVIDKAQFGEYGLVHTVQEFYGSDTAGILLSVLSRLFTVFLQMHG 2531
             DE  LLI KN+LV GV+DKAQFG+YG++HTVQE YGS+ AG LLS LSRLFT FLQMHG
Sbjct: 754  PDEDKLLIYKNDLVRGVVDKAQFGDYGMIHTVQELYGSNVAGNLLSALSRLFTTFLQMHG 813

Query: 2532 FTCGVDDLLIVQELDMERMKKLQRSDKIGEEQHAKFIGAKEGD-IDQMELQVEIEKAIRI 2708
            FTCGVDDL++ +  D+ERM +L+  + IG+  H +FIG K  D ID + LQ+ IEK IR 
Sbjct: 814  FTCGVDDLMLTEGKDVERMNQLKSCEIIGDSVHREFIGVKNSDNIDPVTLQLNIEKKIRS 873

Query: 2709 KGESAITQLDRMMSSELNDLTSV-VNSELFPKGLLKPFPKNCLSLMTTSGAKGSLVNFTQ 2885
             GE+A+T LDR M+S LN  TS  +  +L  +G+LKP  KNC+SLMTTSGAKGS+VNF Q
Sbjct: 874  NGEAALT-LDRKMTSNLNSRTSSGILKKLLSEGILKPSGKNCISLMTTSGAKGSMVNFQQ 932

Query: 2886 ISSLLGQQQLEGKRVPRMVSGKTLPCFPPWDPASRAGGFITDRFLTGLRPQEYYFHCMAG 3065
            ISS LGQQ+LEGKRVPRMVSGKTLPCFPPWD + RAGGFI DRFLT L PQEYYFHCMAG
Sbjct: 933  ISSHLGQQELEGKRVPRMVSGKTLPCFPPWDCSPRAGGFIIDRFLTALHPQEYYFHCMAG 992

Query: 3066 REGLVDTAVKTSRSGYLQRCLVKSLECLKVCYDHTVRDADGSVVQFCYGEDGVDVHKTSF 3245
            REGLVDTAVKTSRSGYLQRCL+K+LECLKVCYDHTVRDADGS++QF YGEDGVDVH+TSF
Sbjct: 993  REGLVDTAVKTSRSGYLQRCLMKNLECLKVCYDHTVRDADGSIIQFHYGEDGVDVHQTSF 1052

Query: 3246 VTKFDTLAANQRVLERLGDHFEDAQMKSDDYIKELPEALEQKTKDFLSNLTKQQRHSLHL 3425
            +T+F  L+ N+   E +  ++     +S  YI +LPEALE K + F       ++ +L  
Sbjct: 1053 ITEFGALSTNK---ELVFSNYCRQLDRSSPYINKLPEALEGKAEKF------SKQRNLGS 1103

Query: 3426 RKRKDFXXXXXXXXXXXXAQPGEPVGVIAAQSVGQPSTQMTLNTFHHAGLGAMNVTLGIP 3605
             ++ DF            AQPGEPVGV+A+QSVG+P+TQMTLNTFH AG G MNVTLGIP
Sbjct: 1104 MEQADFLRLMEHKYVSCLAQPGEPVGVLASQSVGEPATQMTLNTFHLAGRGEMNVTLGIP 1163

Query: 3606 RLQEILMRASETIQTPVMTCPLLMGKTWDDAKRLAATLKKVSVADIVESIEVCVVPFSVK 3785
            RLQEILM A+  I+TP MTCPL   K+  DA  LA  LKK++VADI++S++V VVP +V 
Sbjct: 1164 RLQEILMAAARDIKTPFMTCPLRHDKSMKDAICLADKLKKITVADIIKSMKVSVVPVTVL 1223

Query: 3786 KHQVSSIYKLKMKLYRPELYPPFSDITLEDCLKTMEVLFVGELEEEIQAHLIMLSKISGI 3965
              QV SIYKL MKLY+ + YP ++DITL+D  +T+ V FV ELE+ IQ H+ +LSKISGI
Sbjct: 1224 GGQVCSIYKLVMKLYKSKQYPEYTDITLDDWEETLRVNFVRELEDAIQNHMTLLSKISGI 1283

Query: 3966 KNIVLSAQSG-SSKDIDEGDTGSKSQQVGEENDENAGD 4076
            K      QS  S+   D    GS+S++ G+ ND++  D
Sbjct: 1284 KKFKTDPQSNYSNSSEDAHSNGSESEKKGQNNDDDDED 1321


>ref|XP_007145632.1| hypothetical protein PHAVU_007G255400g [Phaseolus vulgaris]
            gi|561018822|gb|ESW17626.1| hypothetical protein
            PHAVU_007G255400g [Phaseolus vulgaris]
          Length = 1637

 Score = 1506 bits (3899), Expect = 0.0
 Identities = 800/1360 (58%), Positives = 977/1360 (71%), Gaps = 23/1360 (1%)
 Frame = +3

Query: 66   MAYTTEGATESVEAVGFSFLTNEEVRTLSFKKITNPILLDNLGRPAPDGLYDPAMGPLED 245
            M   TEG T SV+AVGFSFLT++E+   S  KITNPILL+ L  P   GLYDPA+GPL+D
Sbjct: 1    MVLFTEGVTNSVKAVGFSFLTSDELLRSSRVKITNPILLNPLLNPVSGGLYDPALGPLDD 60

Query: 246  RTLCKSCGQRSFQCPGHCGHIDLVSPIYNPLLFRILFNLLQRTCFFCYHFRVNREQVKKC 425
            ++LCKSCGQ S  CPGH GHI+LVSP+YNPL+F IL ++LQRTCF C+HF  +R++V+  
Sbjct: 61   KSLCKSCGQGSKHCPGHFGHIELVSPVYNPLMFNILSSILQRTCFSCHHFHASRKEVEMR 120

Query: 426  ALQLELIIKGDIVGAKXXXXXXXXXXXXXXXXXRVHVKGLPRQVPNYNSKNLKQ--HSWT 599
              Q ELI+KGDI+ AK                                S+ ++Q   +W+
Sbjct: 121  TSQFELIMKGDIIRAKSLDSIISDESNHSGDGD--------------ESQGVEQLGENWS 166

Query: 600  SLQYSEAMSLLDELMTGQKTECKRCGAKNPKITCPNFGWFHVN-MPNKYTRANIIKGSKL 776
            SLQ+SEAMS+L + +  +  +C+ CG  NP+I+ P FGWFH+N + +   RAN ++    
Sbjct: 167  SLQFSEAMSVLRKFLLRKYKKCQNCGVVNPRISKPTFGWFHMNVLSDDEARANTMRAL-- 224

Query: 777  NKLSMGKAKRNSTGEEENANDSSAMGDVDSTDAESSGVVYDGTPDSAQKVKGGYLYPEFL 956
                          E E  ND  ++G  ++T+ E   +   GT     K K G L  +  
Sbjct: 225  --------------ESETINDDMSLGGGETTEEED--ITSTGTA-KRDKRKKGKLSSKLA 267

Query: 957  KQKEFFSGPLLPSEVKNHMKLLWENETQLCSLICDIQQERLSISGMKGNYSMFFIEALLV 1136
             Q +  SG LLPS+VK  ++LLWENE +LCS I DIQ +     G K  +SMFF+E + V
Sbjct: 268  AQNK-LSGSLLPSQVKGILELLWENEARLCSYISDIQDQGF---GKKAGHSMFFLENIFV 323

Query: 1137 PPIKFRPPSKGGDSVMEHPQTVLLNKVMYSNISLCNEHMNSSERSKIVPRWFDLQQSINV 1316
            PPIKFRPP+KGGD VMEHPQTVLL KV+  NISL + H+N  + SK++ RW DLQQS+N+
Sbjct: 324  PPIKFRPPTKGGDDVMEHPQTVLLTKVLQGNISLGDAHINKLDPSKVLSRWMDLQQSVNL 383

Query: 1317 LFGNSKTAGLRENMATGICQLLEKKEGIFRQKMMGKRVNYACRSVISPDPYLAVNEIGIP 1496
            LF N KT+G  E +A GICQLLEKKEGIFRQKMMGKRVN+ACRSVISPDPYLAVNEIGIP
Sbjct: 384  LFDN-KTSGQGE-VAAGICQLLEKKEGIFRQKMMGKRVNFACRSVISPDPYLAVNEIGIP 441

Query: 1497 PYFALRLTYPERVTPWNVNKLRDAIINGAEVHPGATHYVDKLATVKLPPNRKIRTSISRK 1676
            PYFALRL+YPERVTPWNV  LR+AI+NG + HPGATHY D+ ATVKLPPN K+ + ISRK
Sbjct: 442  PYFALRLSYPERVTPWNVTMLRNAILNGPQSHPGATHYTDQQATVKLPPNGKLLSFISRK 501

Query: 1677 LHSSRGVVAQPGKNLEHELEGKVVYRHLQDGDIVLVNRQPTLHKPSIMAHVVRVLSGEKT 1856
            L SSRGV+   GK  + E EGK+VYRHL+DGD+VLVNRQPTLHKPSIMAHVVRVL GEKT
Sbjct: 502  LPSSRGVILDHGKISDQEFEGKIVYRHLKDGDVVLVNRQPTLHKPSIMAHVVRVLKGEKT 561

Query: 1857 LRMHYANCSTYNADFDGDEMNVHFPQDEISRAEAFNIVNANNQYILPTSGEPTRGLIQDH 2036
            +RMHYANCSTYNADFDGDE+NVHFPQDEISRAEA+NIVNANNQY+ PTSG+P R LIQDH
Sbjct: 562  VRMHYANCSTYNADFDGDEINVHFPQDEISRAEAYNIVNANNQYVKPTSGDPIRALIQDH 621

Query: 2037 IVSAVLLTKKDTFLTWEEYNHLLYSSGVSAAARDFFSSKPGQKVSVINSEAEIEPILPAI 2216
            IVSA LLTKKDTF+T+E +  LLYSSGVS      FS K GQKV + NSE E+    PAI
Sbjct: 622  IVSAALLTKKDTFITYEVFIQLLYSSGVSMTGLGSFSGKHGQKVFMTNSEFEMFLFPPAI 681

Query: 2217 LKPVPMWTGKQVITSLLNHISRTRGFEPLTVEKSGKIKKEYF------GRK--------- 2351
             KP P+WTGKQVI++LL +I  TR   P TVEK+ KI   +F      G++         
Sbjct: 682  WKPEPLWTGKQVISALLYYI--TRDSPPFTVEKNAKIPSNFFKTQVRDGKRHTRDKSRNK 739

Query: 2352 ---SDEANLLIQKNELVHGVIDKAQFGEYGLVHTVQEFYGSDTAGILLSVLSRLFTVFLQ 2522
                DE  LLI KN+LV GV+DKAQFG+YG++HTVQE YGS  AG LLS LSRLFT FLQ
Sbjct: 740  VEPDDEDKLLIYKNDLVRGVVDKAQFGDYGIIHTVQELYGSKVAGNLLSALSRLFTTFLQ 799

Query: 2523 MHGFTCGVDDLLIVQELDMERMKKLQRSDKIGEEQHAKFIGAKEGD-IDQMELQVEIEKA 2699
            MHGFTCGVDDL+I +E D+ERM +L+  ++IG+  H +FIG    D ID + LQ+ IEK 
Sbjct: 800  MHGFTCGVDDLMITEEKDVERMDQLRSCEEIGDIVHREFIGVMNSDIIDPITLQLNIEKK 859

Query: 2700 IRIKGESAITQLDRMMSSELNDLTSV-VNSELFPKGLLKPFPKNCLSLMTTSGAKGSLVN 2876
            IR  GE+A+T LDR M+S LN  TS  +  +L   G+LKP  KNC+SLMTTSGAKGS+VN
Sbjct: 860  IRSNGEAALTYLDRKMTSNLNSRTSSGILKDLLSDGILKPSGKNCISLMTTSGAKGSMVN 919

Query: 2877 FTQISSLLGQQQLEGKRVPRMVSGKTLPCFPPWDPASRAGGFITDRFLTGLRPQEYYFHC 3056
            F QISS LGQQ+LEGKRVPRMVSGKTLPCF PWD + RAGGFI DRFLTGL PQEYYFHC
Sbjct: 920  FQQISSHLGQQELEGKRVPRMVSGKTLPCFAPWDCSPRAGGFIIDRFLTGLHPQEYYFHC 979

Query: 3057 MAGREGLVDTAVKTSRSGYLQRCLVKSLECLKVCYDHTVRDADGSVVQFCYGEDGVDVHK 3236
            MAGREGLVDTAVKTSRSGYLQRCL+K+LECLKVCYDHTVRDADGS++QF YGEDGVDVH 
Sbjct: 980  MAGREGLVDTAVKTSRSGYLQRCLMKNLECLKVCYDHTVRDADGSIIQFHYGEDGVDVHH 1039

Query: 3237 TSFVTKFDTLAANQRVLERLGDHFEDAQMKSDDYIKELPEALEQKTKDFLSNLTKQQRHS 3416
            TSF+ KF+ L+ N+ ++   G+       +S  YI +LP+AL++K ++F  +  KQ+  +
Sbjct: 1040 TSFINKFEALSTNKELV--YGNCCRQLD-RSSPYINKLPDALKEKAENFFRDSLKQR--N 1094

Query: 3417 LHLRKRKDFXXXXXXXXXXXXAQPGEPVGVIAAQSVGQPSTQMTLNTFHHAGLGAMNVTL 3596
            L   KR +F            AQPGE VGV+A+QSVG+P+TQMTLNTFH AG G MNVTL
Sbjct: 1095 LGSLKRAEFLKLMEHKYVSCLAQPGESVGVLASQSVGEPATQMTLNTFHLAGRGEMNVTL 1154

Query: 3597 GIPRLQEILMRASETIQTPVMTCPLLMGKTWDDAKRLAATLKKVSVADIVESIEVCVVPF 3776
            GIPRLQEI+M A+  I+TP MTCPL   K+ ++A  LA  LKK++VADI++S++V VVP 
Sbjct: 1155 GIPRLQEIVMAAARDIKTPFMTCPLRSNKSMEEAICLADKLKKITVADIIKSMKVSVVPV 1214

Query: 3777 SVKKHQVSSIYKLKMKLYRPELYPPFSDITLEDCLKTMEVLFVGELEEEIQAHLIMLSKI 3956
            SV   QV SIYKL MKLY+P+ YP +SDITLED   T+ + FV ELE+ I+ H+ +LSKI
Sbjct: 1215 SVLGGQVCSIYKLVMKLYKPKQYPKYSDITLEDWEDTLRISFVRELEDAIENHMALLSKI 1274

Query: 3957 SGIKNIVLSAQSGSSKDIDEGDTGSKSQQVGEENDENAGD 4076
            SGIK      QS S+   D    GS+S+  G+ ND++  D
Sbjct: 1275 SGIKKFKTDPQSHSNSSEDAHGNGSESETKGKSNDDDDDD 1314


>ref|XP_006351332.1| PREDICTED: DNA-directed RNA polymerase I subunit rpa1-like [Solanum
            tuberosum]
          Length = 1675

 Score = 1483 bits (3839), Expect = 0.0
 Identities = 772/1366 (56%), Positives = 980/1366 (71%), Gaps = 34/1366 (2%)
 Frame = +3

Query: 81   EGATESVEAVGFSFLTNEEVRTLSFKKITNPILLDNLGRPAPDGLYDPAMGPLEDRTLCK 260
            +GA+E+VEAV FSF+T+EEVR  S  K+T+P LLD L  P P+GLYDPAMGPL+  + CK
Sbjct: 3    QGASEAVEAVHFSFMTDEEVRRHSVVKVTSPNLLDGLQLPVPNGLYDPAMGPLDHYSQCK 62

Query: 261  SCGQRSFQCPGHCGHIDLVSPIYNPLLFRILFNLLQRTCFFCYHFRVNREQVKKCALQLE 440
             C Q +  C GHCGHI+LVSP+YNPLLF +L NLLQRTCF+C+HFR +R +V+KC  +LE
Sbjct: 63   FCCQSN--CSGHCGHIELVSPVYNPLLFNMLHNLLQRTCFYCFHFRASRAEVEKCVSELE 120

Query: 441  LIIKGDIVGAKXXXXXXXXXXXXXXXXXRVHVKGLPRQVPNYNSKNL-KQHSWTSLQYSE 617
            LI KGD+VGAK                   H+      +   + +   K+ SW + Q++E
Sbjct: 121  LIAKGDVVGAKMIDALSPDNSTDREESEGSHMSCAMDDLNMQDHREYNKRPSWDNFQFTE 180

Query: 618  AMSLLDELMTGQKTECKRCGAKNPKITCPNFGWFHVNMPNKYTRANIIK-GSKLNKLSMG 794
            AM+++D ++  +  +C  C AKNPKI  P+FG FH+++ NK  R N I  G + N    G
Sbjct: 181  AMAVIDRILKTKTEKCSNCKAKNPKIRKPSFGRFHMDISNKQIRENYINSGRRFNLHDTG 240

Query: 795  KAKRNSTGEEENANDSSAMGDVDSTDAESSGVVYDGTPDS-AQKVKGGYLYPEFLKQKEF 971
             ++ N + E  NA +   +G+ +++   +S    DG  +S A+K +GG       +QK+ 
Sbjct: 241  GSEENPSPEVVNATEP--LGEAETSLCVTST---DGVENSKARKRQGGDQSDVVEQQKDS 295

Query: 972  FSGPLLPSEVKNHMKLLWENETQLCSLICDIQQERLSISGMKGNYSMFFIEALLVPPIKF 1151
            FS   LPS+V++ ++ LWENE  LC+  CDIQ +  + SG     SMFF++++LVPPIKF
Sbjct: 296  FSVAHLPSQVRSIIEHLWENEAPLCTFFCDIQSQHHNTSGKVAGPSMFFLDSILVPPIKF 355

Query: 1152 RPPSKGGDSVMEHPQTVLLNKVMYSNISLCNEHMNSSERSKIVPRWFDLQQSINVLFGNS 1331
            RPP+KGGDS+MEHP TVLL KV+ +NI+L N H+N + RSKI+ R  DLQQS+NVLF + 
Sbjct: 356  RPPAKGGDSIMEHPHTVLLGKVVQANIALGNAHINRAGRSKIISRLMDLQQSVNVLFDSK 415

Query: 1332 KTAGL-RENMATGICQLLEKKEGIFRQKMMGKRVNYACRSVISPDPYLAVNEIGIPPYFA 1508
              +G  ++++ +GICQ+LEKKEGIFRQKMMGKRVN+ACRSVISPDPYL+VNEIGIPPYFA
Sbjct: 416  TASGPGQKDVGSGICQMLEKKEGIFRQKMMGKRVNFACRSVISPDPYLSVNEIGIPPYFA 475

Query: 1509 LRLTYPERVTPWNVNKLRDAIINGAEVHPGATHYVDKLATVKLPPNRKIRTSISRKLHSS 1688
            LRLTYPER+TPWN  K+RDA+ING E HPGA  + D++ATVKLP N+K+R +ISRKL SS
Sbjct: 476  LRLTYPERLTPWNAVKMRDAVINGPENHPGAVSFADRIATVKLPSNKKMRVAISRKLPSS 535

Query: 1689 RGVVAQPGKNLEHELEGKVVYRHLQDGDIVLVNRQPTLHKPSIMAHVVRVLSGEKTLRMH 1868
            RG V Q G+N E+E EGKVVYRHLQDGD+VLVNRQPTLHKPSIMAHVVRVL GEKTLRMH
Sbjct: 536  RGAVTQSGRNNEYEFEGKVVYRHLQDGDVVLVNRQPTLHKPSIMAHVVRVLKGEKTLRMH 595

Query: 1869 YANCSTYNADFDGDEMNVHFPQDEISRAEAFNIVNANNQYILPTSGEPTRGLIQDHIVSA 2048
            YANCSTYNADFDGDEMNVHFPQDEISRAEA+NIVNAN QYI+PT G+  RGLIQDHIV A
Sbjct: 596  YANCSTYNADFDGDEMNVHFPQDEISRAEAYNIVNANEQYIVPTKGDTVRGLIQDHIVGA 655

Query: 2049 VLLTKKDTFLTWEEYNHLLYSSGVSAAARDFFSSKPGQKVSVINSEAEIEPILPAILKPV 2228
            V+LT K+TFLT  E+N LLY SGV AA     S     KVSV++ E  ++ +LPA+ KP 
Sbjct: 656  VILTMKNTFLTLHEFNQLLYGSGVFAAGPAPTSGNHSNKVSVVDFEGVVQTVLPAVWKPK 715

Query: 2229 PMWTGKQVITSLLNHISRTRGFEPLTVEKSGKIKKEYFGRKS---------------DEA 2363
            P+WTGKQVIT+LLNH+  T+G  P TV+  GKI   YF  +S                E 
Sbjct: 716  PLWTGKQVITALLNHL--TKGCAPCTVKNKGKIPYPYFLSESRLVEYQSREEQEDRTAEN 773

Query: 2364 NLLIQKNELVHGVIDKAQFGEYGLVHTVQEFYGSDTAGILLSVLSRLFTVFLQMHGFTCG 2543
              LI KNELV GVIDKAQFG++GLVHT+QE YGS+ AGILLS LSRLFT+FLQ+HGFTCG
Sbjct: 774  EFLIWKNELVRGVIDKAQFGKFGLVHTIQELYGSNKAGILLSALSRLFTIFLQLHGFTCG 833

Query: 2544 VDDLLIVQELDMERMKKLQRSDKIGEEQHAKFIGAKEGDIDQMELQVEIEKAIRIKGESA 2723
            VDDL+I+   D+ R ++L+  D +GEE H  F+  K G+I  +ELQ+EIEKA+    E+A
Sbjct: 834  VDDLVILPHYDIRRKEELE-GDDVGEEAHCDFVKFKRGEIGPLELQLEIEKAMSSNKEAA 892

Query: 2724 ITQLDRMMSSELNDLTSVVNSELFPKGLLKPFPKNCLSLMTTSGAKGSLVNFTQISSLLG 2903
               LD  M ++L +  S  N EL  KGLLKPFP+NC++LMT +GAKGS VNF QISS LG
Sbjct: 893  TAALDMKMKNKLANKGSQFNKELLLKGLLKPFPRNCIALMTITGAKGSTVNFQQISSYLG 952

Query: 2904 QQQLEGKRVPRMVSGKTLPCFPPWDPASRAGGFITDRFLTGLRPQEYYFHCMAGREGLVD 3083
            QQ+LEGKRVPRMVSGKTLPCFPPWD ASRAGG+++DRFL+GLRPQEYYFHCMAGREGLVD
Sbjct: 953  QQELEGKRVPRMVSGKTLPCFPPWDCASRAGGYVSDRFLSGLRPQEYYFHCMAGREGLVD 1012

Query: 3084 TAVKTSRSGYLQRCLVKSLECLKVCYDHTVRDADGSVVQFCYGEDGVDVHKTSFVTKFDT 3263
            TAVKTSRSGYLQRCL+K+LE LKVCYD+TVRDADGS++QF YGEDGVDVH+TSF+  F  
Sbjct: 1013 TAVKTSRSGYLQRCLIKNLESLKVCYDYTVRDADGSIIQFYYGEDGVDVHRTSFLKNFKA 1072

Query: 3264 LAANQRVLERLGDHFEDAQMKSDDYIKELPEALEQKTKDFLSNLTKQQRHSLHLRKRK-- 3437
            L  NQ  + +   H      K + YI++LP+ LE+K K F    TK+    L    +K  
Sbjct: 1073 LKNNQETICQKLRH----GRKLNSYIEKLPDGLEEKVKHFWEKRTKKLEKKLGKLVKKEE 1128

Query: 3438 ----------DFXXXXXXXXXXXXAQPGEPVGVIAAQSVGQPSTQMTLNTFHHAGLGAMN 3587
                      DF            A  GEPVGV+A QSVG+PSTQMTLNTFH AG G MN
Sbjct: 1129 MVKQLKEEEADFLELVRQKYFSSLADSGEPVGVLAGQSVGEPSTQMTLNTFHLAGRGEMN 1188

Query: 3588 VTLGIPRLQEILMRASETIQTPVMTCPLLMGKTWDDAKRLAATLKKVSVADIVESIEVCV 3767
            VTLGIPRLQEILM ASE I+TP++TCP L  ++ +DA+ L A +KK++VAD++ES+EV +
Sbjct: 1189 VTLGIPRLQEILMTASEAIKTPILTCPFLGWQSKNDAQSLLAKVKKITVADMIESMEVKL 1248

Query: 3768 VPFSVKKHQVSSIYKLKMKLYRPELYPPFSDITLEDCLKTMEVLFVGELEEEIQAHLIML 3947
            +P S+  HQVS +YKL +KL + +       ++ EDC  T++ +F+ ELE+ I++HL +L
Sbjct: 1249 LPLSIYNHQVSQLYKLTVKLKKHDF------VSSEDCEYTLKFVFLRELEDAIESHLALL 1302

Query: 3948 SKISGIKNIVLSAQSGSSKDIDEGDTGSKSQQV---GEENDENAGD 4076
            SKI+GI+N   S++S  S + +E  + ++ ++     E+ DE   D
Sbjct: 1303 SKINGIQNFKTSSESVDSDETEENASSTRHEEEMLDDEDEDERTED 1348


>ref|XP_004513648.1| PREDICTED: DNA-directed RNA polymerase I subunit rpa1-like [Cicer
            arietinum]
          Length = 1650

 Score = 1479 bits (3829), Expect = 0.0
 Identities = 788/1357 (58%), Positives = 975/1357 (71%), Gaps = 20/1357 (1%)
 Frame = +3

Query: 66   MAYTTEGATESVEAVGFSFLTNEEVRTLSFKKITNPILLDNLGRPAPDGLYDPAMGPLED 245
            MA  TEGAT SV+AV FSFLT+EE+   S  KITNPILLD L  P   GLYDPA+GP  +
Sbjct: 1    MALATEGATNSVKAVAFSFLTDEEILKSSRVKITNPILLDTLHSPVAGGLYDPALGPFHE 60

Query: 246  RTLCKSCGQRSFQCPGHCGHIDLVSPIYNPLLFRILFNLLQRTCFFCYHFRVNREQVKKC 425
            ++ C+SCGQ S+ CPGH GHI+LVSP+YNPL+F +L N+L+RTCF C+HF+ +R +V+  
Sbjct: 61   KSPCQSCGQNSYHCPGHFGHIELVSPVYNPLMFSMLSNVLRRTCFSCHHFQASRNEVELR 120

Query: 426  ALQLELIIKGDIVGAKXXXXXXXXXXXXXXXXXRVHVKGLPRQVPNYNSKNLKQHSWTSL 605
            A QLELI+KG+I  AK                      G   Q    +S      +WTSL
Sbjct: 121  ANQLELIMKGNIAKAKNLDAINLDESADLSD-------GNDSQC---SSDEQLGENWTSL 170

Query: 606  QYSEAMSLLDELMTGQKTECKRCGAKNPKITCPNFGWFHVN-MPNKYTRANIIKGSKLNK 782
            Q+SEAMS+L + +  +  +C+ CG  NPKIT P FGWFHV  +     RAN+I G   + 
Sbjct: 171  QFSEAMSVLRKFLKKEFRKCQNCGNINPKITKPTFGWFHVKALSAAQARANVISGIDASL 230

Query: 783  LSMGKAKRNSTGEEENANDSSAMGDVDSTDAESSGVVYDGTPDSAQKVKGGYLYPEFLKQ 962
             S            E  +D  ++G+ D+TD E   +    T +S  K +        L +
Sbjct: 231  AS------------EIIHDDISLGNGDTTDVED--ITSGDTANSNAKRQNK------LAR 270

Query: 963  KEFFSGPLLPSEVKNHMKLLWENETQLCSLICDIQQERLSISGMKGNYSMFFIEALLVPP 1142
                SG LLPS+V+  ++LLWENE +LC  I DIQ +     G K  +SMFF++ + VPP
Sbjct: 271  HNKLSGSLLPSQVQGILELLWENEARLCLYISDIQGQGF---GKKAGHSMFFLDNIYVPP 327

Query: 1143 IKFRPPSKGGDSVMEHPQTVLLNKVMYSNISLCNEHMNSSERSKIVPRWFDLQQSINVLF 1322
            IKFRPP+KG D V EH QTVLL +V+ SNISL   H+N S+ S ++ RW DLQ+S+N+LF
Sbjct: 328  IKFRPPTKGDDKVSEHAQTVLLTRVLESNISLGQAHLNKSDASVVLRRWMDLQRSVNLLF 387

Query: 1323 GNSKTAGLRENMATGICQLLEKKEGIFRQKMMGKRVNYACRSVISPDPYLAVNEIGIPPY 1502
             N KTA  ++++ TGICQLLEKKEGIFRQKMMGKRVNYACRSVISPDPYLAVNEIGIPPY
Sbjct: 388  DN-KTASGQKDLVTGICQLLEKKEGIFRQKMMGKRVNYACRSVISPDPYLAVNEIGIPPY 446

Query: 1503 FALRLTYPERVTPWNVNKLRDAIINGAEVHPGATHYVDKLATVKLPPNRKIRTSISRKLH 1682
            FALRLTYPERVTPWNV +LR+AI+NG E HPGAT Y DK +T+KLP +R+ R+  SRKL 
Sbjct: 447  FALRLTYPERVTPWNVVELRNAILNGPETHPGATLYADKTSTLKLPLDRRSRSLTSRKLQ 506

Query: 1683 SSRGVVAQPGKNLEHELEGKVVYRHLQDGDIVLVNRQPTLHKPSIMAHVVRVLSGEKTLR 1862
            SSRGV+   GK  ++E EGKVVYRHL+DGD+VLVNRQPTLHKPSIMAHVVRVL GEKT+R
Sbjct: 507  SSRGVIMHNGKIHDNEFEGKVVYRHLKDGDVVLVNRQPTLHKPSIMAHVVRVLKGEKTVR 566

Query: 1863 MHYANCSTYNADFDGDEMNVHFPQDEISRAEAFNIVNANNQYILPTSGEPTRGLIQDHIV 2042
            MHYANCSTYNADFDGDE+NVHFPQDEISRAEA+NIVNANNQY+ PTSG+P R LIQDHIV
Sbjct: 567  MHYANCSTYNADFDGDEINVHFPQDEISRAEAYNIVNANNQYVKPTSGDPIRALIQDHIV 626

Query: 2043 SAVLLTKKDTFLTWEEYNHLLYSSGVSAAARDFFSSKPGQKVSVINSEAEIEPILPAILK 2222
            SA LLTKKDTFL+ EE+N LLYSSGVS      F  KPGQK+ + NS++E+    PAI K
Sbjct: 627  SAALLTKKDTFLSCEEFNQLLYSSGVSMTGMGPFPGKPGQKIFMSNSDSEMFLFPPAIFK 686

Query: 2223 PVPMWTGKQVITSLLNHISRTRGFEPLTVEKSGKIKKEYF------GRK----------- 2351
            P P+WTGKQVI++LL +I  T+G  P TVEK+ KI   +F      G+K           
Sbjct: 687  PEPLWTGKQVISALLYYI--TKGSPPFTVEKNAKIPSSFFKTRMREGKKRTKDTSIKKDE 744

Query: 2352 SDEANLLIQKNELVHGVIDKAQFGEYGLVHTVQEFYGSDTAGILLSVLSRLFTVFLQMHG 2531
             DE  LLI +N+LV GV+DKAQFG+YG+VHTVQEFYGS+TAGILLS LSRLFT FLQMHG
Sbjct: 745  PDEDKLLIYRNDLVRGVVDKAQFGDYGIVHTVQEFYGSNTAGILLSALSRLFTNFLQMHG 804

Query: 2532 FTCGVDDLLIVQELDMERMKKLQRSDKIGEEQHAKFIGAKEGD-IDQMELQVEIEKAIRI 2708
            FTCGVDDLL+ +  D ER  +L+  ++IG+  H +FIG  EGD ID + +Q+ +EK IR 
Sbjct: 805  FTCGVDDLLLTEGKDSERTNQLESCEEIGDIVHREFIGVMEGDNIDPITMQLNVEKKIRS 864

Query: 2709 KGESAITQLDRMMSSELNDLTSV-VNSELFPKGLLKPFPKNCLSLMTTSGAKGSLVNFTQ 2885
             GE+AIT LDR M S LN  TS  V   L  +G+LKP  KN +SLMTTSGAKGS+VNF Q
Sbjct: 865  NGEAAITYLDRKMISNLNSRTSTGVLKVLLSEGILKPSGKNWISLMTTSGAKGSMVNFQQ 924

Query: 2886 ISSLLGQQQLEGKRVPRMVSGKTLPCFPPWDPASRAGGFITDRFLTGLRPQEYYFHCMAG 3065
            ISS LGQQ+LEGKRVPRMVSGKTLPCF  WD + RAGGFI DRFLT LRPQEYYFHCMAG
Sbjct: 925  ISSHLGQQELEGKRVPRMVSGKTLPCFTSWDCSPRAGGFIIDRFLTALRPQEYYFHCMAG 984

Query: 3066 REGLVDTAVKTSRSGYLQRCLVKSLECLKVCYDHTVRDADGSVVQFCYGEDGVDVHKTSF 3245
            REGLVDTAVKTSRSGYLQRCL+K+LECLKVCYDHTVRDADGS++QF YGEDGVDVH+TSF
Sbjct: 985  REGLVDTAVKTSRSGYLQRCLMKNLECLKVCYDHTVRDADGSIIQFHYGEDGVDVHQTSF 1044

Query: 3246 VTKFDTLAANQRVLERLGDHFEDAQMKSDDYIKELPEALEQKTKDFLSNLTKQQRHSLHL 3425
            + KF+ L+ N+ ++        D   KS  YI +LP+AL+ K + F+ + + +QR+S  +
Sbjct: 1045 INKFEALSTNKELVYSNCCRELD---KSSPYINKLPDALKGKAEKFILDSSSKQRNSGSM 1101

Query: 3426 RKRKDFXXXXXXXXXXXXAQPGEPVGVIAAQSVGQPSTQMTLNTFHHAGLGAMNVTLGIP 3605
                +F            AQPGEPVGV+A+QSVG+P+TQMTLNTFH AG G MNVTLGIP
Sbjct: 1102 -THTNFLHLMEHKYVSSLAQPGEPVGVLASQSVGEPATQMTLNTFHLAGRGEMNVTLGIP 1160

Query: 3606 RLQEILMRASETIQTPVMTCPLLMGKTWDDAKRLAATLKKVSVADIVESIEVCVVPFSVK 3785
            RLQEIL  AS  I+TP MTCPL   K+ +DA RLA  +KK++VADI+ES++V VVP +V+
Sbjct: 1161 RLQEILTAASAHIKTPFMTCPLRPNKSMEDAIRLADKMKKITVADIIESMKVSVVPVTVQ 1220

Query: 3786 KHQVSSIYKLKMKLYRPELYPPFSDITLEDCLKTMEVLFVGELEEEIQAHLIMLSKISGI 3965
              ++ SIYKL MKL++P+ YP ++D+TL+D  +T+ V FV  LE+ I+ ++ +L+KISGI
Sbjct: 1221 DGRICSIYKLMMKLHKPKHYPKYTDVTLKDWEETLRVSFVRGLEDAIENNIALLAKISGI 1280

Query: 3966 KNIVLSAQSGSSKDIDEGDTGSKSQQVGEENDENAGD 4076
             N    AQ  SS   ++  +  K+     ++D++ GD
Sbjct: 1281 TNFKTDAQPNSSNGAEDDPSNGKT----NDDDDDDGD 1313


>ref|XP_004513652.1| PREDICTED: DNA-directed RNA polymerase I subunit rpa1-like [Cicer
            arietinum]
          Length = 1660

 Score = 1477 bits (3823), Expect = 0.0
 Identities = 781/1360 (57%), Positives = 972/1360 (71%), Gaps = 23/1360 (1%)
 Frame = +3

Query: 66   MAYTTEGATESVEAVGFSFLTNEEVRTLSFKKITNPILLDNLGRPAPDGLYDPAMGPLED 245
            MA  TEGAT SV+AV FSFLT+EE+   S  KITNPILLD L  P   GLYDPA+GP  +
Sbjct: 1    MALATEGATNSVKAVAFSFLTDEEILKSSRVKITNPILLDTLHSPVAGGLYDPALGPFHE 60

Query: 246  RTLCKSCGQRSFQCPGHCGHIDLVSPIYNPLLFRILFNLLQRTCFFCYHFRVNREQVKKC 425
            ++ C+SCGQ S+ CPGH GHI+LVSP YNPL+F +L N+L+RTCF C+HF+ +R++V+  
Sbjct: 61   KSPCQSCGQNSYHCPGHFGHIELVSPAYNPLMFSMLSNVLRRTCFSCHHFQASRKEVELR 120

Query: 426  ALQLELIIKGDIVGAKXXXXXXXXXXXXXXXXXRVHVKGLPRQVPNYNSKNLKQHSWTSL 605
            A QLELI+KG+I  AK                               +S      +WTSL
Sbjct: 121  ANQLELIMKGNIAKAKNLDEINLDESADLCDG----------DDSQCSSAEQLGENWTSL 170

Query: 606  QYSEAMSLLDELMTGQKTECKRCGAKNPKITCPNFGWFHVN-MPNKYTRANIIKGSKLNK 782
            Q+SEAMS+L + +  +  +C+ CG  NPKIT P FGWFHV  +     RAN+I G+ ++ 
Sbjct: 171  QFSEAMSVLRKFLKKEYRKCQNCGYINPKITIPTFGWFHVKALSAAQARANVISGNDVSL 230

Query: 783  LSMGKAKRNSTGEEENANDSSAMGDVDSTDAE--SSGVVYDGTPDSAQKVKGGYLYPEFL 956
             S            E  +D  ++G+ D+TD E  +SG + +       K K         
Sbjct: 231  AS------------EIIHDDISLGNGDTTDVEDITSGDIANSNAKRHNKEK--------Q 270

Query: 957  KQKEFFSGPLLPSEVKNHMKLLWENETQLCSLICDIQQERLSISGMKGNYSMFFIEALLV 1136
                  +G LLPS+V+  ++LLWEN+ +LC  I DIQ   +   G K  +SMFF+E + V
Sbjct: 271  ISSHTLAGSLLPSQVQRILELLWENDARLCLYISDIQGLGI---GKKAGHSMFFLENIYV 327

Query: 1137 PPIKFRPPSKGGDSVMEHPQTVLLNKVMYSNISLCNEHMNSSERSKIVPRWFDLQQSINV 1316
            PPIKFRPP+KG D V EH QTVLL +V+ SNISL   H+N S+ S ++ RW DLQ+S+N+
Sbjct: 328  PPIKFRPPTKGDDKVSEHAQTVLLTRVLESNISLGQAHLNKSDASVVLRRWMDLQRSVNL 387

Query: 1317 LFGNSKTAG-LRENMATGICQLLEKKEGIFRQKMMGKRVNYACRSVISPDPYLAVNEIGI 1493
            LF N   +G  ++++ TGICQLLEKKEGIFRQKMMGKRVNYACRSVISPDPYLAVNEIGI
Sbjct: 388  LFDNKTASGESQKDLVTGICQLLEKKEGIFRQKMMGKRVNYACRSVISPDPYLAVNEIGI 447

Query: 1494 PPYFALRLTYPERVTPWNVNKLRDAIINGAEVHPGATHYVDKLATVKLPPNRKIRTSISR 1673
            PPYFALRLTYPERVTPWNV +LR+AI+NG E HPGAT Y DK +T+KLP +R+ R+  SR
Sbjct: 448  PPYFALRLTYPERVTPWNVVELRNAILNGPETHPGATLYADKTSTLKLPLDRRSRSLTSR 507

Query: 1674 KLHSSRGVVAQPGKNLEHELEGKVVYRHLQDGDIVLVNRQPTLHKPSIMAHVVRVLSGEK 1853
            +L SSRGV+   GK  ++E EGKVVYRHL+DGD+VLVNRQPTLHKPSIMAHVVRVL GEK
Sbjct: 508  RLQSSRGVIMHNGKIHDNEFEGKVVYRHLKDGDVVLVNRQPTLHKPSIMAHVVRVLKGEK 567

Query: 1854 TLRMHYANCSTYNADFDGDEMNVHFPQDEISRAEAFNIVNANNQYILPTSGEPTRGLIQD 2033
            T+RMHYANCSTYNADFDGDE+NVHFPQDEISRAEA+NIVNANNQY+ PTSG+P R LIQD
Sbjct: 568  TVRMHYANCSTYNADFDGDEINVHFPQDEISRAEAYNIVNANNQYVKPTSGDPIRALIQD 627

Query: 2034 HIVSAVLLTKKDTFLTWEEYNHLLYSSGVSAAARDFFSSKPGQKVSVINSEAEIEPILPA 2213
            HIVSA LLTKKDTFL+ EE+N LLYSSGVS      F  KPGQK+ + NS++E+    PA
Sbjct: 628  HIVSAALLTKKDTFLSCEEFNQLLYSSGVSMTGMGPFPGKPGQKIFMSNSDSEMFLFPPA 687

Query: 2214 ILKPVPMWTGKQVITSLLNHISRTRGFEPLTVEKSGKIKKEYF------GRK-------- 2351
            I KP P+WTGKQVI++LL +I  T+G  P TVEK+ KI   +F      G+K        
Sbjct: 688  IFKPEPLWTGKQVISALLYYI--TKGSPPFTVEKNAKIPSSFFKTRMREGKKRTKDTSIK 745

Query: 2352 ---SDEANLLIQKNELVHGVIDKAQFGEYGLVHTVQEFYGSDTAGILLSVLSRLFTVFLQ 2522
                DE  LLI KN+LV GV+DKAQFG+YG+VHTVQEFYGS+TAG LLS LSRLFT FLQ
Sbjct: 746  KDEPDEDKLLIYKNDLVRGVVDKAQFGDYGIVHTVQEFYGSNTAGFLLSALSRLFTNFLQ 805

Query: 2523 MHGFTCGVDDLLIVQELDMERMKKLQRSDKIGEEQHAKFIGAKEGD-IDQMELQVEIEKA 2699
            MHGFTCGVDDLL+ +  D ER  +L+  ++IG+  H +FIG  EGD ID + +Q+ +EK 
Sbjct: 806  MHGFTCGVDDLLLTEGKDSERTNQLESCEEIGDIVHREFIGVMEGDNIDPITMQLNVEKK 865

Query: 2700 IRIKGESAITQLDRMMSSELNDLTSV-VNSELFPKGLLKPFPKNCLSLMTTSGAKGSLVN 2876
            IR  GE+AIT LDR M S LN  TS  V  EL  +G+LKP  KN +SLMTTSGAKGS+VN
Sbjct: 866  IRSNGEAAITYLDRKMISNLNSRTSSGVLKELLSEGILKPSGKNWISLMTTSGAKGSMVN 925

Query: 2877 FTQISSLLGQQQLEGKRVPRMVSGKTLPCFPPWDPASRAGGFITDRFLTGLRPQEYYFHC 3056
            F QISS LGQQ+LEGKRVPRMVSGKTLPCF  WD + RAGGFI DRFLT LRPQEYYFHC
Sbjct: 926  FQQISSHLGQQELEGKRVPRMVSGKTLPCFTSWDCSPRAGGFIIDRFLTALRPQEYYFHC 985

Query: 3057 MAGREGLVDTAVKTSRSGYLQRCLVKSLECLKVCYDHTVRDADGSVVQFCYGEDGVDVHK 3236
            MAGREGLVDTAVKTSRSGYLQRCL+K+LECLKVCYDHTVRDADGS++QF YGEDGVDVH+
Sbjct: 986  MAGREGLVDTAVKTSRSGYLQRCLMKNLECLKVCYDHTVRDADGSIIQFHYGEDGVDVHQ 1045

Query: 3237 TSFVTKFDTLAANQRVLERLGDHFEDAQMKSDDYIKELPEALEQKTKDFLSNLTKQQRHS 3416
            TSF+ KF+ L+ N+ ++        D   +S  YI +LP+AL+ K + F+ + + +QR+S
Sbjct: 1046 TSFINKFEALSTNKELVYSNCCRELD---ESSPYINKLPDALKGKAEKFIRDSSSKQRNS 1102

Query: 3417 LHLRKRKDFXXXXXXXXXXXXAQPGEPVGVIAAQSVGQPSTQMTLNTFHHAGLGAMNVTL 3596
              +    +F            AQPGEPVGV+A+QSVG+P+TQMTLNTFH AG G MNVTL
Sbjct: 1103 GSM-THTNFLQLMEHKYVSSLAQPGEPVGVLASQSVGEPATQMTLNTFHLAGRGEMNVTL 1161

Query: 3597 GIPRLQEILMRASETIQTPVMTCPLLMGKTWDDAKRLAATLKKVSVADIVESIEVCVVPF 3776
            GIPRLQEIL  AS  I+TP MTCPL   K+ +DA RLA  +KK++VADI+ES++V VVP 
Sbjct: 1162 GIPRLQEILTAASAHIKTPFMTCPLRPNKSMEDAIRLADKMKKITVADIIESMKVSVVPV 1221

Query: 3777 SVKKHQVSSIYKLKMKLYRPELYPPFSDITLEDCLKTMEVLFVGELEEEIQAHLIMLSKI 3956
            +V+  ++ SIYKL MKL++P+ YP ++D+TL+D  +T+ V FV  LE+ I+ ++ +L+KI
Sbjct: 1222 TVQDGRICSIYKLMMKLHKPKHYPKYTDVTLKDWEETLRVSFVRGLEDAIENNIALLAKI 1281

Query: 3957 SGIKNIVLSAQSGSSKDIDEGDTGSKSQQVGEENDENAGD 4076
            SGI N    AQ  SS   ++  +  K+    +++D+   D
Sbjct: 1282 SGITNFKTDAQPNSSNGAEDDPSNGKTNDDDDDDDDGDAD 1321


>ref|XP_004249758.1| PREDICTED: DNA-directed RNA polymerase I subunit rpa1-like [Solanum
            lycopersicum]
          Length = 1677

 Score = 1475 bits (3819), Expect = 0.0
 Identities = 768/1367 (56%), Positives = 977/1367 (71%), Gaps = 35/1367 (2%)
 Frame = +3

Query: 81   EGATESVEAVGFSFLTNEEVRTLSFKKITNPILLDNLGRPAPDGLYDPAMGPLEDRTLCK 260
            +GA+E+VEAV FSF+T+EEVR  S  K+T+P LLD L  P P+GLYDPAMGPL+  + CK
Sbjct: 3    QGASETVEAVHFSFMTDEEVRRHSVVKVTSPNLLDGLQLPVPNGLYDPAMGPLDHYSQCK 62

Query: 261  SCGQRSFQCPGHCGHIDLVSPIYNPLLFRILFNLLQRTCFFCYHFRVNREQVKKCALQLE 440
             C Q +  C GHCGHI+LVSP+YNPLLF +L NLLQRTCF+C+HFR +R +V+KC  +LE
Sbjct: 63   FCSQSN--CSGHCGHIELVSPVYNPLLFNMLHNLLQRTCFYCFHFRASRAEVEKCVSELE 120

Query: 441  LIIKGDIVGAKXXXXXXXXXXXXXXXXXRVHVKGLP-----RQVPNYNSKNLKQHSWTSL 605
            LI KGD+VGAK                   H+         R    YN    K+ SW + 
Sbjct: 121  LIAKGDVVGAKMIDALSPDNSTDREESEGSHMSCTMDDLNVRDHCEYN----KRPSWDNF 176

Query: 606  QYSEAMSLLDELMTGQKTECKRCGAKNPKITCPNFGWFHVNMPNKYTRANIIK-GSKLNK 782
            Q++EAM+++D ++  +  +C  C AKNPKI  P+FG FH+++ NK  R N I  G + N 
Sbjct: 177  QFTEAMAVIDRILKTKTEKCSNCKAKNPKIRKPSFGRFHMDISNKQIRENYINSGRRFNL 236

Query: 783  LSMGKAKRNSTGEEENANDSSAMGDVDSTDAESSGVVYDGTPDS-AQKVKGGYLYPEFLK 959
               G ++ N + E  NA +   +G+ +++   +S    DG  +S  +K +GG       +
Sbjct: 237  HDTGGSEENPSPEVVNATEP--LGEAETSLCVTST---DGVENSKGRKRQGGDQSDVVEQ 291

Query: 960  QKEFFSGPLLPSEVKNHMKLLWENETQLCSLICDIQQERLSISGMKGNYSMFFIEALLVP 1139
            QK+ FS   LPS+V++ ++ LWENE  LC+  CDIQ +  + SG     SMFF++++LVP
Sbjct: 292  QKDSFSVAHLPSQVRSIIEHLWENEAPLCTFFCDIQSQHRNTSGKVAGPSMFFLDSILVP 351

Query: 1140 PIKFRPPSKGGDSVMEHPQTVLLNKVMYSNISLCNEHMNSSERSKIVPRWFDLQQSINVL 1319
            P+KFRPP+KGGDS+MEHP TVLL KV+ +NI+L N H+N + RSKI+ R  DLQQS+NVL
Sbjct: 352  PVKFRPPAKGGDSIMEHPHTVLLGKVIQANIALGNAHINRAGRSKIISRLMDLQQSVNVL 411

Query: 1320 FGNSKTAGL-RENMATGICQLLEKKEGIFRQKMMGKRVNYACRSVISPDPYLAVNEIGIP 1496
            F +   +G  ++++ +GICQ+LEKKEGIFRQKMMGKRVN+ACRSVISPDPYL+VNEIGIP
Sbjct: 412  FDSKTASGPGQKDVGSGICQMLEKKEGIFRQKMMGKRVNFACRSVISPDPYLSVNEIGIP 471

Query: 1497 PYFALRLTYPERVTPWNVNKLRDAIINGAEVHPGATHYVDKLATVKLPPNRKIRTSISRK 1676
            PYFA RLTYPER+TPWN  K+RDA+ING E HPGA  + D++ATVKLP N+K+R +ISRK
Sbjct: 472  PYFASRLTYPERLTPWNAVKMRDAVINGPENHPGAISFADRIATVKLPSNKKMRVAISRK 531

Query: 1677 LHSSRGVVAQPGKNLEHELEGKVVYRHLQDGDIVLVNRQPTLHKPSIMAHVVRVLSGEKT 1856
            L SSRG V Q G+N E+E EGKVVYRHLQDGD+VLVNRQPTLHKPSIMAHVVRVL GEKT
Sbjct: 532  LPSSRGAVTQSGRNNEYEFEGKVVYRHLQDGDVVLVNRQPTLHKPSIMAHVVRVLKGEKT 591

Query: 1857 LRMHYANCSTYNADFDGDEMNVHFPQDEISRAEAFNIVNANNQYILPTSGEPTRGLIQDH 2036
            LRMHYANCSTYNADFDGDEMNVHFPQDEISRAEA+NIVNAN QYI+PT G+  RGLIQDH
Sbjct: 592  LRMHYANCSTYNADFDGDEMNVHFPQDEISRAEAYNIVNANEQYIVPTKGDTVRGLIQDH 651

Query: 2037 IVSAVLLTKKDTFLTWEEYNHLLYSSGVSAAARDFFSSKPGQKVSVINSEAEIEPILPAI 2216
            IV AV+LT K+TFL+  E+N LLY SGV AA     S     KVS+++ E  ++ +LPA+
Sbjct: 652  IVGAVILTMKNTFLSLHEFNQLLYGSGVFAAGPAPTSGNHSNKVSIVDFEGVVQTVLPAV 711

Query: 2217 LKPVPMWTGKQVITSLLNHISRTRGFEPLTVEKSGKIKKEYFGRKS-------------- 2354
             KP P+WTGKQVIT+LLNH+  T G  P TV+  GKI   YF  +S              
Sbjct: 712  WKPKPLWTGKQVITALLNHL--TNGCPPCTVKNKGKIPYAYFLSESRLVEYQSREEQEDR 769

Query: 2355 -DEANLLIQKNELVHGVIDKAQFGEYGLVHTVQEFYGSDTAGILLSVLSRLFTVFLQMHG 2531
              E   LI KNELV GVIDKAQFG++GLVHT+QE YGS+ AGILLS LSRLFT+FLQ+HG
Sbjct: 770  TAENEFLIWKNELVRGVIDKAQFGKFGLVHTIQELYGSNKAGILLSALSRLFTIFLQLHG 829

Query: 2532 FTCGVDDLLIVQELDMERMKKLQRSDKIGEEQHAKFIGAKEGDIDQMELQVEIEKAIRIK 2711
            FTCG+DDL+I+   D+ R ++L+  D +GEE H  F+  K G+I  +ELQ+EIEKAI   
Sbjct: 830  FTCGIDDLVILPHYDIRRKEELE-GDDVGEEAHCDFVKFKRGEIGPLELQLEIEKAISSN 888

Query: 2712 GESAITQLDRMMSSELNDLTSVVNSELFPKGLLKPFPKNCLSLMTTSGAKGSLVNFTQIS 2891
             E A   LD  M ++L +  S  N EL  KGLLKPFP+NC++LMT +GAKGS VNF QIS
Sbjct: 889  KEVATAALDMKMKNKLANKGSQFNKELLLKGLLKPFPRNCIALMTITGAKGSTVNFQQIS 948

Query: 2892 SLLGQQQLEGKRVPRMVSGKTLPCFPPWDPASRAGGFITDRFLTGLRPQEYYFHCMAGRE 3071
            S LGQQ+LEGKRVPRMVSGKTLPCFP WD ASRAGG+++DRFL+GLRPQEYYFHCMAGRE
Sbjct: 949  SYLGQQELEGKRVPRMVSGKTLPCFPAWDCASRAGGYVSDRFLSGLRPQEYYFHCMAGRE 1008

Query: 3072 GLVDTAVKTSRSGYLQRCLVKSLECLKVCYDHTVRDADGSVVQFCYGEDGVDVHKTSFVT 3251
            GLVDTAVKTSRSGYLQRCL+K+LE LKVCYD+TVRDADGS++QF YGEDGVDVH+TSF+ 
Sbjct: 1009 GLVDTAVKTSRSGYLQRCLIKNLESLKVCYDYTVRDADGSIIQFYYGEDGVDVHRTSFLK 1068

Query: 3252 KFDTLAANQRVLERLGDHFEDAQMKSDDYIKELPEALEQKTKDFLSNLTKQQRHSLHLRK 3431
             F  L  NQ  + +   H      K + YI++LP+ L +K K F  + TK+    L +  
Sbjct: 1069 NFKALKNNQETICQKLRH----GCKLNSYIEKLPDGLGEKVKHFWESKTKKLEKKLGMLV 1124

Query: 3432 RK------------DFXXXXXXXXXXXXAQPGEPVGVIAAQSVGQPSTQMTLNTFHHAGL 3575
            +K            DF            A  GEPVGV+A QSVG+PSTQMTLNTFH AG 
Sbjct: 1125 KKEEMVKQLKEEEADFLELVGQKYFSSLADSGEPVGVLAGQSVGEPSTQMTLNTFHLAGR 1184

Query: 3576 GAMNVTLGIPRLQEILMRASETIQTPVMTCPLLMGKTWDDAKRLAATLKKVSVADIVESI 3755
            G MNVTLGIPRLQEILM ASE I+TP+MTCP L  K+ +DA+ L A +KK++VAD++ES+
Sbjct: 1185 GEMNVTLGIPRLQEILMTASEAIKTPIMTCPFLGWKSKNDAQSLLAKVKKITVADMIESM 1244

Query: 3756 EVCVVPFSVKKHQVSSIYKLKMKLYRPELYPPFSDITLEDCLKTMEVLFVGELEEEIQAH 3935
            EV ++P S+  HQVS +YKL +KL + +       ++ EDC  T++ +F+ ELE+ I++H
Sbjct: 1245 EVKLLPLSIYNHQVSQLYKLTVKLKKHDF------VSSEDCEYTLKFVFLRELEDAIESH 1298

Query: 3936 LIMLSKISGIKNIVLSAQSGSSKDIDEGDTGSKSQQVGEENDENAGD 4076
            L +LSKI+GI+N   S++S  S + +E  + ++ ++   ++D++  D
Sbjct: 1299 LALLSKINGIQNFKTSSESVDSDETEENASSTRREEEMLDDDDDDED 1345


>emb|CAN70028.1| hypothetical protein VITISV_029145 [Vitis vinifera]
          Length = 1350

 Score = 1459 bits (3777), Expect = 0.0
 Identities = 784/1288 (60%), Positives = 925/1288 (71%), Gaps = 81/1288 (6%)
 Frame = +3

Query: 66   MAYTTEGATESVEAVGFSFLTNEEVRTLSFKKITNPILLDNLGRPAPDGLYDPAMGPLED 245
            +++  EG TE VEAV FSF T+EEVR  SFKKIT+P++LD++ RP P GLYDPA+G +++
Sbjct: 94   VSFDYEGTTEFVEAVKFSFFTDEEVRKYSFKKITSPLMLDSVQRPVPGGLYDPALGSIDE 153

Query: 246  RTLCKSCGQRSFQCPGHCGHIDLVSPIYNPLLFRILFNLLQRTCFFCYHFRVNREQVKKC 425
             T            PG+ G I L+      L      N      F          QV+K 
Sbjct: 154  NT------------PGN-GRILLIVKKREELQX---VNHAASVHFIA--------QVQKY 189

Query: 426  ALQLELIIKGDIVGAKXXXXXXXXXXXXXXXXXRVHVK---GLPRQVPNYNSKNLKQHSW 596
              QLELI KGD+VGAK                   HV     +     +  S +LKQ  W
Sbjct: 190  VSQLELISKGDVVGAKNLDSISPSESSYPEDSDGSHVSCSSTVNSSARDNCSVHLKQQEW 249

Query: 597  TSLQYSEAMSLLDELMTGQKTECKRCGAKNPKITCPNFGWFHV-NMPNKYTRANIIKGSK 773
            TSLQ  EAMS++D  +  +  +CK C AK+P++T P FGWFH+  + +  TRAN+I+GSK
Sbjct: 250  TSLQCIEAMSVMDNFLKLKHRDCKNCKAKSPQVTKPTFGWFHMAGLSDAQTRANVIRGSK 309

Query: 774  LNKLSMGKAKRNSTGEEENANDSSAMGD-VDSTDAESSGVVYDGTPDSAQKV---KGGYL 941
            L +     A+  S+ E EN ND    GD VD+ +  SS    DG  D+  K    KG   
Sbjct: 310  LERPLSRVAEEKSSSEVENVNDMFPWGDGVDTDETHSSIAPTDGIQDTVTKXLERKGAQA 369

Query: 942  YPEFLKQKEFFSGPLLPSE----------------------------VKNHMKLLWENET 1037
              EF+KQK FFSGPLLPSE                            V++ M+ LWENE 
Sbjct: 370  PIEFIKQKSFFSGPLLPSEVCFLXALEHHHQLPWLMSVVVVNYVVTKVRDIMERLWENEA 429

Query: 1038 QLCSLICDIQQERLSISGMKGNYSMFFIEALLVPPIKFRPPSKGGDSVMEHPQTVLLNKV 1217
            +LCS I DI QERL  SG K  YSMFF+E +LVPPIKFRPPSKG  SVMEHPQTVLL KV
Sbjct: 430  ELCSFISDILQERLGASGNKAGYSMFFLETILVPPIKFRPPSKGQISVMEHPQTVLLGKV 489

Query: 1218 MYSNISLCNEHMNSSERSKIVPRWFDLQQSINVLFGNSKTAGL-RENMATGICQLLEKKE 1394
            + +NI+L N H N+SERSKI+ RW DLQQSINVLF     AG  + +  +GICQLLEKKE
Sbjct: 490  LQANIALGNAHANNSERSKIISRWMDLQQSINVLFDGKTAAGQGQRDTGSGICQLLEKKE 549

Query: 1395 GIFRQKMMGKRVNYACRSVISPDPYLAVNEIGIPPYFALRLTYPERVTPWNVNKLRDAII 1574
            G+FRQKMMGKRVN+ACRSVISPDPYLAVNEIGIPPYFALRLTYPE+VTPWNV KLRDAII
Sbjct: 550  GVFRQKMMGKRVNFACRSVISPDPYLAVNEIGIPPYFALRLTYPEKVTPWNVVKLRDAII 609

Query: 1575 NGAEVHPGATHYVDKLATVKLPPNRKIRTSISRKLHSSRGVVAQPGKNLEHELEGKVVYR 1754
            NG E+HPGATHYVDKL+TVKL  N+K+R SISRKL SSRGVVAQPG++ ++E EGK+VYR
Sbjct: 610  NGPEIHPGATHYVDKLSTVKLAVNKKMRISISRKLPSSRGVVAQPGRSSDNEFEGKIVYR 669

Query: 1755 HLQDGDIVLVNRQPTLHKPSIMAHVVRVLSGEKTLRMHYANC------------------ 1880
            HLQDGDIVLVNRQPTLHKPSIMAHVVRVL GEKTLRMHYANC                  
Sbjct: 670  HLQDGDIVLVNRQPTLHKPSIMAHVVRVLKGEKTLRMHYANCRVESEHISMLDLDDCSDS 729

Query: 1881 STYNADFDGDEMNVHFPQDEISRAEAFNIVNANNQYILPTSGEPTRGLIQDHIVSAVLLT 2060
            STYNADFDGDEMNVHFPQDEISRAEA+NIVNANNQYI+P+ G+P RGLIQDHIVSAVLLT
Sbjct: 730  STYNADFDGDEMNVHFPQDEISRAEAYNIVNANNQYIVPSRGDPIRGLIQDHIVSAVLLT 789

Query: 2061 KKDTFLTWEEYNHLLYSSGVSAAARDFFSSKPGQKVSVINSEAEIEPILPAILKPVPMWT 2240
            KKDTFLT E+YN LLYSSG+S+ +  F   KPG+KVSV++SE E++P+LPAI KP P+W+
Sbjct: 790  KKDTFLTREQYNQLLYSSGLSSGSGSFI-GKPGKKVSVLDSEDEMQPLLPAIWKPEPLWS 848

Query: 2241 GKQVITSLLNHISRTRGFEPLTVEKSGKIKKEYFG------------------------- 2345
            GKQVIT++LNHI  TRG +P T EK GKI +EYFG                         
Sbjct: 849  GKQVITAVLNHI--TRGRKPFTTEKDGKIPREYFGSEIDEKKSGKGKDPGSDRRKEKRIE 906

Query: 2346 RKSDEANLLIQKNELVHGVIDKAQFGEYGLVHTVQEFYGSDTAGILLSVLSRLFTVFLQM 2525
            +K  E  LLI KNELV GVIDKAQF +YGLVH VQE YGS+TAGILLSVLSRLFTVFLQM
Sbjct: 907  KKHGEYKLLIHKNELVRGVIDKAQFDKYGLVHMVQELYGSNTAGILLSVLSRLFTVFLQM 966

Query: 2526 HGFTCGVDDLLIVQELDMERMKKLQRSDKIGEEQHAKFIGAKEGDIDQMELQVEIEKAIR 2705
            HGFTCGVDDLLI    D+ R  +L +S+ IGE  H KFIG+  G ID ++LQVE+EK I 
Sbjct: 967  HGFTCGVDDLLISPNYDIARKIELDKSENIGELVHCKFIGSNHGKIDPVKLQVEVEKIIL 1026

Query: 2706 IKGESAITQLDRMMSSELNDLTSVVNSELFPKGLLKPFPKNCLSLMTTSGAKGSLVNFTQ 2885
              GE+AIT+LDRMM +ELN+LTS VN +L  KGL+KPFPKNCLSLMTT+GAKGS VNF+Q
Sbjct: 1027 SNGEAAITRLDRMMKNELNELTSKVNKDLLLKGLVKPFPKNCLSLMTTTGAKGSTVNFSQ 1086

Query: 2886 ISSLLGQQQLEGKRVPRMVSGKTLPCFPPWDPASRAGGFITDRFLTGLRPQEYYFHCMAG 3065
            ISS LGQQ LEGKRVPRMVSGKTLPCFPPWD A+RAGGFI+DRFLTGL PQEYYFHCMAG
Sbjct: 1087 ISSFLGQQDLEGKRVPRMVSGKTLPCFPPWDCAARAGGFISDRFLTGLHPQEYYFHCMAG 1146

Query: 3066 REGLVDTAVKTSRSGYLQRCLVKSLECLKVCYDHTVRDADGSVVQFCYGEDGVDVHKTSF 3245
            REGLVDTAVKTSRSGYLQRCL+K+LECLKVCYD+TVRD+DGS+VQF YG+DGVDVH+TSF
Sbjct: 1147 REGLVDTAVKTSRSGYLQRCLIKNLECLKVCYDYTVRDSDGSIVQFNYGDDGVDVHQTSF 1206

Query: 3246 VTKFDTLAANQRVL-ERLGDHFEDAQMKSDDYIKELPEALEQKTKDFLSNLTKQQRHSLH 3422
            +T+F+ LA NQ V+ E+ G        K + YI++LP+ L +KTK F+    ++++   +
Sbjct: 1207 ITEFEALAVNQEVVCEKFGQ-----DGKFNGYIQKLPKELRKKTKKFIEGFMEERQDFDN 1261

Query: 3423 LRKRKDFXXXXXXXXXXXXAQPGEPVGVIAAQSVGQPSTQMTLNTFHHAGLGAMNVTLGI 3602
            ++K+KDF            AQPGEPVGV+AAQSVG+PSTQMTLNTFH AG G +NVTLGI
Sbjct: 1262 MKKQKDFVNLVKQKYISSLAQPGEPVGVLAAQSVGEPSTQMTLNTFHLAGRGEVNVTLGI 1321

Query: 3603 PRLQEILMRASETIQTPVMTCPLLMGKT 3686
            PRLQEILM A+  I+TP+MTCPL MG++
Sbjct: 1322 PRLQEILMTAANDIKTPIMTCPLQMGRS 1349


>ref|XP_003607990.1| DNA-directed RNA polymerase subunit beta [Medicago truncatula]
            gi|355509045|gb|AES90187.1| DNA-directed RNA polymerase
            subunit beta [Medicago truncatula]
          Length = 1628

 Score = 1446 bits (3742), Expect = 0.0
 Identities = 772/1357 (56%), Positives = 955/1357 (70%), Gaps = 20/1357 (1%)
 Frame = +3

Query: 66   MAYTTEGATESVEAVGFSFLTNEEVRTLSFKKITNPILLDNLGRPAPDGLYDPAMGPLED 245
            MA   EGAT ++E+V FSFLTNEE+   S  K+T+  L +N+G P   GLYDPA GPL D
Sbjct: 1    MALANEGATNAIESVAFSFLTNEELLKSSRVKVTDTNLCNNIGHPVRGGLYDPAFGPLLD 60

Query: 246  -RTLCKSCGQRSFQCPGHCGHIDLVSPIYNPLLFRILFNLLQRTCFFCYHFRVNREQVKK 422
             R+ C+SCG     C GH GHI+LVSP+YNPL+F  L  +L RTCF C++FR +R++VK+
Sbjct: 61   NRSNCESCGMSKDHCSGHFGHIELVSPVYNPLMFLFLGKILNRTCFSCHYFRASRDEVKR 120

Query: 423  CALQLELIIKGDIVGAKXXXXXXXXXXXXXXXXXRVHVKGLPRQVPNYNSKNLKQHSWTS 602
             A QLELI+KG+I  AK                              ++       SWTS
Sbjct: 121  RASQLELILKGNISKAKSLGEIKLNETIDSVDDDD--------DDSQWSGAEQLGESWTS 172

Query: 603  LQYSEAMSLLDELMTGQKTECKRCGAKNPKITCPNFGWFHVN-MPNKYTRANIIKGSKLN 779
            LQ+SEAMS++ E +     +C  CG  +PKIT P FG F+V  + +   RAN+I  +K  
Sbjct: 173  LQFSEAMSVIYEFLAKDYKKCLNCGCISPKITKPTFGRFNVKALSSVQARANVISSAK-- 230

Query: 780  KLSMGKAKRNSTGEEENANDSSAMGDVDSTDAESSGVVYDGTPDSAQKVKGGYLYPEFLK 959
                                 +A    D  D  S G       +    +K        L 
Sbjct: 231  ---------------------AADVQADEEDITSGGAGNSNGNNQILSIK--------LV 261

Query: 960  QKEFFSGPLLPSEVKNHMKLLWENETQLCSLICDIQQERLSISGMKGNYSMFFIEALLVP 1139
            ++   SG LLPS+V+  +KLLW+NE++LCS I DIQ +     G K  +SMFF+E + VP
Sbjct: 262  EQSSLSGSLLPSQVQEMIKLLWKNESRLCSHISDIQDQGF---GKKAGHSMFFLENIFVP 318

Query: 1140 PIKFRPPSKGGDSVMEHPQTVLLNKVMYSNISLCNEHMNSSERSKIVPRWFDLQQSINVL 1319
            PIKFRPP K GD+V EHPQTVLL+KV+ SNISL + H   S+   I+ RW DLQ S+N+L
Sbjct: 319  PIKFRPPLKAGDNVAEHPQTVLLSKVLESNISLADAHRTKSDAYYILRRWQDLQGSVNLL 378

Query: 1320 FGNSKTAGLRENMATGICQLLEKKEGIFRQKMMGKRVNYACRSVISPDPYLAVNEIGIPP 1499
            F N KT+   +  A+GICQLL+KKEGIFRQKMMGKRVNYACRSVISPDPYLAVNEIGIPP
Sbjct: 379  FDN-KTSLRSQKDASGICQLLDKKEGIFRQKMMGKRVNYACRSVISPDPYLAVNEIGIPP 437

Query: 1500 YFALRLTYPERVTPWNVNKLRDAIINGAEVHPGATHYVDKLATVKLPPNRKIRTSISRKL 1679
            YFALRLTYPERVTPWN  KL DAI+NG + HPGA  Y DK +T++L  ++ +R+S SR+L
Sbjct: 438  YFALRLTYPERVTPWNSAKLMDAILNGPDTHPGAILYTDKTSTLRLQKDKSLRSSTSRRL 497

Query: 1680 HSSRGVVAQPGKNLEHELEGKVVYRHLQDGDIVLVNRQPTLHKPSIMAHVVRVLSGEKTL 1859
             SSRGV+   GK  EHE EGKVVYRHL+DGD+VLVNRQPTLHKPSIMAHVVRVL GEKT+
Sbjct: 498  QSSRGVIMHHGKIHEHEFEGKVVYRHLKDGDVVLVNRQPTLHKPSIMAHVVRVLKGEKTV 557

Query: 1860 RMHYANCSTYNADFDGDEMNVHFPQDEISRAEAFNIVNANNQYILPTSGEPTRGLIQDHI 2039
            RMHYANCSTYNADFDGDE+NVHFPQDEISRAEA+NIVNANNQY+ PTSG+P R LIQDHI
Sbjct: 558  RMHYANCSTYNADFDGDEINVHFPQDEISRAEAYNIVNANNQYVKPTSGDPIRALIQDHI 617

Query: 2040 VSAVLLTKKDTFLTWEEYNHLLYSSGVSAAARDFFSSKPGQKVSVINSEAEIEPILPAIL 2219
            VSA LLTKKDTFL+ +E+N LLYSSGVS      FS KPGQKV + NSE+E+    PAI 
Sbjct: 618  VSAALLTKKDTFLSCQEFNQLLYSSGVSMTGMGSFSCKPGQKVLMSNSESEMFLFPPAIF 677

Query: 2220 KPVPMWTGKQVITSLLNHISRTRGFEPLTVEKSGKIKKEYF--------------GRKSD 2357
            KP P+WTGKQVI++LL +I  T+G  P TVEK+ KI   +F               RK D
Sbjct: 678  KPEPLWTGKQVISALLCYI--TKGRPPFTVEKNAKIPSSFFKTQTGEIKKHTKDTSRKKD 735

Query: 2358 EA--NLLIQKNELVHGVIDKAQFGEYGLVHTVQEFYGSDTAGILLSVLSRLFTVFLQMHG 2531
            E    LLI +N+LV GV+DKAQFG+YG+VHTVQEFYGS+TAGILLS LSRLFT FLQMHG
Sbjct: 736  ELEDKLLIYRNDLVRGVVDKAQFGDYGMVHTVQEFYGSNTAGILLSALSRLFTNFLQMHG 795

Query: 2532 FTCGVDDLLIVQELDMERMKKLQRSDKIGEEQHAKFIGAKEGD-IDQMELQVEIEKAIRI 2708
            FTCGVDDLLI    D ER+ +L+  ++IG+  H +FIG  E + ID + +Q+ +EK IR 
Sbjct: 796  FTCGVDDLLIKVGKDSERLNQLESCEEIGDIVHREFIGVMESENIDPITMQLNVEKKIRS 855

Query: 2709 KGESAITQLDRMMSSELNDLTSV-VNSELFPKGLLKPFPKNCLSLMTTSGAKGSLVNFTQ 2885
             GE+AIT LDR M S LN  TS  V  EL  KG LKP  KN +SLMTTSGAKGS+VNF Q
Sbjct: 856  NGEAAITYLDRKMISNLNSRTSSGVLKELLSKGSLKPSGKNWISLMTTSGAKGSMVNFQQ 915

Query: 2886 ISSLLGQQQLEGKRVPRMVSGKTLPCFPPWDPASRAGGFITDRFLTGLRPQEYYFHCMAG 3065
            ISS LGQQ+LEGKRVPRMVSGKTLPCFP WD + RAGGFI DRFLT LRPQEYYFHCMAG
Sbjct: 916  ISSHLGQQELEGKRVPRMVSGKTLPCFPSWDCSPRAGGFIIDRFLTALRPQEYYFHCMAG 975

Query: 3066 REGLVDTAVKTSRSGYLQRCLVKSLECLKVCYDHTVRDADGSVVQFCYGEDGVDVHKTSF 3245
            REGLVDTAVKTSRSGYLQRCL+K+LE LKVCYDHTVRD+DGS++QF YGEDGVDVH+TSF
Sbjct: 976  REGLVDTAVKTSRSGYLQRCLMKNLESLKVCYDHTVRDSDGSIIQFHYGEDGVDVHQTSF 1035

Query: 3246 VTKFDTLAANQRVLERLGDHFEDAQMKSDDYIKELPEALEQKTKDFLSNLTKQQRHSLHL 3425
            + KF+ L+ N+ ++        D   +S  YI +LP+AL+ K ++F+ + + +QR+S  +
Sbjct: 1036 INKFEALSINKELIYSNCCRQLD---RSSPYINKLPDALKGKAENFIRDFSSKQRNSSSM 1092

Query: 3426 RKRKDFXXXXXXXXXXXXAQPGEPVGVIAAQSVGQPSTQMTLNTFHHAGLGAMNVTLGIP 3605
             K  DF            AQPGEPVGV+A+QSVG+P+TQMTLNTFH AG G MNVTLGIP
Sbjct: 1093 -KEADFLQVMEHKYVSSLAQPGEPVGVLASQSVGEPATQMTLNTFHLAGRGEMNVTLGIP 1151

Query: 3606 RLQEILMRASETIQTPVMTCPLLMGKTWDDAKRLAATLKKVSVADIVESIEVCVVPFSVK 3785
            RL EI++ AS+ I+TP MTCPL   K+ +DA RLA  +KK++VADI+ES++V VVP +VK
Sbjct: 1152 RLHEIVVAASKNIKTPFMTCPLRPNKSMEDAIRLADKMKKITVADIIESMKVSVVPVAVK 1211

Query: 3786 KHQVSSIYKLKMKLYRPELYPPFSDITLEDCLKTMEVLFVGELEEEIQAHLIMLSKISGI 3965
            + ++ SIYKL MKL++P+ YP ++D+TLED  +T+ V FV ELE+ I+ H+ +L++ISGI
Sbjct: 1212 EGRICSIYKLTMKLHKPKHYPKYTDVTLEDWEETLRVGFVRELEDAIENHISLLARISGI 1271

Query: 3966 KNIVLSAQSGSSKDIDEGDTGSKSQQVGEENDENAGD 4076
            K+    + S +  D D  +  + +Q    ++D+  GD
Sbjct: 1272 KDFQGKSNSSNGLDNDHSNESASNQNGQTDDDDEVGD 1308


>ref|XP_006290488.1| hypothetical protein CARUB_v10016563mg [Capsella rubella]
            gi|482559195|gb|EOA23386.1| hypothetical protein
            CARUB_v10016563mg [Capsella rubella]
          Length = 1651

 Score = 1434 bits (3711), Expect = 0.0
 Identities = 760/1367 (55%), Positives = 962/1367 (70%), Gaps = 32/1367 (2%)
 Frame = +3

Query: 69   AYTTEGATESVEAVGFSFLTNEEVRTLSFKKITNPILLDNLGRPAPDGLYDPAMGPLEDR 248
            A TTEGA++ VE+V FSF+T ++VR  SF K+T+PILLDN+ RP P GLYDP MGPL D+
Sbjct: 4    AQTTEGASQVVESVRFSFMTEQDVRKHSFLKVTSPILLDNVERPVPGGLYDPVMGPLNDK 63

Query: 249  TLCKSCGQRSFQCPGHCGHIDLVSPIYNPLLFRILFNLLQRTCFFCYHFRVNREQVKKCA 428
              CKSCGQ    CPGHCGHI+LV PIY+PLLF +L+N LQRTCFFC+HF      VKKC 
Sbjct: 64   EACKSCGQLRLGCPGHCGHIELVYPIYHPLLFSLLYNFLQRTCFFCHHFMAKPNDVKKCV 123

Query: 429  LQLELIIKGDIVGAKXXXXXXXXXXXXXXXXXRVHVKGLPRQVPNY-NSKNLKQHSWTSL 605
             QL+LI+KGDIV AK                      G+           +++   WTSL
Sbjct: 124  SQLKLIMKGDIVSAKQLEVKSDSTSTNSEDIEVSCESGVTNDSSQECEDPDMEDQRWTSL 183

Query: 606  QYSEAMSLLDELMTGQKTECKRCGAKNPKITCPNFGWFHVNMPN-KYTRANIIKGSKLNK 782
            Q++E  +++   M     EC +C AKNPK+  P FGW  +   N     AN+I+G K+ K
Sbjct: 184  QFAEVTAVMKNFMKLTSKECNKCKAKNPKLEKPMFGWVRMKGMNASAVGANLIRGLKVKK 243

Query: 783  LSMGKAKRNSTGEEENANDSSAMGDVDS-TDAESSGVVYDGTPDSAQKVKGGYLYPEFLK 959
                     ST   EN +DS     +D+ ++AE S        D  ++ K   +  EF K
Sbjct: 244  ---------STSSVENPDDSG----IDALSEAEDS--------DKEKREKSTEIAKEFEK 282

Query: 960  QKEFFSGPLLPSEVKNHMKLLWENETQLCSLICDIQQERLSISGMKGNYSMFFIEALLVP 1139
            QK+     LLPSEV+  +K LWENE + CS I D+ Q        K +YSMFF+E++LVP
Sbjct: 283  QKDT-KRDLLPSEVRAILKNLWENEHEYCSFIGDLWQS----GSEKIDYSMFFLESVLVP 337

Query: 1140 PIKFRPPSKGGDSVMEHPQTVLLNKVMYSNISLCNEHMNSSERSKIVPRWFDLQQSINVL 1319
            PIKFRPP+KGGDSVMEHPQTV LNKV+ SNI+L N   N  ++SK++ RW +LQ+S+NVL
Sbjct: 338  PIKFRPPTKGGDSVMEHPQTVGLNKVLLSNITLGNACTNKLDQSKVISRWMNLQESVNVL 397

Query: 1320 FGNSKTAGLRENMATGICQLLEKKEGIFRQKMMGKRVNYACRSVISPDPYLAVNEIGIPP 1499
            F +   +   +   +GICQLLEKKEG+FRQKMMGKRVN+ACRSVISPDPY+AVNEIGIPP
Sbjct: 398  FDSKAASVQSQKDGSGICQLLEKKEGLFRQKMMGKRVNHACRSVISPDPYIAVNEIGIPP 457

Query: 1500 YFALRLTYPERVTPWNVNKLRDAIINGAEVHPGATHYVDKLATVKLPPNRKIRTSISRKL 1679
             FAL+L YPERVTPWNV KLR+AIING +VHPGATHY DKL+TVKLP + K RT+I+ KL
Sbjct: 458  CFALKLIYPERVTPWNVEKLREAIINGPDVHPGATHYSDKLSTVKLPSSVKERTAIANKL 517

Query: 1680 HSSRGVVAQPGKNLEHELEGKVVYRHLQDGDIVLVNRQPTLHKPSIMAHVVRVLSGEKTL 1859
             SSRG   + GK  +   EGKVVYR ++DGD+VLVNRQPTLHKPS+MAH+VRVL GEKTL
Sbjct: 518  LSSRGATTELGKTCDINFEGKVVYRQMRDGDVVLVNRQPTLHKPSLMAHIVRVLKGEKTL 577

Query: 1860 RMHYANCSTYNADFDGDEMNVHFPQDEISRAEAFNIVNANNQYILPTSGEPTRGLIQDHI 2039
            R+HYANCSTYNADFDGDEMNVHFPQDEISRAEA+NIVNANNQY  P++G+P R LIQDHI
Sbjct: 578  RLHYANCSTYNADFDGDEMNVHFPQDEISRAEAYNIVNANNQYARPSNGDPLRALIQDHI 637

Query: 2040 VSAVLLTKKDTFLTWEEYNHLLYSSGVSAAARDFFSSKPGQKVSVINSEAEIEPILPAIL 2219
            VS+VLLTK+DTFL  + +N LL+SSGV+      FS K G+KV++  S+AE+  ++PAIL
Sbjct: 638  VSSVLLTKRDTFLDKDLFNQLLFSSGVTDMVLSSFSGKSGKKVTISASDAELLTVMPAIL 697

Query: 2220 KPVPMWTGKQVITSLLNHISRTRGFEPLTVEKSGKIKKEYFGRKS--------------- 2354
            KPVP+WTGKQVIT++LN I  T+G  P TVEK+ K+  ++F  +S               
Sbjct: 698  KPVPLWTGKQVITTVLNLI--TKGHPPFTVEKATKLPVDFFKCRSREVKPNTGDLTKKKD 755

Query: 2355 ---------DEANLLIQKNELVHGVIDKAQFGEYGLVHTVQEFYGSDTAGILLSVLSRLF 2507
                     +E  LLI+KNE V GVIDKAQF ++G+VHTV E YGS+ AG LLSV SRLF
Sbjct: 756  IDESWKQDLNEDKLLIRKNEFVCGVIDKAQFADFGMVHTVHELYGSNAAGNLLSVFSRLF 815

Query: 2508 TVFLQMHGFTCGVDDLLIVQELDMERMKKLQRSDKIGEEQHAKFIGAK-EGDIDQMELQV 2684
            T FLQ+HGFTCGVDDL+I++++D ER K+LQ  +K+GE    K  G   +  ID  +++ 
Sbjct: 816  TAFLQIHGFTCGVDDLIILKDMDEERTKQLQECEKVGERVLRKTFGIDVDRQIDPQDMRS 875

Query: 2685 EIEKAIRIKGESAITQLDRMMSSELNDLTSV-VNSELFPKGLLKPFPKNCLSLMTTSGAK 2861
             IE+ +   GESA+  LDR + ++LN  +S  V ++L   GLLK   KNC+SLMT SGAK
Sbjct: 876  RIERILYEDGESALASLDRSIVNDLNQCSSKGVMNDLLSDGLLKTPGKNCISLMTISGAK 935

Query: 2862 GSLVNFTQISSLLGQQQLEGKRVPRMVSGKTLPCFPPWDPASRAGGFITDRFLTGLRPQE 3041
            GS VNF QISS LGQQ LEGKRVPRMVSGKTLPCF PWD + RAGGFI+DRFL+GLRPQE
Sbjct: 936  GSKVNFQQISSHLGQQDLEGKRVPRMVSGKTLPCFHPWDWSPRAGGFISDRFLSGLRPQE 995

Query: 3042 YYFHCMAGREGLVDTAVKTSRSGYLQRCLVKSLECLKVCYDHTVRDADGSVVQFCYGEDG 3221
            YYFHCMAGREGLVDTAVKTSRSGYLQRCL+K+LE LKV YD TVRDADGS++QF YGEDG
Sbjct: 996  YYFHCMAGREGLVDTAVKTSRSGYLQRCLMKNLESLKVNYDCTVRDADGSIIQFQYGEDG 1055

Query: 3222 VDVHKTSFVTKFDTLAANQ-RVLERLGDHFEDAQMKSDDYIKELPEALEQKTKDFLSNLT 3398
            VDVH++SF+ KF  L  NQ  VL+R     ED    S  YI +LP +L++  + F+  + 
Sbjct: 1056 VDVHRSSFIGKFKELTVNQDMVLQRCS---EDMLSGSSSYISDLPISLKKDAEKFVEAMP 1112

Query: 3399 KQQRHSLHLRKRKDFXXXXXXXXXXXXAQPGEPVGVIAAQSVGQPSTQMTLNTFHHAGLG 3578
              +R +    ++++             AQPGEPVGV+AAQSVG+PSTQMTLNTFH AG G
Sbjct: 1113 MNERIASKFVRQEELLKLVKSKYFESLAQPGEPVGVLAAQSVGEPSTQMTLNTFHLAGRG 1172

Query: 3579 AMNVTLGIPRLQEILMRASETIQTPVMTCPLLMGKTWDDAKRLAATLKKVSVADIVESIE 3758
             MNVTLGIPRLQEILM A+  I+TP+MTCPLL GKT +DA  +   L+K++VADI++ +E
Sbjct: 1173 EMNVTLGIPRLQEILMTAAADIKTPIMTCPLLKGKTKEDANDITDKLRKITVADIIKDME 1232

Query: 3759 VCVVPFSVKKHQVSSIYKLKMKLYRPELYPPFSDITLEDCLKTMEVLFVGELEEEIQAHL 3938
            + VVP+++ K+ + SI+KLK+ LY+PE YP  +DIT ED  +TM+V+F+ +LE+ I+ H+
Sbjct: 1233 LSVVPYTIHKNDICSIHKLKINLYKPEHYPKNTDITEEDWEETMKVVFLRKLEDAIEIHM 1292

Query: 3939 IMLSKISGIKNIV--LSAQSGSSKDIDEGDTGSKSQQVGEENDENAG 4073
             ML ++ GI+N V   S  +G+  D D   +G ++    E++D+  G
Sbjct: 1293 KMLHRMRGIRNFVQDTSPTAGNETDNDNSISGKQT----EDDDDGEG 1335


>ref|XP_006402858.1| hypothetical protein EUTSA_v10005738mg [Eutrema salsugineum]
            gi|557103957|gb|ESQ44311.1| hypothetical protein
            EUTSA_v10005738mg [Eutrema salsugineum]
          Length = 1697

 Score = 1426 bits (3691), Expect = 0.0
 Identities = 768/1403 (54%), Positives = 961/1403 (68%), Gaps = 68/1403 (4%)
 Frame = +3

Query: 69   AYTTEGATESVEAVGFSFLTNEEVRTLSFKKITNPILLDNLGRPAPDGLYDPAMGPLEDR 248
            A T EGA++ VE+V FSF+T E+VR  S  K+TNP+LLDN+ RP P GLYDP MGPL+DR
Sbjct: 4    AQTIEGASQVVESVRFSFMTEEDVRKHSVMKVTNPVLLDNVERPVPGGLYDPLMGPLDDR 63

Query: 249  TLCKSCGQRSFQCPGHCGHIDLVSPIYNPLLFRILFNLLQRTCFFCYHFRVNREQVKKCA 428
            T CKSCGQ S  CPGHCGHI+LV PIY+PLLF +L+N LQRTCFFC+HF  N+  V++C 
Sbjct: 64   TSCKSCGQLSLVCPGHCGHIELVYPIYHPLLFNLLYNFLQRTCFFCHHFMANKNDVERCV 123

Query: 429  LQLELIIKGDIVGAKXXXXXXXXXXXXXXXXXRVHVKGLPRQVPNYNSKNLKQHSWTSLQ 608
             QL+LI+KG++V AK                     +    +       ++ +  WTSLQ
Sbjct: 124  SQLKLIMKGNLVAAKQLDSRATDSSE--------ECEDSEMEKERCEDSDMGKQRWTSLQ 175

Query: 609  YSEAMSLLDELMTGQKTECKRCGAKNPKITCPNFGWFH-VNMPNKYTRANIIKGSKLNKL 785
            ++E   L++  +  +   C  C AK PK+  P FGW   V M      AN+I+G K+ K 
Sbjct: 176  FAEVTDLMNTFLRLKSKSCGSCKAKPPKLEKPMFGWVRIVGMSASAIGANVIRGIKVKK- 234

Query: 786  SMGKAKRNSTGEEENANDSSAMGDVDSTDAESSGVVYDGTPDSAQKVKGGYLYPEFLKQK 965
                    S    EN NDS      D +  ++   V DG+    +K K   +  EF K +
Sbjct: 235  --------SASSVENPNDS------DDSGIDALSEVEDGS--EKKKRKSSEVAEEFAKHQ 278

Query: 966  EFFSGPLLPSEVKNHMKLLWENETQLCSLICDIQQERLSISGMKGNYSMFFIEALLVPPI 1145
                  L PSEVK  +K LWENE + CS I D+ Q          +YSMFF+E +LVPP 
Sbjct: 279  NNTRRDLFPSEVKKILKGLWENEHEFCSFIGDLWQSESE----NVDYSMFFLENILVPPT 334

Query: 1146 KFRPPSKGGDSVMEHPQTVLLNKVMYSNISLCNEHMNSSERSKIVPRWFDLQQSINVLFG 1325
            KFR P+KGGDSVMEHPQTV LNKV+ SNISL N   N  ++ KI+ RW +LQ+S+NVLF 
Sbjct: 335  KFRAPTKGGDSVMEHPQTVGLNKVLESNISLGNACTNKLDQPKIISRWMNLQESVNVLF- 393

Query: 1326 NSKTAGLR-ENMATGICQLLEKKEGIFRQKMMGKRVNYACRSVISPDPYLAVNEIGIPPY 1502
            +SKTA ++ +   TGICQ LEKKEG+FRQKMMGKRVN+ACRSVISPDP++AVN+IGIPP 
Sbjct: 394  DSKTATVKSQKEGTGICQTLEKKEGLFRQKMMGKRVNHACRSVISPDPFIAVNDIGIPPC 453

Query: 1503 FALRLTYPERVTPWNVNKLRDAIINGAEVHPGATHYVDKLATVKLPPNRKIRTSISRKLH 1682
            FAL+LTYPERVTPWNV KLR+AIING ++HPGATHY DK++T+KLPP RK R +I+RKL 
Sbjct: 454  FALKLTYPERVTPWNVEKLREAIINGPDIHPGATHYSDKVSTMKLPPTRKARIAIARKLF 513

Query: 1683 SSRGVVAQPGKNLEHELEGKVVYRHLQDGDIVLVNRQPTLHKPSIMAHVVRVLSGEKTLR 1862
            SSRGV  + GK  +   EGKVVYRH+QDGD+VLVNRQPTLHKPSIMAH+VRVL GEKTLR
Sbjct: 514  SSRGVTTELGKTCDVNFEGKVVYRHMQDGDVVLVNRQPTLHKPSIMAHMVRVLKGEKTLR 573

Query: 1863 MHYANCSTYNADFDGDEMNVHFPQDEISRAEAFNIVNANNQYILPTSGEPTRGLI----- 2027
            +HYANCSTYNADFDGDEMNVHFPQDEISRAEA+NIVNANNQY  P++G+P R LI     
Sbjct: 574  LHYANCSTYNADFDGDEMNVHFPQDEISRAEAYNIVNANNQYSRPSNGDPLRALIQVVHP 633

Query: 2028 ---------------------------QDHIVSAVLLTKKDTFLTWEEYNHLLYSSGVSA 2126
                                       QDHIVS+VLLTK+DTFL  +E+N LL+SSGV+ 
Sbjct: 634  SYFFKSLYSFHELGCLPVIFMDLACTQQDHIVSSVLLTKRDTFLDKDEFNQLLFSSGVTD 693

Query: 2127 AARDFFSSKPGQKVSVINSEAEIEPILPAILKPVPMWTGKQVITSLLNHISRTRGFEPLT 2306
                 FS + G+KV    S AE+  + PAILKPVP+WTGKQVIT++LN I  T+G  P +
Sbjct: 694  MVLSSFSGRSGKKVIQSASNAELLTVTPAILKPVPLWTGKQVITAVLNEI--TKGHPPFS 751

Query: 2307 VEKSGKIKKEYFGRKS------------------------------DEANLLIQKNELVH 2396
            VEK+ K+  ++F  +S                              +E  LL++KNE V 
Sbjct: 752  VEKATKLPVDFFKCRSKEVKCKSGESNEKNHLTTKQDFDESWKKDLNEDKLLVRKNEFVR 811

Query: 2397 GVIDKAQFGEYGLVHTVQEFYGSDTAGILLSVLSRLFTVFLQMHGFTCGVDDLLIVQELD 2576
            GVIDKAQF +YGLVHTV E YGS+ AG LLSV SRLFTVFLQ+ GFTCGVDDL+I++++D
Sbjct: 812  GVIDKAQFADYGLVHTVHELYGSNAAGNLLSVFSRLFTVFLQLQGFTCGVDDLIILKDMD 871

Query: 2577 MERMKKLQRSDKIGEEQHAKFIG-AKEGDIDQMELQVEIEKAIRIKGESAITQLDRMMSS 2753
             ER K+LQ  +++GE    K  G A +  ID  +++  IE+ +   GESA+  LDR + +
Sbjct: 872  GERTKQLQECEQVGERVLRKTFGIAVDVQIDPQDMKSRIERILYEDGESALASLDRSVVN 931

Query: 2754 ELNDLTSV-VNSELFPKGLLKPFPKNCLSLMTTSGAKGSLVNFTQISSLLGQQQLEGKRV 2930
            ELN  +S  V ++L   GLLKP  KNC+SLMT SGAKGS VNF QISS LGQQ LEGKRV
Sbjct: 932  ELNQCSSKGVMNDLLSDGLLKPPGKNCISLMTISGAKGSKVNFQQISSHLGQQDLEGKRV 991

Query: 2931 PRMVSGKTLPCFPPWDPASRAGGFITDRFLTGLRPQEYYFHCMAGREGLVDTAVKTSRSG 3110
            PRMVSGKTLPCF PWD + RAGGFI+DRFL+GLRPQEYYFHCMAGREGLVDTAVKTSRSG
Sbjct: 992  PRMVSGKTLPCFHPWDWSPRAGGFISDRFLSGLRPQEYYFHCMAGREGLVDTAVKTSRSG 1051

Query: 3111 YLQRCLVKSLECLKVCYDHTVRDADGSVVQFCYGEDGVDVHKTSFVTKFDTLAANQ-RVL 3287
            YLQRCL+K+LE LKV YD TVRDADGS++QF YGEDGVDVH++SF+ KF  L  NQ  +L
Sbjct: 1052 YLQRCLMKNLESLKVNYDCTVRDADGSIIQFQYGEDGVDVHRSSFIGKFRELTVNQDMIL 1111

Query: 3288 ERLGDHFEDAQMKSDDYIKELPEALEQKTKDFLSNLTKQQRHSLHLRKRKDFXXXXXXXX 3467
            +R     ED    S  YI +LP  L+   + F+  +   +R +  L +++D         
Sbjct: 1112 QRCS---EDMLSGSSSYITDLPITLKNGAEKFVEAMPMNERIASKLVRQEDLLKLVKSKF 1168

Query: 3468 XXXXAQPGEPVGVIAAQSVGQPSTQMTLNTFHHAGLGAMNVTLGIPRLQEILMRASETIQ 3647
                AQPGEPVGV+AAQSVG+PSTQMTLNTFH AG G MNVTLGIPRLQEILM A+  I+
Sbjct: 1169 FASLAQPGEPVGVLAAQSVGEPSTQMTLNTFHLAGRGEMNVTLGIPRLQEILMTAAANIK 1228

Query: 3648 TPVMTCPLLMGKTWDDAKRLAATLKKVSVADIVESIEVCVVPFSVKKHQVSSIYKLKMKL 3827
            TP+MTCPLL GKT DDAK++   L+K++VADI++S+EV V+P++V + +V SI+KLK+KL
Sbjct: 1229 TPIMTCPLLKGKTTDDAKKITDKLRKIAVADIIKSMEVSVIPYAVHEGEVCSIHKLKIKL 1288

Query: 3828 YRPELYPPFSDITLEDCLKTMEVLFVGELEEEIQAHLIMLSKISGIKNIV-LSAQSGSSK 4004
            Y+PE YP  +DIT ED  +TM V+F+ +LE+ I+ H+ ML +I GIK+       SG+  
Sbjct: 1289 YKPEHYPKHTDITDEDWKETMTVMFLRKLEDAIEIHVKMLVRIRGIKSEKDTRPTSGNET 1348

Query: 4005 DIDEGDTGSKSQQVGEENDENAG 4073
            D D+  +G K  +  +++DE  G
Sbjct: 1349 DNDDSVSG-KHTEDDDDDDEGEG 1370


>gb|EYU39881.1| hypothetical protein MIMGU_mgv1a000122mg [Mimulus guttatus]
          Length = 1719

 Score = 1423 bits (3684), Expect = 0.0
 Identities = 769/1400 (54%), Positives = 956/1400 (68%), Gaps = 66/1400 (4%)
 Frame = +3

Query: 75   TTEGATESVEAVGFSFLTNEEVRTLSFKKITNPILLDNLGRPAPDGLYDPAMGPLEDRTL 254
            +TE  TE VEAV F F T+EE R  S  KITNP L+D LG+P P GLYDPAMG L++R++
Sbjct: 3    STECTTEVVEAVRFGFFTDEEARKHSLVKITNPNLVDILGKPCPGGLYDPAMGSLDERSI 62

Query: 255  CKSCGQRSFQCPGHCGHIDLVSPIYNPLLFRILFNLLQRTCFFCYHFRVNREQVKKCALQ 434
            C+SCGQR++ C GHCGHI+LVS  YNPLLF  L N+L +TC +C  F  + E+ +    Q
Sbjct: 63   CESCGQRAYLCNGHCGHIELVSVAYNPLLFNTLSNILNKTCLYCLQFISSAEETENFVSQ 122

Query: 435  LELIIKGDIVGAKXXXXXXXXXXXXXXXXXRVHVKGLPRQVPNYNS-------------- 572
            LELI KGD+ GAK                         R+    +               
Sbjct: 123  LELIRKGDLAGAKKLALGSSFKGKKKMVFVSTDDDTDEREDSQGSHMSHSAVLSDGENHF 182

Query: 573  KNLKQHSWTSLQYSEAMSLLDELMTGQKTECKRCGAKNPKITCPNFGWFHVNMPN--KYT 746
            K+ +Q SW+S Q +EA+S+++E +  +  +C  C  + PKI+ P FGWF V      K  
Sbjct: 183  KDDEQASWSSAQLAEAISVMNEYLRRKGKKCMNCEMRCPKISKPTFGWFQVGGATSAKAI 242

Query: 747  RANIIKGSKLNKLSMGKAKRNSTGEEENANDSSAMGDVDSTDAESSGVVYDGTPDS---- 914
            R N+I+  KL++      + N + E  NA D S   D ++ ++ S     + T  S    
Sbjct: 243  RENVIRSHKLDESDSDGGEDNFSSEVVNAGDHSMNDDSETVESNSFIATSNSTKKSKKKG 302

Query: 915  ---AQKVKGGYLYPEFLKQKEFFSGPLLPSEVKNHMKLLWENETQLCSLICDIQQERLSI 1085
               A+K+  G   P F     + SGPLLPS+V++ +KLLWE E   CS I DIQ+++   
Sbjct: 303  VNRAKKLNPGSGDPNF-----YLSGPLLPSQVRDILKLLWEKEASFCSYISDIQRQKCKP 357

Query: 1086 SGMKGNYSMFFIEALLVPPIKFRPPSKGGDSVMEHPQTVLLNKVMYSNISLCNEHMNSSE 1265
             G K  YSMFF+E +LVPPI+FRPP+KGGDSVMEHPQTVLL KV+ SNI+L N H+N+ E
Sbjct: 358  FGNKTGYSMFFLETVLVPPIRFRPPAKGGDSVMEHPQTVLLGKVLQSNIALGNAHVNA-E 416

Query: 1266 RSKIVPRWFDLQQSINVLFGNSKTAGL-RENMATGICQLLEKKEGIFRQKMMGKRVNYAC 1442
            +SKI+ RW +LQQSINV F +     L +++   GICQ LEKKEGIFRQKMMGKRVN+AC
Sbjct: 417  KSKIISRWMELQQSINVYFDSKTATSLAQKDSIAGICQFLEKKEGIFRQKMMGKRVNFAC 476

Query: 1443 RSVISPDPYLAVNEIGIPPYFALRLTYPERVTPWNVNKLRDAIINGAEVHPGATHYVDKL 1622
            RSVISPDPYLAVNEIGIPPYFAL+LTYPERVTPWN  KLR A++NG ++HPGAT YVD +
Sbjct: 477  RSVISPDPYLAVNEIGIPPYFALKLTYPERVTPWNAAKLRGAVVNGPDIHPGATTYVDSV 536

Query: 1623 ATVKLPPNRKIRTSISRKLHSSRGVVAQPGKNLEHELEGKVVYRHLQDGDIVLVNRQPTL 1802
              VKLPP++K+R +ISRKL SSRGVV Q GK  + E EGK V+RHLQDGDIVLVNRQPTL
Sbjct: 537  TIVKLPPSQKMRVAISRKLPSSRGVVTQSGKFDDLEFEGKTVHRHLQDGDIVLVNRQPTL 596

Query: 1803 HKPSIMAHVVRVLSGEKTLRMHYANCSTYNADFDGDEMNVHFPQDEISRAEAFNIVNANN 1982
            HKPSIMAHVVRVL GE+TLRMHYANCS+YNADFDGDE+NVHFPQDEISRAEA+NIVNAN 
Sbjct: 597  HKPSIMAHVVRVLHGERTLRMHYANCSSYNADFDGDEINVHFPQDEISRAEAYNIVNANE 656

Query: 1983 QYILPTSGEPTRGLIQDHIVSAVLLTKKDTFLTWEEYNHLLYSSGVSAAARDFFSSKPGQ 2162
            QYI+PT G+  RGLIQDHIV AVLLT K+TF+   E+N LLY SGV A+          +
Sbjct: 657  QYIVPTKGDTVRGLIQDHIVGAVLLTMKNTFVNRSEFNQLLYGSGVFASGPGSLPKNNSR 716

Query: 2163 KVSVINSEAEIEPILPAILKPVPMWTGKQVITSLLNHISRTRGFEPLTVEKSGKIKKEYF 2342
            KV++I++E  +E +LPAI KP P+WTGKQVIT+LLNHI  TRG  P TVE  GKI K YF
Sbjct: 717  KVTLIDTEGVVESVLPAIWKPEPLWTGKQVITALLNHI--TRGCAPFTVENQGKIPKNYF 774

Query: 2343 -------GRKSD----EANLLIQKNELVHGVIDKAQFGEYGLVHTVQEFYGSDTAGILLS 2489
                   G + +    E NLL+ KNELV GVIDKAQFG++GLVHTVQE YG+ +AGI LS
Sbjct: 775  FGNSYTRGEEDEDQNAEHNLLVWKNELVRGVIDKAQFGKFGLVHTVQELYGASSAGIFLS 834

Query: 2490 VLSRLFTVFLQMHGFTCGVDDLLIVQELDMERMKKLQRSDKIGEEQHAKFIGAKEGDIDQ 2669
             LSR+FT+FLQ+HGFTCGVDDL+I+ + D +R +KL+  D +GE  H  F+  K G I  
Sbjct: 835  ALSRVFTLFLQIHGFTCGVDDLIILPDYDDQRKEKLEGED-VGEVVHCDFVKFKPGQIGP 893

Query: 2670 MELQVEIEKAIRIKGESAITQLDRMMSSELND-LT---SVVNSELFPKGLLKPFPKNCLS 2837
             ELQ+EIEK I    ESA   LD  M ++LN  LT   S +   L   GLLKPFPKNC+S
Sbjct: 894  DELQLEIEKVICTDRESATASLDMKMKNKLNSKLTREGSQILKHLLTAGLLKPFPKNCIS 953

Query: 2838 LMTTSGAKGSLVNFTQISSLLGQQQLEGKRVPRMVSGKTLPCFPPWDPASRAGGFITDRF 3017
            +MTT+GAKGS VNF QIS+ LGQQ+LEGKRVPRMVSGKTLP FPPWD  SRAGGFITDRF
Sbjct: 954  VMTTTGAKGSTVNFQQISAYLGQQELEGKRVPRMVSGKTLPSFPPWDFTSRAGGFITDRF 1013

Query: 3018 LTGLRPQEYYFHCMAGREGLVDTAVKTSRSGYLQRCLVKSLECLKVCYDHTVRDADGSVV 3197
            LTGLRPQEYYFHCMAGREGLVDTAVKTSRSGYLQRCLVK+LE LKVCYD+TVRDADGS+V
Sbjct: 1014 LTGLRPQEYYFHCMAGREGLVDTAVKTSRSGYLQRCLVKNLESLKVCYDYTVRDADGSIV 1073

Query: 3198 QFCYGEDGVDVHKTSFVTKFDTLAANQRVLERLGDHFEDAQMKSDDYIKELPEALEQKTK 3377
            QF YGEDG+DVH+TSF+  F  L  N+  + +   H    + + + YIK+LPE LE++ K
Sbjct: 1074 QFYYGEDGIDVHRTSFLNNFKALQDNRETICQKFQH----KREFNSYIKKLPEGLEEEAK 1129

Query: 3378 DFL-----SNLTKQQR------HSLHLRKRKD----------------FXXXXXXXXXXX 3476
             F+      +L KQ        HS    ++K+                F           
Sbjct: 1130 RFIQETQNKSLAKQSTSAGEGPHSSRKARKKEKLLKKEKAAAAYEQDAFLELVKQKYLSS 1189

Query: 3477 XAQPGEPVGVIAAQSVGQPSTQMTLNTFHHAGLGAMNVTLGIPRLQEILMRASETIQTPV 3656
             AQ GEPVGVIAAQSVG+PSTQMTLNTFH AG G MNVTLGIPRLQEILM ASE I+TP+
Sbjct: 1190 LAQAGEPVGVIAAQSVGEPSTQMTLNTFHLAGRGEMNVTLGIPRLQEILMSASEVIKTPL 1249

Query: 3657 MTCPLLMGKTWDDAKRLAATLKKVSVADIVESIEVCVVPFSVKKHQVSSIYKLKMKLYRP 3836
            +TCP    ++  +   L + +KKVSVAD++E++E   V  SV     + +YKLKM L   
Sbjct: 1250 LTCPFSQWRSKREVVSLVSHVKKVSVADLIENME---VQLSVNHKTAARVYKLKMTLKDT 1306

Query: 3837 ELYPPFSDITLEDCLKTMEVLFVGELEEEIQAHLIMLSKISGIKNIVLSAQSGSSKDIDE 4016
            E       ++LE+  +T++  F+GELE+ I+ H++ LS++SGIKN   + +  SS + DE
Sbjct: 1307 EF------VSLENMHETLKTTFLGELEDAIENHVLYLSRLSGIKNFASNPKPKSSNEADE 1360

Query: 4017 GDTGSKSQQVGEENDENAGD 4076
             ++G  ++  G  +D++  D
Sbjct: 1361 DESGLGTENAGVNDDDDDDD 1380