BLASTX nr result
ID: Akebia27_contig00013839
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Akebia27_contig00013839
(720 letters)
Database: ./nr
38,876,450 sequences; 13,856,398,315 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_003616406.1| Splicing factor, arginine/serine-rich 13A [M... 64 5e-08
ref|XP_006403456.1| hypothetical protein EUTSA_v10010627mg [Eutr... 64 7e-08
ref|XP_006291521.1| hypothetical protein CARUB_v10017670mg, part... 64 7e-08
ref|XP_002876304.1| hypothetical protein ARALYDRAFT_485973 [Arab... 64 7e-08
emb|CAB75904.1| putative RNA binding protein [Arabidopsis thaliana] 63 9e-08
emb|CAC03602.1| SC35-like splicing factor SCL30, 30 kD [Arabidop... 63 9e-08
ref|NP_567021.1| SC35-like splicing factor 30 [Arabidopsis thali... 63 9e-08
gb|AGZ15399.1| unknown [Phaseolus vulgaris] 62 1e-07
gb|AGV54513.1| splicing factor arginine/serine-rich 13A [Phaseol... 62 1e-07
ref|NP_001067091.1| Os12g0572400 [Oryza sativa Japonica Group] g... 62 1e-07
ref|XP_003545260.1| PREDICTED: serine/arginine-rich splicing fac... 62 1e-07
ref|XP_003518382.1| PREDICTED: serine/arginine-rich splicing fac... 62 1e-07
gb|EEC69539.1| hypothetical protein OsI_38819 [Oryza sativa Indi... 62 1e-07
dbj|BAC78592.1| pre-mRNA splicing factor [Oryza sativa Japonica ... 62 1e-07
ref|XP_006647123.1| PREDICTED: serine/arginine-rich splicing fac... 62 3e-07
ref|XP_007141872.1| hypothetical protein PHAVU_008G232900g [Phas... 62 3e-07
gb|EMT23970.1| 35 kDa SR repressor protein [Aegilops tauschii] 62 3e-07
ref|NP_001046448.1| Os02g0252100 [Oryza sativa Japonica Group] g... 62 3e-07
dbj|BAJ91767.1| predicted protein [Hordeum vulgare subsp. vulgare] 62 3e-07
emb|CBI31687.3| unnamed protein product [Vitis vinifera] 62 3e-07
>ref|XP_003616406.1| Splicing factor, arginine/serine-rich 13A [Medicago truncatula]
gi|355517741|gb|AES99364.1| Splicing factor,
arginine/serine-rich 13A [Medicago truncatula]
Length = 286
Score = 63.9 bits (154), Expect = 5e-08
Identities = 26/29 (89%), Positives = 29/29 (100%)
Frame = +3
Query: 3 NCRPEDLRAPFERFGPVRDVYLPKDYYSG 89
+CRPE+LRAPFERFGPVRDVY+PKDYYSG
Sbjct: 57 DCRPEELRAPFERFGPVRDVYIPKDYYSG 85
>ref|XP_006403456.1| hypothetical protein EUTSA_v10010627mg [Eutrema salsugineum]
gi|557104575|gb|ESQ44909.1| hypothetical protein
EUTSA_v10010627mg [Eutrema salsugineum]
Length = 272
Score = 63.5 bits (153), Expect = 7e-08
Identities = 31/50 (62%), Positives = 36/50 (72%), Gaps = 3/50 (6%)
Frame = +3
Query: 3 NCRPEDLRAPFERFGPVRDVYLPKDYYSG---GFCWFEVKTSPRPAYDEG 143
+CRPE+LR PFERFGPVRDVY+P+DYYSG GF + E AYD G
Sbjct: 49 DCRPEELRVPFERFGPVRDVYIPRDYYSGEPRGFAFVEFV----DAYDAG 94
>ref|XP_006291521.1| hypothetical protein CARUB_v10017670mg, partial [Capsella rubella]
gi|482560228|gb|EOA24419.1| hypothetical protein
CARUB_v10017670mg, partial [Capsella rubella]
Length = 315
Score = 63.5 bits (153), Expect = 7e-08
Identities = 31/50 (62%), Positives = 36/50 (72%), Gaps = 3/50 (6%)
Frame = +3
Query: 3 NCRPEDLRAPFERFGPVRDVYLPKDYYSG---GFCWFEVKTSPRPAYDEG 143
+CRPE+LR PFERFGPVRDVY+P+DYYSG GF + E AYD G
Sbjct: 92 DCRPEELRVPFERFGPVRDVYIPRDYYSGEPRGFAFVEFV----DAYDAG 137
>ref|XP_002876304.1| hypothetical protein ARALYDRAFT_485973 [Arabidopsis lyrata subsp.
lyrata] gi|297322142|gb|EFH52563.1| hypothetical protein
ARALYDRAFT_485973 [Arabidopsis lyrata subsp. lyrata]
Length = 260
Score = 63.5 bits (153), Expect = 7e-08
Identities = 31/50 (62%), Positives = 36/50 (72%), Gaps = 3/50 (6%)
Frame = +3
Query: 3 NCRPEDLRAPFERFGPVRDVYLPKDYYSG---GFCWFEVKTSPRPAYDEG 143
+CRPE+LR PFERFGPVRDVY+P+DYYSG GF + E AYD G
Sbjct: 56 DCRPEELRVPFERFGPVRDVYIPRDYYSGEPRGFAFVEFV----DAYDAG 101
>emb|CAB75904.1| putative RNA binding protein [Arabidopsis thaliana]
Length = 309
Score = 63.2 bits (152), Expect = 9e-08
Identities = 31/50 (62%), Positives = 36/50 (72%), Gaps = 3/50 (6%)
Frame = +3
Query: 3 NCRPEDLRAPFERFGPVRDVYLPKDYYSG---GFCWFEVKTSPRPAYDEG 143
+CRPE+LR PFERFGPVRDVY+P+DYYSG GF + E AYD G
Sbjct: 57 DCRPEELREPFERFGPVRDVYIPRDYYSGQPRGFAFVEFV----DAYDAG 102
>emb|CAC03602.1| SC35-like splicing factor SCL30, 30 kD [Arabidopsis thaliana]
Length = 262
Score = 63.2 bits (152), Expect = 9e-08
Identities = 31/50 (62%), Positives = 36/50 (72%), Gaps = 3/50 (6%)
Frame = +3
Query: 3 NCRPEDLRAPFERFGPVRDVYLPKDYYSG---GFCWFEVKTSPRPAYDEG 143
+CRPE+LR PFERFGPVRDVY+P+DYYSG GF + E AYD G
Sbjct: 57 DCRPEELREPFERFGPVRDVYIPRDYYSGQPRGFAFVEFV----DAYDAG 102
>ref|NP_567021.1| SC35-like splicing factor 30 [Arabidopsis thaliana]
gi|20466366|gb|AAM20500.1| putative RNA binding protein
[Arabidopsis thaliana] gi|21554261|gb|AAM63336.1|
putative RNA binding protein [Arabidopsis thaliana]
gi|22136316|gb|AAM91236.1| putative RNA binding protein
[Arabidopsis thaliana] gi|332645866|gb|AEE79387.1|
SC35-like splicing factor 30 [Arabidopsis thaliana]
Length = 262
Score = 63.2 bits (152), Expect = 9e-08
Identities = 31/50 (62%), Positives = 36/50 (72%), Gaps = 3/50 (6%)
Frame = +3
Query: 3 NCRPEDLRAPFERFGPVRDVYLPKDYYSG---GFCWFEVKTSPRPAYDEG 143
+CRPE+LR PFERFGPVRDVY+P+DYYSG GF + E AYD G
Sbjct: 57 DCRPEELREPFERFGPVRDVYIPRDYYSGQPRGFAFVEFV----DAYDAG 102
>gb|AGZ15399.1| unknown [Phaseolus vulgaris]
Length = 267
Score = 62.4 bits (150), Expect = 1e-07
Identities = 25/29 (86%), Positives = 28/29 (96%)
Frame = +3
Query: 3 NCRPEDLRAPFERFGPVRDVYLPKDYYSG 89
+CRPE+LR PFERFGPVRDVY+PKDYYSG
Sbjct: 49 DCRPEELRVPFERFGPVRDVYIPKDYYSG 77
>gb|AGV54513.1| splicing factor arginine/serine-rich 13A [Phaseolus vulgaris]
Length = 267
Score = 62.4 bits (150), Expect = 1e-07
Identities = 25/29 (86%), Positives = 28/29 (96%)
Frame = +3
Query: 3 NCRPEDLRAPFERFGPVRDVYLPKDYYSG 89
+CRPE+LR PFERFGPVRDVY+PKDYYSG
Sbjct: 49 DCRPEELRVPFERFGPVRDVYIPKDYYSG 77
>ref|NP_001067091.1| Os12g0572400 [Oryza sativa Japonica Group]
gi|77556878|gb|ABA99674.1| RNA recognition motif family
protein, expressed [Oryza sativa Japonica Group]
gi|113649598|dbj|BAF30110.1| Os12g0572400 [Oryza sativa
Japonica Group] gi|215694562|dbj|BAG89555.1| unnamed
protein product [Oryza sativa Japonica Group]
gi|222617335|gb|EEE53467.1| hypothetical protein
OsJ_36595 [Oryza sativa Japonica Group]
Length = 263
Score = 62.4 bits (150), Expect = 1e-07
Identities = 29/38 (76%), Positives = 31/38 (81%), Gaps = 3/38 (7%)
Frame = +3
Query: 3 NCRPEDLRAPFERFGPVRDVYLPKDYYSG---GFCWFE 107
+CR EDLR PFERFGPVRDVYLPKDYYSG GF + E
Sbjct: 47 SCRGEDLRVPFERFGPVRDVYLPKDYYSGEPRGFAFVE 84
>ref|XP_003545260.1| PREDICTED: serine/arginine-rich splicing factor 33-like [Glycine
max]
Length = 271
Score = 62.4 bits (150), Expect = 1e-07
Identities = 25/29 (86%), Positives = 28/29 (96%)
Frame = +3
Query: 3 NCRPEDLRAPFERFGPVRDVYLPKDYYSG 89
+CRPE+LR PFERFGPVRDVY+PKDYYSG
Sbjct: 50 DCRPEELRVPFERFGPVRDVYIPKDYYSG 78
>ref|XP_003518382.1| PREDICTED: serine/arginine-rich splicing factor 33-like isoform X1
[Glycine max] gi|571441631|ref|XP_006575502.1|
PREDICTED: serine/arginine-rich splicing factor 33-like
isoform X2 [Glycine max]
Length = 276
Score = 62.4 bits (150), Expect = 1e-07
Identities = 25/29 (86%), Positives = 28/29 (96%)
Frame = +3
Query: 3 NCRPEDLRAPFERFGPVRDVYLPKDYYSG 89
+CRPE+LR PFERFGPVRDVY+PKDYYSG
Sbjct: 57 DCRPEELRVPFERFGPVRDVYIPKDYYSG 85
>gb|EEC69539.1| hypothetical protein OsI_38819 [Oryza sativa Indica Group]
Length = 263
Score = 62.4 bits (150), Expect = 1e-07
Identities = 29/38 (76%), Positives = 31/38 (81%), Gaps = 3/38 (7%)
Frame = +3
Query: 3 NCRPEDLRAPFERFGPVRDVYLPKDYYSG---GFCWFE 107
+CR EDLR PFERFGPVRDVYLPKDYYSG GF + E
Sbjct: 47 SCRGEDLRVPFERFGPVRDVYLPKDYYSGEPRGFAFVE 84
>dbj|BAC78592.1| pre-mRNA splicing factor [Oryza sativa Japonica Group]
Length = 232
Score = 62.4 bits (150), Expect = 1e-07
Identities = 29/38 (76%), Positives = 31/38 (81%), Gaps = 3/38 (7%)
Frame = +3
Query: 3 NCRPEDLRAPFERFGPVRDVYLPKDYYSG---GFCWFE 107
+CR EDLR PFERFGPVRDVYLPKDYYSG GF + E
Sbjct: 16 SCRGEDLRVPFERFGPVRDVYLPKDYYSGEPRGFAFVE 53
>ref|XP_006647123.1| PREDICTED: serine/arginine-rich splicing factor 33-like [Oryza
brachyantha]
Length = 263
Score = 61.6 bits (148), Expect = 3e-07
Identities = 28/38 (73%), Positives = 31/38 (81%), Gaps = 3/38 (7%)
Frame = +3
Query: 3 NCRPEDLRAPFERFGPVRDVYLPKDYYSG---GFCWFE 107
+CR EDLR PFERFGPVRDVYLPKDYY+G GF + E
Sbjct: 47 SCRAEDLRVPFERFGPVRDVYLPKDYYTGEPRGFAFVE 84
>ref|XP_007141872.1| hypothetical protein PHAVU_008G232900g [Phaseolus vulgaris]
gi|561015005|gb|ESW13866.1| hypothetical protein
PHAVU_008G232900g [Phaseolus vulgaris]
Length = 267
Score = 61.6 bits (148), Expect = 3e-07
Identities = 25/29 (86%), Positives = 28/29 (96%)
Frame = +3
Query: 3 NCRPEDLRAPFERFGPVRDVYLPKDYYSG 89
+CRPE+LR PFERFGPVRDVY+PKDYYSG
Sbjct: 49 DCRPEELRFPFERFGPVRDVYIPKDYYSG 77
>gb|EMT23970.1| 35 kDa SR repressor protein [Aegilops tauschii]
Length = 333
Score = 61.6 bits (148), Expect = 3e-07
Identities = 28/38 (73%), Positives = 31/38 (81%), Gaps = 3/38 (7%)
Frame = +3
Query: 3 NCRPEDLRAPFERFGPVRDVYLPKDYYS---GGFCWFE 107
+CRPEDLR PFERFGPVRDVYLPKDYY+ GF + E
Sbjct: 111 SCRPEDLRVPFERFGPVRDVYLPKDYYTREPRGFAFVE 148
>ref|NP_001046448.1| Os02g0252100 [Oryza sativa Japonica Group]
gi|47497118|dbj|BAD19168.1| putative pre-mRNA splicing
factor [Oryza sativa Japonica Group]
gi|47497696|dbj|BAD19762.1| putative pre-mRNA splicing
factor [Oryza sativa Japonica Group]
gi|66394215|gb|AAG43284.2| pre-mRNA splicing factor
[Oryza sativa] gi|113535979|dbj|BAF08362.1| Os02g0252100
[Oryza sativa Japonica Group]
gi|215704460|dbj|BAG93894.1| unnamed protein product
[Oryza sativa Japonica Group]
Length = 265
Score = 61.6 bits (148), Expect = 3e-07
Identities = 28/38 (73%), Positives = 31/38 (81%), Gaps = 3/38 (7%)
Frame = +3
Query: 3 NCRPEDLRAPFERFGPVRDVYLPKDYYSG---GFCWFE 107
+CR EDLR PFERFGPVRDVYLPKDYY+G GF + E
Sbjct: 47 SCRAEDLRVPFERFGPVRDVYLPKDYYTGEPRGFAFVE 84
>dbj|BAJ91767.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 262
Score = 61.6 bits (148), Expect = 3e-07
Identities = 28/38 (73%), Positives = 31/38 (81%), Gaps = 3/38 (7%)
Frame = +3
Query: 3 NCRPEDLRAPFERFGPVRDVYLPKDYYS---GGFCWFE 107
+CRPEDLR PFERFGPVRDVYLPKDYY+ GF + E
Sbjct: 47 SCRPEDLRVPFERFGPVRDVYLPKDYYTREPRGFAFVE 84
>emb|CBI31687.3| unnamed protein product [Vitis vinifera]
Length = 353
Score = 61.6 bits (148), Expect = 3e-07
Identities = 26/29 (89%), Positives = 27/29 (93%)
Frame = +3
Query: 3 NCRPEDLRAPFERFGPVRDVYLPKDYYSG 89
NCRPEDLR PFERFG VRDVYLPKDYY+G
Sbjct: 127 NCRPEDLRVPFERFGLVRDVYLPKDYYTG 155