BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Akebia27_contig00015397
         (1099 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002282496.1| PREDICTED: putative mediator of RNA polymera...   368   2e-99
emb|CAN68925.1| hypothetical protein VITISV_044247 [Vitis vinifera]   362   2e-97
ref|XP_007217752.1| hypothetical protein PRUPE_ppa010369mg [Prun...   345   2e-92
gb|EYU21430.1| hypothetical protein MIMGU_mgv1a009886mg [Mimulus...   344   4e-92
ref|XP_006372643.1| RNA polymerase transcriptional regulation me...   339   1e-90
ref|XP_007024366.1| RNA polymerase transcriptional regulation me...   338   2e-90
emb|CBI36012.3| unnamed protein product [Vitis vinifera]              330   8e-88
gb|EXB74612.1| Putative mediator of RNA polymerase II transcript...   329   1e-87
ref|XP_006466167.1| PREDICTED: mediator of RNA polymerase II tra...   329   1e-87
ref|XP_006343025.1| PREDICTED: mediator of RNA polymerase II tra...   328   3e-87
ref|XP_004252362.1| PREDICTED: mediator of RNA polymerase II tra...   328   3e-87
ref|XP_006426448.1| hypothetical protein CICLE_v10026335mg [Citr...   327   4e-87
ref|XP_002515912.1| RNA polymerase II mediator complex subunit, ...   327   5e-87
ref|XP_004149176.1| PREDICTED: LOW QUALITY PROTEIN: mediator of ...   327   7e-87
ref|XP_006585556.1| PREDICTED: mediator of RNA polymerase II tra...   324   5e-86
ref|XP_004235630.1| PREDICTED: mediator of RNA polymerase II tra...   321   3e-85
ref|XP_004235629.1| PREDICTED: mediator of RNA polymerase II tra...   321   3e-85
ref|XP_007135611.1| hypothetical protein PHAVU_010G143300g [Phas...   318   2e-84
ref|XP_003531638.1| PREDICTED: mediator of RNA polymerase II tra...   318   2e-84
gb|AFK47538.1| unknown [Medicago truncatula]                          315   3e-83

>ref|XP_002282496.1| PREDICTED: putative mediator of RNA polymerase II transcription
           subunit 6 [Vitis vinifera]
          Length = 258

 Score =  368 bits (945), Expect = 2e-99
 Identities = 188/258 (72%), Positives = 201/258 (77%), Gaps = 2/258 (0%)
 Frame = -3

Query: 809 MAATPMMPQN-LTGNPNFDGNLSAAP-PPGTDMTGICFRDQLWLNSYPLDRNLVFDYFAL 636
           MA+TPM P N   GNPNFDGN  A P PPGTDMTGICFRDQLWLNSYPLDRNLVFDYFAL
Sbjct: 1   MASTPMAPPNPAAGNPNFDGNPPAVPTPPGTDMTGICFRDQLWLNSYPLDRNLVFDYFAL 60

Query: 635 SPFYDLSCNNEQLRMRSIHPLDTTHLSKMTGIEYMLSEVMEPHLFVFRKQKRDGPEKVTP 456
           SPFYD +CNNEQLR+RSIHPLDT+HLSKMTG EYML+EVMEPHLFV RKQKRDGPEKVTP
Sbjct: 61  SPFYDWTCNNEQLRLRSIHPLDTSHLSKMTGTEYMLNEVMEPHLFVIRKQKRDGPEKVTP 120

Query: 455 MLTYYVLDGSIYQAPQLCNVFAARIGRTLYHVSKAFTTAALKSEKIGFVNGENEATAFEP 276
           MLTYY+LDGSIYQAPQLCNVF ARIGR LYH+SKAFTTAA K EKIG+V+ ENE  A E 
Sbjct: 121 MLTYYILDGSIYQAPQLCNVFTARIGRALYHISKAFTTAASKLEKIGYVDAENENPALES 180

Query: 275 KVGKEAIDFKDVKRVDHILASLQRKLXXXXXXXXXXXXXXXXPSEADNIDPDNQQVTAPQ 96
           KVGKE IDFK+V RVD ILASLQRKL                P+      P+ QQ   PQ
Sbjct: 181 KVGKETIDFKEVMRVDQILASLQRKLPPAPPPPQFPEGYAPPPTAEGEKGPETQQAAEPQ 240

Query: 95  LXXXXXXXDQGPAKRMKF 42
           L       DQGP+KRMKF
Sbjct: 241 LPALDPIIDQGPSKRMKF 258


>emb|CAN68925.1| hypothetical protein VITISV_044247 [Vitis vinifera]
          Length = 253

 Score =  362 bits (928), Expect = 2e-97
 Identities = 183/250 (73%), Positives = 195/250 (78%), Gaps = 1/250 (0%)
 Frame = -3

Query: 788 PQNLTGNPNFDGNLSAAP-PPGTDMTGICFRDQLWLNSYPLDRNLVFDYFALSPFYDLSC 612
           P    GNPNFDGN  AAP PPGTDMTGICFRDQLWLNSYPLDRNLVFDYFALSPFYD +C
Sbjct: 4   PNPAAGNPNFDGNPPAAPTPPGTDMTGICFRDQLWLNSYPLDRNLVFDYFALSPFYDWTC 63

Query: 611 NNEQLRMRSIHPLDTTHLSKMTGIEYMLSEVMEPHLFVFRKQKRDGPEKVTPMLTYYVLD 432
           NNEQLR+RSIHPLDT+HLSKMTG EYML+EVMEPHLFV RKQKRDGPEKVTPMLTYY+LD
Sbjct: 64  NNEQLRLRSIHPLDTSHLSKMTGTEYMLNEVMEPHLFVIRKQKRDGPEKVTPMLTYYILD 123

Query: 431 GSIYQAPQLCNVFAARIGRTLYHVSKAFTTAALKSEKIGFVNGENEATAFEPKVGKEAID 252
           GSIYQAPQLCNVF ARIGR LYH+SKAFTTAA K EKIG+V+ ENE  A E KVGKE ID
Sbjct: 124 GSIYQAPQLCNVFTARIGRALYHISKAFTTAASKLEKIGYVDAENENPALESKVGKETID 183

Query: 251 FKDVKRVDHILASLQRKLXXXXXXXXXXXXXXXXPSEADNIDPDNQQVTAPQLXXXXXXX 72
           FK+V RVD ILASLQRKL                P+      P+ QQ   PQL       
Sbjct: 184 FKEVMRVDQILASLQRKLPPAPPAPQFPEGYAPPPTAEGEKGPETQQAAEPQLPALDPII 243

Query: 71  DQGPAKRMKF 42
           DQGP+KRMKF
Sbjct: 244 DQGPSKRMKF 253


>ref|XP_007217752.1| hypothetical protein PRUPE_ppa010369mg [Prunus persica]
           gi|462413902|gb|EMJ18951.1| hypothetical protein
           PRUPE_ppa010369mg [Prunus persica]
          Length = 252

 Score =  345 bits (885), Expect = 2e-92
 Identities = 177/256 (69%), Positives = 192/256 (75%)
 Frame = -3

Query: 809 MAATPMMPQNLTGNPNFDGNLSAAPPPGTDMTGICFRDQLWLNSYPLDRNLVFDYFALSP 630
           MA  PM P ++ G P       A  PPGTDMTGICF+DQLWLNSYPLDRNLVFDYFA+SP
Sbjct: 1   MATPPMAPPSMEGTPP----PMAVQPPGTDMTGICFKDQLWLNSYPLDRNLVFDYFAISP 56

Query: 629 FYDLSCNNEQLRMRSIHPLDTTHLSKMTGIEYMLSEVMEPHLFVFRKQKRDGPEKVTPML 450
           FYD +CNNEQLR RSIHPLD +HLSKMTG EY L+EVMEPHLFVFRKQKRDGPEKVTPML
Sbjct: 57  FYDWTCNNEQLRQRSIHPLDPSHLSKMTGTEYSLNEVMEPHLFVFRKQKRDGPEKVTPML 116

Query: 449 TYYVLDGSIYQAPQLCNVFAARIGRTLYHVSKAFTTAALKSEKIGFVNGENEATAFEPKV 270
           TYYVLDG+IYQAPQLCNVFAARIGR LY++SKAFTTAA K EKIG+V+ ENE  AFE KV
Sbjct: 117 TYYVLDGTIYQAPQLCNVFAARIGRALYYISKAFTTAASKLEKIGYVDSENETAAFESKV 176

Query: 269 GKEAIDFKDVKRVDHILASLQRKLXXXXXXXXXXXXXXXXPSEADNIDPDNQQVTAPQLX 90
            KE IDFK+VKRVDHIL SLQRKL                P+      P+ QQ   PQ  
Sbjct: 177 TKETIDFKEVKRVDHILQSLQRKLPPAPPPPPFPEGYVPAPTAEAENGPETQQAGEPQQP 236

Query: 89  XXXXXXDQGPAKRMKF 42
                 DQGPAKRMKF
Sbjct: 237 QMDPIIDQGPAKRMKF 252


>gb|EYU21430.1| hypothetical protein MIMGU_mgv1a009886mg [Mimulus guttatus]
          Length = 328

 Score =  344 bits (882), Expect = 4e-92
 Identities = 177/262 (67%), Positives = 199/262 (75%), Gaps = 6/262 (2%)
 Frame = -3

Query: 809 MAATPMMPQNLTGNPNFDGN------LSAAPPPGTDMTGICFRDQLWLNSYPLDRNLVFD 648
           MA TPM+P     NP  DG       + A PPPGTDMTGICFRDQLWLN+YPLDRNLVFD
Sbjct: 69  MATTPMIPP-AAANPALDGGAPPPPQMVAPPPPGTDMTGICFRDQLWLNTYPLDRNLVFD 127

Query: 647 YFALSPFYDLSCNNEQLRMRSIHPLDTTHLSKMTGIEYMLSEVMEPHLFVFRKQKRDGPE 468
           YFALSPFYD SCNNEQLR+R+ HPLD +HLSKMTGIEY LSEV+EPHLFVFRKQKRDGPE
Sbjct: 128 YFALSPFYDYSCNNEQLRLRATHPLDLSHLSKMTGIEYSLSEVLEPHLFVFRKQKRDGPE 187

Query: 467 KVTPMLTYYVLDGSIYQAPQLCNVFAARIGRTLYHVSKAFTTAALKSEKIGFVNGENEAT 288
           KVTPMLTYYVLDGSIYQAPQLCNVFA+R+GR LYH+SKAF TAA K EKIG+V+ ENE+T
Sbjct: 188 KVTPMLTYYVLDGSIYQAPQLCNVFASRVGRALYHISKAFNTAASKLEKIGYVDAENEST 247

Query: 287 AFEPKVGKEAIDFKDVKRVDHILASLQRKLXXXXXXXXXXXXXXXXPSEADNIDPDNQQV 108
           + EPK  KE IDFK++KRVDHILASLQRKL                 +E +    D+Q  
Sbjct: 248 SSEPKAAKETIDFKELKRVDHILASLQRKLPPAPPPPPFPDGYAPLSTEGEK-SSDSQ-- 304

Query: 107 TAPQLXXXXXXXDQGPAKRMKF 42
           +A  L       DQGP+KR+KF
Sbjct: 305 SAEPLPPVDPIIDQGPSKRIKF 326


>ref|XP_006372643.1| RNA polymerase transcriptional regulation mediator-related family
           protein [Populus trichocarpa]
           gi|550319272|gb|ERP50440.1| RNA polymerase
           transcriptional regulation mediator-related family
           protein [Populus trichocarpa]
          Length = 259

 Score =  339 bits (870), Expect = 1e-90
 Identities = 175/259 (67%), Positives = 192/259 (74%), Gaps = 3/259 (1%)
 Frame = -3

Query: 809 MAATPMMPQ---NLTGNPNFDGNLSAAPPPGTDMTGICFRDQLWLNSYPLDRNLVFDYFA 639
           MA  P++PQ   N   NP   G      PPGTDMTGICFRDQLWLN+YPLDRNLVFDYFA
Sbjct: 1   MATPPVLPQLPTNFEANPPPMGPTPPQQPPGTDMTGICFRDQLWLNTYPLDRNLVFDYFA 60

Query: 638 LSPFYDLSCNNEQLRMRSIHPLDTTHLSKMTGIEYMLSEVMEPHLFVFRKQKRDGPEKVT 459
           LSPFYD +CNNEQLR +SIHPLD +HL KMTG EYMLSEVMEPHLFVFRKQKRD  EKVT
Sbjct: 61  LSPFYDWTCNNEQLRSQSIHPLDLSHLLKMTGTEYMLSEVMEPHLFVFRKQKRDSAEKVT 120

Query: 458 PMLTYYVLDGSIYQAPQLCNVFAARIGRTLYHVSKAFTTAALKSEKIGFVNGENEATAFE 279
           PMLTYYVLDGSIYQAPQLC+VFAAR+GR LY++SKAF TAA K EKIG+V+ ENE  A E
Sbjct: 121 PMLTYYVLDGSIYQAPQLCSVFAARVGRALYYISKAFGTAASKLEKIGYVDSENEGAASE 180

Query: 278 PKVGKEAIDFKDVKRVDHILASLQRKLXXXXXXXXXXXXXXXXPSEADNIDPDNQQVTAP 99
            K GKE IDFK+VKR+DHILASLQRKL                P+  +   P+ QQ   P
Sbjct: 181 SKTGKEVIDFKEVKRIDHILASLQRKLPPAPPPPSFPEGYVPQPTTEEEKGPETQQGGEP 240

Query: 98  QLXXXXXXXDQGPAKRMKF 42
           QL       DQGPAKRMKF
Sbjct: 241 QLPSVDPIIDQGPAKRMKF 259


>ref|XP_007024366.1| RNA polymerase transcriptional regulation mediator-related isoform
           1 [Theobroma cacao] gi|508779732|gb|EOY26988.1| RNA
           polymerase transcriptional regulation mediator-related
           isoform 1 [Theobroma cacao]
          Length = 257

 Score =  338 bits (867), Expect = 2e-90
 Identities = 172/257 (66%), Positives = 190/257 (73%), Gaps = 1/257 (0%)
 Frame = -3

Query: 809 MAATPMMPQNLTGNPNFDGNLSAA-PPPGTDMTGICFRDQLWLNSYPLDRNLVFDYFALS 633
           MA  P+ P       NF+        PPGTDMTGICFRDQLWLN+YPLDRNL+FDYFALS
Sbjct: 1   MATPPVAPPQAAAAGNFEAPPPLPMQPPGTDMTGICFRDQLWLNTYPLDRNLIFDYFALS 60

Query: 632 PFYDLSCNNEQLRMRSIHPLDTTHLSKMTGIEYMLSEVMEPHLFVFRKQKRDGPEKVTPM 453
           PFYD +CNNEQLRM SIHPLD + LSKMTG+EYMLSEVMEP+LFV RKQKRDGPEKVTPM
Sbjct: 61  PFYDWTCNNEQLRMHSIHPLDISQLSKMTGVEYMLSEVMEPNLFVIRKQKRDGPEKVTPM 120

Query: 452 LTYYVLDGSIYQAPQLCNVFAARIGRTLYHVSKAFTTAALKSEKIGFVNGENEATAFEPK 273
           L YY+LDGSIYQAPQLCNVFAAR+GR LY++SKAFTTAA K EKIG+V+ ENE+  FE K
Sbjct: 121 LAYYILDGSIYQAPQLCNVFAARVGRALYYISKAFTTAASKLEKIGYVDTENESETFESK 180

Query: 272 VGKEAIDFKDVKRVDHILASLQRKLXXXXXXXXXXXXXXXXPSEADNIDPDNQQVTAPQL 93
            GKE IDFK+VKRVDHILASLQRKL                 +     DP+NQQ    Q 
Sbjct: 181 GGKETIDFKEVKRVDHILASLQRKLPPAPPPPPFPEGFIPLATAEAEKDPENQQAVETQP 240

Query: 92  XXXXXXXDQGPAKRMKF 42
                  DQGPAKRMKF
Sbjct: 241 PAIDPIIDQGPAKRMKF 257


>emb|CBI36012.3| unnamed protein product [Vitis vinifera]
          Length = 226

 Score =  330 bits (845), Expect = 8e-88
 Identities = 166/226 (73%), Positives = 178/226 (78%)
 Frame = -3

Query: 719 MTGICFRDQLWLNSYPLDRNLVFDYFALSPFYDLSCNNEQLRMRSIHPLDTTHLSKMTGI 540
           MTGICFRDQLWLNSYPLDRNLVFDYFALSPFYD +CNNEQLR+RSIHPLDT+HLSKMTG 
Sbjct: 1   MTGICFRDQLWLNSYPLDRNLVFDYFALSPFYDWTCNNEQLRLRSIHPLDTSHLSKMTGT 60

Query: 539 EYMLSEVMEPHLFVFRKQKRDGPEKVTPMLTYYVLDGSIYQAPQLCNVFAARIGRTLYHV 360
           EYML+EVMEPHLFV RKQKRDGPEKVTPMLTYY+LDGSIYQAPQLCNVF ARIGR LYH+
Sbjct: 61  EYMLNEVMEPHLFVIRKQKRDGPEKVTPMLTYYILDGSIYQAPQLCNVFTARIGRALYHI 120

Query: 359 SKAFTTAALKSEKIGFVNGENEATAFEPKVGKEAIDFKDVKRVDHILASLQRKLXXXXXX 180
           SKAFTTAA K EKIG+V+ ENE  A E KVGKE IDFK+V RVD ILASLQRKL      
Sbjct: 121 SKAFTTAASKLEKIGYVDAENENPALESKVGKETIDFKEVMRVDQILASLQRKLPPAPPP 180

Query: 179 XXXXXXXXXXPSEADNIDPDNQQVTAPQLXXXXXXXDQGPAKRMKF 42
                     P+      P+ QQ   PQL       DQGP+KRMKF
Sbjct: 181 PQFPEGYAPPPTAEGEKGPETQQAAEPQLPALDPIIDQGPSKRMKF 226


>gb|EXB74612.1| Putative mediator of RNA polymerase II transcription subunit 6
           [Morus notabilis]
          Length = 251

 Score =  329 bits (843), Expect = 1e-87
 Identities = 166/245 (67%), Positives = 184/245 (75%), Gaps = 1/245 (0%)
 Frame = -3

Query: 773 GNPNFDGNLSAAPPP-GTDMTGICFRDQLWLNSYPLDRNLVFDYFALSPFYDLSCNNEQL 597
           G P  +G   A PPP GTDMTGICFRDQLWLNS+PLDRNLVFDYFALSPFYD +CNNEQL
Sbjct: 7   GAPGMEGRPPAPPPPPGTDMTGICFRDQLWLNSFPLDRNLVFDYFALSPFYDWTCNNEQL 66

Query: 596 RMRSIHPLDTTHLSKMTGIEYMLSEVMEPHLFVFRKQKRDGPEKVTPMLTYYVLDGSIYQ 417
           RMRSIHPLD THLSKMTG EYML+EV+EP+LFV RKQKRDGPEKVTPMLTYYVLDGSIYQ
Sbjct: 67  RMRSIHPLDLTHLSKMTGTEYMLNEVLEPNLFVIRKQKRDGPEKVTPMLTYYVLDGSIYQ 126

Query: 416 APQLCNVFAARIGRTLYHVSKAFTTAALKSEKIGFVNGENEATAFEPKVGKEAIDFKDVK 237
           APQLCNVFAAR GR LY++ KAFT AA K EKIG+V+ ENE    + K+GKE IDFK++K
Sbjct: 127 APQLCNVFAARAGRALYYLQKAFTNAASKLEKIGYVDSENENAPLDSKIGKETIDFKEMK 186

Query: 236 RVDHILASLQRKLXXXXXXXXXXXXXXXXPSEADNIDPDNQQVTAPQLXXXXXXXDQGPA 57
           R+DHILASLQRKL                 +      P+ QQ    Q        DQGPA
Sbjct: 187 RIDHILASLQRKLPPAPPPPPFPEGYVPPQNADSEKGPEAQQAGEAQQAPVDPIIDQGPA 246

Query: 56  KRMKF 42
           KRM+F
Sbjct: 247 KRMRF 251


>ref|XP_006466167.1| PREDICTED: mediator of RNA polymerase II transcription subunit
           6-like [Citrus sinensis]
          Length = 251

 Score =  329 bits (843), Expect = 1e-87
 Identities = 171/254 (67%), Positives = 187/254 (73%), Gaps = 1/254 (0%)
 Frame = -3

Query: 803 ATPMMPQNLTGNPNFDGNLSAAPPPGTDMTGICFRDQLWLNSYPLDRNLVFDYFALSPFY 624
           ATP    NL G P      +A PPPGTDMTGICFRDQLWLN+YPLDRN++FDYF LS FY
Sbjct: 2   ATPPPGTNLEGAPP-----AAPPPPGTDMTGICFRDQLWLNTYPLDRNMIFDYFTLSLFY 56

Query: 623 DLSCNNEQLRMRSIHPLDTTHLSKMTGIEYMLSEVMEPHLFVFRKQKRDGPEKVTPMLTY 444
           D +CNNEQLRMRSIHPLD + LSKMTGIEYMLSEVMEPHLFV RKQKRDGPEKVTPMLTY
Sbjct: 57  DRTCNNEQLRMRSIHPLDISQLSKMTGIEYMLSEVMEPHLFVIRKQKRDGPEKVTPMLTY 116

Query: 443 YVLDGSIYQAPQLCNVFAARIGRTLYHVSKAFTTAALKSEKIGFVNGENE-ATAFEPKVG 267
           YVLDGSIYQAPQLCNVF+ARIGR L+++ KAFTTAA K EKIG+V+ EN+  T    K G
Sbjct: 117 YVLDGSIYQAPQLCNVFSARIGRALHYIQKAFTTAASKLEKIGYVDAENDGGTPLHSKAG 176

Query: 266 KEAIDFKDVKRVDHILASLQRKLXXXXXXXXXXXXXXXXPSEADNIDPDNQQVTAPQLXX 87
           KE ID K+VKRVD ILASLQRKL                 +E    DP+ QQ   PQ   
Sbjct: 177 KETIDLKEVKRVDQILASLQRKLPPAPPPPPFPEGYAPPQTEEAEKDPETQQTAEPQPPA 236

Query: 86  XXXXXDQGPAKRMK 45
                DQGPAKRMK
Sbjct: 237 IDPIIDQGPAKRMK 250


>ref|XP_006343025.1| PREDICTED: mediator of RNA polymerase II transcription subunit
           6-like [Solanum tuberosum]
          Length = 247

 Score =  328 bits (840), Expect = 3e-87
 Identities = 170/256 (66%), Positives = 191/256 (74%), Gaps = 1/256 (0%)
 Frame = -3

Query: 809 MAATPMMPQNLTGNPNFDGNLSAAPP-PGTDMTGICFRDQLWLNSYPLDRNLVFDYFALS 633
           MA+TPMMP      PN DG+  AAPP PGTDMT ICFRDQLWLN+YPLDRNLVFDYFALS
Sbjct: 1   MASTPMMP------PNADGSAPAAPPLPGTDMTSICFRDQLWLNTYPLDRNLVFDYFALS 54

Query: 632 PFYDLSCNNEQLRMRSIHPLDTTHLSKMTGIEYMLSEVMEPHLFVFRKQKRDGPEKVTPM 453
           PFYD +CNNEQLR R+IHPLD +H+SKMTG+EY LSEVMEP+LFV RKQKRD PEKVTPM
Sbjct: 55  PFYDWTCNNEQLRARAIHPLDFSHISKMTGMEYTLSEVMEPNLFVIRKQKRDSPEKVTPM 114

Query: 452 LTYYVLDGSIYQAPQLCNVFAARIGRTLYHVSKAFTTAALKSEKIGFVNGENEATAFEPK 273
           LTYY+LDGSIYQAPQLCNVFAAR+GR LYH+SKAF TA+ K EKIG+V  EN++ A E K
Sbjct: 115 LTYYILDGSIYQAPQLCNVFAARLGRALYHISKAFGTASSKLEKIGYVESENDSQASETK 174

Query: 272 VGKEAIDFKDVKRVDHILASLQRKLXXXXXXXXXXXXXXXXPSEADNIDPDNQQVTAPQL 93
             KEAIDFK++KRVDHILASLQRKL                 +     +P   Q    Q 
Sbjct: 175 PAKEAIDFKELKRVDHILASLQRKL----PPVPPPPPFPEGYAPPSTSEPSENQQPETQP 230

Query: 92  XXXXXXXDQGPAKRMK 45
                  DQGP+KRMK
Sbjct: 231 PPIDPIIDQGPSKRMK 246


>ref|XP_004252362.1| PREDICTED: mediator of RNA polymerase II transcription subunit
           6-like isoform 1 [Solanum lycopersicum]
          Length = 251

 Score =  328 bits (840), Expect = 3e-87
 Identities = 172/256 (67%), Positives = 192/256 (75%), Gaps = 1/256 (0%)
 Frame = -3

Query: 809 MAATPMMPQNLTGNPNFDGNLSAAPP-PGTDMTGICFRDQLWLNSYPLDRNLVFDYFALS 633
           M  TP+M     GN NFDG   A PP PGTDMTGICFRDQLWLN+YPLDRNLVFDYFALS
Sbjct: 1   MTMTPVMAP--MGNANFDGGAPALPPQPGTDMTGICFRDQLWLNTYPLDRNLVFDYFALS 58

Query: 632 PFYDLSCNNEQLRMRSIHPLDTTHLSKMTGIEYMLSEVMEPHLFVFRKQKRDGPEKVTPM 453
           PFYD +CNNEQLR RSIHPLDT+HLSKMTG EYMLSEVMEP+LFV RKQKRDGPEKVTPM
Sbjct: 59  PFYDWTCNNEQLRSRSIHPLDTSHLSKMTGSEYMLSEVMEPNLFVIRKQKRDGPEKVTPM 118

Query: 452 LTYYVLDGSIYQAPQLCNVFAARIGRTLYHVSKAFTTAALKSEKIGFVNGENEATAFEPK 273
           LTYY+LDGSIYQAPQLCNVFA R+GR LYH+SKAF+ A+ K EK G+V  ENE+ A EPK
Sbjct: 119 LTYYILDGSIYQAPQLCNVFAGRLGRALYHISKAFSFASSKLEKTGYVASENESAASEPK 178

Query: 272 VGKEAIDFKDVKRVDHILASLQRKLXXXXXXXXXXXXXXXXPSEADNIDPDNQQVTAPQL 93
             KE IDFK++KRVDHI ASLQR L                PS A+  + + ++    QL
Sbjct: 179 AAKETIDFKELKRVDHIFASLQRTL-PPVPPPPPFPEGYVPPSTAEASENEQEET---QL 234

Query: 92  XXXXXXXDQGPAKRMK 45
                  DQGP+KRMK
Sbjct: 235 PPVDPIIDQGPSKRMK 250


>ref|XP_006426448.1| hypothetical protein CICLE_v10026335mg [Citrus clementina]
           gi|557528438|gb|ESR39688.1| hypothetical protein
           CICLE_v10026335mg [Citrus clementina]
          Length = 251

 Score =  327 bits (839), Expect = 4e-87
 Identities = 170/254 (66%), Positives = 187/254 (73%), Gaps = 1/254 (0%)
 Frame = -3

Query: 803 ATPMMPQNLTGNPNFDGNLSAAPPPGTDMTGICFRDQLWLNSYPLDRNLVFDYFALSPFY 624
           ATP    NL G P      +A PPPGTDMTGICFRDQLWLN+YPLDRN++FDYF LS FY
Sbjct: 2   ATPPPGANLEGAPP-----AAPPPPGTDMTGICFRDQLWLNTYPLDRNMIFDYFTLSLFY 56

Query: 623 DLSCNNEQLRMRSIHPLDTTHLSKMTGIEYMLSEVMEPHLFVFRKQKRDGPEKVTPMLTY 444
           D +CNNEQLRMRSIHPLD + LSKMTGIEYMLSEVMEPHLFV RKQKRDGPEKVTPMLTY
Sbjct: 57  DRTCNNEQLRMRSIHPLDISQLSKMTGIEYMLSEVMEPHLFVIRKQKRDGPEKVTPMLTY 116

Query: 443 YVLDGSIYQAPQLCNVFAARIGRTLYHVSKAFTTAALKSEKIGFVNGENE-ATAFEPKVG 267
           YVLDGSIYQAPQLCNVF+ARIGR L+++ KAFTTAA K EKIG+V+ EN+  T    K G
Sbjct: 117 YVLDGSIYQAPQLCNVFSARIGRALHYIQKAFTTAASKLEKIGYVDAENDGGTPLHSKAG 176

Query: 266 KEAIDFKDVKRVDHILASLQRKLXXXXXXXXXXXXXXXXPSEADNIDPDNQQVTAPQLXX 87
           KE ID K+VKRVD ILASLQRKL                 +E    DP+ QQ   PQ   
Sbjct: 177 KETIDLKEVKRVDQILASLQRKLPPAPPPPPFPEGYAPPQTEEAEKDPETQQTAEPQPPA 236

Query: 86  XXXXXDQGPAKRMK 45
                DQGPAKR+K
Sbjct: 237 IDPIIDQGPAKRVK 250


>ref|XP_002515912.1| RNA polymerase II mediator complex subunit, putative [Ricinus
           communis] gi|223544817|gb|EEF46332.1| RNA polymerase II
           mediator complex subunit, putative [Ricinus communis]
          Length = 251

 Score =  327 bits (838), Expect = 5e-87
 Identities = 169/244 (69%), Positives = 188/244 (77%), Gaps = 3/244 (1%)
 Frame = -3

Query: 764 NFDGN-LSAAPP--PGTDMTGICFRDQLWLNSYPLDRNLVFDYFALSPFYDLSCNNEQLR 594
           NFDGN L+ APP  PGTDMTGICFRDQLWLN+YPLDRNL+FDYFALSPFYD +CNNEQLR
Sbjct: 9   NFDGNPLAPAPPQPPGTDMTGICFRDQLWLNTYPLDRNLIFDYFALSPFYDWTCNNEQLR 68

Query: 593 MRSIHPLDTTHLSKMTGIEYMLSEVMEPHLFVFRKQKRDGPEKVTPMLTYYVLDGSIYQA 414
           ++SIHPLD +HLSKMTG EYML+EV+EP+LFV RKQKRD PEKVTPMLTYYVLDGSIYQA
Sbjct: 69  LQSIHPLDLSHLSKMTGTEYMLNEVIEPNLFVIRKQKRDSPEKVTPMLTYYVLDGSIYQA 128

Query: 413 PQLCNVFAARIGRTLYHVSKAFTTAALKSEKIGFVNGENEATAFEPKVGKEAIDFKDVKR 234
           PQLCNVFAARIGR LYH+SKAFTTAA K EKIG+V+ E E  A E KVGKE IDFK+VKR
Sbjct: 129 PQLCNVFAARIGRALYHISKAFTTAASKLEKIGYVD-EGEGVASESKVGKEVIDFKEVKR 187

Query: 233 VDHILASLQRKLXXXXXXXXXXXXXXXXPSEADNIDPDNQQVTAPQLXXXXXXXDQGPAK 54
           +DHILAS+QRKL                 +       + +Q    Q        DQGPAK
Sbjct: 188 IDHILASIQRKLPPAPPPPPFPEGYVPPATVEAEKGSETRQAVETQPPPVDPIIDQGPAK 247

Query: 53  RMKF 42
           RMKF
Sbjct: 248 RMKF 251


>ref|XP_004149176.1| PREDICTED: LOW QUALITY PROTEIN: mediator of RNA polymerase II
           transcription subunit 6-like [Cucumis sativus]
          Length = 260

 Score =  327 bits (837), Expect = 7e-87
 Identities = 176/259 (67%), Positives = 195/259 (75%), Gaps = 5/259 (1%)
 Frame = -3

Query: 803 ATPMMPQNLTGNPNFDGN-LSAAP-PPGTDMT---GICFRDQLWLNSYPLDRNLVFDYFA 639
           ATP  P    G  NF+G  L AAP PPGTDMT   GICFRDQLWLN+YPLDRNLVFDYFA
Sbjct: 2   ATPPPPTAPPGTGNFEGGPLPAAPQPPGTDMTNLPGICFRDQLWLNTYPLDRNLVFDYFA 61

Query: 638 LSPFYDLSCNNEQLRMRSIHPLDTTHLSKMTGIEYMLSEVMEPHLFVFRKQKRDGPEKVT 459
           LSPFYD +CNNEQLRMRSIHPLD + LSKMTGIEYML+EVMEPHLFVFRKQKRDGPEKVT
Sbjct: 62  LSPFYDWTCNNEQLRMRSIHPLDLSQLSKMTGIEYMLNEVMEPHLFVFRKQKRDGPEKVT 121

Query: 458 PMLTYYVLDGSIYQAPQLCNVFAARIGRTLYHVSKAFTTAALKSEKIGFVNGENEATAFE 279
           PMLTYY+LDGSIYQAPQLC+VFAAR+ R LY++SKAFTTA+ K EKIG+V+ ENE+   E
Sbjct: 122 PMLTYYILDGSIYQAPQLCSVFAARVSRALYYISKAFTTASSKLEKIGYVDSENESE--E 179

Query: 278 PKVGKEAIDFKDVKRVDHILASLQRKLXXXXXXXXXXXXXXXXPSEADNIDPDNQQVTAP 99
            K  KE I+FK+VKRVDHILASLQRKL                 +      P+NQQ  + 
Sbjct: 180 VKPAKETINFKEVKRVDHILASLQRKLPPAPPPPPFPEGYAPAATAETEKGPENQQGESQ 239

Query: 98  QLXXXXXXXDQGPAKRMKF 42
           Q        DQGPAKRMKF
Sbjct: 240 Q-PSADPIIDQGPAKRMKF 257


>ref|XP_006585556.1| PREDICTED: mediator of RNA polymerase II transcription subunit
           6-like isoform X2 [Glycine max]
          Length = 249

 Score =  324 bits (830), Expect = 5e-86
 Identities = 164/244 (67%), Positives = 178/244 (72%)
 Frame = -3

Query: 773 GNPNFDGNLSAAPPPGTDMTGICFRDQLWLNSYPLDRNLVFDYFALSPFYDLSCNNEQLR 594
           GN   +G   A  PPGTDMTGICFRDQLWLNS+PLDRNLVFDYFALSPFYD +CNNEQLR
Sbjct: 6   GNQMLEGGGGAPQPPGTDMTGICFRDQLWLNSFPLDRNLVFDYFALSPFYDWTCNNEQLR 65

Query: 593 MRSIHPLDTTHLSKMTGIEYMLSEVMEPHLFVFRKQKRDGPEKVTPMLTYYVLDGSIYQA 414
           MRS+HPLD + LSKMTG EYMLSEVMEPHLFV RKQKRD P+KVTPML YYVLDGSIYQA
Sbjct: 66  MRSVHPLDISQLSKMTGTEYMLSEVMEPHLFVIRKQKRDSPDKVTPMLAYYVLDGSIYQA 125

Query: 413 PQLCNVFAARIGRTLYHVSKAFTTAALKSEKIGFVNGENEATAFEPKVGKEAIDFKDVKR 234
           PQLCNVFAARIGR LY++ KAFTTAA K EKIG+ + ENE    E K  KE ID K+VKR
Sbjct: 126 PQLCNVFAARIGRALYYIQKAFTTAASKLEKIGYADSENETALLESKTAKETIDIKEVKR 185

Query: 233 VDHILASLQRKLXXXXXXXXXXXXXXXXPSEADNIDPDNQQVTAPQLXXXXXXXDQGPAK 54
           VDHILASLQRKL                P+       + Q+    Q        DQGPAK
Sbjct: 186 VDHILASLQRKLPPAPPPPPFPEGYVPPPTAETEKGTETQEAAETQAPTADPIIDQGPAK 245

Query: 53  RMKF 42
           RMKF
Sbjct: 246 RMKF 249


>ref|XP_004235630.1| PREDICTED: mediator of RNA polymerase II transcription subunit
           6-like isoform 2 [Solanum lycopersicum]
          Length = 247

 Score =  321 bits (823), Expect = 3e-85
 Identities = 167/256 (65%), Positives = 188/256 (73%), Gaps = 1/256 (0%)
 Frame = -3

Query: 809 MAATPMMPQNLTGNPNFDGNLSAAPP-PGTDMTGICFRDQLWLNSYPLDRNLVFDYFALS 633
           MA+TPMMP N       DG+   APP PGTDMT ICFRDQLWLN+YPLD+NLVFDYFALS
Sbjct: 1   MASTPMMPLNA------DGSAPVAPPLPGTDMTSICFRDQLWLNTYPLDKNLVFDYFALS 54

Query: 632 PFYDLSCNNEQLRMRSIHPLDTTHLSKMTGIEYMLSEVMEPHLFVFRKQKRDGPEKVTPM 453
           PFYD +CNNEQLR R+IHPLD +H+SKMTG+EY LSEVMEP+LFV RKQKRD PEKVTPM
Sbjct: 55  PFYDWTCNNEQLRARAIHPLDFSHISKMTGMEYTLSEVMEPNLFVIRKQKRDSPEKVTPM 114

Query: 452 LTYYVLDGSIYQAPQLCNVFAARIGRTLYHVSKAFTTAALKSEKIGFVNGENEATAFEPK 273
           LTYY+LDGSIYQAPQLCNVFAAR+GR LYH+SKAF TA+ K EKIG+V  EN + A E K
Sbjct: 115 LTYYILDGSIYQAPQLCNVFAARLGRALYHISKAFGTASSKLEKIGYVESENNSQASETK 174

Query: 272 VGKEAIDFKDVKRVDHILASLQRKLXXXXXXXXXXXXXXXXPSEADNIDPDNQQVTAPQL 93
             KEAIDFK++KRVDHILASLQRKL                 +     +P   Q    Q 
Sbjct: 175 PAKEAIDFKELKRVDHILASLQRKL----PAVPLPPPLPEGYAPPSTSEPSENQQPETQP 230

Query: 92  XXXXXXXDQGPAKRMK 45
                  DQGP+KRMK
Sbjct: 231 PPIDPIIDQGPSKRMK 246


>ref|XP_004235629.1| PREDICTED: mediator of RNA polymerase II transcription subunit
           6-like isoform 1 [Solanum lycopersicum]
          Length = 248

 Score =  321 bits (823), Expect = 3e-85
 Identities = 167/256 (65%), Positives = 188/256 (73%), Gaps = 1/256 (0%)
 Frame = -3

Query: 809 MAATPMMPQNLTGNPNFDGNLSAAPP-PGTDMTGICFRDQLWLNSYPLDRNLVFDYFALS 633
           MA+TPMMP N       DG+   APP PGTDMT ICFRDQLWLN+YPLD+NLVFDYFALS
Sbjct: 1   MASTPMMPLNA------DGSAPVAPPLPGTDMTSICFRDQLWLNTYPLDKNLVFDYFALS 54

Query: 632 PFYDLSCNNEQLRMRSIHPLDTTHLSKMTGIEYMLSEVMEPHLFVFRKQKRDGPEKVTPM 453
           PFYD +CNNEQLR R+IHPLD +H+SKMTG+EY LSEVMEP+LFV RKQKRD PEKVTPM
Sbjct: 55  PFYDWTCNNEQLRARAIHPLDFSHISKMTGMEYTLSEVMEPNLFVIRKQKRDSPEKVTPM 114

Query: 452 LTYYVLDGSIYQAPQLCNVFAARIGRTLYHVSKAFTTAALKSEKIGFVNGENEATAFEPK 273
           LTYY+LDGSIYQAPQLCNVFAAR+GR LYH+SKAF TA+ K EKIG+V  EN + A E K
Sbjct: 115 LTYYILDGSIYQAPQLCNVFAARLGRALYHISKAFGTASSKLEKIGYVESENNSQASETK 174

Query: 272 VGKEAIDFKDVKRVDHILASLQRKLXXXXXXXXXXXXXXXXPSEADNIDPDNQQVTAPQL 93
             KEAIDFK++KRVDHILASLQRKL                 +     +P   Q    Q 
Sbjct: 175 PAKEAIDFKELKRVDHILASLQRKL----PAVPLPPPLPEGYAPPSTSEPSENQQPETQP 230

Query: 92  XXXXXXXDQGPAKRMK 45
                  DQGP+KRMK
Sbjct: 231 PPIDPIIDQGPSKRMK 246


>ref|XP_007135611.1| hypothetical protein PHAVU_010G143300g [Phaseolus vulgaris]
           gi|561008656|gb|ESW07605.1| hypothetical protein
           PHAVU_010G143300g [Phaseolus vulgaris]
          Length = 247

 Score =  318 bits (816), Expect = 2e-84
 Identities = 164/244 (67%), Positives = 178/244 (72%)
 Frame = -3

Query: 773 GNPNFDGNLSAAPPPGTDMTGICFRDQLWLNSYPLDRNLVFDYFALSPFYDLSCNNEQLR 594
           GN   +G     P PGTDMTGICFRDQLWLNS+PLDRNLVFDYFALSPFYD +CNNEQLR
Sbjct: 6   GNQMMEGG--PPPLPGTDMTGICFRDQLWLNSFPLDRNLVFDYFALSPFYDWTCNNEQLR 63

Query: 593 MRSIHPLDTTHLSKMTGIEYMLSEVMEPHLFVFRKQKRDGPEKVTPMLTYYVLDGSIYQA 414
           MRS+HPLD + LSKMTG EYMLSEVMEPHLFV RKQKRD P+KVTPML YYVLDGSIYQA
Sbjct: 64  MRSVHPLDLSQLSKMTGTEYMLSEVMEPHLFVIRKQKRDSPDKVTPMLAYYVLDGSIYQA 123

Query: 413 PQLCNVFAARIGRTLYHVSKAFTTAALKSEKIGFVNGENEATAFEPKVGKEAIDFKDVKR 234
           PQLCNVFAARIGR LY++ KAFTTAA K EKIG+V+ ENE    E K  KE ID K+VKR
Sbjct: 124 PQLCNVFAARIGRALYYIQKAFTTAASKLEKIGYVDSENETALVESKTAKETIDIKEVKR 183

Query: 233 VDHILASLQRKLXXXXXXXXXXXXXXXXPSEADNIDPDNQQVTAPQLXXXXXXXDQGPAK 54
           VDHILASLQRKL                P+       + Q+    Q        DQGPAK
Sbjct: 184 VDHILASLQRKLPPAPPPPPFPEGYVPPPTAEAEKGTETQEAAETQAPTADPIIDQGPAK 243

Query: 53  RMKF 42
           RMKF
Sbjct: 244 RMKF 247


>ref|XP_003531638.1| PREDICTED: mediator of RNA polymerase II transcription subunit
           6-like isoform X1 [Glycine max]
          Length = 252

 Score =  318 bits (816), Expect = 2e-84
 Identities = 164/247 (66%), Positives = 178/247 (72%), Gaps = 3/247 (1%)
 Frame = -3

Query: 773 GNPNFDGNLSAAPPPGTDMTGICFRDQLWLNSYPLDRNLVFDYFALSPFYDLSCNNEQLR 594
           GN   +G   A  PPGTDMTGICFRDQLWLNS+PLDRNLVFDYFALSPFYD +CNNEQLR
Sbjct: 6   GNQMLEGGGGAPQPPGTDMTGICFRDQLWLNSFPLDRNLVFDYFALSPFYDWTCNNEQLR 65

Query: 593 MRSIHPLDTTHLSKMTGIEYMLSEVMEPHLFVFRKQKRDGPEKVTPMLTYYVLDGSIYQA 414
           MRS+HPLD + LSKMTG EYMLSEVMEPHLFV RKQKRD P+KVTPML YYVLDGSIYQA
Sbjct: 66  MRSVHPLDISQLSKMTGTEYMLSEVMEPHLFVIRKQKRDSPDKVTPMLAYYVLDGSIYQA 125

Query: 413 PQLCNVFAARIGRTLYHVSKAFTTAALKSEKIGF---VNGENEATAFEPKVGKEAIDFKD 243
           PQLCNVFAARIGR LY++ KAFTTAA K EKIG+    + ENE    E K  KE ID K+
Sbjct: 126 PQLCNVFAARIGRALYYIQKAFTTAASKLEKIGYAGSADSENETALLESKTAKETIDIKE 185

Query: 242 VKRVDHILASLQRKLXXXXXXXXXXXXXXXXPSEADNIDPDNQQVTAPQLXXXXXXXDQG 63
           VKRVDHILASLQRKL                P+       + Q+    Q        DQG
Sbjct: 186 VKRVDHILASLQRKLPPAPPPPPFPEGYVPPPTAETEKGTETQEAAETQAPTADPIIDQG 245

Query: 62  PAKRMKF 42
           PAKRMKF
Sbjct: 246 PAKRMKF 252


>gb|AFK47538.1| unknown [Medicago truncatula]
          Length = 248

 Score =  315 bits (806), Expect = 3e-83
 Identities = 157/239 (65%), Positives = 178/239 (74%)
 Frame = -3

Query: 758 DGNLSAAPPPGTDMTGICFRDQLWLNSYPLDRNLVFDYFALSPFYDLSCNNEQLRMRSIH 579
           DG +  A PPGTDMTGICFRDQLWLN+YPLDR+LVFDYFALSPFYD + NNEQLRMRS H
Sbjct: 10  DGGVPTAQPPGTDMTGICFRDQLWLNTYPLDRDLVFDYFALSPFYDWTSNNEQLRMRSHH 69

Query: 578 PLDTTHLSKMTGIEYMLSEVMEPHLFVFRKQKRDGPEKVTPMLTYYVLDGSIYQAPQLCN 399
           PLD++ L+KM GIEY+LSEVMEPHLF+ +KQKRD P+KVTPML YY+LDGSIYQAPQL N
Sbjct: 70  PLDSSQLTKMIGIEYVLSEVMEPHLFIMKKQKRDSPDKVTPMLAYYILDGSIYQAPQLSN 129

Query: 398 VFAARIGRTLYHVSKAFTTAALKSEKIGFVNGENEATAFEPKVGKEAIDFKDVKRVDHIL 219
           VFAARIGR LY++ KAFTTAA K EKIG+V+ ENE T  EPKV KE ID K++KRVDHIL
Sbjct: 130 VFAARIGRALYYIEKAFTTAASKLEKIGYVDSENETTIPEPKVAKETIDLKEIKRVDHIL 189

Query: 218 ASLQRKLXXXXXXXXXXXXXXXXPSEADNIDPDNQQVTAPQLXXXXXXXDQGPAKRMKF 42
           ASLQRKL                 +      P+ Q+             DQGPAKRMKF
Sbjct: 190 ASLQRKLPPAPPPPPFPEGYVPPSTAETEKGPETQEAAESLAPTVDPILDQGPAKRMKF 248