BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Akebia27_contig00010314
         (1227 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI34982.3| unnamed protein product [Vitis vinifera]              569   e-159
ref|XP_002275511.1| PREDICTED: chloroplastic group IIA intron sp...   569   e-159
ref|XP_007217083.1| hypothetical protein PRUPE_ppa000515mg [Prun...   559   e-157
ref|XP_006849108.1| hypothetical protein AMTR_s00028p00245370 [A...   543   e-152
gb|EXC45069.1| Chloroplastic group IIA intron splicing facilitat...   543   e-152
ref|XP_007031356.1| CRM family member 2, putative isoform 2 [The...   536   e-150
ref|XP_007031355.1| CRM family member 2, putative isoform 1 [The...   536   e-150
ref|XP_004297960.1| PREDICTED: uncharacterized protein LOC101297...   535   e-149
ref|XP_006482481.1| PREDICTED: chloroplastic group IIA intron sp...   530   e-148
ref|XP_006482480.1| PREDICTED: chloroplastic group IIA intron sp...   530   e-148
ref|XP_006482479.1| PREDICTED: chloroplastic group IIA intron sp...   530   e-148
ref|XP_006482478.1| PREDICTED: chloroplastic group IIA intron sp...   530   e-148
ref|XP_006482476.1| PREDICTED: chloroplastic group IIA intron sp...   530   e-148
ref|XP_006431007.1| hypothetical protein CICLE_v10013715mg [Citr...   526   e-147
ref|XP_004147480.1| PREDICTED: chloroplastic group IIA intron sp...   526   e-147
ref|XP_004232267.1| PREDICTED: chloroplastic group IIA intron sp...   524   e-146
ref|XP_002517407.1| conserved hypothetical protein [Ricinus comm...   523   e-146
ref|XP_006338519.1| PREDICTED: chloroplastic group IIA intron sp...   519   e-144
ref|XP_006338518.1| PREDICTED: chloroplastic group IIA intron sp...   519   e-144
ref|XP_004164655.1| PREDICTED: LOW QUALITY PROTEIN: chloroplasti...   517   e-144

>emb|CBI34982.3| unnamed protein product [Vitis vinifera]
          Length = 1028

 Score =  569 bits (1466), Expect = e-159
 Identities = 278/387 (71%), Positives = 329/387 (85%)
 Frame = -2

Query: 1163 LSLVNGVGSPSRVRFQLPGEAQLAEEADRLLDGLGPRFTDWWGYDPIPVDADLLSAAVPG 984
            LSL+ GVG P+RVRFQLPGEAQL EEADRLLDGLGPRFTDWWGYDP+P+DADLL A VPG
Sbjct: 330  LSLIQGVGYPTRVRFQLPGEAQLEEEADRLLDGLGPRFTDWWGYDPLPIDADLLPAVVPG 389

Query: 983  YRRPFRLLPYGVKPKLTDDEMTTLRRLSRPLPTHFALGRNKNLQGLAASMVKLWEKCEIA 804
            YRRPFRLLPYG+KPKLT+DEMT LRRL RPLP HFALGRN+ LQGLAASM+KLWEKCEIA
Sbjct: 390  YRRPFRLLPYGLKPKLTNDEMTVLRRLGRPLPCHFALGRNRKLQGLAASMIKLWEKCEIA 449

Query: 803  KVAVKRGVQNTNSEMMADELKRLTGGTLISRDREFIAFYRGKDFLPPAVSTAIEERRKHS 624
            K+AVKRGVQNTNSEMMA+ELK LTGGTL+SRDREFI FYRGKDFLPPAVS+AIE RRK+ 
Sbjct: 450  KIAVKRGVQNTNSEMMAEELKNLTGGTLLSRDREFIVFYRGKDFLPPAVSSAIEARRKYG 509

Query: 623  VHREKHYTDQTPSIATKSELELRTNEPASVDELQETNDQNKRKLVLEQRKVRSKDLAMKR 444
            +HR K   D         E EL T+E AS  +   T+DQ K   + ++R +RS +  ++R
Sbjct: 510  IHRGKQKIDHHRLAINAEESELGTSEHASDKDCDGTDDQ-KTNSLSKRRMLRSAEAVVER 568

Query: 443  INTKLSMALERKAKAERILAELEKVAEPQKPEIDREGISEEERYMLKKVGLAMKPYVPMG 264
             N KLSMALE+K +AE++LAELE+   PQ+PEID+EGI+EEERYML+KVGL MKP++ +G
Sbjct: 569  TNIKLSMALEKKERAEKLLAELEEAQIPQQPEIDKEGITEEERYMLRKVGLRMKPFLLLG 628

Query: 263  RRGVFDGTVENMHLHWKYRELVKLISSDRCIENVHAAARRLEAESGGILVAVERVNRAYA 84
            RRG+FDGTVENMHLHWKYRELVK+IS+ R IE++H  AR LEAESGGILVAVERV++ YA
Sbjct: 629  RRGIFDGTVENMHLHWKYRELVKIISNGRSIEDIHGVARTLEAESGGILVAVERVSKGYA 688

Query: 83   IIVFRGKNYERPVNLRPRTLLNKKQAM 3
            II++RGKNY+RP +LRP+TLLNK++A+
Sbjct: 689  IIMYRGKNYKRPASLRPQTLLNKREAL 715



 Score = 62.4 bits (150), Expect = 4e-07
 Identities = 39/134 (29%), Positives = 66/134 (49%)
 Frame = -2

Query: 419 LERKAKAERILAELEKVAEPQKPEIDREGISEEERYMLKKVGLAMKPYVPMGRRGVFDGT 240
           L ++ K E+ L   E    P   E+    + EEE   LK +G+ ++  + +G+ G+ +G 
Sbjct: 160 LRKEVKREKKLVRKEDERAPTLAELT---LPEEELRRLKGIGIQIRKKLKVGKAGITEGI 216

Query: 239 VENMHLHWKYRELVKLISSDRCIENVHAAARRLEAESGGILVAVERVNRAYAIIVFRGKN 60
           V  +H  W+  E+VK+   D C  N+      LE ++GG+++          II++RG N
Sbjct: 217 VNGIHERWRRAEVVKIRCEDICKLNMKRTHDILERKTGGLVI----WRSGSYIILYRGAN 272

Query: 59  YERPVNLRPRTLLN 18
           Y+ P  L    L N
Sbjct: 273 YKYPYFLSDNNLPN 286


>ref|XP_002275511.1| PREDICTED: chloroplastic group IIA intron splicing facilitator CRS1,
            chloroplastic-like [Vitis vinifera]
          Length = 1044

 Score =  569 bits (1466), Expect = e-159
 Identities = 278/387 (71%), Positives = 329/387 (85%)
 Frame = -2

Query: 1163 LSLVNGVGSPSRVRFQLPGEAQLAEEADRLLDGLGPRFTDWWGYDPIPVDADLLSAAVPG 984
            LSL+ GVG P+RVRFQLPGEAQL EEADRLLDGLGPRFTDWWGYDP+P+DADLL A VPG
Sbjct: 330  LSLIQGVGYPTRVRFQLPGEAQLEEEADRLLDGLGPRFTDWWGYDPLPIDADLLPAVVPG 389

Query: 983  YRRPFRLLPYGVKPKLTDDEMTTLRRLSRPLPTHFALGRNKNLQGLAASMVKLWEKCEIA 804
            YRRPFRLLPYG+KPKLT+DEMT LRRL RPLP HFALGRN+ LQGLAASM+KLWEKCEIA
Sbjct: 390  YRRPFRLLPYGLKPKLTNDEMTVLRRLGRPLPCHFALGRNRKLQGLAASMIKLWEKCEIA 449

Query: 803  KVAVKRGVQNTNSEMMADELKRLTGGTLISRDREFIAFYRGKDFLPPAVSTAIEERRKHS 624
            K+AVKRGVQNTNSEMMA+ELK LTGGTL+SRDREFI FYRGKDFLPPAVS+AIE RRK+ 
Sbjct: 450  KIAVKRGVQNTNSEMMAEELKNLTGGTLLSRDREFIVFYRGKDFLPPAVSSAIEARRKYG 509

Query: 623  VHREKHYTDQTPSIATKSELELRTNEPASVDELQETNDQNKRKLVLEQRKVRSKDLAMKR 444
            +HR K   D         E EL T+E AS  +   T+DQ K   + ++R +RS +  ++R
Sbjct: 510  IHRGKQKIDHHRLAINAEESELGTSEHASDKDCDGTDDQ-KTNSLSKRRMLRSAEAVVER 568

Query: 443  INTKLSMALERKAKAERILAELEKVAEPQKPEIDREGISEEERYMLKKVGLAMKPYVPMG 264
             N KLSMALE+K +AE++LAELE+   PQ+PEID+EGI+EEERYML+KVGL MKP++ +G
Sbjct: 569  TNIKLSMALEKKERAEKLLAELEEAQIPQQPEIDKEGITEEERYMLRKVGLRMKPFLLLG 628

Query: 263  RRGVFDGTVENMHLHWKYRELVKLISSDRCIENVHAAARRLEAESGGILVAVERVNRAYA 84
            RRG+FDGTVENMHLHWKYRELVK+IS+ R IE++H  AR LEAESGGILVAVERV++ YA
Sbjct: 629  RRGIFDGTVENMHLHWKYRELVKIISNGRSIEDIHGVARTLEAESGGILVAVERVSKGYA 688

Query: 83   IIVFRGKNYERPVNLRPRTLLNKKQAM 3
            II++RGKNY+RP +LRP+TLLNK++A+
Sbjct: 689  IIMYRGKNYKRPASLRPQTLLNKREAL 715



 Score = 62.4 bits (150), Expect = 4e-07
 Identities = 39/134 (29%), Positives = 66/134 (49%)
 Frame = -2

Query: 419 LERKAKAERILAELEKVAEPQKPEIDREGISEEERYMLKKVGLAMKPYVPMGRRGVFDGT 240
           L ++ K E+ L   E    P   E+    + EEE   LK +G+ ++  + +G+ G+ +G 
Sbjct: 160 LRKEVKREKKLVRKEDERAPTLAELT---LPEEELRRLKGIGIQIRKKLKVGKAGITEGI 216

Query: 239 VENMHLHWKYRELVKLISSDRCIENVHAAARRLEAESGGILVAVERVNRAYAIIVFRGKN 60
           V  +H  W+  E+VK+   D C  N+      LE ++GG+++          II++RG N
Sbjct: 217 VNGIHERWRRAEVVKIRCEDICKLNMKRTHDILERKTGGLVI----WRSGSYIILYRGAN 272

Query: 59  YERPVNLRPRTLLN 18
           Y+ P  L    L N
Sbjct: 273 YKYPYFLSDNNLPN 286


>ref|XP_007217083.1| hypothetical protein PRUPE_ppa000515mg [Prunus persica]
            gi|462413233|gb|EMJ18282.1| hypothetical protein
            PRUPE_ppa000515mg [Prunus persica]
          Length = 1117

 Score =  559 bits (1441), Expect = e-157
 Identities = 279/408 (68%), Positives = 340/408 (83%), Gaps = 3/408 (0%)
 Frame = -2

Query: 1217 DELSSEFSMV---NRVDSRKDLSLVNGVGSPSRVRFQLPGEAQLAEEADRLLDGLGPRFT 1047
            +E+S+E +     +  + R    LV GVG   RVRFQLPGEAQL EEAD +L+GLGPRFT
Sbjct: 283  NEISNEVNSAIIPSTTNERAQPMLVKGVGLQDRVRFQLPGEAQLTEEADHMLEGLGPRFT 342

Query: 1046 DWWGYDPIPVDADLLSAAVPGYRRPFRLLPYGVKPKLTDDEMTTLRRLSRPLPTHFALGR 867
            DWWGY+P+PVDADLL A VPGYR+PFRLLPYG+KPKLTDDEMTT+RRL RPLP HFALGR
Sbjct: 343  DWWGYEPLPVDADLLPAIVPGYRKPFRLLPYGLKPKLTDDEMTTIRRLGRPLPCHFALGR 402

Query: 866  NKNLQGLAASMVKLWEKCEIAKVAVKRGVQNTNSEMMADELKRLTGGTLISRDREFIAFY 687
            N+NLQGLA+S+VKLWEKCEIAK+AVKRGVQNTN+E+MA+ELKRLTGGTL++RDREFI  Y
Sbjct: 403  NRNLQGLASSIVKLWEKCEIAKIAVKRGVQNTNTEIMAEELKRLTGGTLLARDREFIVLY 462

Query: 686  RGKDFLPPAVSTAIEERRKHSVHREKHYTDQTPSIATKSELELRTNEPASVDELQETNDQ 507
            RGKDFLPPAVS+AIEERRK+++H EK   +   S+ T+ ELE RT EP +  E   TND 
Sbjct: 463  RGKDFLPPAVSSAIEERRKYAIHAEKQIAEHGTSVTTRQELEPRT-EPENKHEW--TND- 518

Query: 506  NKRKLVLEQRKVRSKDLAMKRINTKLSMALERKAKAERILAELEKVAEPQKPEIDREGIS 327
            +K  L   +RK++S ++ + R + KLSMALE+KAKAE++LAELE  A PQ+PEID+EGI+
Sbjct: 519  HKMGLPSAKRKLKSAEVVVNRTSIKLSMALEKKAKAEKLLAELENAAIPQQPEIDKEGIT 578

Query: 326  EEERYMLKKVGLAMKPYVPMGRRGVFDGTVENMHLHWKYRELVKLISSDRCIENVHAAAR 147
            +EERYML+KVGL MKP++ MGRRGVFDGT+ENMHLHWKYRELVK+I +++ IE V   A+
Sbjct: 579  KEERYMLRKVGLRMKPFLLMGRRGVFDGTIENMHLHWKYRELVKIICNEKSIEAVQQVAQ 638

Query: 146  RLEAESGGILVAVERVNRAYAIIVFRGKNYERPVNLRPRTLLNKKQAM 3
             LEAESGGILVAVERV++ YAIIV+RGKNY RP +LRP+TLLNK++AM
Sbjct: 639  TLEAESGGILVAVERVSKGYAIIVYRGKNYSRPASLRPQTLLNKREAM 686



 Score = 63.9 bits (154), Expect = 1e-07
 Identities = 37/132 (28%), Positives = 70/132 (53%), Gaps = 2/132 (1%)
 Frame = -2

Query: 419 LERKAKAERILAELEKVAEPQK--PEIDREGISEEERYMLKKVGLAMKPYVPMGRRGVFD 246
           L R+ K ++   ELEK  + ++  P +    + + E   L  VG+ ++  + +G+ G+ +
Sbjct: 135 LRREVKKQK---ELEKTGKKEERVPTLAELSLGKGELRRLTTVGIGLRKKLKIGKAGITE 191

Query: 245 GTVENMHLHWKYRELVKLISSDRCIENVHAAARRLEAESGGILVAVERVNRAYAIIVFRG 66
           G V  +H +W+  E+VK++  D C  N+      LE ++GG++V          I+++RG
Sbjct: 192 GIVNGIHENWRRSEVVKIVCEDLCRMNMKRTHDMLERKTGGLVV----WRSGSKIVLYRG 247

Query: 65  KNYERPVNLRPR 30
            NY+ P  LR +
Sbjct: 248 VNYKYPYFLRDK 259


>ref|XP_006849108.1| hypothetical protein AMTR_s00028p00245370 [Amborella trichopoda]
            gi|548852581|gb|ERN10689.1| hypothetical protein
            AMTR_s00028p00245370 [Amborella trichopoda]
          Length = 1042

 Score =  543 bits (1399), Expect = e-152
 Identities = 272/388 (70%), Positives = 326/388 (84%), Gaps = 2/388 (0%)
 Frame = -2

Query: 1160 SLVNGVGSPSRVRFQLPGEAQLAEEADRLLDGLGPRFTDWWGYDPIPVDADLLSAAVPGY 981
            S+V GVGSP++VRFQLPGE QL +EADRLLDGLGPRFTDWWGY P+PVDADLL A V GY
Sbjct: 309  SIVLGVGSPNKVRFQLPGERQLDKEADRLLDGLGPRFTDWWGYGPLPVDADLLPATVSGY 368

Query: 980  RRPFRLLPYGVKPKLTDDEMTTLRRLSRPLPTHFALGRNKNLQGLAASMVKLWEKCEIAK 801
            R+PFRLLPYGVKPKLTD EMTTLRRL RPLP HFALGRN+NLQGLA S+V+LWEKCEIAK
Sbjct: 369  RKPFRLLPYGVKPKLTDSEMTTLRRLGRPLPCHFALGRNRNLQGLATSIVRLWEKCEIAK 428

Query: 800  VAVKRGVQNTNSEMMADELKRLTGGTLISRDREFIAFYRGKDFLPPAVSTAIEERRKHSV 621
            +AVKRGVQNTNSE+MA+ELKRLTGGTL+SRDREFI FYRGKDFLPPAVS+AIEERR   V
Sbjct: 429  IAVKRGVQNTNSELMAEELKRLTGGTLLSRDREFIVFYRGKDFLPPAVSSAIEERRTVDV 488

Query: 620  HREKHYTDQTPSIATKSEL--ELRTNEPASVDELQETNDQNKRKLVLEQRKVRSKDLAMK 447
             R++   ++   +++++ L  ++R  +  S  ELQ+ N+Q++ KL  +Q K    ++AMK
Sbjct: 489  LRKQLKGNRNLDLSSQASLGYDVRLVKTTSDAELQDLNNQDEEKLSKDQLKPMKVNVAMK 548

Query: 446  RINTKLSMALERKAKAERILAELEKVAEPQKPEIDREGISEEERYMLKKVGLAMKPYVPM 267
            R++ KLS ALE+K  AER LAELE  AE  KP+ID+EGI+EEERYML+KVGL MK ++ +
Sbjct: 549  RLDWKLSEALEKKQMAERKLAELESKAELSKPDIDKEGITEEERYMLRKVGLRMKAFLLL 608

Query: 266  GRRGVFDGTVENMHLHWKYRELVKLISSDRCIENVHAAARRLEAESGGILVAVERVNRAY 87
            GRRGVFDGT+ENMHLHWKYREL+K+IS DR I  VH AAR LEAESGGILV+VE VN+ +
Sbjct: 609  GRRGVFDGTIENMHLHWKYRELIKIISKDRSIAEVHHAARTLEAESGGILVSVETVNKGH 668

Query: 86   AIIVFRGKNYERPVNLRPRTLLNKKQAM 3
            AIIV+RGKNY+RP NLRP+ LLNK++AM
Sbjct: 669  AIIVYRGKNYQRPDNLRPQNLLNKREAM 696


>gb|EXC45069.1| Chloroplastic group IIA intron splicing facilitator CRS1 [Morus
            notabilis]
          Length = 966

 Score =  543 bits (1398), Expect = e-152
 Identities = 271/386 (70%), Positives = 324/386 (83%)
 Frame = -2

Query: 1160 SLVNGVGSPSRVRFQLPGEAQLAEEADRLLDGLGPRFTDWWGYDPIPVDADLLSAAVPGY 981
            SL+ GVG P+RVRFQLPGEAQLAEEADRLLDGLGPRFTDWWGYDP PVDADLL   V GY
Sbjct: 306  SLIQGVGLPNRVRFQLPGEAQLAEEADRLLDGLGPRFTDWWGYDPQPVDADLLRPIVHGY 365

Query: 980  RRPFRLLPYGVKPKLTDDEMTTLRRLSRPLPTHFALGRNKNLQGLAASMVKLWEKCEIAK 801
            RRPFRLLPYGV PKLTDDEMTTLRRL+RPLP HFALGRN+NLQGLA+S+VKLWEKCE+AK
Sbjct: 366  RRPFRLLPYGVLPKLTDDEMTTLRRLARPLPCHFALGRNRNLQGLASSVVKLWEKCEVAK 425

Query: 800  VAVKRGVQNTNSEMMADELKRLTGGTLISRDREFIAFYRGKDFLPPAVSTAIEERRKHSV 621
            +A+KRGVQNTNSEMMA+ELK LTGGTL++RDREFI  YRGKDFLP AVS+AIEERRK+ +
Sbjct: 426  IAIKRGVQNTNSEMMAEELKSLTGGTLLARDREFIVLYRGKDFLPSAVSSAIEERRKYVI 485

Query: 620  HREKHYTDQTPSIATKSELELRTNEPASVDELQETNDQNKRKLVLEQRKVRSKDLAMKRI 441
              +K  T+   S+  K+E +   +      EL+E N  +K++L  EQRK    + ++K  
Sbjct: 486  QAKKLKTEHQTSV--KTEQDQLGSVVCGASELREING-HKKRLPSEQRKPSVAETSVKGT 542

Query: 440  NTKLSMALERKAKAERILAELEKVAEPQKPEIDREGISEEERYMLKKVGLAMKPYVPMGR 261
            + KLSMALE+KAKAE++LAELEK    Q+PEID+EGI++EERYML+K+GL MKP++ +GR
Sbjct: 543  SIKLSMALEKKAKAEQLLAELEKAESRQQPEIDKEGITKEERYMLRKIGLRMKPFLLLGR 602

Query: 260  RGVFDGTVENMHLHWKYRELVKLISSDRCIENVHAAARRLEAESGGILVAVERVNRAYAI 81
            RGVFDGT+ENMHLHWKYRELVK+IS+++ IE VH  A+ LEAESGGILVAVER ++ YAI
Sbjct: 603  RGVFDGTIENMHLHWKYRELVKVISNEKSIEAVHQVAQTLEAESGGILVAVERESKGYAI 662

Query: 80   IVFRGKNYERPVNLRPRTLLNKKQAM 3
            IV+RGKNYERP +LRP+TLL K+ AM
Sbjct: 663  IVYRGKNYERPASLRPQTLLTKRAAM 688


>ref|XP_007031356.1| CRM family member 2, putative isoform 2 [Theobroma cacao]
            gi|508710385|gb|EOY02282.1| CRM family member 2, putative
            isoform 2 [Theobroma cacao]
          Length = 1045

 Score =  536 bits (1382), Expect = e-150
 Identities = 265/402 (65%), Positives = 325/402 (80%)
 Frame = -2

Query: 1208 SSEFSMVNRVDSRKDLSLVNGVGSPSRVRFQLPGEAQLAEEADRLLDGLGPRFTDWWGYD 1029
            S++ ++ N  +      +V GVGSPSRVRFQLPGEA+L EEA+ LLDGLGPRFTDWWGY+
Sbjct: 295  SAKTAIPNATNKMTKPMIVQGVGSPSRVRFQLPGEAELVEEANHLLDGLGPRFTDWWGYE 354

Query: 1028 PIPVDADLLSAAVPGYRRPFRLLPYGVKPKLTDDEMTTLRRLSRPLPTHFALGRNKNLQG 849
            P+PVD DLL A +PGYRRPFRLLPYGVKP LT+DEMTTLRRL RPLP HF LGRN+ LQG
Sbjct: 355  PLPVDGDLLPAIIPGYRRPFRLLPYGVKPILTNDEMTTLRRLGRPLPCHFVLGRNRKLQG 414

Query: 848  LAASMVKLWEKCEIAKVAVKRGVQNTNSEMMADELKRLTGGTLISRDREFIAFYRGKDFL 669
            LAAS+VK WEKCEIAKVAVKRGVQNTNSE+MA+ELK LTGGTL+SRD++FI  YRGKDFL
Sbjct: 415  LAASIVKHWEKCEIAKVAVKRGVQNTNSELMAEELKWLTGGTLLSRDKDFIVLYRGKDFL 474

Query: 668  PPAVSTAIEERRKHSVHREKHYTDQTPSIATKSELELRTNEPASVDELQETNDQNKRKLV 489
            P AVS+AIEERR+H +H EK   + + S  T  E+ +   +  S  ++    DQ +    
Sbjct: 475  PSAVSSAIEERRRHVIHVEKQGAECSKSKKTAQEVIVEDTKSGSESKINSAKDQ-RSNFF 533

Query: 488  LEQRKVRSKDLAMKRINTKLSMALERKAKAERILAELEKVAEPQKPEIDREGISEEERYM 309
             + + ++S + A+++ + KLSMALE+KAKAE++LAELE+   PQ+ EID+EGI++EERYM
Sbjct: 534  GDPKNMKSAEAAIRKTDVKLSMALEKKAKAEKLLAELEQAEIPQQSEIDKEGITQEERYM 593

Query: 308  LKKVGLAMKPYVPMGRRGVFDGTVENMHLHWKYRELVKLISSDRCIENVHAAARRLEAES 129
            L+KVGL MKP++ +GRRGVFDGTVENMHLHWKYRELVK+IS +  +E VH  AR LEAES
Sbjct: 594  LRKVGLRMKPFLLLGRRGVFDGTVENMHLHWKYRELVKIISKETNVEAVHQLARMLEAES 653

Query: 128  GGILVAVERVNRAYAIIVFRGKNYERPVNLRPRTLLNKKQAM 3
            GGILVAVERV++ YAIIV+RGKNYERP +LRP+TLL K+QAM
Sbjct: 654  GGILVAVERVSKGYAIIVYRGKNYERPTSLRPQTLLTKRQAM 695



 Score = 62.0 bits (149), Expect = 5e-07
 Identities = 38/126 (30%), Positives = 61/126 (48%)
 Frame = -2

Query: 425 MALERKAKAERILAELEKVAEPQKPEIDREGISEEERYMLKKVGLAMKPYVPMGRRGVFD 246
           MA  R+ K ER      K  +   P +    +S  E   L+ VG+  K  + +G+ G+ +
Sbjct: 135 MARFREMKRERRKVGRVKEEDRAVPSLAELKLSAAELRRLRTVGIGEKRKLKLGKAGITE 194

Query: 245 GTVENMHLHWKYRELVKLISSDRCIENVHAAARRLEAESGGILVAVERVNRAYAIIVFRG 66
           G V  +H  W+  E+VK++  D C  N+      LE ++GG++V          II++RG
Sbjct: 195 GIVNGIHERWRRSEVVKIVCEDICKMNMKRTHEVLERKTGGLVV----WRSGSKIILYRG 250

Query: 65  KNYERP 48
            NY  P
Sbjct: 251 ANYRYP 256


>ref|XP_007031355.1| CRM family member 2, putative isoform 1 [Theobroma cacao]
            gi|508710384|gb|EOY02281.1| CRM family member 2, putative
            isoform 1 [Theobroma cacao]
          Length = 1087

 Score =  536 bits (1382), Expect = e-150
 Identities = 265/402 (65%), Positives = 325/402 (80%)
 Frame = -2

Query: 1208 SSEFSMVNRVDSRKDLSLVNGVGSPSRVRFQLPGEAQLAEEADRLLDGLGPRFTDWWGYD 1029
            S++ ++ N  +      +V GVGSPSRVRFQLPGEA+L EEA+ LLDGLGPRFTDWWGY+
Sbjct: 337  SAKTAIPNATNKMTKPMIVQGVGSPSRVRFQLPGEAELVEEANHLLDGLGPRFTDWWGYE 396

Query: 1028 PIPVDADLLSAAVPGYRRPFRLLPYGVKPKLTDDEMTTLRRLSRPLPTHFALGRNKNLQG 849
            P+PVD DLL A +PGYRRPFRLLPYGVKP LT+DEMTTLRRL RPLP HF LGRN+ LQG
Sbjct: 397  PLPVDGDLLPAIIPGYRRPFRLLPYGVKPILTNDEMTTLRRLGRPLPCHFVLGRNRKLQG 456

Query: 848  LAASMVKLWEKCEIAKVAVKRGVQNTNSEMMADELKRLTGGTLISRDREFIAFYRGKDFL 669
            LAAS+VK WEKCEIAKVAVKRGVQNTNSE+MA+ELK LTGGTL+SRD++FI  YRGKDFL
Sbjct: 457  LAASIVKHWEKCEIAKVAVKRGVQNTNSELMAEELKWLTGGTLLSRDKDFIVLYRGKDFL 516

Query: 668  PPAVSTAIEERRKHSVHREKHYTDQTPSIATKSELELRTNEPASVDELQETNDQNKRKLV 489
            P AVS+AIEERR+H +H EK   + + S  T  E+ +   +  S  ++    DQ +    
Sbjct: 517  PSAVSSAIEERRRHVIHVEKQGAECSKSKKTAQEVIVEDTKSGSESKINSAKDQ-RSNFF 575

Query: 488  LEQRKVRSKDLAMKRINTKLSMALERKAKAERILAELEKVAEPQKPEIDREGISEEERYM 309
             + + ++S + A+++ + KLSMALE+KAKAE++LAELE+   PQ+ EID+EGI++EERYM
Sbjct: 576  GDPKNMKSAEAAIRKTDVKLSMALEKKAKAEKLLAELEQAEIPQQSEIDKEGITQEERYM 635

Query: 308  LKKVGLAMKPYVPMGRRGVFDGTVENMHLHWKYRELVKLISSDRCIENVHAAARRLEAES 129
            L+KVGL MKP++ +GRRGVFDGTVENMHLHWKYRELVK+IS +  +E VH  AR LEAES
Sbjct: 636  LRKVGLRMKPFLLLGRRGVFDGTVENMHLHWKYRELVKIISKETNVEAVHQLARMLEAES 695

Query: 128  GGILVAVERVNRAYAIIVFRGKNYERPVNLRPRTLLNKKQAM 3
            GGILVAVERV++ YAIIV+RGKNYERP +LRP+TLL K+QAM
Sbjct: 696  GGILVAVERVSKGYAIIVYRGKNYERPTSLRPQTLLTKRQAM 737


>ref|XP_004297960.1| PREDICTED: uncharacterized protein LOC101297928 [Fragaria vesca
            subsp. vesca]
          Length = 1169

 Score =  535 bits (1377), Expect = e-149
 Identities = 263/392 (67%), Positives = 318/392 (81%)
 Frame = -2

Query: 1178 DSRKDLSLVNGVGSPSRVRFQLPGEAQLAEEADRLLDGLGPRFTDWWGYDPIPVDADLLS 999
            D +   +L+ GVG  +R RFQLPGEA+LAEEADR+L+GLGPRF DWWGY+P+PVD DLL 
Sbjct: 293  DEKTQPALIQGVGLANRFRFQLPGEAELAEEADRMLEGLGPRFNDWWGYEPLPVDGDLLP 352

Query: 998  AAVPGYRRPFRLLPYGVKPKLTDDEMTTLRRLSRPLPTHFALGRNKNLQGLAASMVKLWE 819
            A VPGYR+PFRLLPYG++PKLTDDEMTT+RRL+RPLPTHFALGRN+ LQGLA S+VKLWE
Sbjct: 353  AVVPGYRKPFRLLPYGLQPKLTDDEMTTIRRLARPLPTHFALGRNRKLQGLATSIVKLWE 412

Query: 818  KCEIAKVAVKRGVQNTNSEMMADELKRLTGGTLISRDREFIAFYRGKDFLPPAVSTAIEE 639
            KCEIAKVAVKRGVQNTN E+MA+ELKRLTGGTLI+RD+EFI  YRGKDFLPPAVS+AIEE
Sbjct: 413  KCEIAKVAVKRGVQNTNCELMAEELKRLTGGTLIARDKEFIVLYRGKDFLPPAVSSAIEE 472

Query: 638  RRKHSVHREKHYTDQTPSIATKSELELRTNEPASVDELQETNDQNKRKLVLEQRKVRSKD 459
            RRK  ++ +        S  T  + E RT          ET D     L  E+RK++S +
Sbjct: 473  RRKAVMYADNRSRKLRISATTAQDHESRTE--------LETKDDLTGGLPSEKRKLKSTE 524

Query: 458  LAMKRINTKLSMALERKAKAERILAELEKVAEPQKPEIDREGISEEERYMLKKVGLAMKP 279
             A  R + KLSMALE++ KAE++LAELEK   PQ+PEID+EGI+EEERYML+KVGL MKP
Sbjct: 525  AAASRASIKLSMALEKREKAEKLLAELEKAESPQQPEIDKEGITEEERYMLRKVGLKMKP 584

Query: 278  YVPMGRRGVFDGTVENMHLHWKYRELVKLISSDRCIENVHAAARRLEAESGGILVAVERV 99
            ++ MGRRGVFDGT+ENMHLHWKYRELVK+I +++ IE+ H  A+ LE+ESGGILVAVERV
Sbjct: 585  FLLMGRRGVFDGTIENMHLHWKYRELVKIICNEKSIESAHQVAQTLESESGGILVAVERV 644

Query: 98   NRAYAIIVFRGKNYERPVNLRPRTLLNKKQAM 3
            ++ YAIIV+RGKNY RP NLRP+TLL K++A+
Sbjct: 645  SKGYAIIVYRGKNYIRPANLRPQTLLTKREAL 676



 Score = 65.5 bits (158), Expect = 5e-08
 Identities = 40/133 (30%), Positives = 69/133 (51%), Gaps = 5/133 (3%)
 Frame = -2

Query: 419 LERKAKAERILAELEKVAEPQK-----PEIDREGISEEERYMLKKVGLAMKPYVPMGRRG 255
           + R+ K    + E+E+  E +K     P +    +S  E   L+ VG+ +K  V +G+ G
Sbjct: 130 MRRELKRLEEVEEMERKKEGKKKEEKVPTLAEMSLSTAELRRLRTVGIELKKKVRVGKAG 189

Query: 254 VFDGTVENMHLHWKYRELVKLISSDRCIENVHAAARRLEAESGGILVAVERVNRAYAIIV 75
           + +G V  +H +W+  E+VKL+  D C  N+      LE ++GG++V          II+
Sbjct: 190 ITEGIVNGIHENWRRSEVVKLVCEDLCRLNMKRTHDLLERKTGGLVV----WRSGAKIIL 245

Query: 74  FRGKNYERPVNLR 36
           +RG NY+ P  L+
Sbjct: 246 YRGVNYKYPYFLK 258


>ref|XP_006482481.1| PREDICTED: chloroplastic group IIA intron splicing facilitator CRS1,
            chloroplastic-like isoform X6 [Citrus sinensis]
          Length = 1031

 Score =  530 bits (1365), Expect = e-148
 Identities = 272/390 (69%), Positives = 319/390 (81%), Gaps = 4/390 (1%)
 Frame = -2

Query: 1160 SLVNGVGSPSRVRFQLPGEAQLAEEADRLLDGLGPRFTDWWGYDPIPVDADLLSAAVPGY 981
            +L++ VGSP ++R+QLPGEA+L EEADRLLDGLGPRFTDWWGYDP PVDADLLSA VPGY
Sbjct: 325  TLIHSVGSPDKLRYQLPGEAELVEEADRLLDGLGPRFTDWWGYDPQPVDADLLSATVPGY 384

Query: 980  RRPFRLLPYGVKPKLTDDEMTTLRRLSRPLPTHFALGRNKNLQGLAASMVKLWEKCEIAK 801
            RRPFRLLPYGV+PKLT+DEMTTLRRL RPLP HFALGRN+NLQGLAA++VKLWEKCEIAK
Sbjct: 385  RRPFRLLPYGVQPKLTNDEMTTLRRLGRPLPCHFALGRNRNLQGLAAAIVKLWEKCEIAK 444

Query: 800  VAVKRGVQNTNSEMMADELKRLTGGTLISRDREFIAFYRGKDFLPPAVSTAIEERRKHSV 621
            +AVKRG QNTNSEMMA ELKRLTGGTL+SRDREFI FYRGKDFLPPA S AIEERRKH  
Sbjct: 445  IAVKRGAQNTNSEMMAQELKRLTGGTLLSRDREFIVFYRGKDFLPPAASCAIEERRKH-- 502

Query: 620  HREKHYTDQTPSIATKSELELRTNEPASVDELQE----TNDQNKRKLVLEQRKVRSKDLA 453
                   + + S  +K E EL      S D  Q+    TNDQ K  +  EQ++ RS ++A
Sbjct: 503  -------EFSTSNDSKEEPELGNRHDNSGDNTQDEFGCTNDQ-KSTMHSEQKERRSAEVA 554

Query: 452  MKRINTKLSMALERKAKAERILAELEKVAEPQKPEIDREGISEEERYMLKKVGLAMKPYV 273
            ++R N +LS ALE+KA+AE++LAELE+   P++ E+D+EGI+EEERYML+KVGL MK ++
Sbjct: 555  IRRTNIRLSRALEKKAEAEKLLAELEE-ETPEQYEVDKEGITEEERYMLRKVGLRMKAFL 613

Query: 272  PMGRRGVFDGTVENMHLHWKYRELVKLISSDRCIENVHAAARRLEAESGGILVAVERVNR 93
             MGRRGVFDGTVENMHLHWK+RELVK+IS  R IE     AR LE ESGGILVAVERVN+
Sbjct: 614  LMGRRGVFDGTVENMHLHWKHRELVKIISKQRKIEAALQEARTLEVESGGILVAVERVNK 673

Query: 92   AYAIIVFRGKNYERPVNLRPRTLLNKKQAM 3
             YAII++RGKNYERP  LRP+TLL K++AM
Sbjct: 674  GYAIILYRGKNYERPACLRPKTLLTKREAM 703



 Score = 62.0 bits (149), Expect = 5e-07
 Identities = 34/126 (26%), Positives = 69/126 (54%), Gaps = 2/126 (1%)
 Frame = -2

Query: 419 LERKAKAERILAELEKVAEPQK--PEIDREGISEEERYMLKKVGLAMKPYVPMGRRGVFD 246
           L ++   ++ LA+  K+ E +K  P +    +S +E   L+ +G+ ++  + +G+ G+ +
Sbjct: 149 LNKEVGRQKWLAKNSKMNEKEKEVPTLAELKLSGKELRRLRTLGIGLRKKLKIGKAGITE 208

Query: 245 GTVENMHLHWKYRELVKLISSDRCIENVHAAARRLEAESGGILVAVERVNRAYAIIVFRG 66
           G V  +H  W++ E+VK++  D C  N+      LE ++GG++V          II++RG
Sbjct: 209 GIVNGIHERWRHAEVVKIVCEDLCRLNMKRTHDSLERKTGGLVV----WRSGSKIILYRG 264

Query: 65  KNYERP 48
            +Y+ P
Sbjct: 265 ADYKYP 270


>ref|XP_006482480.1| PREDICTED: chloroplastic group IIA intron splicing facilitator CRS1,
            chloroplastic-like isoform X5 [Citrus sinensis]
          Length = 1045

 Score =  530 bits (1365), Expect = e-148
 Identities = 272/390 (69%), Positives = 319/390 (81%), Gaps = 4/390 (1%)
 Frame = -2

Query: 1160 SLVNGVGSPSRVRFQLPGEAQLAEEADRLLDGLGPRFTDWWGYDPIPVDADLLSAAVPGY 981
            +L++ VGSP ++R+QLPGEA+L EEADRLLDGLGPRFTDWWGYDP PVDADLLSA VPGY
Sbjct: 325  TLIHSVGSPDKLRYQLPGEAELVEEADRLLDGLGPRFTDWWGYDPQPVDADLLSATVPGY 384

Query: 980  RRPFRLLPYGVKPKLTDDEMTTLRRLSRPLPTHFALGRNKNLQGLAASMVKLWEKCEIAK 801
            RRPFRLLPYGV+PKLT+DEMTTLRRL RPLP HFALGRN+NLQGLAA++VKLWEKCEIAK
Sbjct: 385  RRPFRLLPYGVQPKLTNDEMTTLRRLGRPLPCHFALGRNRNLQGLAAAIVKLWEKCEIAK 444

Query: 800  VAVKRGVQNTNSEMMADELKRLTGGTLISRDREFIAFYRGKDFLPPAVSTAIEERRKHSV 621
            +AVKRG QNTNSEMMA ELKRLTGGTL+SRDREFI FYRGKDFLPPA S AIEERRKH  
Sbjct: 445  IAVKRGAQNTNSEMMAQELKRLTGGTLLSRDREFIVFYRGKDFLPPAASCAIEERRKH-- 502

Query: 620  HREKHYTDQTPSIATKSELELRTNEPASVDELQE----TNDQNKRKLVLEQRKVRSKDLA 453
                   + + S  +K E EL      S D  Q+    TNDQ K  +  EQ++ RS ++A
Sbjct: 503  -------EFSTSNDSKEEPELGNRHDNSGDNTQDEFGCTNDQ-KSTMHSEQKERRSAEVA 554

Query: 452  MKRINTKLSMALERKAKAERILAELEKVAEPQKPEIDREGISEEERYMLKKVGLAMKPYV 273
            ++R N +LS ALE+KA+AE++LAELE+   P++ E+D+EGI+EEERYML+KVGL MK ++
Sbjct: 555  IRRTNIRLSRALEKKAEAEKLLAELEE-ETPEQYEVDKEGITEEERYMLRKVGLRMKAFL 613

Query: 272  PMGRRGVFDGTVENMHLHWKYRELVKLISSDRCIENVHAAARRLEAESGGILVAVERVNR 93
             MGRRGVFDGTVENMHLHWK+RELVK+IS  R IE     AR LE ESGGILVAVERVN+
Sbjct: 614  LMGRRGVFDGTVENMHLHWKHRELVKIISKQRKIEAALQEARTLEVESGGILVAVERVNK 673

Query: 92   AYAIIVFRGKNYERPVNLRPRTLLNKKQAM 3
             YAII++RGKNYERP  LRP+TLL K++AM
Sbjct: 674  GYAIILYRGKNYERPACLRPKTLLTKREAM 703



 Score = 62.0 bits (149), Expect = 5e-07
 Identities = 34/126 (26%), Positives = 69/126 (54%), Gaps = 2/126 (1%)
 Frame = -2

Query: 419 LERKAKAERILAELEKVAEPQK--PEIDREGISEEERYMLKKVGLAMKPYVPMGRRGVFD 246
           L ++   ++ LA+  K+ E +K  P +    +S +E   L+ +G+ ++  + +G+ G+ +
Sbjct: 149 LNKEVGRQKWLAKNSKMNEKEKEVPTLAELKLSGKELRRLRTLGIGLRKKLKIGKAGITE 208

Query: 245 GTVENMHLHWKYRELVKLISSDRCIENVHAAARRLEAESGGILVAVERVNRAYAIIVFRG 66
           G V  +H  W++ E+VK++  D C  N+      LE ++GG++V          II++RG
Sbjct: 209 GIVNGIHERWRHAEVVKIVCEDLCRLNMKRTHDSLERKTGGLVV----WRSGSKIILYRG 264

Query: 65  KNYERP 48
            +Y+ P
Sbjct: 265 ADYKYP 270


>ref|XP_006482479.1| PREDICTED: chloroplastic group IIA intron splicing facilitator CRS1,
            chloroplastic-like isoform X4 [Citrus sinensis]
          Length = 1050

 Score =  530 bits (1365), Expect = e-148
 Identities = 272/390 (69%), Positives = 319/390 (81%), Gaps = 4/390 (1%)
 Frame = -2

Query: 1160 SLVNGVGSPSRVRFQLPGEAQLAEEADRLLDGLGPRFTDWWGYDPIPVDADLLSAAVPGY 981
            +L++ VGSP ++R+QLPGEA+L EEADRLLDGLGPRFTDWWGYDP PVDADLLSA VPGY
Sbjct: 325  TLIHSVGSPDKLRYQLPGEAELVEEADRLLDGLGPRFTDWWGYDPQPVDADLLSATVPGY 384

Query: 980  RRPFRLLPYGVKPKLTDDEMTTLRRLSRPLPTHFALGRNKNLQGLAASMVKLWEKCEIAK 801
            RRPFRLLPYGV+PKLT+DEMTTLRRL RPLP HFALGRN+NLQGLAA++VKLWEKCEIAK
Sbjct: 385  RRPFRLLPYGVQPKLTNDEMTTLRRLGRPLPCHFALGRNRNLQGLAAAIVKLWEKCEIAK 444

Query: 800  VAVKRGVQNTNSEMMADELKRLTGGTLISRDREFIAFYRGKDFLPPAVSTAIEERRKHSV 621
            +AVKRG QNTNSEMMA ELKRLTGGTL+SRDREFI FYRGKDFLPPA S AIEERRKH  
Sbjct: 445  IAVKRGAQNTNSEMMAQELKRLTGGTLLSRDREFIVFYRGKDFLPPAASCAIEERRKH-- 502

Query: 620  HREKHYTDQTPSIATKSELELRTNEPASVDELQE----TNDQNKRKLVLEQRKVRSKDLA 453
                   + + S  +K E EL      S D  Q+    TNDQ K  +  EQ++ RS ++A
Sbjct: 503  -------EFSTSNDSKEEPELGNRHDNSGDNTQDEFGCTNDQ-KSTMHSEQKERRSAEVA 554

Query: 452  MKRINTKLSMALERKAKAERILAELEKVAEPQKPEIDREGISEEERYMLKKVGLAMKPYV 273
            ++R N +LS ALE+KA+AE++LAELE+   P++ E+D+EGI+EEERYML+KVGL MK ++
Sbjct: 555  IRRTNIRLSRALEKKAEAEKLLAELEE-ETPEQYEVDKEGITEEERYMLRKVGLRMKAFL 613

Query: 272  PMGRRGVFDGTVENMHLHWKYRELVKLISSDRCIENVHAAARRLEAESGGILVAVERVNR 93
             MGRRGVFDGTVENMHLHWK+RELVK+IS  R IE     AR LE ESGGILVAVERVN+
Sbjct: 614  LMGRRGVFDGTVENMHLHWKHRELVKIISKQRKIEAALQEARTLEVESGGILVAVERVNK 673

Query: 92   AYAIIVFRGKNYERPVNLRPRTLLNKKQAM 3
             YAII++RGKNYERP  LRP+TLL K++AM
Sbjct: 674  GYAIILYRGKNYERPACLRPKTLLTKREAM 703



 Score = 62.0 bits (149), Expect = 5e-07
 Identities = 34/126 (26%), Positives = 69/126 (54%), Gaps = 2/126 (1%)
 Frame = -2

Query: 419 LERKAKAERILAELEKVAEPQK--PEIDREGISEEERYMLKKVGLAMKPYVPMGRRGVFD 246
           L ++   ++ LA+  K+ E +K  P +    +S +E   L+ +G+ ++  + +G+ G+ +
Sbjct: 149 LNKEVGRQKWLAKNSKMNEKEKEVPTLAELKLSGKELRRLRTLGIGLRKKLKIGKAGITE 208

Query: 245 GTVENMHLHWKYRELVKLISSDRCIENVHAAARRLEAESGGILVAVERVNRAYAIIVFRG 66
           G V  +H  W++ E+VK++  D C  N+      LE ++GG++V          II++RG
Sbjct: 209 GIVNGIHERWRHAEVVKIVCEDLCRLNMKRTHDSLERKTGGLVV----WRSGSKIILYRG 264

Query: 65  KNYERP 48
            +Y+ P
Sbjct: 265 ADYKYP 270


>ref|XP_006482478.1| PREDICTED: chloroplastic group IIA intron splicing facilitator CRS1,
            chloroplastic-like isoform X3 [Citrus sinensis]
          Length = 1062

 Score =  530 bits (1365), Expect = e-148
 Identities = 272/390 (69%), Positives = 319/390 (81%), Gaps = 4/390 (1%)
 Frame = -2

Query: 1160 SLVNGVGSPSRVRFQLPGEAQLAEEADRLLDGLGPRFTDWWGYDPIPVDADLLSAAVPGY 981
            +L++ VGSP ++R+QLPGEA+L EEADRLLDGLGPRFTDWWGYDP PVDADLLSA VPGY
Sbjct: 325  TLIHSVGSPDKLRYQLPGEAELVEEADRLLDGLGPRFTDWWGYDPQPVDADLLSATVPGY 384

Query: 980  RRPFRLLPYGVKPKLTDDEMTTLRRLSRPLPTHFALGRNKNLQGLAASMVKLWEKCEIAK 801
            RRPFRLLPYGV+PKLT+DEMTTLRRL RPLP HFALGRN+NLQGLAA++VKLWEKCEIAK
Sbjct: 385  RRPFRLLPYGVQPKLTNDEMTTLRRLGRPLPCHFALGRNRNLQGLAAAIVKLWEKCEIAK 444

Query: 800  VAVKRGVQNTNSEMMADELKRLTGGTLISRDREFIAFYRGKDFLPPAVSTAIEERRKHSV 621
            +AVKRG QNTNSEMMA ELKRLTGGTL+SRDREFI FYRGKDFLPPA S AIEERRKH  
Sbjct: 445  IAVKRGAQNTNSEMMAQELKRLTGGTLLSRDREFIVFYRGKDFLPPAASCAIEERRKH-- 502

Query: 620  HREKHYTDQTPSIATKSELELRTNEPASVDELQE----TNDQNKRKLVLEQRKVRSKDLA 453
                   + + S  +K E EL      S D  Q+    TNDQ K  +  EQ++ RS ++A
Sbjct: 503  -------EFSTSNDSKEEPELGNRHDNSGDNTQDEFGCTNDQ-KSTMHSEQKERRSAEVA 554

Query: 452  MKRINTKLSMALERKAKAERILAELEKVAEPQKPEIDREGISEEERYMLKKVGLAMKPYV 273
            ++R N +LS ALE+KA+AE++LAELE+   P++ E+D+EGI+EEERYML+KVGL MK ++
Sbjct: 555  IRRTNIRLSRALEKKAEAEKLLAELEE-ETPEQYEVDKEGITEEERYMLRKVGLRMKAFL 613

Query: 272  PMGRRGVFDGTVENMHLHWKYRELVKLISSDRCIENVHAAARRLEAESGGILVAVERVNR 93
             MGRRGVFDGTVENMHLHWK+RELVK+IS  R IE     AR LE ESGGILVAVERVN+
Sbjct: 614  LMGRRGVFDGTVENMHLHWKHRELVKIISKQRKIEAALQEARTLEVESGGILVAVERVNK 673

Query: 92   AYAIIVFRGKNYERPVNLRPRTLLNKKQAM 3
             YAII++RGKNYERP  LRP+TLL K++AM
Sbjct: 674  GYAIILYRGKNYERPACLRPKTLLTKREAM 703



 Score = 62.0 bits (149), Expect = 5e-07
 Identities = 34/126 (26%), Positives = 69/126 (54%), Gaps = 2/126 (1%)
 Frame = -2

Query: 419 LERKAKAERILAELEKVAEPQK--PEIDREGISEEERYMLKKVGLAMKPYVPMGRRGVFD 246
           L ++   ++ LA+  K+ E +K  P +    +S +E   L+ +G+ ++  + +G+ G+ +
Sbjct: 149 LNKEVGRQKWLAKNSKMNEKEKEVPTLAELKLSGKELRRLRTLGIGLRKKLKIGKAGITE 208

Query: 245 GTVENMHLHWKYRELVKLISSDRCIENVHAAARRLEAESGGILVAVERVNRAYAIIVFRG 66
           G V  +H  W++ E+VK++  D C  N+      LE ++GG++V          II++RG
Sbjct: 209 GIVNGIHERWRHAEVVKIVCEDLCRLNMKRTHDSLERKTGGLVV----WRSGSKIILYRG 264

Query: 65  KNYERP 48
            +Y+ P
Sbjct: 265 ADYKYP 270


>ref|XP_006482476.1| PREDICTED: chloroplastic group IIA intron splicing facilitator CRS1,
            chloroplastic-like isoform X1 [Citrus sinensis]
            gi|568857850|ref|XP_006482477.1| PREDICTED: chloroplastic
            group IIA intron splicing facilitator CRS1,
            chloroplastic-like isoform X2 [Citrus sinensis]
          Length = 1076

 Score =  530 bits (1365), Expect = e-148
 Identities = 272/390 (69%), Positives = 319/390 (81%), Gaps = 4/390 (1%)
 Frame = -2

Query: 1160 SLVNGVGSPSRVRFQLPGEAQLAEEADRLLDGLGPRFTDWWGYDPIPVDADLLSAAVPGY 981
            +L++ VGSP ++R+QLPGEA+L EEADRLLDGLGPRFTDWWGYDP PVDADLLSA VPGY
Sbjct: 325  TLIHSVGSPDKLRYQLPGEAELVEEADRLLDGLGPRFTDWWGYDPQPVDADLLSATVPGY 384

Query: 980  RRPFRLLPYGVKPKLTDDEMTTLRRLSRPLPTHFALGRNKNLQGLAASMVKLWEKCEIAK 801
            RRPFRLLPYGV+PKLT+DEMTTLRRL RPLP HFALGRN+NLQGLAA++VKLWEKCEIAK
Sbjct: 385  RRPFRLLPYGVQPKLTNDEMTTLRRLGRPLPCHFALGRNRNLQGLAAAIVKLWEKCEIAK 444

Query: 800  VAVKRGVQNTNSEMMADELKRLTGGTLISRDREFIAFYRGKDFLPPAVSTAIEERRKHSV 621
            +AVKRG QNTNSEMMA ELKRLTGGTL+SRDREFI FYRGKDFLPPA S AIEERRKH  
Sbjct: 445  IAVKRGAQNTNSEMMAQELKRLTGGTLLSRDREFIVFYRGKDFLPPAASCAIEERRKH-- 502

Query: 620  HREKHYTDQTPSIATKSELELRTNEPASVDELQE----TNDQNKRKLVLEQRKVRSKDLA 453
                   + + S  +K E EL      S D  Q+    TNDQ K  +  EQ++ RS ++A
Sbjct: 503  -------EFSTSNDSKEEPELGNRHDNSGDNTQDEFGCTNDQ-KSTMHSEQKERRSAEVA 554

Query: 452  MKRINTKLSMALERKAKAERILAELEKVAEPQKPEIDREGISEEERYMLKKVGLAMKPYV 273
            ++R N +LS ALE+KA+AE++LAELE+   P++ E+D+EGI+EEERYML+KVGL MK ++
Sbjct: 555  IRRTNIRLSRALEKKAEAEKLLAELEE-ETPEQYEVDKEGITEEERYMLRKVGLRMKAFL 613

Query: 272  PMGRRGVFDGTVENMHLHWKYRELVKLISSDRCIENVHAAARRLEAESGGILVAVERVNR 93
             MGRRGVFDGTVENMHLHWK+RELVK+IS  R IE     AR LE ESGGILVAVERVN+
Sbjct: 614  LMGRRGVFDGTVENMHLHWKHRELVKIISKQRKIEAALQEARTLEVESGGILVAVERVNK 673

Query: 92   AYAIIVFRGKNYERPVNLRPRTLLNKKQAM 3
             YAII++RGKNYERP  LRP+TLL K++AM
Sbjct: 674  GYAIILYRGKNYERPACLRPKTLLTKREAM 703



 Score = 62.0 bits (149), Expect = 5e-07
 Identities = 34/126 (26%), Positives = 69/126 (54%), Gaps = 2/126 (1%)
 Frame = -2

Query: 419 LERKAKAERILAELEKVAEPQK--PEIDREGISEEERYMLKKVGLAMKPYVPMGRRGVFD 246
           L ++   ++ LA+  K+ E +K  P +    +S +E   L+ +G+ ++  + +G+ G+ +
Sbjct: 149 LNKEVGRQKWLAKNSKMNEKEKEVPTLAELKLSGKELRRLRTLGIGLRKKLKIGKAGITE 208

Query: 245 GTVENMHLHWKYRELVKLISSDRCIENVHAAARRLEAESGGILVAVERVNRAYAIIVFRG 66
           G V  +H  W++ E+VK++  D C  N+      LE ++GG++V          II++RG
Sbjct: 209 GIVNGIHERWRHAEVVKIVCEDLCRLNMKRTHDSLERKTGGLVV----WRSGSKIILYRG 264

Query: 65  KNYERP 48
            +Y+ P
Sbjct: 265 ADYKYP 270


>ref|XP_006431007.1| hypothetical protein CICLE_v10013715mg [Citrus clementina]
            gi|557533064|gb|ESR44247.1| hypothetical protein
            CICLE_v10013715mg [Citrus clementina]
          Length = 1062

 Score =  526 bits (1354), Expect = e-147
 Identities = 269/390 (68%), Positives = 318/390 (81%), Gaps = 4/390 (1%)
 Frame = -2

Query: 1160 SLVNGVGSPSRVRFQLPGEAQLAEEADRLLDGLGPRFTDWWGYDPIPVDADLLSAAVPGY 981
            +L++ VGSP ++R+QLPGEA+L EEADRLLDGLGPRFTDWWGYDP PVDADLL A VPGY
Sbjct: 325  TLIHSVGSPDKLRYQLPGEAELVEEADRLLDGLGPRFTDWWGYDPQPVDADLLPATVPGY 384

Query: 980  RRPFRLLPYGVKPKLTDDEMTTLRRLSRPLPTHFALGRNKNLQGLAASMVKLWEKCEIAK 801
            RRPFRLLPYGV+PKLT+DEMTTLRRL RPLP HFALGRN+NLQGLAA++VKLWEKCEIAK
Sbjct: 385  RRPFRLLPYGVQPKLTNDEMTTLRRLGRPLPCHFALGRNRNLQGLAAAIVKLWEKCEIAK 444

Query: 800  VAVKRGVQNTNSEMMADELKRLTGGTLISRDREFIAFYRGKDFLPPAVSTAIEERRKHSV 621
            +AVKRG QNTNSEMMA ELKRLTGGTL+SRDREFI FYRGKDFLPPA S+AIEERRKH  
Sbjct: 445  IAVKRGAQNTNSEMMAQELKRLTGGTLLSRDREFIVFYRGKDFLPPAASSAIEERRKH-- 502

Query: 620  HREKHYTDQTPSIATKSELELRTNEPASVDELQE----TNDQNKRKLVLEQRKVRSKDLA 453
                   + + S  +K E EL      S D  Q+    TNDQ    +  EQ++ RS ++A
Sbjct: 503  -------EFSTSNDSKEEPELGNRHDNSGDNTQDEFGCTNDQTS-TMHSEQKERRSAEVA 554

Query: 452  MKRINTKLSMALERKAKAERILAELEKVAEPQKPEIDREGISEEERYMLKKVGLAMKPYV 273
            ++R + +LS ALE+KA+AE++LAELE+   P++ E+D+EGI+EEERYML+KVGL MK ++
Sbjct: 555  IRRTSIRLSRALEKKAEAEKLLAELEE-ERPEQYEVDKEGITEEERYMLRKVGLRMKAFL 613

Query: 272  PMGRRGVFDGTVENMHLHWKYRELVKLISSDRCIENVHAAARRLEAESGGILVAVERVNR 93
             MGRRGVFDGTVENMHLHWK+RELVK+IS  R IE     AR LE ESGGILVAVERVN+
Sbjct: 614  LMGRRGVFDGTVENMHLHWKHRELVKIISKQRKIEAALQEARTLEVESGGILVAVERVNK 673

Query: 92   AYAIIVFRGKNYERPVNLRPRTLLNKKQAM 3
             YAII++RGKNYERP  LRP+TLL K++AM
Sbjct: 674  GYAIILYRGKNYERPACLRPKTLLTKREAM 703



 Score = 62.0 bits (149), Expect = 5e-07
 Identities = 34/126 (26%), Positives = 69/126 (54%), Gaps = 2/126 (1%)
 Frame = -2

Query: 419 LERKAKAERILAELEKVAEPQK--PEIDREGISEEERYMLKKVGLAMKPYVPMGRRGVFD 246
           L ++   ++ LA+  K+ E +K  P +    +S +E   L+ +G+ ++  + +G+ G+ +
Sbjct: 149 LNKEVGRQKWLAKNSKMNEKEKEVPTLAELKLSGKELRRLRTLGIGLRKKLKIGKAGITE 208

Query: 245 GTVENMHLHWKYRELVKLISSDRCIENVHAAARRLEAESGGILVAVERVNRAYAIIVFRG 66
           G V  +H  W++ E+VK++  D C  N+      LE ++GG++V          II++RG
Sbjct: 209 GIVNGIHERWRHAEVVKIVCEDLCRLNMKRTHDSLERKTGGLVV----WRSGSKIILYRG 264

Query: 65  KNYERP 48
            +Y+ P
Sbjct: 265 ADYKYP 270


>ref|XP_004147480.1| PREDICTED: chloroplastic group IIA intron splicing facilitator CRS1,
            chloroplastic-like [Cucumis sativus]
          Length = 1032

 Score =  526 bits (1354), Expect = e-147
 Identities = 259/386 (67%), Positives = 325/386 (84%)
 Frame = -2

Query: 1160 SLVNGVGSPSRVRFQLPGEAQLAEEADRLLDGLGPRFTDWWGYDPIPVDADLLSAAVPGY 981
            +L+ GVG+P+RVRFQLPGEA+LAE+A+ LL+GLGPRF+DWWGYDP+PVDADLL A VPGY
Sbjct: 308  TLIQGVGAPNRVRFQLPGEAELAEDAESLLEGLGPRFSDWWGYDPLPVDADLLPAIVPGY 367

Query: 980  RRPFRLLPYGVKPKLTDDEMTTLRRLSRPLPTHFALGRNKNLQGLAASMVKLWEKCEIAK 801
            R+PFRLLPYGVKPKLT+DEMT+LRRL+RPLP HFALGRN+ LQGLAAS+++LWEKCEIAK
Sbjct: 368  RKPFRLLPYGVKPKLTNDEMTSLRRLARPLPCHFALGRNRKLQGLAASIIQLWEKCEIAK 427

Query: 800  VAVKRGVQNTNSEMMADELKRLTGGTLISRDREFIAFYRGKDFLPPAVSTAIEERRKHSV 621
            +AVKRGVQNTN+++MA+EL+ LTGGTL+SRDREFI  YRGKDFLP AVS+A+E++R   +
Sbjct: 428  IAVKRGVQNTNNKLMAEELQLLTGGTLLSRDREFIVLYRGKDFLPFAVSSAMEQKRHMRL 487

Query: 620  HREKHYTDQTPSIATKSELELRTNEPASVDELQETNDQNKRKLVLEQRKVRSKDLAMKRI 441
            H  K  TD +P+  T   L+L  NE    +E Q       +K+V E+RK+ S + +M++ 
Sbjct: 488  HEMKQ-TDNSPA-TTGQGLKLEINENGPTNESQSIT--GWKKIVSERRKLMSSETSMRKT 543

Query: 440  NTKLSMALERKAKAERILAELEKVAEPQKPEIDREGISEEERYMLKKVGLAMKPYVPMGR 261
            + KLS+ALE+KAKAE  LA+LE+  + Q+PEID+EGI+ EERYMLKKVGL MKP++ +GR
Sbjct: 544  SIKLSIALEKKAKAEEFLAKLEEEEKLQQPEIDKEGITVEERYMLKKVGLRMKPFLLLGR 603

Query: 260  RGVFDGTVENMHLHWKYRELVKLISSDRCIENVHAAARRLEAESGGILVAVERVNRAYAI 81
            RGVFDGTVENMHLHWKYRELVK+I+++R  + VH  AR LEAESGGILVAVERV R++AI
Sbjct: 604  RGVFDGTVENMHLHWKYRELVKIITNERSFKTVHDVARTLEAESGGILVAVERVKRSFAI 663

Query: 80   IVFRGKNYERPVNLRPRTLLNKKQAM 3
            I+FRGKNY+RP  LRP +LLNKK+A+
Sbjct: 664  IIFRGKNYKRPSRLRPESLLNKKEAL 689



 Score = 64.7 bits (156), Expect = 8e-08
 Identities = 35/110 (31%), Positives = 59/110 (53%)
 Frame = -2

Query: 377 EKVAEPQKPEIDREGISEEERYMLKKVGLAMKPYVPMGRRGVFDGTVENMHLHWKYRELV 198
           EK  E + P +    ++EEE   L+ +G+ +K  + +G+ G+ +G V  +H +W+  E+V
Sbjct: 149 EKKREERAPSLAELSLTEEELGRLRTIGIRLKKKLNVGKAGITEGIVNTIHEYWRRSEVV 208

Query: 197 KLISSDRCIENVHAAARRLEAESGGILVAVERVNRAYAIIVFRGKNYERP 48
           K+   D C  N+      LE ++GGI+V          II++RG NY  P
Sbjct: 209 KIACEDLCRLNMKRTHDLLERKTGGIVV----WRSGSKIILYRGPNYIYP 254


>ref|XP_004232267.1| PREDICTED: chloroplastic group IIA intron splicing facilitator CRS1,
            chloroplastic-like [Solanum lycopersicum]
          Length = 1049

 Score =  524 bits (1349), Expect = e-146
 Identities = 263/392 (67%), Positives = 317/392 (80%)
 Frame = -2

Query: 1178 DSRKDLSLVNGVGSPSRVRFQLPGEAQLAEEADRLLDGLGPRFTDWWGYDPIPVDADLLS 999
            D +    ++ GVGSP RVRF+LPGEA+  EEAD+LL+GLGPRFTDWWG +P+P+DADLL 
Sbjct: 305  DRKSPPRVIQGVGSPDRVRFELPGEAEHTEEADKLLEGLGPRFTDWWGCEPLPIDADLLP 364

Query: 998  AAVPGYRRPFRLLPYGVKPKLTDDEMTTLRRLSRPLPTHFALGRNKNLQGLAASMVKLWE 819
            A VPGY+RPFRLLPYGVKPKLT+DEMTTLRRL RPLP HF LGRN+ LQGLAA++VKLWE
Sbjct: 365  AIVPGYKRPFRLLPYGVKPKLTNDEMTTLRRLGRPLPCHFVLGRNRKLQGLAAAIVKLWE 424

Query: 818  KCEIAKVAVKRGVQNTNSEMMADELKRLTGGTLISRDREFIAFYRGKDFLPPAVSTAIEE 639
            KCEIAKVAVKRGVQNTNSE+M +ELK LTGGTL+SRDREFI FYRGKDFLP AVS+AIEE
Sbjct: 425  KCEIAKVAVKRGVQNTNSELMVEELKWLTGGTLLSRDREFIVFYRGKDFLPSAVSSAIEE 484

Query: 638  RRKHSVHREKHYTDQTPSIATKSELELRTNEPASVDELQETNDQNKRKLVLEQRKVRSKD 459
            RRK     EK       S+A   E +  T E  S D     N+Q   K V E++K+ S +
Sbjct: 485  RRKQVFEEEKR-NGFNSSVANAKERKQSTTESVSDDGHAHRNNQ---KGVQEKKKLTSME 540

Query: 458  LAMKRINTKLSMALERKAKAERILAELEKVAEPQKPEIDREGISEEERYMLKKVGLAMKP 279
             A+KR   KL+ ALE+KA+AE++L ELE+   PQ+ ++D+EGI+EEER+ML+K+GL MKP
Sbjct: 541  AAIKRTADKLTTALEKKAEAEKLLLELEEDEVPQQSDMDKEGITEEERFMLRKIGLRMKP 600

Query: 278  YVPMGRRGVFDGTVENMHLHWKYRELVKLISSDRCIENVHAAARRLEAESGGILVAVERV 99
            ++ +GRRGVFDGTVENMHLHWKYRELVK+I+  + IE VH  AR LEAESGGILVAVERV
Sbjct: 601  FLLLGRRGVFDGTVENMHLHWKYRELVKVITGRKNIEEVHQIARMLEAESGGILVAVERV 660

Query: 98   NRAYAIIVFRGKNYERPVNLRPRTLLNKKQAM 3
            N+ YAIIV+RGKNYERP +LRP+TLL+K++AM
Sbjct: 661  NKGYAIIVYRGKNYERPASLRPQTLLSKREAM 692



 Score = 59.3 bits (142), Expect = 3e-06
 Identities = 37/124 (29%), Positives = 63/124 (50%)
 Frame = -2

Query: 419 LERKAKAERILAELEKVAEPQKPEIDREGISEEERYMLKKVGLAMKPYVPMGRRGVFDGT 240
           L+ K K      E +K   P   E+    +  EE   L+ VG+A++  + +G+ G+ +G 
Sbjct: 147 LKEKDKERLKNKEYKKERAPSLAELT---LPAEELRRLRTVGIALRKKLKIGKAGITEGI 203

Query: 239 VENMHLHWKYRELVKLISSDRCIENVHAAARRLEAESGGILVAVERVNRAYAIIVFRGKN 60
           V  +H  W+  ELVK+   D C  N+      LE ++GG+++     N    II++RG +
Sbjct: 204 VNGIHERWRRIELVKITCEDICRLNMKRTHELLEKKTGGLVIWRSGSN----IILYRGAD 259

Query: 59  YERP 48
           Y+ P
Sbjct: 260 YKYP 263


>ref|XP_002517407.1| conserved hypothetical protein [Ricinus communis]
            gi|223543418|gb|EEF44949.1| conserved hypothetical
            protein [Ricinus communis]
          Length = 1009

 Score =  523 bits (1348), Expect = e-146
 Identities = 260/389 (66%), Positives = 317/389 (81%), Gaps = 3/389 (0%)
 Frame = -2

Query: 1160 SLVNGVGSPSRVRFQLPGEAQLAEEADRLLDGLGPRFTDWWGYDPIPVDADLLSAAVPGY 981
            +L+ GVG P+RVRFQLPGEAQLAEE D LL+GLGPRF+DWWGY+P+PVDADLL A VPGY
Sbjct: 302  ALIQGVGLPNRVRFQLPGEAQLAEEVDSLLEGLGPRFSDWWGYEPLPVDADLLPAIVPGY 361

Query: 980  RRPFRLLPYGVKPKLTDDEMTTLRRLSRPLPTHFALGRNKNLQGLAASMVKLWEKCEIAK 801
            ++PFRLLPYG+KP LT+DEMTTL+RL RPLP HF LGRN+ LQGLAAS++KLWEKCEIAK
Sbjct: 362  QKPFRLLPYGIKPILTNDEMTTLKRLGRPLPCHFVLGRNRKLQGLAASIIKLWEKCEIAK 421

Query: 800  VAVKRGVQNTNSEMMADELKRLTGGTLISRDREFIAFYRGKDFLPPAVSTAIEERRKHSV 621
            +AVKRGVQNTNSEMMA+ELKRLTGGTL+SRDREFI  YRGKDFLP AVS+AI+ERR H  
Sbjct: 422  IAVKRGVQNTNSEMMAEELKRLTGGTLLSRDREFIVLYRGKDFLPSAVSSAIKERRNHVF 481

Query: 620  HREKHYTDQTPSIATKSE---LELRTNEPASVDELQETNDQNKRKLVLEQRKVRSKDLAM 450
            +  K  TD + S  T  E   +E  T+   S DE    N+Q+    + +QRK+     A+
Sbjct: 482  NVAKERTDNSTSAETAKEAEDVEDGTSNSGSQDEFHGNNEQSYD--LSKQRKLSFTKEAI 539

Query: 449  KRINTKLSMALERKAKAERILAELEKVAEPQKPEIDREGISEEERYMLKKVGLAMKPYVP 270
            KR + +LSMALE+KAKA ++LAE+E     Q+PEID+EGI++EERYML+KVGL MKP++ 
Sbjct: 540  KRTSIRLSMALEKKAKAVKLLAEIENSEMSQQPEIDKEGITDEERYMLRKVGLKMKPFLL 599

Query: 269  MGRRGVFDGTVENMHLHWKYRELVKLISSDRCIENVHAAARRLEAESGGILVAVERVNRA 90
            +GRRGVFDGT+ENMHLHWKYRELVK+I  +R +  VH  A+ LEAESGGILVAVERV++ 
Sbjct: 600  IGRRGVFDGTIENMHLHWKYRELVKIICKERSLNAVHEVAQSLEAESGGILVAVERVSKG 659

Query: 89   YAIIVFRGKNYERPVNLRPRTLLNKKQAM 3
            YAI+V+RGKNY+RP  LRP TLL+K++AM
Sbjct: 660  YAIVVYRGKNYQRPALLRPPTLLSKREAM 688



 Score = 68.6 bits (166), Expect = 5e-09
 Identities = 41/134 (30%), Positives = 69/134 (51%)
 Frame = -2

Query: 419 LERKAKAERILAELEKVAEPQKPEIDREGISEEERYMLKKVGLAMKPYVPMGRRGVFDGT 240
           L ++ K ER     +K  E + P +    +SEEE   L+++G+A K  + +G+ G+ +G 
Sbjct: 133 LRKQVKKERE----DKKREAKVPTLAELSLSEEELRRLRRIGIAEKRKLKVGKAGITEGI 188

Query: 239 VENMHLHWKYRELVKLISSDRCIENVHAAARRLEAESGGILVAVERVNRAYAIIVFRGKN 60
           V  +H  W+  E+VK++  D C  N+      LE ++GG++V          I+++RG N
Sbjct: 189 VNGIHERWRRSEVVKIVCEDLCRMNMKRTHDLLERKTGGLVV----WRAGSKIVLYRGVN 244

Query: 59  YERPVNLRPRTLLN 18
           Y  P  L   T  N
Sbjct: 245 YIYPYFLSDNTTEN 258


>ref|XP_006338519.1| PREDICTED: chloroplastic group IIA intron splicing facilitator CRS1,
            chloroplastic-like isoform X2 [Solanum tuberosum]
          Length = 878

 Score =  519 bits (1336), Expect = e-144
 Identities = 267/418 (63%), Positives = 323/418 (77%), Gaps = 10/418 (2%)
 Frame = -2

Query: 1226 TPDDELSSEFSMVNRV----------DSRKDLSLVNGVGSPSRVRFQLPGEAQLAEEADR 1077
            TPD  + +E  M N            D +    ++ GVGSP RVRF+LPGEA+  EEAD+
Sbjct: 279  TPDLFMGTEEHMTNSSGTDVVKPDASDRKSPPRVIQGVGSPDRVRFELPGEAEHTEEADK 338

Query: 1076 LLDGLGPRFTDWWGYDPIPVDADLLSAAVPGYRRPFRLLPYGVKPKLTDDEMTTLRRLSR 897
            LL+GLGPRFTDWWG +P+P+DADLL A VPGY+RPFRLLPYGVKPKLT+DEMTTLRRL R
Sbjct: 339  LLEGLGPRFTDWWGCEPLPIDADLLPAIVPGYKRPFRLLPYGVKPKLTNDEMTTLRRLGR 398

Query: 896  PLPTHFALGRNKNLQGLAASMVKLWEKCEIAKVAVKRGVQNTNSEMMADELKRLTGGTLI 717
            PLP HF LGRN+ LQGLAA++VKLWEKCEIAKVAVKRGVQNTNSE+MA+ELK LTGGTL+
Sbjct: 399  PLPCHFVLGRNRKLQGLAAAIVKLWEKCEIAKVAVKRGVQNTNSELMAEELKWLTGGTLL 458

Query: 716  SRDREFIAFYRGKDFLPPAVSTAIEERRKHSVHREKHYTDQTPSIATKSELELRTNEPAS 537
            SRDREFI FYRGKDFLP AVS+AIEERRK     EK       S+A   E +  T    S
Sbjct: 459  SRDREFIVFYRGKDFLPSAVSSAIEERRKQVFEEEKR-NGFNSSVANAKERKQSTTGSVS 517

Query: 536  VDELQETNDQNKRKLVLEQRKVRSKDLAMKRINTKLSMALERKAKAERILAELEKVAEPQ 357
             D     N+Q   K V E++K+ S + A+KR   KL+ ALE+KA+AE +L ELE+   PQ
Sbjct: 518  DDGHARRNNQ---KGVQEKKKLTSMEAAIKRTADKLTTALEKKAEAENLLLELEEDEVPQ 574

Query: 356  KPEIDREGISEEERYMLKKVGLAMKPYVPMGRRGVFDGTVENMHLHWKYRELVKLISSDR 177
            + ++D+EGI+EEER+ML+K+GL MKP++ +GRRGVFDGTVENMHLHWKYRELVK+I+  +
Sbjct: 575  QSDMDKEGITEEERFMLRKIGLRMKPFLLLGRRGVFDGTVENMHLHWKYRELVKVITGRK 634

Query: 176  CIENVHAAARRLEAESGGILVAVERVNRAYAIIVFRGKNYERPVNLRPRTLLNKKQAM 3
             IE VH  AR LEAESGGILVAVE VN+ +AIIV+RGKNYERP +LRP+TLL+K++AM
Sbjct: 635  TIEEVHQIARMLEAESGGILVAVELVNKGHAIIVYRGKNYERPASLRPQTLLSKREAM 692



 Score = 60.5 bits (145), Expect = 1e-06
 Identities = 37/124 (29%), Positives = 63/124 (50%)
 Frame = -2

Query: 419 LERKAKAERILAELEKVAEPQKPEIDREGISEEERYMLKKVGLAMKPYVPMGRRGVFDGT 240
           L+ K K      E +K   P   E+    +  EE   L+ VG+A++  + +G+ G+ +G 
Sbjct: 147 LKEKEKERLKNKEYKKERAPSLAELT---LPAEELRRLRTVGIALRKKLKIGKAGITEGI 203

Query: 239 VENMHLHWKYRELVKLISSDRCIENVHAAARRLEAESGGILVAVERVNRAYAIIVFRGKN 60
           V  +H  W+  ELVK+   D C  N+      LE ++GG+++     N    II++RG +
Sbjct: 204 VNGIHERWRRMELVKITCEDICRLNMKRTHELLEKKTGGLVIWRSGSN----IILYRGAD 259

Query: 59  YERP 48
           Y+ P
Sbjct: 260 YKYP 263


>ref|XP_006338518.1| PREDICTED: chloroplastic group IIA intron splicing facilitator CRS1,
            chloroplastic-like isoform X1 [Solanum tuberosum]
          Length = 1049

 Score =  519 bits (1336), Expect = e-144
 Identities = 267/418 (63%), Positives = 323/418 (77%), Gaps = 10/418 (2%)
 Frame = -2

Query: 1226 TPDDELSSEFSMVNRV----------DSRKDLSLVNGVGSPSRVRFQLPGEAQLAEEADR 1077
            TPD  + +E  M N            D +    ++ GVGSP RVRF+LPGEA+  EEAD+
Sbjct: 279  TPDLFMGTEEHMTNSSGTDVVKPDASDRKSPPRVIQGVGSPDRVRFELPGEAEHTEEADK 338

Query: 1076 LLDGLGPRFTDWWGYDPIPVDADLLSAAVPGYRRPFRLLPYGVKPKLTDDEMTTLRRLSR 897
            LL+GLGPRFTDWWG +P+P+DADLL A VPGY+RPFRLLPYGVKPKLT+DEMTTLRRL R
Sbjct: 339  LLEGLGPRFTDWWGCEPLPIDADLLPAIVPGYKRPFRLLPYGVKPKLTNDEMTTLRRLGR 398

Query: 896  PLPTHFALGRNKNLQGLAASMVKLWEKCEIAKVAVKRGVQNTNSEMMADELKRLTGGTLI 717
            PLP HF LGRN+ LQGLAA++VKLWEKCEIAKVAVKRGVQNTNSE+MA+ELK LTGGTL+
Sbjct: 399  PLPCHFVLGRNRKLQGLAAAIVKLWEKCEIAKVAVKRGVQNTNSELMAEELKWLTGGTLL 458

Query: 716  SRDREFIAFYRGKDFLPPAVSTAIEERRKHSVHREKHYTDQTPSIATKSELELRTNEPAS 537
            SRDREFI FYRGKDFLP AVS+AIEERRK     EK       S+A   E +  T    S
Sbjct: 459  SRDREFIVFYRGKDFLPSAVSSAIEERRKQVFEEEKR-NGFNSSVANAKERKQSTTGSVS 517

Query: 536  VDELQETNDQNKRKLVLEQRKVRSKDLAMKRINTKLSMALERKAKAERILAELEKVAEPQ 357
             D     N+Q   K V E++K+ S + A+KR   KL+ ALE+KA+AE +L ELE+   PQ
Sbjct: 518  DDGHARRNNQ---KGVQEKKKLTSMEAAIKRTADKLTTALEKKAEAENLLLELEEDEVPQ 574

Query: 356  KPEIDREGISEEERYMLKKVGLAMKPYVPMGRRGVFDGTVENMHLHWKYRELVKLISSDR 177
            + ++D+EGI+EEER+ML+K+GL MKP++ +GRRGVFDGTVENMHLHWKYRELVK+I+  +
Sbjct: 575  QSDMDKEGITEEERFMLRKIGLRMKPFLLLGRRGVFDGTVENMHLHWKYRELVKVITGRK 634

Query: 176  CIENVHAAARRLEAESGGILVAVERVNRAYAIIVFRGKNYERPVNLRPRTLLNKKQAM 3
             IE VH  AR LEAESGGILVAVE VN+ +AIIV+RGKNYERP +LRP+TLL+K++AM
Sbjct: 635  TIEEVHQIARMLEAESGGILVAVELVNKGHAIIVYRGKNYERPASLRPQTLLSKREAM 692



 Score = 60.5 bits (145), Expect = 1e-06
 Identities = 37/124 (29%), Positives = 63/124 (50%)
 Frame = -2

Query: 419 LERKAKAERILAELEKVAEPQKPEIDREGISEEERYMLKKVGLAMKPYVPMGRRGVFDGT 240
           L+ K K      E +K   P   E+    +  EE   L+ VG+A++  + +G+ G+ +G 
Sbjct: 147 LKEKEKERLKNKEYKKERAPSLAELT---LPAEELRRLRTVGIALRKKLKIGKAGITEGI 203

Query: 239 VENMHLHWKYRELVKLISSDRCIENVHAAARRLEAESGGILVAVERVNRAYAIIVFRGKN 60
           V  +H  W+  ELVK+   D C  N+      LE ++GG+++     N    II++RG +
Sbjct: 204 VNGIHERWRRMELVKITCEDICRLNMKRTHELLEKKTGGLVIWRSGSN----IILYRGAD 259

Query: 59  YERP 48
           Y+ P
Sbjct: 260 YKYP 263


>ref|XP_004164655.1| PREDICTED: LOW QUALITY PROTEIN: chloroplastic group IIA intron
            splicing facilitator CRS1, chloroplastic-like [Cucumis
            sativus]
          Length = 1053

 Score =  517 bits (1331), Expect = e-144
 Identities = 256/387 (66%), Positives = 323/387 (83%), Gaps = 1/387 (0%)
 Frame = -2

Query: 1160 SLVNGVGSPSRVRFQLPGEAQLAEEADRLLDGLGPRFTDWWGYDPIPVDADLLSAAVPGY 981
            +L+ GVG+P+RVRFQLPGEA+LAE+A+ LL+GLGPRF+DWWGYDP+PVDADLL A VPGY
Sbjct: 328  TLIQGVGAPNRVRFQLPGEAELAEDAESLLEGLGPRFSDWWGYDPLPVDADLLPAIVPGY 387

Query: 980  RRPFRLLPYGVKPKLTDDEMTTLRRLSRPLPTHFALGRNKNLQGLAASMVKLWEKCEIAK 801
            R+PFRLLPYGVKPKLT+DEMT+LRRL+RPLP HFALGRN+ LQGLAAS+++LWEKCEIAK
Sbjct: 388  RKPFRLLPYGVKPKLTNDEMTSLRRLARPLPCHFALGRNRKLQGLAASIIQLWEKCEIAK 447

Query: 800  VAVKRGVQNTNSEMMADELKRLTGGTLISRDREFIAFYRGKDFLPPAVSTAIEERRKHSV 621
            +AVKRGVQNTN+++MA+EL+ LTGGTL+SRDREFI  YRGKDFLP AVS+A+E++R   +
Sbjct: 448  IAVKRGVQNTNNKLMAEELQLLTGGTLLSRDREFIVLYRGKDFLPFAVSSAMEQKRHMRL 507

Query: 620  HREKHYTDQTPSIATKSELELRTNEPASVDELQETNDQNKRKLVLEQRKVRSKDLAMKRI 441
            H  K  TD +P+  T   L+L  NE    +E Q       +K+V E+RK+ S + +M++ 
Sbjct: 508  HEMKQ-TDNSPA-TTGQGLKLEINENGPTNESQSIT--GWKKIVSERRKLMSSETSMRKT 563

Query: 440  NTKLS-MALERKAKAERILAELEKVAEPQKPEIDREGISEEERYMLKKVGLAMKPYVPMG 264
            + KLS + + +KAKAE  LA+LE+  + Q+PEID+EGI+ EERYMLKKVGL MKP++ +G
Sbjct: 564  SIKLSIVCIRKKAKAEEFLAKLEEEEKLQQPEIDKEGITVEERYMLKKVGLRMKPFLLLG 623

Query: 263  RRGVFDGTVENMHLHWKYRELVKLISSDRCIENVHAAARRLEAESGGILVAVERVNRAYA 84
            RRGVFDGTVENMHLHWKYRELVK+I+++R  + VH  AR LEAESGGILVAVERV R++A
Sbjct: 624  RRGVFDGTVENMHLHWKYRELVKIITNERSFKTVHDVARTLEAESGGILVAVERVKRSFA 683

Query: 83   IIVFRGKNYERPVNLRPRTLLNKKQAM 3
            II+FRGKNY+RP  LRP +LLNKK+A+
Sbjct: 684  IIIFRGKNYKRPSRLRPESLLNKKEAL 710



 Score = 63.5 bits (153), Expect = 2e-07
 Identities = 35/110 (31%), Positives = 58/110 (52%)
 Frame = -2

Query: 377 EKVAEPQKPEIDREGISEEERYMLKKVGLAMKPYVPMGRRGVFDGTVENMHLHWKYRELV 198
           EK  E + P +    ++EEE   L+ +G+ +K  + +G+ G+ +G V  +H  W+  E+V
Sbjct: 169 EKKREERAPSLAELSLTEEELGRLRTIGIRLKKKLNVGKAGITEGIVNTIHEFWRRSEVV 228

Query: 197 KLISSDRCIENVHAAARRLEAESGGILVAVERVNRAYAIIVFRGKNYERP 48
           K+   D C  N+      LE ++GGI+V          II++RG NY  P
Sbjct: 229 KIACEDLCRLNMKRTHDLLERKTGGIVV----WRSGSKIILYRGPNYIYP 274