BLASTX nr result
ID: Akebia27_contig00011237
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Akebia27_contig00011237
(1164 letters)
Database: ./nr
38,876,450 sequences; 13,856,398,315 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
emb|CBI30093.3| unnamed protein product [Vitis vinifera] 252 2e-64
ref|XP_003632734.1| PREDICTED: DNA-directed RNA polymerases I, I... 252 2e-64
ref|XP_002323257.2| hypothetical protein POPTR_0016s03800g [Popu... 250 9e-64
gb|EXB41191.1| DNA-directed RNA polymerases I, II, and III subun... 237 8e-60
ref|XP_006442079.1| hypothetical protein CICLE_v10021999mg [Citr... 236 1e-59
ref|XP_002529165.1| DNA-directed RNA polymerase II, putative [Ri... 236 2e-59
ref|XP_006364435.1| PREDICTED: DNA-directed RNA polymerase V sub... 233 9e-59
ref|XP_004237333.1| PREDICTED: DNA-directed RNA polymerases I, I... 232 2e-58
ref|XP_004493418.1| PREDICTED: DNA-directed RNA polymerases I, I... 231 4e-58
ref|NP_001236527.1| uncharacterized protein LOC100306033 [Glycin... 230 8e-58
ref|XP_004303601.1| PREDICTED: DNA-directed RNA polymerases I, I... 229 2e-57
ref|XP_007202529.1| hypothetical protein PRUPE_ppa010980mg [Prun... 228 4e-57
ref|XP_007162116.1| hypothetical protein PHAVU_001G125200g [Phas... 228 5e-57
ref|XP_007028544.1| Eukaryotic rpb5 RNA polymerase subunit famil... 227 8e-57
ref|XP_004136650.1| PREDICTED: DNA-directed RNA polymerases I, I... 227 8e-57
ref|XP_006347844.1| PREDICTED: DNA-directed RNA polymerase V sub... 226 1e-56
gb|AFK43162.1| unknown [Medicago truncatula] 226 2e-56
ref|XP_003625033.1| DNA-directed RNA polymerases I, II, and III ... 225 2e-56
ref|XP_002269723.2| PREDICTED: DNA-directed RNA polymerases I, I... 224 5e-56
emb|CBI35146.3| unnamed protein product [Vitis vinifera] 224 5e-56
>emb|CBI30093.3| unnamed protein product [Vitis vinifera]
Length = 330
Score = 252 bits (644), Expect = 2e-64
Identities = 128/209 (61%), Positives = 157/209 (75%)
Frame = -2
Query: 1085 CMSSWVDRGSVESHRYYLARRTIFEMLRDRGYDVPDSDLDTSLHEFRSIFGQKPDLERLR 906
C+SS+VD G +ESHRYYLARRT+ EMLRDRGY +P D+D SL +FRS + QKPD +RLR
Sbjct: 121 CLSSFVDEGRIESHRYYLARRTLLEMLRDRGYSIPALDIDISLQDFRSFYSQKPDPDRLR 180
Query: 905 ISLPLLSDPSKKILVIFCGNDVVKLGIVRAIFSQISDNHSLTRLILILQSKITPQARQAL 726
IS L SDPSKKILVIFCG DVVK+ +R+I +QI + SL++LIL+LQ+ IT QA +A+
Sbjct: 181 ISAALRSDPSKKILVIFCGPDVVKVNAIRSIATQIVNKDSLSKLILVLQNHITSQALKAV 240
Query: 725 NLCRVKVETCQITDLLVNFTKHILMPKHEILTXXXXXXXXXXXXXXXKQIPRMLETDAVA 546
+L +VE QITDLLVN TKH+L PKH +LT KQ+PRML+ DA+A
Sbjct: 241 DLFSFQVEKFQITDLLVNITKHVLKPKHRVLTDQEKNKLLKKYSLNEKQLPRMLQQDAIA 300
Query: 545 RYYGLEKGQVVKVTSGDDITGSNVTYRCV 459
RYYGLEKGQVVKV +ITGS+VTYRCV
Sbjct: 301 RYYGLEKGQVVKVIYNGEITGSHVTYRCV 329
>ref|XP_003632734.1| PREDICTED: DNA-directed RNA polymerases I, II, and III subunit
RPABC1-like [Vitis vinifera]
Length = 229
Score = 252 bits (644), Expect = 2e-64
Identities = 128/209 (61%), Positives = 157/209 (75%)
Frame = -2
Query: 1085 CMSSWVDRGSVESHRYYLARRTIFEMLRDRGYDVPDSDLDTSLHEFRSIFGQKPDLERLR 906
C+SS+VD G +ESHRYYLARRT+ EMLRDRGY +P D+D SL +FRS + QKPD +RLR
Sbjct: 20 CLSSFVDEGRIESHRYYLARRTLLEMLRDRGYSIPALDIDISLQDFRSFYSQKPDPDRLR 79
Query: 905 ISLPLLSDPSKKILVIFCGNDVVKLGIVRAIFSQISDNHSLTRLILILQSKITPQARQAL 726
IS L SDPSKKILVIFCG DVVK+ +R+I +QI + SL++LIL+LQ+ IT QA +A+
Sbjct: 80 ISAALRSDPSKKILVIFCGPDVVKVNAIRSIATQIVNKDSLSKLILVLQNHITSQALKAV 139
Query: 725 NLCRVKVETCQITDLLVNFTKHILMPKHEILTXXXXXXXXXXXXXXXKQIPRMLETDAVA 546
+L +VE QITDLLVN TKH+L PKH +LT KQ+PRML+ DA+A
Sbjct: 140 DLFSFQVEKFQITDLLVNITKHVLKPKHRVLTDQEKNKLLKKYSLNEKQLPRMLQQDAIA 199
Query: 545 RYYGLEKGQVVKVTSGDDITGSNVTYRCV 459
RYYGLEKGQVVKV +ITGS+VTYRCV
Sbjct: 200 RYYGLEKGQVVKVIYNGEITGSHVTYRCV 228
>ref|XP_002323257.2| hypothetical protein POPTR_0016s03800g [Populus trichocarpa]
gi|550320761|gb|EEF05018.2| hypothetical protein
POPTR_0016s03800g [Populus trichocarpa]
Length = 243
Score = 250 bits (638), Expect = 9e-64
Identities = 124/209 (59%), Positives = 158/209 (75%)
Frame = -2
Query: 1085 CMSSWVDRGSVESHRYYLARRTIFEMLRDRGYDVPDSDLDTSLHEFRSIFGQKPDLERLR 906
C+SS+VD GS ESHRYYL+RRT+ EML+DRGY VP S++D SL +FR ++GQ PD+E L+
Sbjct: 34 CLSSFVDEGSTESHRYYLSRRTVLEMLKDRGYSVPSSEIDISLQDFRGVYGQNPDIELLK 93
Query: 905 ISLPLLSDPSKKILVIFCGNDVVKLGIVRAIFSQISDNHSLTRLILILQSKITPQARQAL 726
S SDPSK++LVIFCG VVK+G++R I QI+D SLT LIL+LQ+ IT QA +AL
Sbjct: 94 FSATHKSDPSKRMLVIFCGLGVVKVGMIRLITVQITDRDSLTGLILVLQNNITNQAMKAL 153
Query: 725 NLCRVKVETCQITDLLVNFTKHILMPKHEILTXXXXXXXXXXXXXXXKQIPRMLETDAVA 546
+L + K+E QITDLLVN TKHIL PKH++L+ KQ+PR+L+ DA++
Sbjct: 154 DLFKFKIEIFQITDLLVNITKHILKPKHQVLSEQAKQRLLKKYSIEEKQLPRLLKKDAIS 213
Query: 545 RYYGLEKGQVVKVTSGDDITGSNVTYRCV 459
RYYGLE+GQVVKVT DITGS+VTYRCV
Sbjct: 214 RYYGLERGQVVKVTYDGDITGSHVTYRCV 242
>gb|EXB41191.1| DNA-directed RNA polymerases I, II, and III subunit RPABC1 [Morus
notabilis]
Length = 231
Score = 237 bits (604), Expect = 8e-60
Identities = 125/228 (54%), Positives = 159/228 (69%), Gaps = 13/228 (5%)
Frame = -2
Query: 1103 EDGGSS-------------CMSSWVDRGSVESHRYYLARRTIFEMLRDRGYDVPDSDLDT 963
E+GGSS C+SS +D+GSVESHRY+L+R T+ EML+DRGY VP SD++
Sbjct: 3 ENGGSSGGGGEPNGETLGTCLSSLIDKGSVESHRYFLSRITLLEMLKDRGYSVPSSDINL 62
Query: 962 SLHEFRSIFGQKPDLERLRISLPLLSDPSKKILVIFCGNDVVKLGIVRAIFSQISDNHSL 783
SLH+FR I+GQ PD++RLR S+ LSDPSK+ILVIFC VVK+ VR I QI + ++L
Sbjct: 63 SLHDFRQIYGQIPDVDRLRFSVTHLSDPSKRILVIFCEPGVVKVTSVRGIAGQIVNRNTL 122
Query: 782 TRLILILQSKITPQARQALNLCRVKVETCQITDLLVNFTKHILMPKHEILTXXXXXXXXX 603
T LIL+LQS++T QA++A+ L KVE QITDLL+N TKH+L PKH +LT
Sbjct: 123 TGLILVLQSQMTNQAQKAVELLPFKVEIFQITDLLINITKHLLRPKHRVLTDQEKQKLLK 182
Query: 602 XXXXXXKQIPRMLETDAVARYYGLEKGQVVKVTSGDDITGSNVTYRCV 459
KQ+PRM + DA+ARYYGLEKGQVVK+ IT S +TYRCV
Sbjct: 183 KYSIEVKQLPRMSKNDAIARYYGLEKGQVVKIIYSGGITDSYITYRCV 230
>ref|XP_006442079.1| hypothetical protein CICLE_v10021999mg [Citrus clementina]
gi|568879109|ref|XP_006492520.1| PREDICTED: DNA-directed
RNA polymerase V subunit 5A-like isoform X1 [Citrus
sinensis] gi|557544341|gb|ESR55319.1| hypothetical
protein CICLE_v10021999mg [Citrus clementina]
Length = 236
Score = 236 bits (603), Expect = 1e-59
Identities = 119/210 (56%), Positives = 159/210 (75%)
Frame = -2
Query: 1088 SCMSSWVDRGSVESHRYYLARRTIFEMLRDRGYDVPDSDLDTSLHEFRSIFGQKPDLERL 909
SC+S +VD GS +S RYYL+RRT+ EML+DRGY V S+++ S+ +FR+I+GQ PD++RL
Sbjct: 26 SCLSGFVDNGSRDSLRYYLSRRTVLEMLKDRGYAVALSEINLSVQDFRAIYGQDPDVDRL 85
Query: 908 RISLPLLSDPSKKILVIFCGNDVVKLGIVRAIFSQISDNHSLTRLILILQSKITPQARQA 729
RIS+ SDPSK+ILV+FCG +VK+ ++R+I SQI + +LT LILILQ++IT QA +A
Sbjct: 86 RISISHQSDPSKRILVVFCGPGIVKVNVIRSIISQIVNRDTLTGLILILQNQITSQATKA 145
Query: 728 LNLCRVKVETCQITDLLVNFTKHILMPKHEILTXXXXXXXXXXXXXXXKQIPRMLETDAV 549
+ L + KVE QITDLLVN TKH+L PKH++LT KQ+PRML+ DA+
Sbjct: 146 VGLFQFKVEMFQITDLLVNITKHVLKPKHQVLTDQEKEKLLKKYSIEEKQLPRMLKKDAI 205
Query: 548 ARYYGLEKGQVVKVTSGDDITGSNVTYRCV 459
A+YYGLE+GQVVKVT +IT S+VTYRCV
Sbjct: 206 AQYYGLERGQVVKVTYSGEITESHVTYRCV 235
>ref|XP_002529165.1| DNA-directed RNA polymerase II, putative [Ricinus communis]
gi|223531389|gb|EEF33224.1| DNA-directed RNA polymerase
II, putative [Ricinus communis]
Length = 238
Score = 236 bits (601), Expect = 2e-59
Identities = 119/214 (55%), Positives = 154/214 (71%)
Frame = -2
Query: 1100 DGGSSCMSSWVDRGSVESHRYYLARRTIFEMLRDRGYDVPDSDLDTSLHEFRSIFGQKPD 921
+G C SS+ D G+ E+HRYYL+RRT+ EMLRDRGY VP S++D SL EFR+I G PD
Sbjct: 24 EGLGKCFSSYADDGTHETHRYYLSRRTVLEMLRDRGYSVPSSEIDLSLQEFRAIHGPNPD 83
Query: 920 LERLRISLPLLSDPSKKILVIFCGNDVVKLGIVRAIFSQISDNHSLTRLILILQSKITPQ 741
++RL+ S SDPSK++LV+F G ++K+ +RAI QI + SLT LIL+LQ++IT Q
Sbjct: 84 IDRLKFSATHTSDPSKRMLVLFGGPGIIKVSTIRAIAGQIVNKDSLTGLILVLQNQITNQ 143
Query: 740 ARQALNLCRVKVETCQITDLLVNFTKHILMPKHEILTXXXXXXXXXXXXXXXKQIPRMLE 561
A +A++L + KVE QITDLLVN TKH+L PKH++LT KQ+PR+L
Sbjct: 144 AMKAVDLFKFKVEMFQITDLLVNITKHVLKPKHQVLTDREKQKLLKDYCIEEKQLPRLLR 203
Query: 560 TDAVARYYGLEKGQVVKVTSGDDITGSNVTYRCV 459
DA+ARYYGLEKGQVVKVT +IT S+VTYRCV
Sbjct: 204 KDAIARYYGLEKGQVVKVTYSGEITESHVTYRCV 237
>ref|XP_006364435.1| PREDICTED: DNA-directed RNA polymerase V subunit 5A-like [Solanum
tuberosum]
Length = 227
Score = 233 bits (595), Expect = 9e-59
Identities = 115/214 (53%), Positives = 158/214 (73%)
Frame = -2
Query: 1100 DGGSSCMSSWVDRGSVESHRYYLARRTIFEMLRDRGYDVPDSDLDTSLHEFRSIFGQKPD 921
D +C++S+VD G+VESHRY+LARRTI EML+DRG+ +P+S++DT+L EFR +GQ PD
Sbjct: 13 DNLGTCLASFVDDGTVESHRYFLARRTILEMLKDRGFAIPNSEIDTTLQEFREKYGQTPD 72
Query: 920 LERLRISLPLLSDPSKKILVIFCGNDVVKLGIVRAIFSQISDNHSLTRLILILQSKITPQ 741
+ERLR+S +D + K+LVIFCG + VK+ ++R+I +QI + SL+RLIL++Q+++T
Sbjct: 73 VERLRVSAMHRNDLTNKVLVIFCGPNAVKVNVIRSILTQIMNKESLSRLILVIQNQMTNP 132
Query: 740 ARQALNLCRVKVETCQITDLLVNFTKHILMPKHEILTXXXXXXXXXXXXXXXKQIPRMLE 561
A +A+ L KVE QITDLLVN TKH+L P+HE+LT KQ+PRM +
Sbjct: 133 AMKAVELFSFKVEIFQITDLLVNITKHVLKPRHELLTDTEKEKLLKKYNLEEKQLPRMSQ 192
Query: 560 TDAVARYYGLEKGQVVKVTSGDDITGSNVTYRCV 459
DA+ARYYGLEKGQVVKVT +I ++VTYRCV
Sbjct: 193 KDAIARYYGLEKGQVVKVTYSSEIIETHVTYRCV 226
>ref|XP_004237333.1| PREDICTED: DNA-directed RNA polymerases I, II, and III subunit
RPABC1-like [Solanum lycopersicum]
Length = 227
Score = 232 bits (592), Expect = 2e-58
Identities = 114/210 (54%), Positives = 157/210 (74%)
Frame = -2
Query: 1088 SCMSSWVDRGSVESHRYYLARRTIFEMLRDRGYDVPDSDLDTSLHEFRSIFGQKPDLERL 909
+C++S+VD G+VESHRY+LARRTI EML+DRG+ +P+S++DT+L EFR +GQ PD+ERL
Sbjct: 17 TCLASFVDDGTVESHRYFLARRTILEMLKDRGFAIPNSEIDTTLQEFREKYGQTPDVERL 76
Query: 908 RISLPLLSDPSKKILVIFCGNDVVKLGIVRAIFSQISDNHSLTRLILILQSKITPQARQA 729
R+S +D + K+LVIFCG + VK+ ++R+I +QI + SL+RLIL++Q+++T A +A
Sbjct: 77 RVSAMHRNDLTNKVLVIFCGPNAVKVNVIRSILTQIMNKESLSRLILVIQNQMTNPALKA 136
Query: 728 LNLCRVKVETCQITDLLVNFTKHILMPKHEILTXXXXXXXXXXXXXXXKQIPRMLETDAV 549
+ L KVE QITDLLVN TKH+L P+HE+LT KQ+PRM + DA+
Sbjct: 137 VELFSFKVEIFQITDLLVNITKHVLKPRHELLTDTEKEKLLKKYNLEEKQLPRMSQKDAI 196
Query: 548 ARYYGLEKGQVVKVTSGDDITGSNVTYRCV 459
ARYYGLEKGQVVKVT +I ++VTYRCV
Sbjct: 197 ARYYGLEKGQVVKVTYSSEIIETHVTYRCV 226
>ref|XP_004493418.1| PREDICTED: DNA-directed RNA polymerases I, II, and III subunit
RPABC1-like [Cicer arietinum]
Length = 244
Score = 231 bits (589), Expect = 4e-58
Identities = 118/209 (56%), Positives = 150/209 (71%)
Frame = -2
Query: 1085 CMSSWVDRGSVESHRYYLARRTIFEMLRDRGYDVPDSDLDTSLHEFRSIFGQKPDLERLR 906
C+ + +D GSVESHRYYL+RRT EML+DRGY +P S++ SLHEFR G PD++RLR
Sbjct: 35 CLITKIDDGSVESHRYYLSRRTTLEMLKDRGYSIPPSEIQLSLHEFRQTHGHSPDVDRLR 94
Query: 905 ISLPLLSDPSKKILVIFCGNDVVKLGIVRAIFSQISDNHSLTRLILILQSKITPQARQAL 726
+ ++PSK+ILVIF G +VK+ +VR I QI + +LT LILI+QS+IT QA +A+
Sbjct: 95 FTATHTTNPSKRILVIFSGPGIVKVNVVRNIAGQIVNRDTLTGLILIVQSQITSQALKAV 154
Query: 725 NLCRVKVETCQITDLLVNFTKHILMPKHEILTXXXXXXXXXXXXXXXKQIPRMLETDAVA 546
NL KVE QITDLLVN TKH+L PKH++LT KQ+PRML+TDA+A
Sbjct: 155 NLLSFKVEIFQITDLLVNITKHVLKPKHQVLTDKQKKNLLKKYNIQEKQLPRMLQTDAIA 214
Query: 545 RYYGLEKGQVVKVTSGDDITGSNVTYRCV 459
RYYGLE+GQVVKVT +IT +VTYRCV
Sbjct: 215 RYYGLERGQVVKVTYTGEITQMHVTYRCV 243
>ref|NP_001236527.1| uncharacterized protein LOC100306033 [Glycine max]
gi|255627335|gb|ACU14012.1| unknown [Glycine max]
Length = 237
Score = 230 bits (587), Expect = 8e-58
Identities = 118/209 (56%), Positives = 150/209 (71%)
Frame = -2
Query: 1085 CMSSWVDRGSVESHRYYLARRTIFEMLRDRGYDVPDSDLDTSLHEFRSIFGQKPDLERLR 906
C+S +VD GSVESHRYYL+RRT EML+DRGY +P ++D SL +FR I GQ PD +RLR
Sbjct: 28 CLSKFVDNGSVESHRYYLSRRTTLEMLKDRGYSIPSHEIDLSLSDFRDIHGQFPDPDRLR 87
Query: 905 ISLPLLSDPSKKILVIFCGNDVVKLGIVRAIFSQISDNHSLTRLILILQSKITPQARQAL 726
+SL ++ SK+ILVIFCG VVK+ +R QI + +LT LILI+++ IT QA +A+
Sbjct: 88 LSLTHATNSSKRILVIFCGPGVVKVTAIRNTAGQIINRDTLTGLILIVENHITSQALKAV 147
Query: 725 NLCRVKVETCQITDLLVNFTKHILMPKHEILTXXXXXXXXXXXXXXXKQIPRMLETDAVA 546
NL KVE QITDLLVN TKH+L PKH++LT KQ+PRML+TDA+A
Sbjct: 148 NLFSFKVEIFQITDLLVNITKHVLKPKHQVLTDKQKINLLKKYNIEEKQLPRMLQTDAIA 207
Query: 545 RYYGLEKGQVVKVTSGDDITGSNVTYRCV 459
RYYGLE+GQVVKVT ++T +VTYRCV
Sbjct: 208 RYYGLERGQVVKVTYSGEVTQMHVTYRCV 236
>ref|XP_004303601.1| PREDICTED: DNA-directed RNA polymerases I, II, and III subunit
RPABC1-like isoform 1 [Fragaria vesca subsp. vesca]
Length = 225
Score = 229 bits (584), Expect = 2e-57
Identities = 114/209 (54%), Positives = 151/209 (72%)
Frame = -2
Query: 1085 CMSSWVDRGSVESHRYYLARRTIFEMLRDRGYDVPDSDLDTSLHEFRSIFGQKPDLERLR 906
C+S +VD GS ESHRY+L+RRT+ EMLRDRGY VP S++D SL +FRS+ GQ PD +RL
Sbjct: 16 CLSGFVDDGSTESHRYFLSRRTVLEMLRDRGYSVPSSEIDLSLQDFRSLHGQNPDADRLC 75
Query: 905 ISLPLLSDPSKKILVIFCGNDVVKLGIVRAIFSQISDNHSLTRLILILQSKITPQARQAL 726
S SDPS+++LVI+CG +VK+ ++R + SQI++ +L+ LILILQ +IT QA + L
Sbjct: 76 FSTVHSSDPSERMLVIYCGPGIVKVNVIRGLHSQIANKDTLSGLILILQGQITSQALKTL 135
Query: 725 NLCRVKVETCQITDLLVNFTKHILMPKHEILTXXXXXXXXXXXXXXXKQIPRMLETDAVA 546
+L KVE QITDLLVN TKH+L P+H++LT KQ+PR+ + DA+A
Sbjct: 136 DLYPFKVEIFQITDLLVNITKHVLKPQHQVLTEQAKQALLKKFNIEEKQLPRISQKDAIA 195
Query: 545 RYYGLEKGQVVKVTSGDDITGSNVTYRCV 459
+YYGLE+GQVVKVT DIT +VTYRCV
Sbjct: 196 KYYGLERGQVVKVTYSGDITKGHVTYRCV 224
>ref|XP_007202529.1| hypothetical protein PRUPE_ppa010980mg [Prunus persica]
gi|462398060|gb|EMJ03728.1| hypothetical protein
PRUPE_ppa010980mg [Prunus persica]
Length = 228
Score = 228 bits (581), Expect = 4e-57
Identities = 111/209 (53%), Positives = 147/209 (70%)
Frame = -2
Query: 1085 CMSSWVDRGSVESHRYYLARRTIFEMLRDRGYDVPDSDLDTSLHEFRSIFGQKPDLERLR 906
C++ +VD GS ESHRYYL+RRT+ EM+RDRGY VP S++D SL +FR++ GQ PD+ERLR
Sbjct: 19 CLTGYVDDGSPESHRYYLSRRTVLEMIRDRGYSVPSSEIDLSLQDFRALHGQNPDVERLR 78
Query: 905 ISLPLLSDPSKKILVIFCGNDVVKLGIVRAIFSQISDNHSLTRLILILQSKITPQARQAL 726
S +DPS +I+VI+CG +VK+ ++R + SQI++ +L LILI Q++IT QA + +
Sbjct: 79 FSATHRTDPSDRIMVIYCGPGIVKVNVIRGLHSQIANKDTLNGLILITQNQITSQALKTM 138
Query: 725 NLCRVKVETCQITDLLVNFTKHILMPKHEILTXXXXXXXXXXXXXXXKQIPRMLETDAVA 546
L K E QITDLLVN TKH+L PKH +LT Q+PR+ DA+A
Sbjct: 139 ELYPFKTEIFQITDLLVNITKHVLKPKHHVLTEQEKQKLLKKYNIEENQLPRLSRKDAIA 198
Query: 545 RYYGLEKGQVVKVTSGDDITGSNVTYRCV 459
+YYGLEKGQVVKVT DIT S+VTYRC+
Sbjct: 199 QYYGLEKGQVVKVTYTGDITESHVTYRCI 227
>ref|XP_007162116.1| hypothetical protein PHAVU_001G125200g [Phaseolus vulgaris]
gi|561035580|gb|ESW34110.1| hypothetical protein
PHAVU_001G125200g [Phaseolus vulgaris]
Length = 242
Score = 228 bits (580), Expect = 5e-57
Identities = 114/209 (54%), Positives = 151/209 (72%)
Frame = -2
Query: 1085 CMSSWVDRGSVESHRYYLARRTIFEMLRDRGYDVPDSDLDTSLHEFRSIFGQKPDLERLR 906
C+S ++D G+VESHRYYL+RRT EML+DRGY +P +++D SL +FR + G PD +RLR
Sbjct: 33 CLSKFIDDGTVESHRYYLSRRTTLEMLKDRGYSIPSNEIDLSLSQFRHMHGHSPDPDRLR 92
Query: 905 ISLPLLSDPSKKILVIFCGNDVVKLGIVRAIFSQISDNHSLTRLILILQSKITPQARQAL 726
+SL ++PSK+ILVIFCG VVK+ +R I QI + +L+ LILI+++ +T QA +A+
Sbjct: 93 LSLAHATNPSKRILVIFCGPGVVKVTAIRNIAGQIVNRDTLSGLILIVENHVTSQALKAV 152
Query: 725 NLCRVKVETCQITDLLVNFTKHILMPKHEILTXXXXXXXXXXXXXXXKQIPRMLETDAVA 546
L KVE QITDLLVN TKH+L PKH++LT KQ+PRML+TDA+A
Sbjct: 153 GLFSFKVEIFQITDLLVNITKHVLKPKHQVLTDRQKKNLLKKFNIEEKQLPRMLQTDAIA 212
Query: 545 RYYGLEKGQVVKVTSGDDITGSNVTYRCV 459
RYYGLE+GQVVKVT +IT +VTYRCV
Sbjct: 213 RYYGLERGQVVKVTYSGEITQMHVTYRCV 241
>ref|XP_007028544.1| Eukaryotic rpb5 RNA polymerase subunit family protein isoform 1
[Theobroma cacao] gi|508717149|gb|EOY09046.1| Eukaryotic
rpb5 RNA polymerase subunit family protein isoform 1
[Theobroma cacao]
Length = 228
Score = 227 bits (578), Expect = 8e-57
Identities = 118/209 (56%), Positives = 150/209 (71%)
Frame = -2
Query: 1085 CMSSWVDRGSVESHRYYLARRTIFEMLRDRGYDVPDSDLDTSLHEFRSIFGQKPDLERLR 906
C+S VD GS ESHRYYL+RRT+ EMLRDRGY VP S+++ SL EFR+I+GQ PD +RLR
Sbjct: 19 CLSGVVDDGSTESHRYYLSRRTVLEMLRDRGYAVPISEINLSLQEFRAIYGQSPDFDRLR 78
Query: 905 ISLPLLSDPSKKILVIFCGNDVVKLGIVRAIFSQISDNHSLTRLILILQSKITPQARQAL 726
+S +DPSK+ILV+F G +VK+ +R I I++ SLT LIL+LQ+ IT QA +AL
Sbjct: 79 LSATHKTDPSKRILVVFYGPGMVKVSGIRLIAGLITNKESLTGLILVLQNHITNQALKAL 138
Query: 725 NLCRVKVETCQITDLLVNFTKHILMPKHEILTXXXXXXXXXXXXXXXKQIPRMLETDAVA 546
+L KVE QITDLLVN TKH+L PKH++LT KQ+PR+L+ DA+A
Sbjct: 139 DLFSFKVEIFQITDLLVNITKHVLKPKHQVLTEQEKQKLLQKYSIEEKQLPRLLKKDAIA 198
Query: 545 RYYGLEKGQVVKVTSGDDITGSNVTYRCV 459
RYYG E+GQVVKV +IT S+VTYRCV
Sbjct: 199 RYYGYERGQVVKVMYDGEITQSHVTYRCV 227
>ref|XP_004136650.1| PREDICTED: DNA-directed RNA polymerases I, II, and III subunit
RPABC1-like [Cucumis sativus]
gi|449524637|ref|XP_004169328.1| PREDICTED: DNA-directed
RNA polymerases I, II, and III subunit RPABC1-like
[Cucumis sativus]
Length = 227
Score = 227 bits (578), Expect = 8e-57
Identities = 113/210 (53%), Positives = 150/210 (71%)
Frame = -2
Query: 1088 SCMSSWVDRGSVESHRYYLARRTIFEMLRDRGYDVPDSDLDTSLHEFRSIFGQKPDLERL 909
+C+SS++D G+ ESHRY+L+RRT+ EML+DRGY + ++D SL +FR FGQ PD++RL
Sbjct: 17 TCLSSYIDDGTTESHRYFLSRRTVVEMLKDRGYTINSPNIDFSLQQFRETFGQFPDVDRL 76
Query: 908 RISLPLLSDPSKKILVIFCGNDVVKLGIVRAIFSQISDNHSLTRLILILQSKITPQARQA 729
++S SDPSK++LV+FCG VK+ +R I QI++ SL LILI+Q++IT QA +A
Sbjct: 77 KLSAAHHSDPSKRVLVVFCGTGAVKVNAIRNIAGQIANKDSLHGLILIVQNQITNQAMKA 136
Query: 728 LNLCRVKVETCQITDLLVNFTKHILMPKHEILTXXXXXXXXXXXXXXXKQIPRMLETDAV 549
+ L KVE QITDLLVN TKH L P H++LT KQ+PRML TDA+
Sbjct: 137 VELFSFKVEIFQITDLLVNITKHALKPNHQVLTEEEKQKLLKQYSIEEKQLPRMLRTDAI 196
Query: 548 ARYYGLEKGQVVKVTSGDDITGSNVTYRCV 459
ARYYGLEKGQVVKVT D+T +++TYRCV
Sbjct: 197 ARYYGLEKGQVVKVTYDGDMTRAHITYRCV 226
>ref|XP_006347844.1| PREDICTED: DNA-directed RNA polymerase V subunit 5A-like [Solanum
tuberosum]
Length = 227
Score = 226 bits (577), Expect = 1e-56
Identities = 113/211 (53%), Positives = 154/211 (72%)
Frame = -2
Query: 1091 SSCMSSWVDRGSVESHRYYLARRTIFEMLRDRGYDVPDSDLDTSLHEFRSIFGQKPDLER 912
S C++S+VD G+VESHRY+LAR+T+ EML+DRG+ +P+S++DT+L EFR +GQ+PD ER
Sbjct: 16 SPCLASFVDDGTVESHRYFLARKTMLEMLKDRGFAIPNSEIDTTLQEFREKYGQRPDAER 75
Query: 911 LRISLPLLSDPSKKILVIFCGNDVVKLGIVRAIFSQISDNHSLTRLILILQSKITPQARQ 732
LRIS +D + K+LVIFCG + VK+ ++R+I SQI + SL+RLILI+++ +T A +
Sbjct: 76 LRISAMHRTDLTNKVLVIFCGPNSVKMNVIRSILSQIMNKESLSRLILIIENPMTNPAMK 135
Query: 731 ALNLCRVKVETCQITDLLVNFTKHILMPKHEILTXXXXXXXXXXXXXXXKQIPRMLETDA 552
+ K E QITDLLVN TKH+L PKHE+LT KQ+PRM + DA
Sbjct: 136 VVEDSPFKTEIFQITDLLVNITKHVLKPKHELLTNTEKEQLLKKYNLEDKQLPRMSQKDA 195
Query: 551 VARYYGLEKGQVVKVTSGDDITGSNVTYRCV 459
+ARYYGLEKGQVVKVT ++I ++VTYRCV
Sbjct: 196 IARYYGLEKGQVVKVTYNNEIIETHVTYRCV 226
>gb|AFK43162.1| unknown [Medicago truncatula]
Length = 248
Score = 226 bits (575), Expect = 2e-56
Identities = 114/209 (54%), Positives = 150/209 (71%)
Frame = -2
Query: 1085 CMSSWVDRGSVESHRYYLARRTIFEMLRDRGYDVPDSDLDTSLHEFRSIFGQKPDLERLR 906
C+ + D GS+ESHRYYL+RRT+ EML+DRGY +P ++ SL +FR I GQ PD++RLR
Sbjct: 39 CLFTKKDNGSIESHRYYLSRRTVLEMLKDRGYSIPSDEIQLSLDDFRQIHGQSPDVDRLR 98
Query: 905 ISLPLLSDPSKKILVIFCGNDVVKLGIVRAIFSQISDNHSLTRLILILQSKITPQARQAL 726
++ ++PSK+ILV+F G +VK+ VR I QI + SLT LILI+Q++IT QA +A+
Sbjct: 99 LTATHATNPSKRILVVFSGPGIVKVNGVRDIAGQIVNRESLTGLILIVQNQITSQALKAV 158
Query: 725 NLCRVKVETCQITDLLVNFTKHILMPKHEILTXXXXXXXXXXXXXXXKQIPRMLETDAVA 546
NL KVE QITDLLVN TKH+L PKH++LT KQ+PRML+TDA+A
Sbjct: 159 NLLSFKVEILQITDLLVNATKHVLKPKHQVLTDKQKKNLLKKYDIQEKQLPRMLQTDAIA 218
Query: 545 RYYGLEKGQVVKVTSGDDITGSNVTYRCV 459
RYYGL++GQVVKVT +IT +VTYRCV
Sbjct: 219 RYYGLQRGQVVKVTYTGEITQMHVTYRCV 247
>ref|XP_003625033.1| DNA-directed RNA polymerases I, II, and III subunit RPABC1 [Medicago
truncatula] gi|124359979|gb|ABN07995.1| RNA polymerase
subunit, RPB5; RNA polymerase Rpb5, N-terminal [Medicago
truncatula] gi|355500048|gb|AES81251.1| DNA-directed RNA
polymerases I, II, and III subunit RPABC1 [Medicago
truncatula]
Length = 248
Score = 225 bits (574), Expect = 2e-56
Identities = 114/209 (54%), Positives = 150/209 (71%)
Frame = -2
Query: 1085 CMSSWVDRGSVESHRYYLARRTIFEMLRDRGYDVPDSDLDTSLHEFRSIFGQKPDLERLR 906
C+ + D GS+ESHRYYL+RRT+ EML+DRGY +P ++ SL +FR I GQ PD++RLR
Sbjct: 39 CLFTKKDNGSIESHRYYLSRRTVLEMLKDRGYSIPSDEIQLSLDDFRQIHGQSPDVDRLR 98
Query: 905 ISLPLLSDPSKKILVIFCGNDVVKLGIVRAIFSQISDNHSLTRLILILQSKITPQARQAL 726
++ ++PSK+ILV+F G +VK+ VR I QI + SLT LILI+Q++IT QA +A+
Sbjct: 99 LTATHATNPSKRILVVFSGPGIVKVNGVRDIAGQIVNRESLTGLILIVQNQITSQALKAV 158
Query: 725 NLCRVKVETCQITDLLVNFTKHILMPKHEILTXXXXXXXXXXXXXXXKQIPRMLETDAVA 546
NL KVE QITDLLVN TKH+L PKH++LT KQ+PRML+TDA+A
Sbjct: 159 NLLSFKVEIFQITDLLVNATKHVLKPKHQVLTDKQKKNLLKKYDIQEKQLPRMLQTDAIA 218
Query: 545 RYYGLEKGQVVKVTSGDDITGSNVTYRCV 459
RYYGL++GQVVKVT +IT +VTYRCV
Sbjct: 219 RYYGLQRGQVVKVTYTGEITQMHVTYRCV 247
>ref|XP_002269723.2| PREDICTED: DNA-directed RNA polymerases I, II, and III subunit
RPABC1-like [Vitis vinifera]
Length = 221
Score = 224 bits (571), Expect = 5e-56
Identities = 114/213 (53%), Positives = 151/213 (70%)
Frame = -2
Query: 1097 GGSSCMSSWVDRGSVESHRYYLARRTIFEMLRDRGYDVPDSDLDTSLHEFRSIFGQKPDL 918
G SC+++ +++GS+ES+RYYL+RRT+F+ML DRGY+VP S+L SL +FR+ FG PD
Sbjct: 9 GNGSCITADMEQGSIESYRYYLSRRTLFQMLSDRGYNVPHSELTRSLSDFRASFGHNPDP 68
Query: 917 ERLRISLPLLSDPSKKILVIFCGNDVVKLGIVRAIFSQISDNHSLTRLILILQSKITPQA 738
RLRI LPL+S PSKKILV+FCG D ++ ++R IF QI + L RLIL+LQSK+ A
Sbjct: 69 SRLRICLPLISSPSKKILVVFCGTDEIRKAVIRVIFQQI-NREGLHRLILVLQSKMNSHA 127
Query: 737 RQALNLCRVKVETCQITDLLVNFTKHILMPKHEILTXXXXXXXXXXXXXXXKQIPRMLET 558
R+ ++ +KVE QIT+LL+N TKH+ +PKHEIL+ KQ P M +
Sbjct: 128 RKVVDEYPIKVEFFQITELLINITKHVSVPKHEILSAQEKRKLVNKYKLEDKQFPIMQKD 187
Query: 557 DAVARYYGLEKGQVVKVTSGDDITGSNVTYRCV 459
DA+ARYYGLEKGQVVK+T +T S VTYRCV
Sbjct: 188 DAIARYYGLEKGQVVKITYKGGMTDSLVTYRCV 220
>emb|CBI35146.3| unnamed protein product [Vitis vinifera]
Length = 731
Score = 224 bits (571), Expect = 5e-56
Identities = 114/213 (53%), Positives = 151/213 (70%)
Frame = -2
Query: 1097 GGSSCMSSWVDRGSVESHRYYLARRTIFEMLRDRGYDVPDSDLDTSLHEFRSIFGQKPDL 918
G SC+++ +++GS+ES+RYYL+RRT+F+ML DRGY+VP S+L SL +FR+ FG PD
Sbjct: 519 GNGSCITADMEQGSIESYRYYLSRRTLFQMLSDRGYNVPHSELTRSLSDFRASFGHNPDP 578
Query: 917 ERLRISLPLLSDPSKKILVIFCGNDVVKLGIVRAIFSQISDNHSLTRLILILQSKITPQA 738
RLRI LPL+S PSKKILV+FCG D ++ ++R IF QI + L RLIL+LQSK+ A
Sbjct: 579 SRLRICLPLISSPSKKILVVFCGTDEIRKAVIRVIFQQI-NREGLHRLILVLQSKMNSHA 637
Query: 737 RQALNLCRVKVETCQITDLLVNFTKHILMPKHEILTXXXXXXXXXXXXXXXKQIPRMLET 558
R+ ++ +KVE QIT+LL+N TKH+ +PKHEIL+ KQ P M +
Sbjct: 638 RKVVDEYPIKVEFFQITELLINITKHVSVPKHEILSAQEKRKLVNKYKLEDKQFPIMQKD 697
Query: 557 DAVARYYGLEKGQVVKVTSGDDITGSNVTYRCV 459
DA+ARYYGLEKGQVVK+T +T S VTYRCV
Sbjct: 698 DAIARYYGLEKGQVVKITYKGGMTDSLVTYRCV 730