BLASTX nr result

ID: Akebia27_contig00011807 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Akebia27_contig00011807
         (710 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_007009615.1| SAC3/GANP/Nin1/mts3/eIF-3 p25 family isoform...    65   2e-08
ref|XP_007009614.1| SAC3/GANP/Nin1/mts3/eIF-3 p25 family isoform...    65   2e-08
ref|XP_007009613.1| SAC3/GANP/Nin1/mts3/eIF-3 p25 family isoform...    65   2e-08
ref|XP_007009612.1| SAC3/GANP/Nin1/mts3/eIF-3 p25 family isoform...    65   2e-08
ref|XP_002311131.2| SAC3/GANP family protein [Populus trichocarp...    57   2e-06

>ref|XP_007009615.1| SAC3/GANP/Nin1/mts3/eIF-3 p25 family isoform 4 [Theobroma cacao]
           gi|508726528|gb|EOY18425.1| SAC3/GANP/Nin1/mts3/eIF-3
           p25 family isoform 4 [Theobroma cacao]
          Length = 908

 Score = 65.5 bits (158), Expect = 2e-08
 Identities = 44/110 (40%), Positives = 61/110 (55%), Gaps = 11/110 (10%)
 Frame = +2

Query: 263 MMNQGGSNTHNIAQLNHNSLENHQLADAGQGRSSVYXXXXXXXXXXXXXXGSKAVSWSMQ 442
           MMNQ  +NT  +A L+ NS+E+  + +A QG++S Y              GS+A SW+M 
Sbjct: 1   MMNQA-TNTQTLASLDPNSVESRYVVNASQGQTSSYVPSTA---------GSEAASWNMY 50

Query: 443 RTDN-----------SYYHDQRIEPLSRDLQDVPNAASHAVVSSSLGASN 559
           R DN           +Y+H Q+ EP +R +QD  NAAS A  SSSLG +N
Sbjct: 51  RVDNHSVENGSFSNSTYHHVQQTEPSTRTVQDGSNAASLA-TSSSLGTTN 99


>ref|XP_007009614.1| SAC3/GANP/Nin1/mts3/eIF-3 p25 family isoform 3 [Theobroma cacao]
           gi|508726527|gb|EOY18424.1| SAC3/GANP/Nin1/mts3/eIF-3
           p25 family isoform 3 [Theobroma cacao]
          Length = 909

 Score = 65.5 bits (158), Expect = 2e-08
 Identities = 44/110 (40%), Positives = 61/110 (55%), Gaps = 11/110 (10%)
 Frame = +2

Query: 263 MMNQGGSNTHNIAQLNHNSLENHQLADAGQGRSSVYXXXXXXXXXXXXXXGSKAVSWSMQ 442
           MMNQ  +NT  +A L+ NS+E+  + +A QG++S Y              GS+A SW+M 
Sbjct: 1   MMNQA-TNTQTLASLDPNSVESRYVVNASQGQTSSYVPSTA---------GSEAASWNMY 50

Query: 443 RTDN-----------SYYHDQRIEPLSRDLQDVPNAASHAVVSSSLGASN 559
           R DN           +Y+H Q+ EP +R +QD  NAAS A  SSSLG +N
Sbjct: 51  RVDNHSVENGSFSNSTYHHVQQTEPSTRTVQDGSNAASLA-TSSSLGTTN 99


>ref|XP_007009613.1| SAC3/GANP/Nin1/mts3/eIF-3 p25 family isoform 2 [Theobroma cacao]
           gi|508726526|gb|EOY18423.1| SAC3/GANP/Nin1/mts3/eIF-3
           p25 family isoform 2 [Theobroma cacao]
          Length = 1010

 Score = 65.5 bits (158), Expect = 2e-08
 Identities = 44/110 (40%), Positives = 61/110 (55%), Gaps = 11/110 (10%)
 Frame = +2

Query: 263 MMNQGGSNTHNIAQLNHNSLENHQLADAGQGRSSVYXXXXXXXXXXXXXXGSKAVSWSMQ 442
           MMNQ  +NT  +A L+ NS+E+  + +A QG++S Y              GS+A SW+M 
Sbjct: 1   MMNQA-TNTQTLASLDPNSVESRYVVNASQGQTSSYVPSTA---------GSEAASWNMY 50

Query: 443 RTDN-----------SYYHDQRIEPLSRDLQDVPNAASHAVVSSSLGASN 559
           R DN           +Y+H Q+ EP +R +QD  NAAS A  SSSLG +N
Sbjct: 51  RVDNHSVENGSFSNSTYHHVQQTEPSTRTVQDGSNAASLA-TSSSLGTTN 99


>ref|XP_007009612.1| SAC3/GANP/Nin1/mts3/eIF-3 p25 family isoform 1 [Theobroma cacao]
           gi|508726525|gb|EOY18422.1| SAC3/GANP/Nin1/mts3/eIF-3
           p25 family isoform 1 [Theobroma cacao]
          Length = 1011

 Score = 65.5 bits (158), Expect = 2e-08
 Identities = 44/110 (40%), Positives = 61/110 (55%), Gaps = 11/110 (10%)
 Frame = +2

Query: 263 MMNQGGSNTHNIAQLNHNSLENHQLADAGQGRSSVYXXXXXXXXXXXXXXGSKAVSWSMQ 442
           MMNQ  +NT  +A L+ NS+E+  + +A QG++S Y              GS+A SW+M 
Sbjct: 1   MMNQA-TNTQTLASLDPNSVESRYVVNASQGQTSSYVPSTA---------GSEAASWNMY 50

Query: 443 RTDN-----------SYYHDQRIEPLSRDLQDVPNAASHAVVSSSLGASN 559
           R DN           +Y+H Q+ EP +R +QD  NAAS A  SSSLG +N
Sbjct: 51  RVDNHSVENGSFSNSTYHHVQQTEPSTRTVQDGSNAASLA-TSSSLGTTN 99


>ref|XP_002311131.2| SAC3/GANP family protein [Populus trichocarpa]
           gi|550332433|gb|EEE88498.2| SAC3/GANP family protein
           [Populus trichocarpa]
          Length = 967

 Score = 57.4 bits (137), Expect(2) = 2e-06
 Identities = 42/114 (36%), Positives = 55/114 (48%), Gaps = 11/114 (9%)
 Frame = +2

Query: 263 MMNQGGSNTHNIAQLNHNSLENHQLADAGQGRSSVYXXXXXXXXXXXXXXGSKAVSWSMQ 442
           MMNQG  NT  IA ++ NSLE   + D  QG++S Y               S+A  W+M 
Sbjct: 3   MMNQG-VNTQTIASVDPNSLEGRYVVDVSQGQTSSYNPTAYE---------SEAAPWTMH 52

Query: 443 RTDN-----------SYYHDQRIEPLSRDLQDVPNAASHAVVSSSLGASNGPQE 571
           R DN           SY+HD R + L+R  QD  N AS A  SS+ G  +  Q+
Sbjct: 53  RVDNHSTENGILSNSSYHHDHRTQQLARSAQDSLNTASLA-SSSTQGTMSVTQD 105



 Score = 21.2 bits (43), Expect(2) = 2e-06
 Identities = 11/19 (57%), Positives = 12/19 (63%)
 Frame = +3

Query: 654 ISSKLTIRTLNK*ERIKTQ 710
           +SS L IRTL     IKTQ
Sbjct: 136 LSSSLAIRTLQLEGHIKTQ 154


Top