BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Akebia27_contig00013960
         (1934 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002284797.2| PREDICTED: tRNA pseudouridine synthase A, mi...   660   0.0  
ref|XP_004145528.1| PREDICTED: tRNA pseudouridine synthase A, mi...   644   0.0  
ref|XP_004157082.1| PREDICTED: LOW QUALITY PROTEIN: tRNA pseudou...   642   0.0  
gb|ADN34131.1| tRNA pseudouridine synthase family protein [Cucum...   641   0.0  
ref|XP_003519139.1| PREDICTED: tRNA pseudouridine synthase A, mi...   639   e-180
ref|XP_002307759.2| hypothetical protein POPTR_0005s26830g [Popu...   634   e-179
ref|XP_007154900.1| hypothetical protein PHAVU_003G157400g [Phas...   632   e-178
ref|XP_006575306.1| PREDICTED: tRNA pseudouridine synthase A, mi...   629   e-177
ref|XP_004507719.1| PREDICTED: tRNA pseudouridine synthase A, mi...   626   e-176
ref|XP_006435279.1| hypothetical protein CICLE_v10000838mg [Citr...   625   e-176
ref|XP_007010013.1| Pseudouridine synthase [Theobroma cacao] gi|...   625   e-176
ref|XP_004292926.1| PREDICTED: tRNA pseudouridine synthase A, mi...   624   e-176
ref|XP_004507720.1| PREDICTED: tRNA pseudouridine synthase A, mi...   623   e-176
ref|XP_002510619.1| pseudouridylate synthase, putative [Ricinus ...   623   e-176
ref|XP_007154901.1| hypothetical protein PHAVU_003G157400g [Phas...   622   e-175
ref|XP_003610360.1| tRNA pseudouridine synthase [Medicago trunca...   622   e-175
ref|XP_003610356.1| tRNA pseudouridine synthase [Medicago trunca...   622   e-175
gb|ACJ85562.1| unknown [Medicago truncatula] gi|388491044|gb|AFK...   619   e-174
ref|XP_006473737.1| PREDICTED: tRNA pseudouridine synthase A, mi...   618   e-174
emb|CBI18897.3| unnamed protein product [Vitis vinifera]              615   e-173

>ref|XP_002284797.2| PREDICTED: tRNA pseudouridine synthase A, mitochondrial-like [Vitis
            vinifera]
          Length = 503

 Score =  660 bits (1703), Expect = 0.0
 Identities = 342/505 (67%), Positives = 395/505 (78%), Gaps = 20/505 (3%)
 Frame = -3

Query: 1788 EPEPKKLKMXXXXXXXXXXXXXXXXXXXXXTQNPRYKRRKIAIFFAYCGVGYQGMQKNPG 1609
            EP+PK+ KM                      + PRYKRRKIAIFFAYCGVGYQGMQKNPG
Sbjct: 5    EPDPKRPKMSQTTTTSDDEDCDTTTAT----KKPRYKRRKIAIFFAYCGVGYQGMQKNPG 60

Query: 1608 AKTIEGDLEEALYLSGAVPETDRGKPKRFDFARSARTDKGVSAVGQVVSGRFYIDPPGLI 1429
            AKTIEGDLEEAL+ SGAVPE DRG PKRFD+ARSARTDKGVSAVGQVVSGRFYIDPPGL+
Sbjct: 61   AKTIEGDLEEALFFSGAVPEQDRGHPKRFDWARSARTDKGVSAVGQVVSGRFYIDPPGLV 120

Query: 1428 DRLNSNLPHQIRIFGFKRATASFNAKKFCDRRRYVYLIPVFALDPNSHPDRESVLASLGS 1249
            +RLNSNLP QIRIFGFKR TASFNAKKFCDRRRYVYLIPVFALDP+SHPDRESVLAS+GS
Sbjct: 121  ERLNSNLPPQIRIFGFKRVTASFNAKKFCDRRRYVYLIPVFALDPSSHPDRESVLASVGS 180

Query: 1248 ENQLVKCLECSERGRKVFGVMGRRNSESNI---------GEN----GVSIVSQIEGETES 1108
            EN+LVKCLECSERGRKV G+MG+R+ ES +         GE+    G +I+   E + ES
Sbjct: 181  ENELVKCLECSERGRKVVGIMGKRSFESKVSVDDREDVEGESKNIVGAAILKS-EAKEES 239

Query: 1107 GFSLENNVVAVSNSETTLDSTVSQ----SEIVVDPRVSLEEEKLDENLVQCNNGEGK--- 949
              S +N     S S+   +    Q    SE   D R S + E    +  Q + GE K   
Sbjct: 240  MASSDNRHDGNSISQPIKEGRCFQDNETSESTPDSRASAQNEPGVSHSEQSDKGENKLEK 299

Query: 948  GSGFCYGEKEKERFNRILNHYVGTHNFHNFTTRTKAEDPSAKRYILSFEANVIVTVEGID 769
            GSGFCYG+KE+ERFNRIL HYVGTHNFHNFTTR KAEDPSA+R+I+SF+ N IVTVEGI+
Sbjct: 300  GSGFCYGDKERERFNRILGHYVGTHNFHNFTTRIKAEDPSAQRFIVSFDGNTIVTVEGIE 359

Query: 768  FVKCEVVGQSFMLHQIRKLIGLAVSVMRNCTPELLIDTALQQDVNINVPTAPEVGLYLDE 589
            FVKCEVVGQSFMLHQIRK+IGLAV++MRN  PE L++TAL +DVNINVPTAPEVGLYLDE
Sbjct: 360  FVKCEVVGQSFMLHQIRKMIGLAVAIMRNVAPESLLETALLKDVNINVPTAPEVGLYLDE 419

Query: 588  CFFTSYNQKWKDTHEEISMKDYAEEAEDFKMKQIYSHIASTEHKEGAVALWLHSLNHRNY 409
            CFF+SYN+KW+D+HEE+SMK YAEEAE+FKMK +YSHIA+TEHKEG VALWLHSLNHRNY
Sbjct: 420  CFFSSYNKKWRDSHEEVSMKAYAEEAEEFKMKHVYSHIAATEHKEGVVALWLHSLNHRNY 479

Query: 408  PDLRVVEANEVHSNEENAQFDTVAE 334
            PDL + + N   S+ +N + +T+A+
Sbjct: 480  PDLCIGD-NGAASDGKNGEEETMAD 503


>ref|XP_004145528.1| PREDICTED: tRNA pseudouridine synthase A, mitochondrial-like [Cucumis
            sativus]
          Length = 519

 Score =  644 bits (1661), Expect = 0.0
 Identities = 336/507 (66%), Positives = 393/507 (77%), Gaps = 21/507 (4%)
 Frame = -3

Query: 1803 SPPRV---EPEPKKLKMXXXXXXXXXXXXXXXXXXXXXTQNPRYKRRKIAIFFAYCGVGY 1633
            SPP+    EP+PKKLKM                      +  RYKRRK+AIFFAYCGVGY
Sbjct: 12   SPPQPLIEEPQPKKLKMSSTTTTSDDEDVNSNSAAP---KKQRYKRRKVAIFFAYCGVGY 68

Query: 1632 QGMQKNPGAKTIEGDLEEALYLSGAVPETDRGKPKRFDFARSARTDKGVSAVGQVVSGRF 1453
            QGMQKNPGAKTIE DLEEALYL+GAVPE DRG  KR+D+ARSARTDKGVSAVGQVVSGRF
Sbjct: 69   QGMQKNPGAKTIEADLEEALYLAGAVPEQDRGLSKRYDWARSARTDKGVSAVGQVVSGRF 128

Query: 1452 YIDPPGLIDRLNSNLPHQIRIFGFKRATASFNAKKFCDRRRYVYLIPVFALDPNSHPDRE 1273
            YIDPPG +DRLNSNL  QIRIFG+KR TASFNAKKFCDRRRYVYLIPVFALDPN H DRE
Sbjct: 129  YIDPPGFVDRLNSNLSPQIRIFGYKRVTASFNAKKFCDRRRYVYLIPVFALDPNCHRDRE 188

Query: 1272 SVLASLGSENQLVKCLECSERGRKVFGVMGRRN-------SESNIGENGVSIVSQIEGET 1114
            SV ASLGS+N+LVKCLECSERGRKV G++G+RN       +ES+I  N V+ + ++    
Sbjct: 189  SVKASLGSDNELVKCLECSERGRKVEGLIGKRNFEVKTAITESDISSNTVNAI-EVSDVQ 247

Query: 1113 ESGFSLENNVVAVSNSETTL--DSTVSQSEIVVDPRVSLEEEKL-----DENLV---QCN 964
             +G   ++   + SN +T++  ++T ++  +  +     E  ++     D  +V   +  
Sbjct: 248  ANGVLEDSATTSDSNKQTSVLVENTATELNVGSEGTAKSESSEMSGLGSDSEIVVSKESV 307

Query: 963  NGEGKGSG-FCYGEKEKERFNRILNHYVGTHNFHNFTTRTKAEDPSAKRYILSFEANVIV 787
            NG+ K SG F YGE+EK RFNRIL HYVGTHNFHNFTTRTKAEDP+A+R+I+SF+A+ IV
Sbjct: 308  NGKEKSSGSFKYGEEEKARFNRILKHYVGTHNFHNFTTRTKAEDPAARRFIVSFDASAIV 367

Query: 786  TVEGIDFVKCEVVGQSFMLHQIRKLIGLAVSVMRNCTPELLIDTALQQDVNINVPTAPEV 607
             VEGI+FVKCEVVGQSFMLHQIRK++GLAV++MRNC PE LI+ ALQ+DVNINVPTAPEV
Sbjct: 368  VVEGIEFVKCEVVGQSFMLHQIRKMMGLAVAIMRNCAPESLIEKALQKDVNINVPTAPEV 427

Query: 606  GLYLDECFFTSYNQKWKDTHEEISMKDYAEEAEDFKMKQIYSHIASTEHKEGAVALWLHS 427
            GLYLDEC FTSYNQKWKDTHEE+SMK Y E AEDFKMKQIYSHIASTEHK+GAVALWLHS
Sbjct: 428  GLYLDECLFTSYNQKWKDTHEEVSMKAYEEAAEDFKMKQIYSHIASTEHKDGAVALWLHS 487

Query: 426  LNHRNYPDLRVVEANEVHSNEENAQFD 346
            LNHRNYPDLRV++  EV    +NA  D
Sbjct: 488  LNHRNYPDLRVID--EVAKIAKNASLD 512


>ref|XP_004157082.1| PREDICTED: LOW QUALITY PROTEIN: tRNA pseudouridine synthase A,
            mitochondrial-like [Cucumis sativus]
          Length = 519

 Score =  642 bits (1656), Expect = 0.0
 Identities = 335/507 (66%), Positives = 392/507 (77%), Gaps = 21/507 (4%)
 Frame = -3

Query: 1803 SPPRV---EPEPKKLKMXXXXXXXXXXXXXXXXXXXXXTQNPRYKRRKIAIFFAYCGVGY 1633
            SPP+    EP+PKKLKM                      +  RYKRRK+A FFAYCGVGY
Sbjct: 12   SPPQPLIEEPQPKKLKMSSTTTTSDDEDVNSNSAAP---KKQRYKRRKVAXFFAYCGVGY 68

Query: 1632 QGMQKNPGAKTIEGDLEEALYLSGAVPETDRGKPKRFDFARSARTDKGVSAVGQVVSGRF 1453
            QGMQKNPGAKTIE DLEEALYL+GAVPE DRG  KR+D+ARSARTDKGVSAVGQVVSGRF
Sbjct: 69   QGMQKNPGAKTIEADLEEALYLAGAVPEQDRGLSKRYDWARSARTDKGVSAVGQVVSGRF 128

Query: 1452 YIDPPGLIDRLNSNLPHQIRIFGFKRATASFNAKKFCDRRRYVYLIPVFALDPNSHPDRE 1273
            YIDPPG +DRLNSNL  QIRIFG+KR TASFNAKKFCDRRRYVYLIPVFALDPN H DRE
Sbjct: 129  YIDPPGFVDRLNSNLSPQIRIFGYKRVTASFNAKKFCDRRRYVYLIPVFALDPNCHRDRE 188

Query: 1272 SVLASLGSENQLVKCLECSERGRKVFGVMGRRN-------SESNIGENGVSIVSQIEGET 1114
            SV ASLGS+N+LVKCLECSERGRKV G++G+RN       +ES+I  N V+ + ++    
Sbjct: 189  SVKASLGSDNELVKCLECSERGRKVEGLIGKRNFEVKTAITESDISSNTVNAI-EVSDVQ 247

Query: 1113 ESGFSLENNVVAVSNSETTL--DSTVSQSEIVVDPRVSLEEEKL-----DENLV---QCN 964
             +G   ++   + SN +T++  ++T ++  +  +     E  ++     D  +V   +  
Sbjct: 248  ANGVLEDSATTSDSNKQTSVLVENTATELNVGSEGTAKSESSEMSGLGSDSEIVVSKESV 307

Query: 963  NGEGKGSG-FCYGEKEKERFNRILNHYVGTHNFHNFTTRTKAEDPSAKRYILSFEANVIV 787
            NG+ K SG F YGE+EK RFNRIL HYVGTHNFHNFTTRTKAEDP+A+R+I+SF+A+ IV
Sbjct: 308  NGKEKSSGSFKYGEEEKARFNRILKHYVGTHNFHNFTTRTKAEDPAARRFIVSFDASAIV 367

Query: 786  TVEGIDFVKCEVVGQSFMLHQIRKLIGLAVSVMRNCTPELLIDTALQQDVNINVPTAPEV 607
             VEGI+FVKCEVVGQSFMLHQIRK++GLAV++MRNC PE LI+ ALQ+DVNINVPTAPEV
Sbjct: 368  VVEGIEFVKCEVVGQSFMLHQIRKMMGLAVAIMRNCAPESLIEKALQKDVNINVPTAPEV 427

Query: 606  GLYLDECFFTSYNQKWKDTHEEISMKDYAEEAEDFKMKQIYSHIASTEHKEGAVALWLHS 427
            GLYLDEC FTSYNQKWKDTHEE+SMK Y E AEDFKMKQIYSHIASTEHK+GAVALWLHS
Sbjct: 428  GLYLDECLFTSYNQKWKDTHEEVSMKAYEEAAEDFKMKQIYSHIASTEHKDGAVALWLHS 487

Query: 426  LNHRNYPDLRVVEANEVHSNEENAQFD 346
            LNHRNYPDLRV++  EV    +NA  D
Sbjct: 488  LNHRNYPDLRVID--EVAKIAKNASLD 512


>gb|ADN34131.1| tRNA pseudouridine synthase family protein [Cucumis melo subsp. melo]
          Length = 519

 Score =  641 bits (1653), Expect = 0.0
 Identities = 334/511 (65%), Positives = 392/511 (76%), Gaps = 21/511 (4%)
 Frame = -3

Query: 1803 SPPRV---EPEPKKLKMXXXXXXXXXXXXXXXXXXXXXTQNPRYKRRKIAIFFAYCGVGY 1633
            SPP+    EP+PKKLKM                      +  RYKRRK+AIFFAYCGVGY
Sbjct: 12   SPPQPLIEEPDPKKLKMSSTTTTSDDEDVNSNSAAP---KKQRYKRRKVAIFFAYCGVGY 68

Query: 1632 QGMQKNPGAKTIEGDLEEALYLSGAVPETDRGKPKRFDFARSARTDKGVSAVGQVVSGRF 1453
            QGMQKNPGAKTIE DLEEALYL+GAVPE DRG  KR+D+ARSARTDKGVSAVGQVVSGRF
Sbjct: 69   QGMQKNPGAKTIEADLEEALYLAGAVPEQDRGLSKRYDWARSARTDKGVSAVGQVVSGRF 128

Query: 1452 YIDPPGLIDRLNSNLPHQIRIFGFKRATASFNAKKFCDRRRYVYLIPVFALDPNSHPDRE 1273
            YIDPPG +DRLNSNL  QIRIFG+KR TASFNAKKFCDRRRYVYLIPVFALDPN H DRE
Sbjct: 129  YIDPPGFVDRLNSNLSPQIRIFGYKRVTASFNAKKFCDRRRYVYLIPVFALDPNCHRDRE 188

Query: 1272 SVLASLGSENQLVKCLECSERGRKVFGVMGRRN-------SESNIGENGVSIVSQIEGET 1114
            SV ASLGS+N+LVKCLECSERGRKV G+MG+RN       +ES+I  N V+ + ++    
Sbjct: 189  SVKASLGSDNELVKCLECSERGRKVEGLMGKRNFEVKTAITESDISSNIVNAI-EVSDVQ 247

Query: 1113 ESGFSLENNVVAVSNSETTL--DSTVSQSEIVVDPRVSLEEEKL-----DENLV---QCN 964
             +G   ++   + SN +T++  ++T ++  +  +     E  ++     D  +V   +  
Sbjct: 248  ANGVLEDSATTSDSNKQTSVLVENTATELTVASEGIAKSESSEMSGLGNDSEIVVSKESV 307

Query: 963  NGEGKGSG-FCYGEKEKERFNRILNHYVGTHNFHNFTTRTKAEDPSAKRYILSFEANVIV 787
            NG+ K SG F YGE+EK RFNRIL HYVGTHNFHNFTTRTKAEDP+A+R+I+SF+A+  V
Sbjct: 308  NGKEKPSGSFKYGEEEKARFNRILKHYVGTHNFHNFTTRTKAEDPAARRFIVSFDASTTV 367

Query: 786  TVEGIDFVKCEVVGQSFMLHQIRKLIGLAVSVMRNCTPELLIDTALQQDVNINVPTAPEV 607
             VEGI+FVKCEVVGQSFMLHQIRK++GLAV++MRNC PE LI+ ALQ+DVNINVPTAPEV
Sbjct: 368  VVEGIEFVKCEVVGQSFMLHQIRKMMGLAVAIMRNCAPESLIEKALQKDVNINVPTAPEV 427

Query: 606  GLYLDECFFTSYNQKWKDTHEEISMKDYAEEAEDFKMKQIYSHIASTEHKEGAVALWLHS 427
            GLYLDEC FTSYNQKWKDTHEE+SMK Y E AEDFKMKQIYSHIASTEHK+GAVALWLHS
Sbjct: 428  GLYLDECLFTSYNQKWKDTHEEVSMKAYEEVAEDFKMKQIYSHIASTEHKDGAVALWLHS 487

Query: 426  LNHRNYPDLRVVEANEVHSNEENAQFDTVAE 334
            LNHRNYPDLRV++     +   +   +T AE
Sbjct: 488  LNHRNYPDLRVIDEVAKIAKNTSVDMETQAE 518


>ref|XP_003519139.1| PREDICTED: tRNA pseudouridine synthase A, mitochondrial-like isoform
            X1 [Glycine max]
          Length = 548

 Score =  639 bits (1647), Expect = e-180
 Identities = 341/526 (64%), Positives = 390/526 (74%), Gaps = 32/526 (6%)
 Frame = -3

Query: 1845 MENSSKSN*TMDSTSPPRV---EPEPKKLKMXXXXXXXXXXXXXXXXXXXXXTQNPRYKR 1675
            MENS  +  +     PP V   EPEPKKLKM                         RYKR
Sbjct: 1    MENSDTTLTSSSLPPPPPVSAEEPEPKKLKMSTTTSDDEETGT-----------KKRYKR 49

Query: 1674 RKIAIFFAYCGVGYQGMQKNPGAKTIEGDLEEALYLSGAVPETDRGKPKRFDFARSARTD 1495
            RK+AIFFAYCGVGYQGMQKNPGAKTIEGDLEEALY+SGAVPE DRG PKR+D+ARSARTD
Sbjct: 50   RKVAIFFAYCGVGYQGMQKNPGAKTIEGDLEEALYVSGAVPEQDRGVPKRYDWARSARTD 109

Query: 1494 KGVSAVGQVVSGRFYIDPPGLIDRLNSNLPHQIRIFGFKRATASFNAKKFCDRRRYVYLI 1315
            KGVSAVGQVVSGRFYIDPPGL+DRLNSNLP QIRIFG+KR TASFNAKKFCDRRRYVYLI
Sbjct: 110  KGVSAVGQVVSGRFYIDPPGLVDRLNSNLPSQIRIFGYKRVTASFNAKKFCDRRRYVYLI 169

Query: 1314 PVFALDPNSHPDRESVLASLGSENQLVKCLECSERGRKVFGVMGRRNSESNIGENGVSIV 1135
            PVFALDP+ H DRE+V+ASLGS N+LVKCLECSERGRKV G++G  N + N+    V + 
Sbjct: 170  PVFALDPSCHRDRETVMASLGSGNELVKCLECSERGRKVVGLVG--NRKQNLELEAVDVE 227

Query: 1134 SQIEGETESGFSLENNVVAVS-------------------NSETTLDSTVSQSE------ 1030
            + I    +SG + E+  V++S                   N +T L++ +   E      
Sbjct: 228  AGISSNRDSGVT-EDVEVSLSKGDDNHLNEESGNDNKGGMNCKTGLETVIPVQEEGTPLN 286

Query: 1029 -IVVDPRVSLEEEKLDENLVQCNNGEGK---GSGFCYGEKEKERFNRILNHYVGTHNFHN 862
               V+    LEEEK+        NGE K   GS FCYGEKE+ERFN+IL  +VGTHNFHN
Sbjct: 287  GESVNNSDILEEEKV--------NGEDKPTNGSRFCYGEKERERFNKILKCFVGTHNFHN 338

Query: 861  FTTRTKAEDPSAKRYILSFEANVIVTVEGIDFVKCEVVGQSFMLHQIRKLIGLAVSVMRN 682
            FTTRTKAEDP+A+RYI+SF AN  + VEG++FVKCEVVGQSFMLHQIRK+IGLAV++MRN
Sbjct: 339  FTTRTKAEDPAARRYIISFNANTTLVVEGVEFVKCEVVGQSFMLHQIRKMIGLAVAIMRN 398

Query: 681  CTPELLIDTALQQDVNINVPTAPEVGLYLDECFFTSYNQKWKDTHEEISMKDYAEEAEDF 502
            C PE LID ALQQDVNINVPTAPEVGLYLDECFFTSYNQKWKD HEE+SMK Y +EA++F
Sbjct: 399  CAPESLIDEALQQDVNINVPTAPEVGLYLDECFFTSYNQKWKD-HEELSMKAYEKEADEF 457

Query: 501  KMKQIYSHIASTEHKEGAVALWLHSLNHRNYPDLRVVEANEVHSNE 364
            KMK IYSHIASTE KEG VALWLHSLNHRNYPDLRV+    + +N+
Sbjct: 458  KMKYIYSHIASTEQKEGTVALWLHSLNHRNYPDLRVINEEAIPNNK 503


>ref|XP_002307759.2| hypothetical protein POPTR_0005s26830g [Populus trichocarpa]
            gi|550339814|gb|EEE94755.2| hypothetical protein
            POPTR_0005s26830g [Populus trichocarpa]
          Length = 497

 Score =  634 bits (1635), Expect = e-179
 Identities = 328/494 (66%), Positives = 381/494 (77%), Gaps = 2/494 (0%)
 Frame = -3

Query: 1809 STSPPRV-EPEPKKLKMXXXXXXXXXXXXXXXXXXXXXTQNPRYKRRKIAIFFAYCGVGY 1633
            +TSPPR  EP+ K+ KM                      +  RYKRRKIAIF  YCGVGY
Sbjct: 9    TTSPPRQQEPDLKRPKMSTTTSEDEDAATTTPGDDTTIKKQ-RYKRRKIAIFLTYCGVGY 67

Query: 1632 QGMQKNPGAKTIEGDLEEALYLSGAVPETDRGKPKRFDFARSARTDKGVSAVGQVVSGRF 1453
            QGMQKNPGAKTIEGDLEEAL+ +GAVPE DRG PKR+D+ARSARTDKGVSAVGQVVSGRF
Sbjct: 68   QGMQKNPGAKTIEGDLEEALFHAGAVPEHDRGIPKRYDWARSARTDKGVSAVGQVVSGRF 127

Query: 1452 YIDPPGLIDRLNSNLPHQIRIFGFKRATASFNAKKFCDRRRYVYLIPVFALDPNSHPDRE 1273
            YIDPPGL++RL+SNL  QIRIFG+KR T SFNAKKFCDRRRYVYLIPVFAL+P SH DRE
Sbjct: 128  YIDPPGLVERLHSNLSPQIRIFGYKRVTGSFNAKKFCDRRRYVYLIPVFALNPCSHRDRE 187

Query: 1272 SVLASLGSENQLVKCLECSERGRKVFGVMGRRNSESNIGENGVSIVSQIEGETESGFSLE 1093
            SVLASLGS ++LVKCL+CSERGRKV G +G+R+ ES    +   I S  + +T     ++
Sbjct: 188  SVLASLGSGSELVKCLQCSERGRKVVGAVGKRSFESKSDVSPTEIWSN-DKDTTLKSEIK 246

Query: 1092 NNVVAVSNSETTLDSTVSQSEIVVDPRVSLEEEKLDENLVQCNNGEGKGSGFCYGEKEKE 913
              V   SNSE    +   + EI+V        E  D+   +      KGSGFCYGEKEKE
Sbjct: 247  EEVSISSNSEDANANPEIKDEIMVSI------ENGDDKNTKSEEEAIKGSGFCYGEKEKE 300

Query: 912  RFNRILNHYVGTHNFHNFTTRTKAEDPSAKRYILSFEANVIVTVEGIDFVKCEVVGQSFM 733
            RFNRILN+Y+G+HNFHNFTTRTKAEDPSA+RYI+SF+A   V VEGI+FVKCEVVGQSFM
Sbjct: 301  RFNRILNYYLGSHNFHNFTTRTKAEDPSAQRYIISFDAKTTVAVEGIEFVKCEVVGQSFM 360

Query: 732  LHQIRKLIGLAVSVMRNCTPELLIDTALQQDVNINVPTAPEVGLYLDECFFTSYNQKWKD 553
            LHQIRK+IG+AV++MRNC  E LI TALQ++VNINVPTAPEVGLYLDECFFTSYNQKWKD
Sbjct: 361  LHQIRKMIGVAVAIMRNCASESLIQTALQKNVNINVPTAPEVGLYLDECFFTSYNQKWKD 420

Query: 552  THEEISMKDYAEEAEDFKMKQIYSHIASTEHKEGAVALWLHSLNHRNYPDLRVVE-ANEV 376
            +HEE+SMKDY EEAE+FKMK IYSHIA+TEHKEG+VALWLHSLNHRNYPDLR  +  + +
Sbjct: 421  SHEELSMKDYEEEAEEFKMKHIYSHIATTEHKEGSVALWLHSLNHRNYPDLRACDNGDNI 480

Query: 375  HSNEENAQFDTVAE 334
             S + N +  T+ E
Sbjct: 481  TSEDNNGRESTMVE 494


>ref|XP_007154900.1| hypothetical protein PHAVU_003G157400g [Phaseolus vulgaris]
            gi|593783723|ref|XP_007154902.1| hypothetical protein
            PHAVU_003G157400g [Phaseolus vulgaris]
            gi|561028254|gb|ESW26894.1| hypothetical protein
            PHAVU_003G157400g [Phaseolus vulgaris]
            gi|561028256|gb|ESW26896.1| hypothetical protein
            PHAVU_003G157400g [Phaseolus vulgaris]
          Length = 586

 Score =  632 bits (1630), Expect = e-178
 Identities = 337/524 (64%), Positives = 388/524 (74%), Gaps = 30/524 (5%)
 Frame = -3

Query: 1845 MENSSKSN*TMDSTSPPRV---EPEPKKLKMXXXXXXXXXXXXXXXXXXXXXTQNPRYKR 1675
            MENS  +  T     PP +   EPEPKKLKM                         RYKR
Sbjct: 1    MENSDTALTTSSLPPPPPLAAEEPEPKKLKMSTTSDDEECTTAPGA--------KKRYKR 52

Query: 1674 RKIAIFFAYCGVGYQGMQKNPGAKTIEGDLEEALYLSGAVPETDRGKPKRFDFARSARTD 1495
            RKIAIFFAYCGVGYQGMQKNPGAKTIEGDLEEALY+SGAVPE DRG PKR+D+ARSARTD
Sbjct: 53   RKIAIFFAYCGVGYQGMQKNPGAKTIEGDLEEALYVSGAVPEHDRGIPKRYDWARSARTD 112

Query: 1494 KGVSAVGQVVSGRFYIDPPGLIDRLNSNLPHQIRIFGFKRATASFNAKKFCDRRRYVYLI 1315
            KGVSAVGQVVSGRFYIDPPGL+DRLNSNL  QIRIFG+KR T SFNAKKFCDRRRYVYLI
Sbjct: 113  KGVSAVGQVVSGRFYIDPPGLVDRLNSNLHSQIRIFGYKRVTGSFNAKKFCDRRRYVYLI 172

Query: 1314 PVFALDPNSHPDRESVLASLGSENQLVKCLECSERGRKVFGVMGRR---------NSESN 1162
            PVFALDP  H DRE+V+ASLGS N+LVKCLECSERGRKV G++G R         + E+ 
Sbjct: 173  PVFALDPCCHRDRETVMASLGSTNELVKCLECSERGRKVVGLVGNRKHNLELEAMDVEAG 232

Query: 1161 IGEN-GVSIVSQIEGETESGFSL--ENNVVAVSNSE---------TTLDSTVSQSEIVVD 1018
            I  N  V + S + G+ E+  S   +N++   S  +         T L + + +   V D
Sbjct: 233  ISSNTDVVLDSVVTGDVEASLSKGDDNHLNGESGIDNKGKVLVDGTNLKTGIEKGIPVQD 292

Query: 1017 PRVSLEEEKLDENLV---QCNNGEGK---GSGFCYGEKEKERFNRILNHYVGTHNFHNFT 856
              + L  E ++ + +   +  NGE K   GS FCYGEKE+ERFN+ILN +VGTHNFHNFT
Sbjct: 293  EVMPLNGESVNNSDIIEEEKMNGEDKSTSGSMFCYGEKERERFNKILNCFVGTHNFHNFT 352

Query: 855  TRTKAEDPSAKRYILSFEANVIVTVEGIDFVKCEVVGQSFMLHQIRKLIGLAVSVMRNCT 676
            TRTKAEDP+A+RYI+SF AN    VEGI+FVKCEVVGQSFMLHQIRK++GLAV++MRNC 
Sbjct: 353  TRTKAEDPAARRYIISFNANTAFAVEGIEFVKCEVVGQSFMLHQIRKMMGLAVAIMRNCA 412

Query: 675  PELLIDTALQQDVNINVPTAPEVGLYLDECFFTSYNQKWKDTHEEISMKDYAEEAEDFKM 496
            PE LI+ ALQQDVNINVPTAPEVGLYLDECFF+SYNQKWKD+HEE+SMK Y +EAE+FKM
Sbjct: 413  PESLINKALQQDVNINVPTAPEVGLYLDECFFSSYNQKWKDSHEELSMKAYEKEAEEFKM 472

Query: 495  KQIYSHIASTEHKEGAVALWLHSLNHRNYPDLRVVEANEVHSNE 364
            K IYSHI+ TE KEG VALWLHSLNHRNYPDLRVV    +  N+
Sbjct: 473  KYIYSHISFTEQKEGTVALWLHSLNHRNYPDLRVVNEEAITDNK 516


>ref|XP_006575306.1| PREDICTED: tRNA pseudouridine synthase A, mitochondrial-like isoform
            X2 [Glycine max]
          Length = 518

 Score =  629 bits (1623), Expect = e-177
 Identities = 325/470 (69%), Positives = 372/470 (79%), Gaps = 29/470 (6%)
 Frame = -3

Query: 1686 RYKRRKIAIFFAYCGVGYQGMQKNPGAKTIEGDLEEALYLSGAVPETDRGKPKRFDFARS 1507
            RYKRRK+AIFFAYCGVGYQGMQKNPGAKTIEGDLEEALY+SGAVPE DRG PKR+D+ARS
Sbjct: 16   RYKRRKVAIFFAYCGVGYQGMQKNPGAKTIEGDLEEALYVSGAVPEQDRGVPKRYDWARS 75

Query: 1506 ARTDKGVSAVGQVVSGRFYIDPPGLIDRLNSNLPHQIRIFGFKRATASFNAKKFCDRRRY 1327
            ARTDKGVSAVGQVVSGRFYIDPPGL+DRLNSNLP QIRIFG+KR TASFNAKKFCDRRRY
Sbjct: 76   ARTDKGVSAVGQVVSGRFYIDPPGLVDRLNSNLPSQIRIFGYKRVTASFNAKKFCDRRRY 135

Query: 1326 VYLIPVFALDPNSHPDRESVLASLGSENQLVKCLECSERGRKVFGVMGRRNSESNIGENG 1147
            VYLIPVFALDP+ H DRE+V+ASLGS N+LVKCLECSERGRKV G++G  N + N+    
Sbjct: 136  VYLIPVFALDPSCHRDRETVMASLGSGNELVKCLECSERGRKVVGLVG--NRKQNLELEA 193

Query: 1146 VSIVSQIEGETESGFSLENNVVAVS-------------------NSETTLDSTVSQSE-- 1030
            V + + I    +SG + E+  V++S                   N +T L++ +   E  
Sbjct: 194  VDVEAGISSNRDSGVT-EDVEVSLSKGDDNHLNEESGNDNKGGMNCKTGLETVIPVQEEG 252

Query: 1029 -----IVVDPRVSLEEEKLDENLVQCNNGEGK---GSGFCYGEKEKERFNRILNHYVGTH 874
                   V+    LEEEK+        NGE K   GS FCYGEKE+ERFN+IL  +VGTH
Sbjct: 253  TPLNGESVNNSDILEEEKV--------NGEDKPTNGSRFCYGEKERERFNKILKCFVGTH 304

Query: 873  NFHNFTTRTKAEDPSAKRYILSFEANVIVTVEGIDFVKCEVVGQSFMLHQIRKLIGLAVS 694
            NFHNFTTRTKAEDP+A+RYI+SF AN  + VEG++FVKCEVVGQSFMLHQIRK+IGLAV+
Sbjct: 305  NFHNFTTRTKAEDPAARRYIISFNANTTLVVEGVEFVKCEVVGQSFMLHQIRKMIGLAVA 364

Query: 693  VMRNCTPELLIDTALQQDVNINVPTAPEVGLYLDECFFTSYNQKWKDTHEEISMKDYAEE 514
            +MRNC PE LID ALQQDVNINVPTAPEVGLYLDECFFTSYNQKWKD HEE+SMK Y +E
Sbjct: 365  IMRNCAPESLIDEALQQDVNINVPTAPEVGLYLDECFFTSYNQKWKD-HEELSMKAYEKE 423

Query: 513  AEDFKMKQIYSHIASTEHKEGAVALWLHSLNHRNYPDLRVVEANEVHSNE 364
            A++FKMK IYSHIASTE KEG VALWLHSLNHRNYPDLRV+    + +N+
Sbjct: 424  ADEFKMKYIYSHIASTEQKEGTVALWLHSLNHRNYPDLRVINEEAIPNNK 473


>ref|XP_004507719.1| PREDICTED: tRNA pseudouridine synthase A, mitochondrial-like isoform
            X1 [Cicer arietinum]
          Length = 505

 Score =  626 bits (1615), Expect = e-176
 Identities = 330/515 (64%), Positives = 385/515 (74%), Gaps = 11/515 (2%)
 Frame = -3

Query: 1845 MENSSKSN*TMDSTSPPRV---EPEPKKLKMXXXXXXXXXXXXXXXXXXXXXTQNPRYKR 1675
            MENS K   ++    P  V   EP+ KK KM                         RYKR
Sbjct: 1    MENSDKCPSSLSPLPPTPVIAEEPQTKKAKMSTTTSDDEECTAAAGTKV-------RYKR 53

Query: 1674 RKIAIFFAYCGVGYQGMQKNPGAKTIEGDLEEALYLSGAVPETDRGKPKRFDFARSARTD 1495
            RK+AI FAYCGVGYQGMQKNPGAKTIEG++EEALY+SGAVPE DRG  KR+D+ARSARTD
Sbjct: 54   RKVAILFAYCGVGYQGMQKNPGAKTIEGEIEEALYVSGAVPEQDRGMSKRYDWARSARTD 113

Query: 1494 KGVSAVGQVVSGRFYIDPPGLIDRLNSNLPHQIRIFGFKRATASFNAKKFCDRRRYVYLI 1315
            KGVSAVGQVVSGRFYIDPPG +DRLNSNLP QIRIFG+KR TASF+AKKFCDRRRYVYLI
Sbjct: 114  KGVSAVGQVVSGRFYIDPPGFVDRLNSNLPSQIRIFGYKRVTASFSAKKFCDRRRYVYLI 173

Query: 1314 PVFALDPNSHPDRESVLASLGSENQLVKCLECSERGRKVFGVMGRRNSESNIGENGVSIV 1135
            PVFALDP  H DRE+VLASLGSEN+LVKCLECSERGRKV G++G  NS+ N+    + + 
Sbjct: 174  PVFALDPCCHRDRETVLASLGSENELVKCLECSERGRKVEGLVG--NSKRNLELEAMDVE 231

Query: 1134 SQIEGETESGF--SLENNVVAVS----NSETTLDSTVSQSEIVVDPRVSLEEEK--LDEN 979
            +  +G+       S+ +N   VS    NS+T+ ++ VS  + V       E     L+E 
Sbjct: 232  TTDKGDDNRSNKESINDNEGKVSVEDVNSKTSFETVVSGQDEVSPLNGGSENNSAVLEEE 291

Query: 978  LVQCNNGEGKGSGFCYGEKEKERFNRILNHYVGTHNFHNFTTRTKAEDPSAKRYILSFEA 799
             V   +   K S FCYGEKE+ERFN+IL  YVGTHNFHNFTTR K EDPSAKR+I+SF+A
Sbjct: 292  KVNGEDTPAKRSEFCYGEKERERFNKILKSYVGTHNFHNFTTRIKPEDPSAKRFIISFDA 351

Query: 798  NVIVTVEGIDFVKCEVVGQSFMLHQIRKLIGLAVSVMRNCTPELLIDTALQQDVNINVPT 619
            +  V +EG++FVKCE+VGQSFMLHQIRK++GLAV++MRNC PE LI+ ALQ DV+I VPT
Sbjct: 352  SNTVVIEGMEFVKCEIVGQSFMLHQIRKMMGLAVAIMRNCAPESLIEKALQTDVSITVPT 411

Query: 618  APEVGLYLDECFFTSYNQKWKDTHEEISMKDYAEEAEDFKMKQIYSHIASTEHKEGAVAL 439
            APEVGLYLDECFFTSYNQKWKDTHEE+SMK Y +EAEDFKMK IYSHIASTE KEG V L
Sbjct: 412  APEVGLYLDECFFTSYNQKWKDTHEEVSMKAYEKEAEDFKMKFIYSHIASTEQKEGTVGL 471

Query: 438  WLHSLNHRNYPDLRVVEANEVHSNEENAQFDTVAE 334
            WLHSLNHRNY DLRVVE   V +NE+ ++ + VAE
Sbjct: 472  WLHSLNHRNYSDLRVVEEEGV-ANEKKSEIEVVAE 505


>ref|XP_006435279.1| hypothetical protein CICLE_v10000838mg [Citrus clementina]
            gi|557537401|gb|ESR48519.1| hypothetical protein
            CICLE_v10000838mg [Citrus clementina]
          Length = 526

 Score =  625 bits (1612), Expect = e-176
 Identities = 333/522 (63%), Positives = 394/522 (75%), Gaps = 33/522 (6%)
 Frame = -3

Query: 1845 MENSSKSN*TMDSTS-PPRVEPEPKKLKMXXXXXXXXXXXXXXXXXXXXXTQNPRY-KRR 1672
            MEN+  +   + S S  PR EP+PK+LKM                     T   +  KRR
Sbjct: 1    MENAETNTEKLPSPSLSPRQEPDPKRLKMSATSTSDDERDLIPAAAGADSTTKRQLCKRR 60

Query: 1671 KIAIFFAYCGVGYQGMQKNPGAKTIEGDLEEALYLSGAVPETDRGKPKRFDFARSARTDK 1492
            KIAIFFAYCGVGYQGMQKNPGAKTIEGDLEEAL+ SGAV E DRG P+R+D+ARSARTDK
Sbjct: 61   KIAIFFAYCGVGYQGMQKNPGAKTIEGDLEEALFHSGAVSERDRGNPRRYDWARSARTDK 120

Query: 1491 GVSAVGQVVSGRFYIDPPGLIDRLNSNLPHQIRIFGFKRATASFNAKKFCDRRRYVYLIP 1312
            GVSAVGQVVSGRF IDPPGL++RLNSNLP QIRIFG+KR TASFNAKKFCD+RRYVYL+P
Sbjct: 121  GVSAVGQVVSGRFCIDPPGLVERLNSNLPTQIRIFGYKRVTASFNAKKFCDQRRYVYLLP 180

Query: 1311 VFALDPNSHPDRESVLASLGSENQLVKCLECSERGRKVFGVMGRRNSESNIGEN--GVSI 1138
            VFALD +SH DRESV+ASLGS N+LVKCLECSERGRKV GVMG+R  +  +  N    S+
Sbjct: 181  VFALDSSSHRDRESVMASLGSGNELVKCLECSERGRKVIGVMGKRTYQLGLPSNDENASL 240

Query: 1137 VSQIEGETE----SGFSLENNVVAVSNSETTLDSTV-------SQSEIVVDPRVS--LEE 997
             SQ++ +T     +G     N+ +V +++T  +S +       S +E +V+ R S  ++ 
Sbjct: 241  NSQVKVDTVVSTCNGDRHNTNLESVESNKTISESVMVENANSESVNETLVESRTSETVQN 300

Query: 996  EKLDENL-------------VQCNNGEGK---GSGFCYGEKEKERFNRILNHYVGTHNFH 865
            E  D +L              +  NGE K   GSGFCYGE+EK+RFNRIL HYVG+HNFH
Sbjct: 301  ENTDLSLDLDSKNDSKVMAEERSVNGEEKLLKGSGFCYGEEEKKRFNRILKHYVGSHNFH 360

Query: 864  NFTTRTKAEDPSAKRYILSFEANVIVTVEGIDFVKCEVVGQSFMLHQIRKLIGLAVSVMR 685
            NFTTRTKAEDPSA+RYI+SF A+ +V VEGIDF+KCEVVGQSFMLHQIRK+IGLAV+V+R
Sbjct: 361  NFTTRTKAEDPSARRYIISFGADSVVNVEGIDFLKCEVVGQSFMLHQIRKMIGLAVAVVR 420

Query: 684  NCTPELLIDTALQQDVNINVPTAPEVGLYLDECFFTSYNQKWKDTHEEISMKDYAEEAED 505
            NC PE LI+TALQ+DVNINVPTAPEVGLYLDEC F SYN+KWKD+HEE+SMK Y EEAE+
Sbjct: 421  NCAPESLIETALQKDVNINVPTAPEVGLYLDECIFASYNKKWKDSHEELSMKAYEEEAEN 480

Query: 504  FKMKQIYSHIASTEHKEGAVALWLHSLNHRNYPDLRVVEANE 379
            FKMK I+SHIA TE KEG VALWLHSLN+RNYPDLR +  +E
Sbjct: 481  FKMKHIFSHIARTEQKEGVVALWLHSLNYRNYPDLRFLGNDE 522


>ref|XP_007010013.1| Pseudouridine synthase [Theobroma cacao] gi|508726926|gb|EOY18823.1|
            Pseudouridine synthase [Theobroma cacao]
          Length = 507

 Score =  625 bits (1611), Expect = e-176
 Identities = 326/470 (69%), Positives = 368/470 (78%), Gaps = 2/470 (0%)
 Frame = -3

Query: 1800 PPRVEPEPKKLKMXXXXXXXXXXXXXXXXXXXXXTQNPRYKRRKIAIFFAYCGVGYQGMQ 1621
            P   EP+PK+LKM                      +  RYKRRKIAIFFAYCGVGYQGMQ
Sbjct: 20   PTTQEPDPKRLKMSTTTTSDDEETASATNGT----KKQRYKRRKIAIFFAYCGVGYQGMQ 75

Query: 1620 KNPGAKTIEGDLEEALYLSGAVPETDRGKPKRFDFARSARTDKGVSAVGQVVSGRFYIDP 1441
            KNPGAKTIEGDLEEAL+ SGAVPE DRG PKR+D+ARSARTDKGVSAVGQVVSGRFYIDP
Sbjct: 76   KNPGAKTIEGDLEEALFHSGAVPEQDRGNPKRYDWARSARTDKGVSAVGQVVSGRFYIDP 135

Query: 1440 PGLIDRLNSNLPHQIRIFGFKRATASFNAKKFCDRRRYVYLIPVFALDPNSHPDRESVLA 1261
            PGL++RLN  LP QIRIFG+KR TASFN+KKFCDRRRYVYLIPVFALDP+ H DRESVLA
Sbjct: 136  PGLVERLNRILPAQIRIFGYKRVTASFNSKKFCDRRRYVYLIPVFALDPSCHRDRESVLA 195

Query: 1260 SLGSENQLVKCLECSERGRKVFGVMGRRNSE--SNIGENGVSIVSQIEGETESGFSLENN 1087
            SLGS N+LVKCLECSERGRKV GVMG+R+ E  S I  + VS         ESG  ++ +
Sbjct: 196  SLGSGNELVKCLECSERGRKVAGVMGKRSFEAKSTIVHSDVS-----SNNGESGNVIKEH 250

Query: 1086 VVAVSNSETTLDSTVSQSEIVVDPRVSLEEEKLDENLVQCNNGEGKGSGFCYGEKEKERF 907
             +     E T DS+V Q+E     +V++E+  L+E              FCYGE+EK  F
Sbjct: 251  NLTSELEEVT-DSSV-QNEFTEVDKVNVEKIPLEERR------------FCYGEEEKGLF 296

Query: 906  NRILNHYVGTHNFHNFTTRTKAEDPSAKRYILSFEANVIVTVEGIDFVKCEVVGQSFMLH 727
            NRIL HYVG+HNFHNFTTRTKAEDPSA+RYI+SF AN +V VEGIDFVKCEVVGQSFMLH
Sbjct: 297  NRILKHYVGSHNFHNFTTRTKAEDPSARRYIVSFHANTVVNVEGIDFVKCEVVGQSFMLH 356

Query: 726  QIRKLIGLAVSVMRNCTPELLIDTALQQDVNINVPTAPEVGLYLDECFFTSYNQKWKDTH 547
            QIRK+IG+AV+VMRNC PE LI+TAL++DV+INVPTAPEVGLYLDEC F SYNQKWKD+H
Sbjct: 357  QIRKMIGMAVAVMRNCAPESLIETALRKDVSINVPTAPEVGLYLDECLFASYNQKWKDSH 416

Query: 546  EEISMKDYAEEAEDFKMKQIYSHIASTEHKEGAVALWLHSLNHRNYPDLR 397
            EE+SMK Y EEAE+FKMK IYSHIASTE +EG VALWLHSLNHRNYPDLR
Sbjct: 417  EELSMKAYEEEAEEFKMKFIYSHIASTEREEGVVALWLHSLNHRNYPDLR 466


>ref|XP_004292926.1| PREDICTED: tRNA pseudouridine synthase A, mitochondrial-like
            [Fragaria vesca subsp. vesca]
          Length = 591

 Score =  624 bits (1609), Expect = e-176
 Identities = 323/489 (66%), Positives = 367/489 (75%), Gaps = 3/489 (0%)
 Frame = -3

Query: 1800 PPRVEPEPKKLKMXXXXXXXXXXXXXXXXXXXXXTQNPRYKRRKIAIFFAYCGVGYQGMQ 1621
            PP+ +P+PKKLKM                      Q  R KRRK+AIFFAYCGVGYQGMQ
Sbjct: 17   PPQQQPDPKKLKMSTTTTDDEQTAATT--------QKQRLKRRKVAIFFAYCGVGYQGMQ 68

Query: 1620 KNPGAKTIEGDLEEALYLSGAVPETDRGKPKRFDFARSARTDKGVSAVGQVVSGRFYIDP 1441
            KNPGAKTIEGDLEEALYLSGAVPE DR  PKR+D+ARSARTDKGVSAVGQVVSGRFY+DP
Sbjct: 69   KNPGAKTIEGDLEEALYLSGAVPEQDRSNPKRYDWARSARTDKGVSAVGQVVSGRFYVDP 128

Query: 1440 PGLIDRLNSNLPHQIRIFGFKRATASFNAKKFCDRRRYVYLIPVFALDPNSHPDRESVLA 1261
            PG +DRLNS+L  QIRIFG+KR TASFNAKKFCDRRRYVYLIPVFALDP++H DRESV A
Sbjct: 129  PGFVDRLNSHLSPQIRIFGYKRVTASFNAKKFCDRRRYVYLIPVFALDPSAHRDRESVKA 188

Query: 1260 SLGSENQLVKCLECSERGRKVFGVMGRRNSESNIGENGVSIVSQIEGETESGFSLENNVV 1081
            SLGS+ + VKCLECS+RGRKV G+MG+R  +   G N  +  S  E  T     ++N++ 
Sbjct: 189  SLGSDEEFVKCLECSDRGRKVGGLMGKRTYQLR-GGNSYNSESVTEISTNDDMKIDNDIE 247

Query: 1080 AVSNSETTLDSTVSQSEIVVDPRVSLEEEKLDENLVQCNNGEGK---GSGFCYGEKEKER 910
               N             +V +  ++  EE         N GE K   GSGFCYGEKEKER
Sbjct: 248  GEDNV------------VVGNADMNSAEE--------VNGGEKKAVEGSGFCYGEKEKER 287

Query: 909  FNRILNHYVGTHNFHNFTTRTKAEDPSAKRYILSFEANVIVTVEGIDFVKCEVVGQSFML 730
            FNRIL+ Y GTHNFHNFTTRTKAEDP+A RYI+SF AN  VTVEGI+FVKCEVVGQSFML
Sbjct: 288  FNRILSCYQGTHNFHNFTTRTKAEDPAAIRYIISFSANATVTVEGIEFVKCEVVGQSFML 347

Query: 729  HQIRKLIGLAVSVMRNCTPELLIDTALQQDVNINVPTAPEVGLYLDECFFTSYNQKWKDT 550
            HQIRKLIGLAV++MRNC PE L++ ALQ+DVN+NVPTAPEVGLYLDECFF+SYNQKW DT
Sbjct: 348  HQIRKLIGLAVAIMRNCAPESLLERALQKDVNVNVPTAPEVGLYLDECFFSSYNQKWGDT 407

Query: 549  HEEISMKDYAEEAEDFKMKQIYSHIASTEHKEGAVALWLHSLNHRNYPDLRVVEANEVHS 370
            HEE+SMK Y  EAE FKMK IY+HI +TEHKEG V LWLHSLNHRNYPDL   E N   S
Sbjct: 408  HEEVSMKGYEAEAEAFKMKHIYTHIGATEHKEGVVGLWLHSLNHRNYPDLG-AENNGDTS 466

Query: 369  NEENAQFDT 343
            N + A+  +
Sbjct: 467  NGKTAEISS 475


>ref|XP_004507720.1| PREDICTED: tRNA pseudouridine synthase A, mitochondrial-like isoform
            X2 [Cicer arietinum]
          Length = 475

 Score =  623 bits (1607), Expect = e-176
 Identities = 317/459 (69%), Positives = 369/459 (80%), Gaps = 8/459 (1%)
 Frame = -3

Query: 1686 RYKRRKIAIFFAYCGVGYQGMQKNPGAKTIEGDLEEALYLSGAVPETDRGKPKRFDFARS 1507
            RYKRRK+AI FAYCGVGYQGMQKNPGAKTIEG++EEALY+SGAVPE DRG  KR+D+ARS
Sbjct: 20   RYKRRKVAILFAYCGVGYQGMQKNPGAKTIEGEIEEALYVSGAVPEQDRGMSKRYDWARS 79

Query: 1506 ARTDKGVSAVGQVVSGRFYIDPPGLIDRLNSNLPHQIRIFGFKRATASFNAKKFCDRRRY 1327
            ARTDKGVSAVGQVVSGRFYIDPPG +DRLNSNLP QIRIFG+KR TASF+AKKFCDRRRY
Sbjct: 80   ARTDKGVSAVGQVVSGRFYIDPPGFVDRLNSNLPSQIRIFGYKRVTASFSAKKFCDRRRY 139

Query: 1326 VYLIPVFALDPNSHPDRESVLASLGSENQLVKCLECSERGRKVFGVMGRRNSESNIGENG 1147
            VYLIPVFALDP  H DRE+VLASLGSEN+LVKCLECSERGRKV G++G  NS+ N+    
Sbjct: 140  VYLIPVFALDPCCHRDRETVLASLGSENELVKCLECSERGRKVEGLVG--NSKRNLELEA 197

Query: 1146 VSIVSQIEGETESGF--SLENNVVAVS----NSETTLDSTVSQSEIVVDPRVSLEEEK-- 991
            + + +  +G+       S+ +N   VS    NS+T+ ++ VS  + V       E     
Sbjct: 198  MDVETTDKGDDNRSNKESINDNEGKVSVEDVNSKTSFETVVSGQDEVSPLNGGSENNSAV 257

Query: 990  LDENLVQCNNGEGKGSGFCYGEKEKERFNRILNHYVGTHNFHNFTTRTKAEDPSAKRYIL 811
            L+E  V   +   K S FCYGEKE+ERFN+IL  YVGTHNFHNFTTR K EDPSAKR+I+
Sbjct: 258  LEEEKVNGEDTPAKRSEFCYGEKERERFNKILKSYVGTHNFHNFTTRIKPEDPSAKRFII 317

Query: 810  SFEANVIVTVEGIDFVKCEVVGQSFMLHQIRKLIGLAVSVMRNCTPELLIDTALQQDVNI 631
            SF+A+  V +EG++FVKCE+VGQSFMLHQIRK++GLAV++MRNC PE LI+ ALQ DV+I
Sbjct: 318  SFDASNTVVIEGMEFVKCEIVGQSFMLHQIRKMMGLAVAIMRNCAPESLIEKALQTDVSI 377

Query: 630  NVPTAPEVGLYLDECFFTSYNQKWKDTHEEISMKDYAEEAEDFKMKQIYSHIASTEHKEG 451
             VPTAPEVGLYLDECFFTSYNQKWKDTHEE+SMK Y +EAEDFKMK IYSHIASTE KEG
Sbjct: 378  TVPTAPEVGLYLDECFFTSYNQKWKDTHEEVSMKAYEKEAEDFKMKFIYSHIASTEQKEG 437

Query: 450  AVALWLHSLNHRNYPDLRVVEANEVHSNEENAQFDTVAE 334
             V LWLHSLNHRNY DLRVVE   V +NE+ ++ + VAE
Sbjct: 438  TVGLWLHSLNHRNYSDLRVVEEEGV-ANEKKSEIEVVAE 475


>ref|XP_002510619.1| pseudouridylate synthase, putative [Ricinus communis]
            gi|223551320|gb|EEF52806.1| pseudouridylate synthase,
            putative [Ricinus communis]
          Length = 584

 Score =  623 bits (1607), Expect = e-176
 Identities = 333/534 (62%), Positives = 385/534 (72%), Gaps = 52/534 (9%)
 Frame = -3

Query: 1809 STSPPRVEPEPKKLKMXXXXXXXXXXXXXXXXXXXXXTQNPRYKRRKIAIFFAYCGVGYQ 1630
            ++ PP+ EPE K+ +M                      +  RYKRRK+AIFFAYCGVGYQ
Sbjct: 9    TSPPPQEEPERKRPRMSTTTSDEEEIATTAPGDEAATVKKQRYKRRKMAIFFAYCGVGYQ 68

Query: 1629 GMQKNPGAKTIEGDLEEALYLSGAVPETDRGKPKRFDFARSARTDKGVSAVGQVVSGRFY 1450
            GMQKNPGAKTIEGDLEEAL+ SGAVPE DRG PKR+D+ARSARTDKGVSAVGQV+SGRFY
Sbjct: 69   GMQKNPGAKTIEGDLEEALFHSGAVPEQDRGCPKRYDWARSARTDKGVSAVGQVISGRFY 128

Query: 1449 IDPPGLIDRLNSNLPHQIRIFGFKRATASFNAKKFCDRRRYVYLIPVFALDPNSHPDRES 1270
            +DPPGL+DRLNS LP QIRIFG+KR TASFNAKKFCDRRRYVYLIPVFALDP+SH DRES
Sbjct: 129  VDPPGLVDRLNSILPSQIRIFGYKRVTASFNAKKFCDRRRYVYLIPVFALDPSSHRDRES 188

Query: 1269 VLASLGSENQLVKCLECSERGRKVFGVMGRRNSES-------NIGENGVSIVSQIEGETE 1111
            VLASLGS ++LVKCLECSERGRKV G +G+R+ ES       +I  NG   ++  E + +
Sbjct: 189  VLASLGSGDELVKCLECSERGRKVIGAVGKRSFESKSEAFQTDILLNGGCAIANCEIKED 248

Query: 1110 SGFSLEN--------------NVVAVSNSET----------------TLDSTVSQSEIVV 1021
               S++N              NV    +SET                 + S   Q E++V
Sbjct: 249  ISMSMDNAHGVRMHSEFVEQTNVSHNEDSETESAMPRTDILSNSEDGNVKSDSKQEEVMV 308

Query: 1020 DPRVSLEEEKLDENLVQCN---------NGEG---KGSGFCYGEKEKERFNRILNHYVGT 877
                +    K  E + + +         NGE    KGS FCYGE+EKE+FNRIL +YVG+
Sbjct: 309  SEDAADGGNKESETMEKDSKASVGEERVNGEEHVMKGSEFCYGEEEKEKFNRILKYYVGS 368

Query: 876  HNFHNFTTRTKAEDPSAKRYILSFEANVIVTVEGIDFVKCEVVGQSFMLHQIRKLIGLAV 697
            HNFHNFTTRTKAEDPSA+RYI+SF+A   VTVEGI+FVKCEV+GQSFMLHQIRK+IGLAV
Sbjct: 369  HNFHNFTTRTKAEDPSAQRYIISFDARTTVTVEGIEFVKCEVIGQSFMLHQIRKMIGLAV 428

Query: 696  SVMRNCTPELLIDTALQQDVNINVPTAPEVGLYLDECFFTSYNQKWKDTHEEISMKDYAE 517
            ++MRNC PE LI TALQ+DV INVPTAPEVGLYLDECFFTSYNQKWKD HEE+ MKDY E
Sbjct: 429  AIMRNCAPESLISTALQKDVKINVPTAPEVGLYLDECFFTSYNQKWKD-HEELCMKDYEE 487

Query: 516  EAEDFKMKQIYSHIASTEHKEGAVALWLHSLNHRNYPDLR---VVEANEVHSNE 364
             AEDFKMK IYSHIASTE KEG V LWLHSLN+RNYPDLR    ++AN   S E
Sbjct: 488  VAEDFKMKYIYSHIASTEQKEGVVGLWLHSLNYRNYPDLRFCYTLDANNEKSTE 541


>ref|XP_007154901.1| hypothetical protein PHAVU_003G157400g [Phaseolus vulgaris]
            gi|561028255|gb|ESW26895.1| hypothetical protein
            PHAVU_003G157400g [Phaseolus vulgaris]
          Length = 556

 Score =  622 bits (1605), Expect = e-175
 Identities = 321/468 (68%), Positives = 370/468 (79%), Gaps = 27/468 (5%)
 Frame = -3

Query: 1686 RYKRRKIAIFFAYCGVGYQGMQKNPGAKTIEGDLEEALYLSGAVPETDRGKPKRFDFARS 1507
            RYKRRKIAIFFAYCGVGYQGMQKNPGAKTIEGDLEEALY+SGAVPE DRG PKR+D+ARS
Sbjct: 19   RYKRRKIAIFFAYCGVGYQGMQKNPGAKTIEGDLEEALYVSGAVPEHDRGIPKRYDWARS 78

Query: 1506 ARTDKGVSAVGQVVSGRFYIDPPGLIDRLNSNLPHQIRIFGFKRATASFNAKKFCDRRRY 1327
            ARTDKGVSAVGQVVSGRFYIDPPGL+DRLNSNL  QIRIFG+KR T SFNAKKFCDRRRY
Sbjct: 79   ARTDKGVSAVGQVVSGRFYIDPPGLVDRLNSNLHSQIRIFGYKRVTGSFNAKKFCDRRRY 138

Query: 1326 VYLIPVFALDPNSHPDRESVLASLGSENQLVKCLECSERGRKVFGVMGRR---------N 1174
            VYLIPVFALDP  H DRE+V+ASLGS N+LVKCLECSERGRKV G++G R         +
Sbjct: 139  VYLIPVFALDPCCHRDRETVMASLGSTNELVKCLECSERGRKVVGLVGNRKHNLELEAMD 198

Query: 1173 SESNIGEN-GVSIVSQIEGETESGFSL--ENNVVAVSNSE---------TTLDSTVSQSE 1030
             E+ I  N  V + S + G+ E+  S   +N++   S  +         T L + + +  
Sbjct: 199  VEAGISSNTDVVLDSVVTGDVEASLSKGDDNHLNGESGIDNKGKVLVDGTNLKTGIEKGI 258

Query: 1029 IVVDPRVSLEEEKLDENLV---QCNNGEGK---GSGFCYGEKEKERFNRILNHYVGTHNF 868
             V D  + L  E ++ + +   +  NGE K   GS FCYGEKE+ERFN+ILN +VGTHNF
Sbjct: 259  PVQDEVMPLNGESVNNSDIIEEEKMNGEDKSTSGSMFCYGEKERERFNKILNCFVGTHNF 318

Query: 867  HNFTTRTKAEDPSAKRYILSFEANVIVTVEGIDFVKCEVVGQSFMLHQIRKLIGLAVSVM 688
            HNFTTRTKAEDP+A+RYI+SF AN    VEGI+FVKCEVVGQSFMLHQIRK++GLAV++M
Sbjct: 319  HNFTTRTKAEDPAARRYIISFNANTAFAVEGIEFVKCEVVGQSFMLHQIRKMMGLAVAIM 378

Query: 687  RNCTPELLIDTALQQDVNINVPTAPEVGLYLDECFFTSYNQKWKDTHEEISMKDYAEEAE 508
            RNC PE LI+ ALQQDVNINVPTAPEVGLYLDECFF+SYNQKWKD+HEE+SMK Y +EAE
Sbjct: 379  RNCAPESLINKALQQDVNINVPTAPEVGLYLDECFFSSYNQKWKDSHEELSMKAYEKEAE 438

Query: 507  DFKMKQIYSHIASTEHKEGAVALWLHSLNHRNYPDLRVVEANEVHSNE 364
            +FKMK IYSHI+ TE KEG VALWLHSLNHRNYPDLRVV    +  N+
Sbjct: 439  EFKMKYIYSHISFTEQKEGTVALWLHSLNHRNYPDLRVVNEEAITDNK 486


>ref|XP_003610360.1| tRNA pseudouridine synthase [Medicago truncatula]
            gi|355511415|gb|AES92557.1| tRNA pseudouridine synthase
            [Medicago truncatula] gi|388510220|gb|AFK43176.1| unknown
            [Medicago truncatula]
          Length = 530

 Score =  622 bits (1604), Expect = e-175
 Identities = 333/539 (61%), Positives = 382/539 (70%), Gaps = 35/539 (6%)
 Frame = -3

Query: 1845 MENSSKSN*TMDSTSPPRV---EPEPKKLKMXXXXXXXXXXXXXXXXXXXXXTQNPRYKR 1675
            MENS K+     S + P     EP  KK+KM                         RYKR
Sbjct: 1    MENSDKTPSISSSPALPSAVAEEPATKKVKMSTTTSDDEGCTTAEG-------SKVRYKR 53

Query: 1674 RKIAIFFAYCGVGYQGMQKNPGAKTIEGDLEEALYLSGAVPETDRGKPKRFDFARSARTD 1495
            RK+AIFFAYCGVGYQGMQKNPGAKTIEG+LEEALY+SGAVPE DRG  KR+D+ARSARTD
Sbjct: 54   RKVAIFFAYCGVGYQGMQKNPGAKTIEGELEEALYVSGAVPEQDRGLSKRYDWARSARTD 113

Query: 1494 KGVSAVGQVVSGRFYIDPPGLIDRLNSNLPHQIRIFGFKRATASFNAKKFCDRRRYVYLI 1315
            KGVSAVGQVVSGRFYIDPPG +DRLNSNLP QIRIFGFKR TASF+AKKFCDRRRYVYLI
Sbjct: 114  KGVSAVGQVVSGRFYIDPPGFVDRLNSNLPSQIRIFGFKRVTASFSAKKFCDRRRYVYLI 173

Query: 1314 PVFALDPNSHPDRESVLASLGSENQLVKCLECSERGRKVFGVMGRRNSESNIG------E 1153
            PVFALDP  H DRE+VLASLGSEN+LVKCL CSERGRKV GV+G  NS+ N+       E
Sbjct: 174  PVFALDPCCHRDRETVLASLGSENELVKCLPCSERGRKVEGVVG--NSKRNLELEAVDVE 231

Query: 1152 NGVS---------IVSQIEGETESGF-------SLENNVVAVSNSETTLDSTVSQSEIVV 1021
            NG S         +   +E     G        S+ +N   VS  E    + VS  + V 
Sbjct: 232  NGSSNKNDVVDSGVTKDVEVSLSKGDDNHLNKESINDNEGKVSVEEVNSKTVVSDQDEVA 291

Query: 1020 DPRVSLEEEK--LDENLVQCNNGEGKGSGFCYGEKEKERFNRILNHYVGTHNFHNFTTRT 847
                  E     L+E  V   +    GSGFCYGEKE+ERFN IL  YVGTHNFHNFTTR 
Sbjct: 292  PINGGSENNLGILEEEKVNREDTAANGSGFCYGEKERERFNNILKCYVGTHNFHNFTTRI 351

Query: 846  KAEDPSAKRYILSFEANVIVTVEGIDFVKCEVVGQSFMLHQIRKLIGLAVSVMRNCTPEL 667
            K EDPSAKR+I+SF+A+  V VEG++FVKCE+VGQSFMLHQIRK++GLAV++MRNC PE 
Sbjct: 352  KPEDPSAKRFIISFDASTTVVVEGMEFVKCEIVGQSFMLHQIRKMMGLAVAIMRNCAPES 411

Query: 666  LIDTALQQDVNINVPTAPEVGLYLDECFFTSYNQKWKDTHEEISMKDYAEEAEDFKMKQI 487
            LI+ ALQ+DV+I VPTAPEVGLYLDECFFTSYNQKWKDTHEE+SMK Y +EAEDFKM+ I
Sbjct: 412  LIEKALQKDVSITVPTAPEVGLYLDECFFTSYNQKWKDTHEEVSMKAYEKEAEDFKMQYI 471

Query: 486  YSHIASTEHKEGAVALWLHSLNHRNYPDLRVVEAN--------EVHSNEENAQFDTVAE 334
            Y HIASTE+KEG V LWLHSLNHRNYPDLR+++          EV  N++  + + V E
Sbjct: 472  YPHIASTEYKEGTVGLWLHSLNHRNYPDLRILDGEGVTNDKKVEVDMNDKKTEIEVVTE 530


>ref|XP_003610356.1| tRNA pseudouridine synthase [Medicago truncatula]
            gi|355511411|gb|AES92553.1| tRNA pseudouridine synthase
            [Medicago truncatula]
          Length = 530

 Score =  622 bits (1604), Expect = e-175
 Identities = 333/539 (61%), Positives = 382/539 (70%), Gaps = 35/539 (6%)
 Frame = -3

Query: 1845 MENSSKSN*TMDSTSPPRV---EPEPKKLKMXXXXXXXXXXXXXXXXXXXXXTQNPRYKR 1675
            MENS K+     S + P     EP  KK+KM                         RYKR
Sbjct: 1    MENSDKTPSISSSPALPSAVAEEPATKKVKMSTTTSDDEGCTTAEG-------SKVRYKR 53

Query: 1674 RKIAIFFAYCGVGYQGMQKNPGAKTIEGDLEEALYLSGAVPETDRGKPKRFDFARSARTD 1495
            RK+AIFFAYCGVGYQGMQKNPGAKTIEG+LEEALY+SGAVPE DRG  KR+D+ARSARTD
Sbjct: 54   RKVAIFFAYCGVGYQGMQKNPGAKTIEGELEEALYVSGAVPEQDRGLSKRYDWARSARTD 113

Query: 1494 KGVSAVGQVVSGRFYIDPPGLIDRLNSNLPHQIRIFGFKRATASFNAKKFCDRRRYVYLI 1315
            KGVSAVGQVVSGRFYIDPPG +DRLNSNLP QIRIFGFKR TASF+AKKFCDRRRYVYLI
Sbjct: 114  KGVSAVGQVVSGRFYIDPPGFVDRLNSNLPSQIRIFGFKRVTASFSAKKFCDRRRYVYLI 173

Query: 1314 PVFALDPNSHPDRESVLASLGSENQLVKCLECSERGRKVFGVMGRRNSESNIG------E 1153
            PVFALDP  H DRE+VLASLGSEN+LVKCL CSERGRKV GV+G  NS+ N+       E
Sbjct: 174  PVFALDPCCHRDRETVLASLGSENELVKCLPCSERGRKVEGVVG--NSKRNLELEAVDVE 231

Query: 1152 NGVS---------IVSQIEGETESGF-------SLENNVVAVSNSETTLDSTVSQSEIVV 1021
            NG S         +   +E     G        S+ +N   VS  E    + VS  + V 
Sbjct: 232  NGSSNKNDVVDSGVTKDVEVSLSKGDDNHLNKESINDNEGKVSVEEVNSKTVVSDEDEVA 291

Query: 1020 DPRVSLEEEK--LDENLVQCNNGEGKGSGFCYGEKEKERFNRILNHYVGTHNFHNFTTRT 847
                  E     L+E  V   +    GSGFCYGEKE+ERFN IL  YVGTHNFHNFTTR 
Sbjct: 292  PINGGSENNLGILEEEKVNREDTAANGSGFCYGEKERERFNNILKCYVGTHNFHNFTTRI 351

Query: 846  KAEDPSAKRYILSFEANVIVTVEGIDFVKCEVVGQSFMLHQIRKLIGLAVSVMRNCTPEL 667
            K EDPSAKR+I+SF+A+  V VEG++FVKCE+VGQSFMLHQIRK++GLAV++MRNC PE 
Sbjct: 352  KPEDPSAKRFIISFDASTTVVVEGMEFVKCEIVGQSFMLHQIRKMMGLAVAIMRNCAPES 411

Query: 666  LIDTALQQDVNINVPTAPEVGLYLDECFFTSYNQKWKDTHEEISMKDYAEEAEDFKMKQI 487
            LI+ ALQ+DV+I VPTAPEVGLYLDECFFTSYNQKWKDTHEE+SMK Y +EAEDFKM+ I
Sbjct: 412  LIEKALQKDVSITVPTAPEVGLYLDECFFTSYNQKWKDTHEEVSMKAYEKEAEDFKMQYI 471

Query: 486  YSHIASTEHKEGAVALWLHSLNHRNYPDLRVVEAN--------EVHSNEENAQFDTVAE 334
            Y HIASTE+KEG V LWLHSLNHRNYPDLR+++          EV  N++  + + V E
Sbjct: 472  YPHIASTEYKEGTVGLWLHSLNHRNYPDLRILDGEGVTNDKKVEVDMNDKKTEIEVVTE 530


>gb|ACJ85562.1| unknown [Medicago truncatula] gi|388491044|gb|AFK33588.1| unknown
            [Medicago truncatula]
          Length = 530

 Score =  619 bits (1597), Expect = e-174
 Identities = 332/539 (61%), Positives = 381/539 (70%), Gaps = 35/539 (6%)
 Frame = -3

Query: 1845 MENSSKSN*TMDSTSPPRV---EPEPKKLKMXXXXXXXXXXXXXXXXXXXXXTQNPRYKR 1675
            MENS K+     S + P     EP  KK+KM                         RYKR
Sbjct: 1    MENSDKTPSISSSPALPSAVAEEPATKKVKMSTTTSDDEGCTTAEG-------SKVRYKR 53

Query: 1674 RKIAIFFAYCGVGYQGMQKNPGAKTIEGDLEEALYLSGAVPETDRGKPKRFDFARSARTD 1495
            RK+AIFFAYCGVGYQGMQKNPGAKTIEG+LEEALY+SGAVPE DRG  KR+D+ARSARTD
Sbjct: 54   RKVAIFFAYCGVGYQGMQKNPGAKTIEGELEEALYVSGAVPEQDRGLSKRYDWARSARTD 113

Query: 1494 KGVSAVGQVVSGRFYIDPPGLIDRLNSNLPHQIRIFGFKRATASFNAKKFCDRRRYVYLI 1315
            KGVSAVGQVVSGRFYIDPPG +DRLNSNLP QIRIFGFKR TASF+AKKFCDRRRYVYLI
Sbjct: 114  KGVSAVGQVVSGRFYIDPPGFVDRLNSNLPSQIRIFGFKRVTASFSAKKFCDRRRYVYLI 173

Query: 1314 PVFALDPNSHPDRESVLASLGSENQLVKCLECSERGRKVFGVMGRRNSESNIG------E 1153
            PVFALDP  H DRE+VLASLGSEN+LVKCL CSERGRKV GV+G  NS+ N+       E
Sbjct: 174  PVFALDPCCHRDRETVLASLGSENELVKCLPCSERGRKVEGVVG--NSKRNLELEAVDVE 231

Query: 1152 NGVS---------IVSQIEGETESGF-------SLENNVVAVSNSETTLDSTVSQSEIVV 1021
            NG S         +   +E     G        S+ +N   VS  E    + VS  + V 
Sbjct: 232  NGSSNKNDVVDSGVTKDVEVSLSKGDDNHLNKESINDNEGKVSVEEVNSKTVVSDQDEVA 291

Query: 1020 DPRVSLEEEK--LDENLVQCNNGEGKGSGFCYGEKEKERFNRILNHYVGTHNFHNFTTRT 847
                  E     L+E  V   +    GSGFCYGEKE+ERFN IL  YVGTHNFHNFTTR 
Sbjct: 292  PINGGSENNLGILEEEKVNREDTAANGSGFCYGEKERERFNNILKCYVGTHNFHNFTTRI 351

Query: 846  KAEDPSAKRYILSFEANVIVTVEGIDFVKCEVVGQSFMLHQIRKLIGLAVSVMRNCTPEL 667
            K EDPSAKR+I+SF+A+  V VEG++FVKCE+VGQSFMLHQIRK++GLAV++MRNC PE 
Sbjct: 352  KPEDPSAKRFIISFDASTTVVVEGMEFVKCEIVGQSFMLHQIRKMMGLAVAIMRNCAPES 411

Query: 666  LIDTALQQDVNINVPTAPEVGLYLDECFFTSYNQKWKDTHEEISMKDYAEEAEDFKMKQI 487
            LI+ ALQ+DV+I VPTAPEVGLYLDECFFTSYNQKWKDTHEE+SMK Y +EAEDFKM+ I
Sbjct: 412  LIEKALQKDVSITVPTAPEVGLYLDECFFTSYNQKWKDTHEEVSMKAYEKEAEDFKMQYI 471

Query: 486  YSHIASTEHKEGAVALWLHSLNHRNYPDLRVVEAN--------EVHSNEENAQFDTVAE 334
            Y HIASTE+KEG V LWLHSLNHRNYPDL +++          EV  N++  + + V E
Sbjct: 472  YPHIASTEYKEGTVGLWLHSLNHRNYPDLGILDGEGVTNDKKVEVDMNDKKTEIEVVTE 530


>ref|XP_006473737.1| PREDICTED: tRNA pseudouridine synthase A, mitochondrial-like [Citrus
            sinensis]
          Length = 526

 Score =  618 bits (1594), Expect = e-174
 Identities = 329/522 (63%), Positives = 391/522 (74%), Gaps = 33/522 (6%)
 Frame = -3

Query: 1845 MENSSKSN*TMDSTS-PPRVEPEPKKLKMXXXXXXXXXXXXXXXXXXXXXTQNPRY-KRR 1672
            MEN+  +   + S S  PR EP+PK+LKM                     T   +  KRR
Sbjct: 1    MENAETNTEKLPSPSLSPRQEPDPKRLKMSATTTSDDERDLIPAAAGADSTTKRQLCKRR 60

Query: 1671 KIAIFFAYCGVGYQGMQKNPGAKTIEGDLEEALYLSGAVPETDRGKPKRFDFARSARTDK 1492
            KIAIFFAYCGVGYQGMQKNPGAKTIEGDLEEAL+ SGAV E DRG P+R+D+ARSARTDK
Sbjct: 61   KIAIFFAYCGVGYQGMQKNPGAKTIEGDLEEALFHSGAVSERDRGNPRRYDWARSARTDK 120

Query: 1491 GVSAVGQVVSGRFYIDPPGLIDRLNSNLPHQIRIFGFKRATASFNAKKFCDRRRYVYLIP 1312
            GVSAVGQVVSGRF IDPPGL++RLN NLP QIRIFG+KR TASFNAKKFCD+RRYVYL+P
Sbjct: 121  GVSAVGQVVSGRFCIDPPGLVERLNYNLPTQIRIFGYKRVTASFNAKKFCDQRRYVYLLP 180

Query: 1311 VFALDPNSHPDRESVLASLGSENQLVKCLECSERGRKVFGVMGRRNSESNIGEN--GVSI 1138
            VFALD +SH DRESV+ASLGS N+LVKCLECSERGRKV GVMG+R  +  +  N    S+
Sbjct: 181  VFALDSSSHRDRESVMASLGSGNELVKCLECSERGRKVIGVMGKRTYQLGLPSNDENASL 240

Query: 1137 VSQIEGETE----SGFSLENNVVAVSNSETTLDSTV-------SQSEIVVDPRVS--LEE 997
             SQ++ +T     +G     N+ +V +++T  +S +       S +E +V+ R S  ++ 
Sbjct: 241  NSQVKVDTVVSTCNGDRHNTNLESVESNKTISESAMVENANSESVNETLVESRTSETVQN 300

Query: 996  EKLDENL-------------VQCNNGEGK---GSGFCYGEKEKERFNRILNHYVGTHNFH 865
            E  D +L              +  NGE K   GSGFCYGE+EK+RFNRIL HYVG+HNFH
Sbjct: 301  ENTDLSLDLDSKNDSKVMAEERSVNGEEKLLKGSGFCYGEEEKKRFNRILKHYVGSHNFH 360

Query: 864  NFTTRTKAEDPSAKRYILSFEANVIVTVEGIDFVKCEVVGQSFMLHQIRKLIGLAVSVMR 685
            NFTTRTKAEDPSA+RYI+SF A+ +V VEGIDF+KCEVVGQSFMLHQIRK+IGLAV+V+R
Sbjct: 361  NFTTRTKAEDPSARRYIISFGADSVVNVEGIDFLKCEVVGQSFMLHQIRKMIGLAVAVVR 420

Query: 684  NCTPELLIDTALQQDVNINVPTAPEVGLYLDECFFTSYNQKWKDTHEEISMKDYAEEAED 505
            NC P+ LI+TALQ+DVNINVPTAPEVGLYLDEC F SYN+KWKD+HEE+SMK Y EEAE+
Sbjct: 421  NCAPQSLIETALQKDVNINVPTAPEVGLYLDECIFASYNKKWKDSHEELSMKAYEEEAEN 480

Query: 504  FKMKQIYSHIASTEHKEGAVALWLHSLNHRNYPDLRVVEANE 379
            FKMK I+SHI  TE KEG VALWLHSLN+RNYPDL  +  +E
Sbjct: 481  FKMKHIFSHITRTEQKEGVVALWLHSLNYRNYPDLHFLGNDE 522


>emb|CBI18897.3| unnamed protein product [Vitis vinifera]
          Length = 419

 Score =  615 bits (1586), Expect = e-173
 Identities = 308/435 (70%), Positives = 357/435 (82%), Gaps = 4/435 (0%)
 Frame = -3

Query: 1626 MQKNPGAKTIEGDLEEALYLSGAVPETDRGKPKRFDFARSARTDKGVSAVGQVVSGRFYI 1447
            MQKNPGAKTIEGDLEEAL+ SGAVPE DRG PKRFD+ARSARTDKGVSAVGQVVSGRFYI
Sbjct: 1    MQKNPGAKTIEGDLEEALFFSGAVPEQDRGHPKRFDWARSARTDKGVSAVGQVVSGRFYI 60

Query: 1446 DPPGLIDRLNSNLPHQIRIFGFKRATASFNAKKFCDRRRYVYLIPVFALDPNSHPDRESV 1267
            DPPGL++RLNSNLP QIRIFGFKR TASFNAKKFCDRRRYVYLIPVFALDP+SHPDRESV
Sbjct: 61   DPPGLVERLNSNLPPQIRIFGFKRVTASFNAKKFCDRRRYVYLIPVFALDPSSHPDRESV 120

Query: 1266 LASLGSENQLVKCLECSERGRKVFGVMGRRNSES-NIGENGVSIVSQIEGETESGFSLEN 1090
            LAS+GSEN+LVKCLECSERGRKV G+MG+R  ES NI + G+                 N
Sbjct: 121  LASVGSENELVKCLECSERGRKVVGIMGKRKGESKNIVQLGIP---------------SN 165

Query: 1089 NVVAVSNSETTLDSTVSQSEIVVDPRVSLEEEKLDENLVQCNNGEGK---GSGFCYGEKE 919
            +  A+ NSE   +   + +   +D   S+ E   +E     + GE K   GSGFCYG+KE
Sbjct: 166  DEAAIVNSEVQEEIKATSNNNNIDANNSISETIKEEAAKLSSEGENKLEKGSGFCYGDKE 225

Query: 918  KERFNRILNHYVGTHNFHNFTTRTKAEDPSAKRYILSFEANVIVTVEGIDFVKCEVVGQS 739
            +ERFNRIL HYVGTHNFHNFTTR KAEDPSA+R+I+SF+ N IVTVEGI+FVKCEVVGQS
Sbjct: 226  RERFNRILGHYVGTHNFHNFTTRIKAEDPSAQRFIVSFDGNTIVTVEGIEFVKCEVVGQS 285

Query: 738  FMLHQIRKLIGLAVSVMRNCTPELLIDTALQQDVNINVPTAPEVGLYLDECFFTSYNQKW 559
            FMLHQIRK+IGLAV++MRN  PE L++TAL +DVNINVPTAPEVGLYLDECFF+SYN+KW
Sbjct: 286  FMLHQIRKMIGLAVAIMRNVAPESLLETALLKDVNINVPTAPEVGLYLDECFFSSYNKKW 345

Query: 558  KDTHEEISMKDYAEEAEDFKMKQIYSHIASTEHKEGAVALWLHSLNHRNYPDLRVVEANE 379
            +D+HEE+SMK YAEEAE+FKMK +YSHIA+TEHKEG VALWLHSLNHRNYPDL + + N 
Sbjct: 346  RDSHEEVSMKAYAEEAEEFKMKHVYSHIAATEHKEGVVALWLHSLNHRNYPDLCIGD-NG 404

Query: 378  VHSNEENAQFDTVAE 334
              S+ +N + +T+A+
Sbjct: 405  AASDGKNGEEETMAD 419