BLASTX nr result
ID: Akebia27_contig00012270
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Akebia27_contig00012270
(416 letters)
Database: ./nr
38,876,450 sequences; 13,856,398,315 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_007027852.1| RNA binding family protein isoform 7 [Theobr... 64 3e-08
ref|XP_007027851.1| RNA binding family protein isoform 6, partia... 64 3e-08
ref|XP_007027848.1| RNA binding family protein isoform 3 [Theobr... 64 3e-08
ref|XP_007027846.1| RNA binding family protein isoform 1 [Theobr... 64 3e-08
ref|XP_002276063.2| PREDICTED: glycine-rich RNA-binding protein ... 61 2e-07
ref|NP_001238370.1| uncharacterized protein LOC100527079 [Glycin... 60 2e-07
ref|XP_007203802.1| hypothetical protein PRUPE_ppa026345mg [Prun... 59 9e-07
ref|XP_006481717.1| PREDICTED: glycine-rich RNA-binding protein ... 58 1e-06
ref|XP_006430132.1| hypothetical protein CICLE_v10012994mg [Citr... 58 2e-06
ref|XP_006836085.1| hypothetical protein AMTR_s00114p00125610 [A... 58 2e-06
gb|EYU35528.1| hypothetical protein MIMGU_mgv1a016093mg [Mimulus... 57 3e-06
ref|XP_004303523.1| PREDICTED: glycine-rich RNA-binding protein ... 56 6e-06
>ref|XP_007027852.1| RNA binding family protein isoform 7 [Theobroma cacao]
gi|508716457|gb|EOY08354.1| RNA binding family protein
isoform 7 [Theobroma cacao]
Length = 111
Score = 63.5 bits (153), Expect = 3e-08
Identities = 32/45 (71%), Positives = 38/45 (84%), Gaps = 1/45 (2%)
Frame = +3
Query: 285 NPK-SSILRPSQLLCCRGIAYKLFVGGLSFYTTENVLLEAFSQFG 416
NPK SS++ P+ L+C RGIA KLFVGGLSFYTTE LL+AFSQ+G
Sbjct: 11 NPKHSSLIPPTLLICRRGIASKLFVGGLSFYTTEKGLLDAFSQYG 55
>ref|XP_007027851.1| RNA binding family protein isoform 6, partial [Theobroma cacao]
gi|508716456|gb|EOY08353.1| RNA binding family protein
isoform 6, partial [Theobroma cacao]
Length = 139
Score = 63.5 bits (153), Expect = 3e-08
Identities = 32/45 (71%), Positives = 38/45 (84%), Gaps = 1/45 (2%)
Frame = +3
Query: 285 NPK-SSILRPSQLLCCRGIAYKLFVGGLSFYTTENVLLEAFSQFG 416
NPK SS++ P+ L+C RGIA KLFVGGLSFYTTE LL+AFSQ+G
Sbjct: 34 NPKHSSLIPPTLLICRRGIASKLFVGGLSFYTTEKGLLDAFSQYG 78
>ref|XP_007027848.1| RNA binding family protein isoform 3 [Theobroma cacao]
gi|590632475|ref|XP_007027850.1| RNA binding family
protein isoform 3 [Theobroma cacao]
gi|508716453|gb|EOY08350.1| RNA binding family protein
isoform 3 [Theobroma cacao] gi|508716455|gb|EOY08352.1|
RNA binding family protein isoform 3 [Theobroma cacao]
Length = 116
Score = 63.5 bits (153), Expect = 3e-08
Identities = 32/45 (71%), Positives = 38/45 (84%), Gaps = 1/45 (2%)
Frame = +3
Query: 285 NPK-SSILRPSQLLCCRGIAYKLFVGGLSFYTTENVLLEAFSQFG 416
NPK SS++ P+ L+C RGIA KLFVGGLSFYTTE LL+AFSQ+G
Sbjct: 11 NPKHSSLIPPTLLICRRGIASKLFVGGLSFYTTEKGLLDAFSQYG 55
>ref|XP_007027846.1| RNA binding family protein isoform 1 [Theobroma cacao]
gi|590632465|ref|XP_007027847.1| RNA binding family
protein isoform 1 [Theobroma cacao]
gi|590632471|ref|XP_007027849.1| RNA binding family
protein isoform 1 [Theobroma cacao]
gi|590632486|ref|XP_007027853.1| RNA binding family
protein isoform 1 [Theobroma cacao]
gi|508716451|gb|EOY08348.1| RNA binding family protein
isoform 1 [Theobroma cacao] gi|508716452|gb|EOY08349.1|
RNA binding family protein isoform 1 [Theobroma cacao]
gi|508716454|gb|EOY08351.1| RNA binding family protein
isoform 1 [Theobroma cacao] gi|508716458|gb|EOY08355.1|
RNA binding family protein isoform 1 [Theobroma cacao]
Length = 129
Score = 63.5 bits (153), Expect = 3e-08
Identities = 32/45 (71%), Positives = 38/45 (84%), Gaps = 1/45 (2%)
Frame = +3
Query: 285 NPK-SSILRPSQLLCCRGIAYKLFVGGLSFYTTENVLLEAFSQFG 416
NPK SS++ P+ L+C RGIA KLFVGGLSFYTTE LL+AFSQ+G
Sbjct: 11 NPKHSSLIPPTLLICRRGIASKLFVGGLSFYTTEKGLLDAFSQYG 55
>ref|XP_002276063.2| PREDICTED: glycine-rich RNA-binding protein 2, mitochondrial-like
[Vitis vinifera] gi|297740158|emb|CBI30340.3| unnamed
protein product [Vitis vinifera]
Length = 133
Score = 60.8 bits (146), Expect = 2e-07
Identities = 29/41 (70%), Positives = 33/41 (80%)
Frame = +3
Query: 294 SSILRPSQLLCCRGIAYKLFVGGLSFYTTENVLLEAFSQFG 416
S +L P+ L+CCRGIA KLFVGGLSFYTTE L E FSQ+G
Sbjct: 18 SFLLPPALLICCRGIASKLFVGGLSFYTTEKGLSEHFSQYG 58
>ref|NP_001238370.1| uncharacterized protein LOC100527079 [Glycine max]
gi|255631508|gb|ACU16121.1| unknown [Glycine max]
Length = 130
Score = 60.5 bits (145), Expect = 2e-07
Identities = 30/42 (71%), Positives = 33/42 (78%)
Frame = +3
Query: 291 KSSILRPSQLLCCRGIAYKLFVGGLSFYTTENVLLEAFSQFG 416
++ IL PS L RGIAYKLFVGGLSFYTTEN L EAFS +G
Sbjct: 12 RNKILSPSLLSFRRGIAYKLFVGGLSFYTTENALSEAFSNYG 53
>ref|XP_007203802.1| hypothetical protein PRUPE_ppa026345mg [Prunus persica]
gi|462399333|gb|EMJ05001.1| hypothetical protein
PRUPE_ppa026345mg [Prunus persica]
Length = 132
Score = 58.5 bits (140), Expect = 9e-07
Identities = 29/51 (56%), Positives = 37/51 (72%)
Frame = +3
Query: 264 LVQHSQSNPKSSILRPSQLLCCRGIAYKLFVGGLSFYTTENVLLEAFSQFG 416
LV+ S S SS++ P+ L+ CRG+ KLFVGGLSFYT + L EAFSQ+G
Sbjct: 7 LVRSSPSLSYSSLIPPAFLISCRGLTTKLFVGGLSFYTNDKGLSEAFSQYG 57
>ref|XP_006481717.1| PREDICTED: glycine-rich RNA-binding protein 3, mitochondrial-like
isoform X1 [Citrus sinensis]
Length = 155
Score = 58.2 bits (139), Expect = 1e-06
Identities = 27/48 (56%), Positives = 35/48 (72%)
Frame = +3
Query: 273 HSQSNPKSSILRPSQLLCCRGIAYKLFVGGLSFYTTENVLLEAFSQFG 416
+S SN S++ P+ + CRGIA KLFVGGLSFYT+ L +AFSQ+G
Sbjct: 18 NSNSNSNCSLIPPTLFISCRGIASKLFVGGLSFYTSNKGLSDAFSQYG 65
>ref|XP_006430132.1| hypothetical protein CICLE_v10012994mg [Citrus clementina]
gi|557532189|gb|ESR43372.1| hypothetical protein
CICLE_v10012994mg [Citrus clementina]
Length = 155
Score = 57.8 bits (138), Expect = 2e-06
Identities = 27/48 (56%), Positives = 35/48 (72%)
Frame = +3
Query: 273 HSQSNPKSSILRPSQLLCCRGIAYKLFVGGLSFYTTENVLLEAFSQFG 416
+S SN S++ P+ + CRGIA KLFVGGLSFYT+ L +AFSQ+G
Sbjct: 18 NSNSNGNCSLIPPTLFISCRGIASKLFVGGLSFYTSNKGLSDAFSQYG 65
>ref|XP_006836085.1| hypothetical protein AMTR_s00114p00125610 [Amborella trichopoda]
gi|548838507|gb|ERM98938.1| hypothetical protein
AMTR_s00114p00125610 [Amborella trichopoda]
Length = 135
Score = 57.8 bits (138), Expect = 2e-06
Identities = 29/36 (80%), Positives = 30/36 (83%)
Frame = +3
Query: 309 PSQLLCCRGIAYKLFVGGLSFYTTENVLLEAFSQFG 416
PSQLL R IA K+FVGGLSFYTTEN L EAFSQFG
Sbjct: 24 PSQLLFSRKIASKVFVGGLSFYTTENALSEAFSQFG 59
>gb|EYU35528.1| hypothetical protein MIMGU_mgv1a016093mg [Mimulus guttatus]
Length = 134
Score = 57.0 bits (136), Expect = 3e-06
Identities = 32/53 (60%), Positives = 37/53 (69%), Gaps = 2/53 (3%)
Frame = +3
Query: 264 LVQHSQSNPKSS--ILRPSQLLCCRGIAYKLFVGGLSFYTTENVLLEAFSQFG 416
L+ S PKS+ +L P+ L+ RGIA KLFVGGLSFYTTE L EAFSQ G
Sbjct: 7 LIMFSSRLPKSNSTVLIPALLISSRGIASKLFVGGLSFYTTEQGLSEAFSQHG 59
>ref|XP_004303523.1| PREDICTED: glycine-rich RNA-binding protein 2, mitochondrial-like
[Fragaria vesca subsp. vesca]
Length = 133
Score = 55.8 bits (133), Expect = 6e-06
Identities = 26/41 (63%), Positives = 33/41 (80%)
Frame = +3
Query: 294 SSILRPSQLLCCRGIAYKLFVGGLSFYTTENVLLEAFSQFG 416
SSI+ P+ L+ CR ++ KLFVGGLSFYTT+ L EAFSQ+G
Sbjct: 18 SSIIPPAILISCRALSTKLFVGGLSFYTTDKGLQEAFSQYG 58