BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Akebia27_contig00014574
         (657 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN78447.1| hypothetical protein VITISV_026810 [Vitis vinifera]   149   6e-34
emb|CAN68274.1| hypothetical protein VITISV_032833 [Vitis vinifera]   135   1e-29
gb|AAK43485.1|AC084807_10 polyprotein, putative [Arabidopsis tha...   134   3e-29
emb|CAN68489.1| hypothetical protein VITISV_037543 [Vitis vinifera]   129   1e-28
gb|AAF99727.1|AC004557_6 F17L21.7 [Arabidopsis thaliana]              131   2e-28
emb|CAN82221.1| hypothetical protein VITISV_015226 [Vitis vinifera]   128   3e-28
emb|CAB46043.1| retrotransposon like protein [Arabidopsis thalia...   129   6e-28
gb|AAC02666.1| polyprotein [Arabidopsis thaliana]                     127   4e-27
gb|AAC02664.1| polyprotein [Arabidopsis thaliana]                     127   4e-27
gb|AAC02669.1| polyprotein [Arabidopsis thaliana]                     127   4e-27
gb|AAT85031.1| putative polyprotein [Oryza sativa Japonica Group...   126   5e-27
gb|AAU10682.1| putative polyprotein [Oryza sativa Japonica Group]     126   7e-27
gb|AAC02672.1| polyprotein [Arabidopsis arenosa]                      126   7e-27
emb|CAN62533.1| hypothetical protein VITISV_030700 [Vitis vinifera]   125   9e-27
emb|CAN70473.1| hypothetical protein VITISV_037490 [Vitis vinifera]   124   3e-26
gb|AAU43956.1| unknown protein [Oryza sativa Japonica Group] gi|...   124   3e-26
gb|ABG00000.1| retrotransposon protein, putative, Ty1-copia subc...   120   6e-26
dbj|BAA78426.1| polyprotein [Arabidopsis thaliana]                    122   1e-25
dbj|BAA78427.1| polyprotein [Arabidopsis thaliana]                    122   1e-25
dbj|BAA78424.1| polyprotein [Arabidopsis thaliana] gi|404433798|...   122   1e-25

>emb|CAN78447.1| hypothetical protein VITISV_026810 [Vitis vinifera]
          Length = 1171

 Score =  149 bits (377), Expect = 6e-34
 Identities = 74/149 (49%), Positives = 94/149 (63%), Gaps = 1/149 (0%)
 Frame = +3

Query: 126 LGITTPLQTWHSRLGHPSESILQQLTTGSLISVSGIHKFKHVCEFC*MAKSHKLPFSIST 305
           +G+     TWHSRLGHPS  I   L   + +SV G       C  C + K+ +LPF  S+
Sbjct: 451 IGVRANADTWHSRLGHPSSVIFNSLFHSNKLSVKGSSTKLEFCSACQLGKAKQLPFPESS 510

Query: 306 HHSSYPVELVHSDVWTSVVMSISGCKYYGLFIDDYSRFSWLFSLKQKSDVSLSFIKFKCL 485
             SS P+ L+HSDVW S V S  GC YY LFIDDYSR+SWL+ L +KSDV  +F+KFK +
Sbjct: 511 RQSSVPLALIHSDVWVSPVQSTGGCSYYVLFIDDYSRYSWLYPLHRKSDVFATFVKFKTI 570

Query: 486 VENLFSFKIKQLQTDHRREYLS-PFQSFL 569
            E LFS  IKQ+QTD+  E+ S  F+ FL
Sbjct: 571 AEKLFSTSIKQIQTDNGGEFTSNQFKQFL 599


>emb|CAN68274.1| hypothetical protein VITISV_032833 [Vitis vinifera]
          Length = 715

 Score =  135 bits (339), Expect = 1e-29
 Identities = 66/150 (44%), Positives = 95/150 (63%), Gaps = 1/150 (0%)
 Frame = +3

Query: 126 LGITTPLQTWHSRLGHPSESILQQLTTGSLISVSGIHKFKHVCEFC*MAKSHKLPFSIST 305
           +G+     TWH RLGHPS S L  +     + VS     K +   C + K  +LPFS S+
Sbjct: 3   VGVKAFTATWHCRLGHPSSSTLHNVLHNYSLPVSDSFNKKSISVSCQLGKFKQLPFSTSS 62

Query: 306 HHSSYPVELVHSDVWTSVVMSISGCKYYGLFIDDYSRFSWLFSLKQKSDVSLSFIKFKCL 485
             S+ P+EL+HSDVW++   S+SGC YY +FID+++RF WL+ +  KSDV  +F+KFK L
Sbjct: 63  RESTAPLELIHSDVWSTSTPSLSGCLYYVIFIDEFTRFCWLYPISNKSDVYATFVKFKIL 122

Query: 486 VENLFSFKIKQLQTDHRREYLSP-FQSFLA 572
           VE  F++ I +LQ+D+  EY S  F+ FL+
Sbjct: 123 VEKQFNYPIXKLQSDNGGEYCSTIFKQFLS 152


>gb|AAK43485.1|AC084807_10 polyprotein, putative [Arabidopsis thaliana]
           gi|225898008|dbj|BAH30336.1| hypothetical protein
           [Arabidopsis thaliana]
          Length = 1459

 Score =  134 bits (337), Expect = 3e-29
 Identities = 66/138 (47%), Positives = 91/138 (65%)
 Frame = +3

Query: 138 TPLQTWHSRLGHPSESILQQLTTGSLISVSGIHKFKHVCEFC*MAKSHKLPFSISTHHSS 317
           T L +WHSRLGHPS SIL  L +   + VS     K  C  C + KSHKLPF+ S+ HSS
Sbjct: 468 TTLSSWHSRLGHPSASILNTLLSKFSLPVSVASSNKTSCSDCLINKSHKLPFATSSIHSS 527

Query: 318 YPVELVHSDVWTSVVMSISGCKYYGLFIDDYSRFSWLFSLKQKSDVSLSFIKFKCLVENL 497
            P+E + +DVWTS ++S    KYY + +D Y+R++WL+ L+QKS V  +FI FK LVEN 
Sbjct: 528 SPLEYIFTDVWTSPIISHDNYKYYLVLVDHYTRYTWLYPLQQKSQVKATFIAFKALVENR 587

Query: 498 FSFKIKQLQTDHRREYLS 551
           F  KI+ L +D+  E+++
Sbjct: 588 FQAKIRTLYSDNGGEFIA 605


>emb|CAN68489.1| hypothetical protein VITISV_037543 [Vitis vinifera]
          Length = 1449

 Score =  129 bits (325), Expect(2) = 1e-28
 Identities = 68/151 (45%), Positives = 99/151 (65%), Gaps = 1/151 (0%)
 Frame = +3

Query: 126 LGITTPLQTWHSRLGHPSESILQQLTTGSLISVSGIHKFKHVCEFC*MAKSHKLPFSIST 305
           L +TT    WHSRLGHP+++IL+ + T   IS    HK  +VC  C  AKSHKLPF++  
Sbjct: 513 LSLTTTTTLWHSRLGHPADNILKHILTSCNISHQ-CHK-NNVCCACQFAKSHKLPFNVXV 570

Query: 306 HHSSYPVELVHSDVWTSV-VMSISGCKYYGLFIDDYSRFSWLFSLKQKSDVSLSFIKFKC 482
             +S+P+ L+H+D+W    + S +G +Y+ LF+DD+SRFSW++ L  K      FIKFK 
Sbjct: 571 SRASHPLALLHADLWGPXSIPSTTGARYFILFVDDFSRFSWIYPLHSKDQALSVFIKFKS 630

Query: 483 LVENLFSFKIKQLQTDHRREYLSPFQSFLAT 575
           LVEN F+ +I+ L++D+  E+   F S+LAT
Sbjct: 631 LVENQFNSRIQCLRSDNGGEF-KAFSSYLAT 660



 Score = 23.5 bits (49), Expect(2) = 1e-28
 Identities = 10/18 (55%), Positives = 12/18 (66%)
 Frame = +1

Query: 1   DMQTNKVLLQGPSKAGLY 54
           D  T K+LLQG  + GLY
Sbjct: 472 DQVTKKILLQGSLEHGLY 489


>gb|AAF99727.1|AC004557_6 F17L21.7 [Arabidopsis thaliana]
          Length = 1534

 Score =  131 bits (329), Expect = 2e-28
 Identities = 67/146 (45%), Positives = 93/146 (63%)
 Frame = +3

Query: 138 TPLQTWHSRLGHPSESILQQLTTGSLISVSGIHKFKHVCEFC*MAKSHKLPFSISTHHSS 317
           T L +WHSRLGHPS  +L+ L +   + VS   +    C  C + KSHKLPF  +T  S 
Sbjct: 555 TTLPSWHSRLGHPSPPVLKSLVSQFSLPVSNSSQKHFPCSHCLINKSHKLPFYSNTIISY 614

Query: 318 YPVELVHSDVWTSVVMSISGCKYYGLFIDDYSRFSWLFSLKQKSDVSLSFIKFKCLVENL 497
            P+E V+SDVWTS V S+   KYY + +D Y+R++WL+ LKQKS V  +F+ FK LVEN 
Sbjct: 615 TPLEYVYSDVWTSPVTSVDNFKYYLILVDHYTRYTWLYPLKQKSQVRETFVAFKALVENR 674

Query: 498 FSFKIKQLQTDHRREYLSPFQSFLAT 575
           F  KI+ L +D+  E+++  + FL T
Sbjct: 675 FQTKIRTLYSDNGGEFIA-LRQFLLT 699


>emb|CAN82221.1| hypothetical protein VITISV_015226 [Vitis vinifera]
          Length = 1007

 Score =  128 bits (322), Expect(2) = 3e-28
 Identities = 67/151 (44%), Positives = 99/151 (65%), Gaps = 1/151 (0%)
 Frame = +3

Query: 126 LGITTPLQTWHSRLGHPSESILQQLTTGSLISVSGIHKFKHVCEFC*MAKSHKLPFSIST 305
           + +TT    WHSRLGHP+++IL+ + T   IS    HK  +VC  C  AKSHKLPF++S 
Sbjct: 165 ISLTTITTLWHSRLGHPADNILKHILTSCNISHQ-CHK-NNVCCACQFAKSHKLPFNVSV 222

Query: 306 HHSSYPVELVHSDVW-TSVVMSISGCKYYGLFIDDYSRFSWLFSLKQKSDVSLSFIKFKC 482
             +S+P  L+H+D+W  + + S +G +Y+ LF+DD+S FSW++ L  K      FIKFK 
Sbjct: 223 SRASHPFALLHADLWGPTSIPSTTGARYFILFVDDFSHFSWIYPLHSKDQALSXFIKFKS 282

Query: 483 LVENLFSFKIKQLQTDHRREYLSPFQSFLAT 575
           LVEN F+ +I+ L++D+  E+   F S+LAT
Sbjct: 283 LVENQFNSRIQCLRSDNGGEF-KAFSSYLAT 312



 Score = 23.5 bits (49), Expect(2) = 3e-28
 Identities = 10/18 (55%), Positives = 12/18 (66%)
 Frame = +1

Query: 1   DMQTNKVLLQGPSKAGLY 54
           D  T K+LLQG  + GLY
Sbjct: 124 DQVTKKILLQGSLEHGLY 141


>emb|CAB46043.1| retrotransposon like protein [Arabidopsis thaliana]
           gi|7268438|emb|CAB80958.1| retrotransposon like protein
           [Arabidopsis thaliana]
          Length = 1474

 Score =  129 bits (325), Expect = 6e-28
 Identities = 65/138 (47%), Positives = 90/138 (65%)
 Frame = +3

Query: 138 TPLQTWHSRLGHPSESILQQLTTGSLISVSGIHKFKHVCEFC*MAKSHKLPFSISTHHSS 317
           T L +WHSRLGHPS SIL  L +   + VS     K  C  C + KSHKLPFSIS+  S+
Sbjct: 463 TTLSSWHSRLGHPSSSILNTLISKFSLPVSVSASNKLACSDCFINKSHKLPFSISSIKST 522

Query: 318 YPVELVHSDVWTSVVMSISGCKYYGLFIDDYSRFSWLFSLKQKSDVSLSFIKFKCLVENL 497
            P+E + SDVW S ++S    KYY + +D ++R++WL+ L+QKS V  +FI FK LVEN 
Sbjct: 523 SPLEYIFSDVWMSPILSPDNYKYYLVLVDHHTRYTWLYPLQQKSQVKSTFIAFKALVENR 582

Query: 498 FSFKIKQLQTDHRREYLS 551
           F  KI+ L +D+  E+++
Sbjct: 583 FQAKIRTLYSDNGGEFIA 600


>gb|AAC02666.1| polyprotein [Arabidopsis thaliana]
          Length = 1451

 Score =  127 bits (318), Expect = 4e-27
 Identities = 65/146 (44%), Positives = 97/146 (66%)
 Frame = +3

Query: 138 TPLQTWHSRLGHPSESILQQLTTGSLISVSGIHKFKHVCEFC*MAKSHKLPFSISTHHSS 317
           T L +WH+RLGHPS  IL+ L +   + +S   + + +C  C + KSHKLPF  +T  SS
Sbjct: 464 TDLPSWHARLGHPSLPILKALISKFSLPISHSLQNQLLCSDCSINKSHKLPFYSNTIASS 523

Query: 318 YPVELVHSDVWTSVVMSISGCKYYGLFIDDYSRFSWLFSLKQKSDVSLSFIKFKCLVENL 497
           +P+E +++DVWTS + SI   KYY + +D Y+R++WL+ L++KS V   FI F  LVEN 
Sbjct: 524 HPLEYLYTDVWTSPITSIDNYKYYLVIVDHYTRYTWLYPLRKKSQVREMFITFTALVENK 583

Query: 498 FSFKIKQLQTDHRREYLSPFQSFLAT 575
           F FKI  L +D+  E+++  +SFLA+
Sbjct: 584 FKFKIGTLYSDNGGEFIA-MRSFLAS 608


>gb|AAC02664.1| polyprotein [Arabidopsis thaliana]
          Length = 1451

 Score =  127 bits (318), Expect = 4e-27
 Identities = 65/146 (44%), Positives = 97/146 (66%)
 Frame = +3

Query: 138 TPLQTWHSRLGHPSESILQQLTTGSLISVSGIHKFKHVCEFC*MAKSHKLPFSISTHHSS 317
           T L +WH+RLGHPS  IL+ L +   + +S   + + +C  C + KSHKLPF  +T  SS
Sbjct: 464 TDLPSWHARLGHPSLPILKALISKFSLPISHSLQNQLLCSDCSINKSHKLPFYSNTIASS 523

Query: 318 YPVELVHSDVWTSVVMSISGCKYYGLFIDDYSRFSWLFSLKQKSDVSLSFIKFKCLVENL 497
           +P+E +++DVWTS + SI   KYY + +D Y+R++WL+ L++KS V   FI F  LVEN 
Sbjct: 524 HPLEYLYTDVWTSPITSIDNYKYYLVIVDHYTRYTWLYPLRKKSQVREMFITFTALVENK 583

Query: 498 FSFKIKQLQTDHRREYLSPFQSFLAT 575
           F FKI  L +D+  E+++  +SFLA+
Sbjct: 584 FKFKIGTLYSDNGGEFIA-MRSFLAS 608


>gb|AAC02669.1| polyprotein [Arabidopsis thaliana]
          Length = 1451

 Score =  127 bits (318), Expect = 4e-27
 Identities = 65/146 (44%), Positives = 97/146 (66%)
 Frame = +3

Query: 138 TPLQTWHSRLGHPSESILQQLTTGSLISVSGIHKFKHVCEFC*MAKSHKLPFSISTHHSS 317
           T L +WH+RLGHPS  IL+ L +   + +S   + + +C  C + KSHKLPF  +T  SS
Sbjct: 464 TDLPSWHARLGHPSLPILKALISKFSLPISHSLQNQLLCSDCSINKSHKLPFYSNTIASS 523

Query: 318 YPVELVHSDVWTSVVMSISGCKYYGLFIDDYSRFSWLFSLKQKSDVSLSFIKFKCLVENL 497
           +P+E +++DVWTS + SI   KYY + +D Y+R++WL+ L++KS V   FI F  LVEN 
Sbjct: 524 HPLEYLYTDVWTSPITSIDNYKYYLVIVDHYTRYTWLYPLRKKSQVREMFITFTALVENK 583

Query: 498 FSFKIKQLQTDHRREYLSPFQSFLAT 575
           F FKI  L +D+  E+++  +SFLA+
Sbjct: 584 FKFKIGTLYSDNGGEFIA-MRSFLAS 608


>gb|AAT85031.1| putative polyprotein [Oryza sativa Japonica Group]
           gi|108708884|gb|ABF96679.1| retrotransposon protein,
           putative, Ty1-copia subclass [Oryza sativa Japonica
           Group]
          Length = 1437

 Score =  126 bits (317), Expect = 5e-27
 Identities = 64/140 (45%), Positives = 88/140 (62%), Gaps = 1/140 (0%)
 Frame = +3

Query: 129 GITTP-LQTWHSRLGHPSESILQQLTTGSLISVSGIHKFKHVCEFC*MAKSHKLPFSIST 305
           G+T P  + WHSRLGHPS ++++++     +    + +   VC+ C  AKSH+L F  ST
Sbjct: 447 GVTKPSFERWHSRLGHPSYTVVEKVIKSQNLPCLDVSEQVSVCDACQKAKSHQLSFPKST 506

Query: 306 HHSSYPVELVHSDVWTSVVMSISGCKYYGLFIDDYSRFSWLFSLKQKSDVSLSFIKFKCL 485
             S YP+ELV SDVW     S+   KYY  FIDDYS+F+W++ LK KS+V   F +F+ L
Sbjct: 507 SESKYPLELVFSDVWGPAPQSVGNNKYYVSFIDDYSKFTWIYLLKYKSEVFDKFHEFQSL 566

Query: 486 VENLFSFKIKQLQTDHRREY 545
           VE LF+ KI  +QTD   EY
Sbjct: 567 VERLFNRKIVAMQTDWGGEY 586


>gb|AAU10682.1| putative polyprotein [Oryza sativa Japonica Group]
          Length = 1210

 Score =  126 bits (316), Expect = 7e-27
 Identities = 69/148 (46%), Positives = 92/148 (62%), Gaps = 1/148 (0%)
 Frame = +3

Query: 105 TFSFTAFLGITTP-LQTWHSRLGHPSESILQQLTTGSLISVSGIHKFKHVCEFC*MAKSH 281
           T S    LG   P +  WHSRLGHPS  I+Q++ + + +   G  K   VC+ C   KSH
Sbjct: 432 TSSSKQVLGAIKPTVSIWHSRLGHPSWQIVQKVVSHNNLPCLGESKELGVCDACQKGKSH 491

Query: 282 KLPFSISTHHSSYPVELVHSDVWTSVVMSISGCKYYGLFIDDYSRFSWLFSLKQKSDVSL 461
           +LPF  ST  S++P+ELV SDVW     S+ G KYY  FIDD+S+F+W++ LKQKS+V  
Sbjct: 492 QLPFLKSTSASNFPLELVFSDVWGPAPDSVGGRKYYVSFIDDFSKFTWIYLLKQKSEVFH 551

Query: 462 SFIKFKCLVENLFSFKIKQLQTDHRREY 545
            F +F+ LVE +F  KI  +QTD   EY
Sbjct: 552 KFHEFQQLVERIFYRKIIAMQTDWGGEY 579


>gb|AAC02672.1| polyprotein [Arabidopsis arenosa]
          Length = 1390

 Score =  126 bits (316), Expect = 7e-27
 Identities = 65/146 (44%), Positives = 97/146 (66%)
 Frame = +3

Query: 138 TPLQTWHSRLGHPSESILQQLTTGSLISVSGIHKFKHVCEFC*MAKSHKLPFSISTHHSS 317
           T L +WH+RLGHPS  IL+ L +   + +S   + + +C  C + KSHKLPF  +T  SS
Sbjct: 464 TDLPSWHARLGHPSLPILKTLISKFSLPISHSLQNQLLCSDCSINKSHKLPFYSNTIASS 523

Query: 318 YPVELVHSDVWTSVVMSISGCKYYGLFIDDYSRFSWLFSLKQKSDVSLSFIKFKCLVENL 497
           +P+E +++DVWTS + SI   KYY + +D Y+R++WL+ L+QKS V  +FI F  LVEN 
Sbjct: 524 HPLEYLYTDVWTSPITSIDNYKYYLVIVDHYTRYTWLYPLRQKSQVRETFITFTALVENK 583

Query: 498 FSFKIKQLQTDHRREYLSPFQSFLAT 575
           F  KI  L +D+  E+++  +SFLA+
Sbjct: 584 FKSKIGTLYSDNGGEFIA-LRSFLAS 608


>emb|CAN62533.1| hypothetical protein VITISV_030700 [Vitis vinifera]
          Length = 731

 Score =  125 bits (315), Expect = 9e-27
 Identities = 63/151 (41%), Positives = 95/151 (62%)
 Frame = +3

Query: 120 AFLGITTPLQTWHSRLGHPSESILQQLTTGSLISVSGIHKFKHVCEFC*MAKSHKLPFSI 299
           AF  + T    WH RLGHP+  IL+ + + + +++S        C  C   KSHKL FS 
Sbjct: 278 AFSSVKTSSSEWHHRLGHPAFPILKHVISTNNLALSSSSLLHFSCNACHCNKSHKLSFSN 337

Query: 300 STHHSSYPVELVHSDVWTSVVMSISGCKYYGLFIDDYSRFSWLFSLKQKSDVSLSFIKFK 479
           ST +SS+P+++++SDVWTS ++S  G KYY +F+D ++++ W + LKQKS V   FI+FK
Sbjct: 338 STINSSHPLQILYSDVWTSPIISYDGFKYYVIFVDHFTKYIWFYPLKQKSQVKDIFIRFK 397

Query: 480 CLVENLFSFKIKQLQTDHRREYLSPFQSFLA 572
            +VE  F+  I  L +D+  EY+S   +FLA
Sbjct: 398 AIVEKHFNQNIHTLYSDNGGEYIS-LSNFLA 427


>emb|CAN70473.1| hypothetical protein VITISV_037490 [Vitis vinifera]
          Length = 786

 Score =  124 bits (311), Expect = 3e-26
 Identities = 65/152 (42%), Positives = 95/152 (62%)
 Frame = +3

Query: 120 AFLGITTPLQTWHSRLGHPSESILQQLTTGSLISVSGIHKFKHVCEFC*MAKSHKLPFSI 299
           AF  + T    WH RLGHP   IL+ + +   + +S       +C  C   K+HKLPFS 
Sbjct: 151 AFSSVKTSSFEWHHRLGHPVFPILKHIVSHYQLDLSSSLISDFLCNVCHYNKNHKLPFST 210

Query: 300 STHHSSYPVELVHSDVWTSVVMSISGCKYYGLFIDDYSRFSWLFSLKQKSDVSLSFIKFK 479
           ST  SS P+E++ SDVWTS+V+S +G K Y +F+D ++++ W +S +QKS+V   FI+FK
Sbjct: 211 STVVSSQPLEIIFSDVWTSLVISHNGFKNYVIFVDHFTKYIWFYSFQQKSEVKDVFIRFK 270

Query: 480 CLVENLFSFKIKQLQTDHRREYLSPFQSFLAT 575
            +VE  F  KI  L +D+  EYL+  ++FLAT
Sbjct: 271 AIVETHFQNKIHTLYSDNGGEYLA-LRTFLAT 301


>gb|AAU43956.1| unknown protein [Oryza sativa Japonica Group]
           gi|52353503|gb|AAU44069.1| putative polyprotein [Oryza
           sativa Japonica Group]
          Length = 1447

 Score =  124 bits (310), Expect = 3e-26
 Identities = 60/142 (42%), Positives = 91/142 (64%)
 Frame = +3

Query: 120 AFLGITTPLQTWHSRLGHPSESILQQLTTGSLISVSGIHKFKHVCEFC*MAKSHKLPFSI 299
           AF  I    + WHSRLGHP+  I++++ + + +        + VC+ C   KSH+LP+S 
Sbjct: 447 AFGAIKPSFERWHSRLGHPASPIVEKVISKNNLPCLAESNKQSVCDACQQGKSHQLPYSR 506

Query: 300 STHHSSYPVELVHSDVWTSVVMSISGCKYYGLFIDDYSRFSWLFSLKQKSDVSLSFIKFK 479
           S+  SS+P+EL++SDVW   + S+ G +YY  FI DYS+F+WL+ +K KS+V   F +F+
Sbjct: 507 SSSMSSHPLELIYSDVWGPALTSVGGKQYYVSFIGDYSKFTWLYLIKHKSEVIQKFHEFQ 566

Query: 480 CLVENLFSFKIKQLQTDHRREY 545
            LVE LF+ KI  +Q+D   EY
Sbjct: 567 ALVERLFNRKIIAMQSDWGGEY 588


>gb|ABG00000.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
            Japonica Group]
          Length = 2074

 Score =  120 bits (302), Expect(2) = 6e-26
 Identities = 64/141 (45%), Positives = 88/141 (62%), Gaps = 1/141 (0%)
 Frame = +3

Query: 126  LGITTP-LQTWHSRLGHPSESILQQLTTGSLISVSGIHKFKHVCEFC*MAKSHKLPFSIS 302
            LG   P +  WHSRLGHPS +I+Q++ + + +   G      VC  C  AKSH+LP+  S
Sbjct: 1406 LGAIKPTMSRWHSRLGHPSLAIVQKVVSSNNLPCLGDVNESGVCNACQQAKSHQLPYPKS 1465

Query: 303  THHSSYPVELVHSDVWTSVVMSISGCKYYGLFIDDYSRFSWLFSLKQKSDVSLSFIKFKC 482
               S+ P+ELV SDVW     S+ G KYY  FIDD+S+F+W++ LK K++V L F +F+ 
Sbjct: 1466 FSVSNNPLELVFSDVWGPAPTSVGGRKYYVSFIDDFSKFTWIYLLKSKAEVFLKFQEFQQ 1525

Query: 483  LVENLFSFKIKQLQTDHRREY 545
             VE LF+ KI  +QTD   EY
Sbjct: 1526 RVERLFNRKIISMQTDWGGEY 1546



 Score = 23.1 bits (48), Expect(2) = 6e-26
 Identities = 9/18 (50%), Positives = 12/18 (66%)
 Frame = +1

Query: 1    DMQTNKVLLQGPSKAGLY 54
            D  T  +LL+GP + GLY
Sbjct: 1375 DQVTKNLLLRGPCRNGLY 1392


>dbj|BAA78426.1| polyprotein [Arabidopsis thaliana]
          Length = 1475

 Score =  122 bits (305), Expect = 1e-25
 Identities = 63/134 (47%), Positives = 91/134 (67%), Gaps = 1/134 (0%)
 Frame = +3

Query: 150 TWHSRLGHPSESILQQLTTG-SLISVSGIHKFKHVCEFC*MAKSHKLPFSISTHHSSYPV 326
           +WHSRLGHPS +IL  + +  SL  ++  HK    C  C + KSHK+PFS ST  SS P+
Sbjct: 464 SWHSRLGHPSLAILNSVISNHSLPVLNPSHKLLS-CSDCFINKSHKVPFSNSTITSSKPL 522

Query: 327 ELVHSDVWTSVVMSISGCKYYGLFIDDYSRFSWLFSLKQKSDVSLSFIKFKCLVENLFSF 506
           E ++SDVW+S ++SI   +YY +F+D ++R++WL+ LKQKS V  +FI FK LVEN F  
Sbjct: 523 EYIYSDVWSSPILSIDNYRYYVIFVDHFTRYTWLYPLKQKSQVKDTFIIFKSLVENRFQT 582

Query: 507 KIKQLQTDHRREYL 548
           +I  L +D+  E++
Sbjct: 583 RIGTLYSDNGGEFV 596


>dbj|BAA78427.1| polyprotein [Arabidopsis thaliana]
          Length = 1421

 Score =  122 bits (305), Expect = 1e-25
 Identities = 63/134 (47%), Positives = 91/134 (67%), Gaps = 1/134 (0%)
 Frame = +3

Query: 150 TWHSRLGHPSESILQQLTTG-SLISVSGIHKFKHVCEFC*MAKSHKLPFSISTHHSSYPV 326
           +WHSRLGHPS +IL  + +  SL  ++  HK    C  C + KSHK+PFS ST  SS P+
Sbjct: 464 SWHSRLGHPSLAILNSVISNHSLPVLNPSHKLLS-CSDCFINKSHKVPFSNSTITSSKPL 522

Query: 327 ELVHSDVWTSVVMSISGCKYYGLFIDDYSRFSWLFSLKQKSDVSLSFIKFKCLVENLFSF 506
           E ++SDVW+S ++SI   +YY +F+D ++R++WL+ LKQKS V  +FI FK LVEN F  
Sbjct: 523 EYIYSDVWSSPILSIDNYRYYVIFVDHFTRYTWLYPLKQKSQVKDTFIIFKSLVENRFQT 582

Query: 507 KIKQLQTDHRREYL 548
           +I  L +D+  E++
Sbjct: 583 RIGTLYSDNGGEFV 596


>dbj|BAA78424.1| polyprotein [Arabidopsis thaliana] gi|404433798|dbj|BAM44533.1|
           polyprotein [Arabidopsis thaliana]
          Length = 1330

 Score =  122 bits (305), Expect = 1e-25
 Identities = 63/134 (47%), Positives = 91/134 (67%), Gaps = 1/134 (0%)
 Frame = +3

Query: 150 TWHSRLGHPSESILQQLTTG-SLISVSGIHKFKHVCEFC*MAKSHKLPFSISTHHSSYPV 326
           +WHSRLGHPS +IL  + +  SL  ++  HK    C  C + KSHK+PFS ST  SS P+
Sbjct: 319 SWHSRLGHPSLAILNSVISNHSLPVLNPSHKLLS-CSDCFINKSHKVPFSNSTITSSKPL 377

Query: 327 ELVHSDVWTSVVMSISGCKYYGLFIDDYSRFSWLFSLKQKSDVSLSFIKFKCLVENLFSF 506
           E ++SDVW+S ++SI   +YY +F+D ++R++WL+ LKQKS V  +FI FK LVEN F  
Sbjct: 378 EYIYSDVWSSPILSIDNYRYYVIFVDHFTRYTWLYPLKQKSQVKDTFIIFKSLVENRFQT 437

Query: 507 KIKQLQTDHRREYL 548
           +I  L +D+  E++
Sbjct: 438 RIGTLYSDNGGEFV 451