BLASTX nr result

ID: Akebia27_contig00014865 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Akebia27_contig00014865
         (1361 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002531488.1| serine/arginine rich splicing factor, putati...    73   3e-10
ref|XP_002285794.1| PREDICTED: uncharacterized protein LOC100243...    70   2e-09
ref|XP_007042969.1| Serine/arginine rich splicing factor, putati...    69   4e-09
ref|XP_007042967.1| Serine/arginine rich splicing factor, putati...    69   4e-09

>ref|XP_002531488.1| serine/arginine rich splicing factor, putative [Ricinus communis]
           gi|223528897|gb|EEF30895.1| serine/arginine rich
           splicing factor, putative [Ricinus communis]
          Length = 257

 Score = 72.8 bits (177), Expect = 3e-10
 Identities = 50/128 (39%), Positives = 55/128 (42%), Gaps = 2/128 (1%)
 Frame = +3

Query: 3   RDRNYRSRSRSKXXXXXXXXXXXXXXXXXX--SRSPSVSPDYRKGRGHRRYDDERQKXXX 176
           +DR+YR RSRSK                    SRS S SPDY +GRG  RYDDER+    
Sbjct: 131 KDRDYRKRSRSKSLDRHERDKYRGRERDYRRQSRSRSASPDYSRGRGRGRYDDERRSSSR 190

Query: 177 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDKRSRDKSSPTPRSVSPPIGTAVSRSPS 356
                                           D+RSRD  SPTPRS SP      SRSPS
Sbjct: 191 SMGSASPARRSPSPRRSRSPLKNSPPKGASP-DRRSRDGRSPTPRSASPHGRAPASRSPS 249

Query: 357 PHNSDSDE 380
           P NSD DE
Sbjct: 250 PRNSDVDE 257


>ref|XP_002285794.1| PREDICTED: uncharacterized protein LOC100243776 [Vitis vinifera]
           gi|302141951|emb|CBI19154.3| unnamed protein product
           [Vitis vinifera]
          Length = 257

 Score = 70.1 bits (170), Expect = 2e-09
 Identities = 49/128 (38%), Positives = 57/128 (44%), Gaps = 2/128 (1%)
 Frame = +3

Query: 3   RDRNYR--SRSRSKXXXXXXXXXXXXXXXXXXSRSPSVSPDYRKGRGHRRYDDERQKXXX 176
           RDR+YR  SRSRS+                  SRS S SPD+ K RG  RYDDER+    
Sbjct: 131 RDRDYRKRSRSRSRGRNDRDRYRGKERDSRRRSRSRSASPDHHKDRGRGRYDDERRSRSR 190

Query: 177 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDKRSRDKSSPTPRSVSPPIGTAVSRSPS 356
                                             R R++ SPTP+SVSP    A SRSPS
Sbjct: 191 SYGSASPARRSPSPRGSPSPRRTPPSREESPVG-RKRNERSPTPKSVSPRGRPADSRSPS 249

Query: 357 PHNSDSDE 380
           PHNSD+DE
Sbjct: 250 PHNSDADE 257


>ref|XP_007042969.1| Serine/arginine rich splicing factor, putative isoform 3 [Theobroma
           cacao] gi|590688515|ref|XP_007042971.1| Serine/arginine
           rich splicing factor, putative isoform 3 [Theobroma
           cacao] gi|508706904|gb|EOX98800.1| Serine/arginine rich
           splicing factor, putative isoform 3 [Theobroma cacao]
           gi|508706906|gb|EOX98802.1| Serine/arginine rich
           splicing factor, putative isoform 3 [Theobroma cacao]
          Length = 257

 Score = 69.3 bits (168), Expect = 4e-09
 Identities = 49/128 (38%), Positives = 56/128 (43%), Gaps = 2/128 (1%)
 Frame = +3

Query: 3   RDRNYR--SRSRSKXXXXXXXXXXXXXXXXXXSRSPSVSPDYRKGRGHRRYDDERQKXXX 176
           +DR+YR  SRSRS                   SRS S SPDY KGRG  RYDD+R+    
Sbjct: 132 KDRDYRRRSRSRSYDRHERDRYRGKDKDYRRRSRSRSASPDYSKGRGRGRYDDDRRSSSR 191

Query: 177 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDKRSRDKSSPTPRSVSPPIGTAVSRSPS 356
                                           D+ SRD  +P+PRSVSP    A SRSPS
Sbjct: 192 SMSASPARRSVSPRKSPSPRKASPPRGGSP--DRHSRDGRTPSPRSVSPRGRPAESRSPS 249

Query: 357 PHNSDSDE 380
           P NSD DE
Sbjct: 250 PRNSDVDE 257


>ref|XP_007042967.1| Serine/arginine rich splicing factor, putative isoform 1 [Theobroma
           cacao] gi|590688506|ref|XP_007042968.1| Serine/arginine
           rich splicing factor, putative isoform 1 [Theobroma
           cacao] gi|590688512|ref|XP_007042970.1| Serine/arginine
           rich splicing factor, putative isoform 1 [Theobroma
           cacao] gi|508706902|gb|EOX98798.1| Serine/arginine rich
           splicing factor, putative isoform 1 [Theobroma cacao]
           gi|508706903|gb|EOX98799.1| Serine/arginine rich
           splicing factor, putative isoform 1 [Theobroma cacao]
           gi|508706905|gb|EOX98801.1| Serine/arginine rich
           splicing factor, putative isoform 1 [Theobroma cacao]
          Length = 268

 Score = 69.3 bits (168), Expect = 4e-09
 Identities = 49/128 (38%), Positives = 56/128 (43%), Gaps = 2/128 (1%)
 Frame = +3

Query: 3   RDRNYR--SRSRSKXXXXXXXXXXXXXXXXXXSRSPSVSPDYRKGRGHRRYDDERQKXXX 176
           +DR+YR  SRSRS                   SRS S SPDY KGRG  RYDD+R+    
Sbjct: 143 KDRDYRRRSRSRSYDRHERDRYRGKDKDYRRRSRSRSASPDYSKGRGRGRYDDDRRSSSR 202

Query: 177 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDKRSRDKSSPTPRSVSPPIGTAVSRSPS 356
                                           D+ SRD  +P+PRSVSP    A SRSPS
Sbjct: 203 SMSASPARRSVSPRKSPSPRKASPPRGGSP--DRHSRDGRTPSPRSVSPRGRPAESRSPS 260

Query: 357 PHNSDSDE 380
           P NSD DE
Sbjct: 261 PRNSDVDE 268


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