BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Akebia27_contig00009406
         (487 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_005646238.1| hypothetical protein COCSUDRAFT_67011 [Cocco...   178   8e-43
ref|XP_001697193.1| chlorophyll a-b binding protein of photosyst...   164   9e-39
ref|XP_002951424.1| chlorophyll a/b-binding protein of photosyst...   161   8e-38
tpg|DAA05897.1| TPA_inf: chloroplast light-harvesting protein CP...   157   1e-36
gb|ABD37915.1| light-harvesting chlorophyll-a/b binding protein ...   139   4e-31
gb|AAP79139.1| chlorophyll a/b-binding protein CP29 [Bigelowiell...   131   8e-29
ref|XP_007009013.1| Light-harvesting complex II protein Lhcb8 [T...   130   1e-28
ref|XP_005646225.1| chlorophyll a/b-binding protein CP29 [Coccom...   130   2e-28
gb|ACF24530.1| chlorophyll a/b binding protein CP29 [Gymnochlora...   128   9e-28
ref|XP_002309134.1| chlorophyll a/b binding protein CP29 [Populu...   127   2e-27
ref|XP_006294771.1| hypothetical protein CARUB_v10023823mg [Caps...   126   3e-27
ref|XP_002312153.1| Chlorophyll a-b binding protein CP29.3 [Popu...   126   4e-27
gb|ABK96737.1| unknown [Populus trichocarpa x Populus deltoides]      125   5e-27
ref|XP_006411258.1| hypothetical protein EUTSA_v10017060mg [Eutr...   125   6e-27
gb|ACU19827.1| unknown [Glycine max]                                  124   1e-26
ref|XP_002879843.1| LHCB4.3 [Arabidopsis lyrata subsp. lyrata] g...   124   1e-26
ref|XP_002526901.1| chlorophyll A/B binding protein, putative [R...   124   1e-26
gb|EXC23662.1| hypothetical protein L484_015572 [Morus notabilis]     124   2e-26
gb|AAM65936.1| putative chlorophyll a/b binding protein [Arabido...   124   2e-26
ref|NP_181539.1| light harvesting complex photosystem II [Arabid...   124   2e-26

>ref|XP_005646238.1| hypothetical protein COCSUDRAFT_67011 [Coccomyxa subellipsoidea
           C-169] gi|384248209|gb|EIE21694.1| hypothetical protein
           COCSUDRAFT_67011 [Coccomyxa subellipsoidea C-169]
          Length = 316

 Score =  178 bits (451), Expect = 8e-43
 Identities = 85/110 (77%), Positives = 100/110 (90%)
 Frame = +1

Query: 1   AGKVELDGAQYLGFRIPLSITALVWIEAILVGGAEIYRNGERDPEKRVYPGGAFDPLGLA 180
           AGKVELDGAQYLGF +P SI+ LVWIEAILVGGAEIYRN E +P+ R+YPGG FDPLGLA
Sbjct: 192 AGKVELDGAQYLGFSLPFSISQLVWIEAILVGGAEIYRNRELEPQARIYPGGYFDPLGLA 251

Query: 181 SENDAKAFRLKTAEIKHGRLAMVAFLGFGVQALVTGQGALGSLAQFSNTF 330
           + +DA+AF+LK AE+KHGRLAM+AFLGFGVQAL TGQGALGSLA+F+++F
Sbjct: 252 TGDDARAFKLKEAELKHGRLAMIAFLGFGVQALATGQGALGSLAKFASSF 301


>ref|XP_001697193.1| chlorophyll a-b binding protein of photosystem II [Chlamydomonas
           reinhardtii] gi|60391855|sp|Q93WD2.3|CB29_CHLRE RecName:
           Full=Chlorophyll a-b binding protein CP29; AltName:
           Full=Lhcbm4 gi|15430560|dbj|BAB64415.1| light-harvesting
           chlorophyll-a/b binding protein Lhcb4 [Chlamydomonas
           reinhardtii] gi|15430568|dbj|BAB64419.1|
           light-harvesting chlorophyll-a/b binding protein Lhcb4
           [Chlamydomonas reinhardtii] gi|27542567|gb|AAO16494.1|
           CP29-like protein [Chlamydomonas reinhardtii]
           gi|158274667|gb|EDP00448.1| chlorophyll a-b binding
           protein of photosystem II [Chlamydomonas reinhardtii]
          Length = 280

 Score =  164 bits (416), Expect = 9e-39
 Identities = 79/108 (73%), Positives = 91/108 (84%)
 Frame = +1

Query: 1   AGKVELDGAQYLGFRIPLSITALVWIEAILVGGAEIYRNGERDPEKRVYPGGAFDPLGLA 180
           AGKVELDGA Y G  +P SIT L+WIE ILVGGAE YRN E +PEKR YPGG FDPL LA
Sbjct: 165 AGKVELDGASYAGLSLPFSITQLIWIEVILVGGAEFYRNSETNPEKRCYPGGVFDPLKLA 224

Query: 181 SENDAKAFRLKTAEIKHGRLAMVAFLGFGVQALVTGQGALGSLAQFSN 324
           SE++ +AFRLKTAEIKH RLAMV+F G+GVQAL TG+GALGSLA+F++
Sbjct: 225 SEDEERAFRLKTAEIKHARLAMVSFFGYGVQALSTGEGALGSLAKFAD 272


>ref|XP_002951424.1| chlorophyll a/b-binding protein of photosystem II [Volvox carteri
           f. nagariensis] gi|300263399|gb|EFJ47600.1| chlorophyll
           a/b-binding protein of photosystem II [Volvox carteri f.
           nagariensis]
          Length = 317

 Score =  161 bits (408), Expect = 8e-38
 Identities = 78/108 (72%), Positives = 90/108 (83%)
 Frame = +1

Query: 1   AGKVELDGAQYLGFRIPLSITALVWIEAILVGGAEIYRNGERDPEKRVYPGGAFDPLGLA 180
           AGKVELDGA Y G  +P SIT L+WIE ILVGGAEIYRN E +PEKR YPGG FDPL LA
Sbjct: 202 AGKVELDGASYAGLSLPFSITQLIWIEVILVGGAEIYRNTETNPEKRCYPGGFFDPLKLA 261

Query: 181 SENDAKAFRLKTAEIKHGRLAMVAFLGFGVQALVTGQGALGSLAQFSN 324
           SE++ +AFRLKTAEIKH RLAMV+F G+ VQA  TG+GALGSLA+F++
Sbjct: 262 SEDEERAFRLKTAEIKHARLAMVSFFGYSVQAFTTGEGALGSLAKFAD 309


>tpg|DAA05897.1| TPA_inf: chloroplast light-harvesting protein CP29 precursor Lhcb4
           [Acetabularia acetabulum]
          Length = 275

 Score =  157 bits (397), Expect = 1e-36
 Identities = 78/107 (72%), Positives = 88/107 (82%)
 Frame = +1

Query: 1   AGKVELDGAQYLGFRIPLSITALVWIEAILVGGAEIYRNGERDPEKRVYPGGAFDPLGLA 180
           AGKVELDGAQY  F +P SIT LVWIEAILVGGAEIYRN E D  KR YPGG FDPL LA
Sbjct: 165 AGKVELDGAQYFNFNLPFSITQLVWIEAILVGGAEIYRNTELDSVKRCYPGGIFDPLKLA 224

Query: 181 SENDAKAFRLKTAEIKHGRLAMVAFLGFGVQALVTGQGALGSLAQFS 321
           S++  ++F+LK AEIKH RLAM+AFLG+ +QA VTGQGALGSLA F+
Sbjct: 225 SDDSERSFKLKEAEIKHARLAMIAFLGYSIQAGVTGQGALGSLALFA 271


>gb|ABD37915.1| light-harvesting chlorophyll-a/b binding protein Lhcb4
           [Chlamydomonas incerta]
          Length = 259

 Score =  139 bits (350), Expect = 4e-31
 Identities = 66/89 (74%), Positives = 73/89 (82%)
 Frame = +1

Query: 1   AGKVELDGAQYLGFRIPLSITALVWIEAILVGGAEIYRNGERDPEKRVYPGGAFDPLGLA 180
           AGKVELDGA Y G  +P SIT L+WIE ILVGGAE YRN E DPEKR YPGG FDPL LA
Sbjct: 171 AGKVELDGASYAGLSLPFSITQLIWIEVILVGGAEFYRNTETDPEKRCYPGGVFDPLKLA 230

Query: 181 SENDAKAFRLKTAEIKHGRLAMVAFLGFG 267
           SE++ +AFRLKTAEIKH RLAMV+F G+G
Sbjct: 231 SEDEERAFRLKTAEIKHARLAMVSFFGYG 259


>gb|AAP79139.1| chlorophyll a/b-binding protein CP29 [Bigelowiella natans]
          Length = 291

 Score =  131 bits (330), Expect = 8e-29
 Identities = 62/104 (59%), Positives = 80/104 (76%)
 Frame = +1

Query: 1   AGKVELDGAQYLGFRIPLSITALVWIEAILVGGAEIYRNGERDPEKRVYPGGAFDPLGLA 180
           AGKVELDGA+YL F +P +++ L  +E +LVGGAEIYRN E D +KR+YPGG FDPLG  
Sbjct: 185 AGKVELDGARYLNFDLPFTVSQLTLLEVLLVGGAEIYRNTETDLDKRLYPGGTFDPLGFT 244

Query: 181 SENDAKAFRLKTAEIKHGRLAMVAFLGFGVQALVTGQGALGSLA 312
           +++D +  RL+ AEIKHGRLAMVA  G GVQA  TG+G + +L+
Sbjct: 245 TKSDEQTMRLREAEIKHGRLAMVAAFGCGVQAFTTGEGLIENLS 288


>ref|XP_007009013.1| Light-harvesting complex II protein Lhcb8 [Theobroma cacao]
           gi|508725926|gb|EOY17823.1| Light-harvesting complex II
           protein Lhcb8 [Theobroma cacao]
          Length = 277

 Score =  130 bits (328), Expect = 1e-28
 Identities = 68/109 (62%), Positives = 82/109 (75%), Gaps = 1/109 (0%)
 Frame = +1

Query: 1   AGKVEL-DGAQYLGFRIPLSITALVWIEAILVGGAEIYRNGERDPEKRVYPGGAFDPLGL 177
           AGKVEL +G+ YLG  +P S+TAL+WIE +++G  E  RN E DPEKR+YPGG FDPLGL
Sbjct: 170 AGKVELVEGSSYLGQPLPFSLTALIWIEVLVIGYIEFQRNAELDPEKRLYPGGYFDPLGL 229

Query: 178 ASENDAKAFRLKTAEIKHGRLAMVAFLGFGVQALVTGQGALGSLAQFSN 324
           AS+   K   LK AEIKH RLAMVAFL FG+QA VTG+G L  +A F+N
Sbjct: 230 ASD-PQKIDNLKLAEIKHSRLAMVAFLIFGIQAAVTGKGPLSFIASFNN 277


>ref|XP_005646225.1| chlorophyll a/b-binding protein CP29 [Coccomyxa subellipsoidea
           C-169] gi|384248196|gb|EIE21681.1| chlorophyll
           a/b-binding protein CP29 [Coccomyxa subellipsoidea
           C-169]
          Length = 267

 Score =  130 bits (327), Expect = 2e-28
 Identities = 61/92 (66%), Positives = 75/92 (81%)
 Frame = +1

Query: 1   AGKVELDGAQYLGFRIPLSITALVWIEAILVGGAEIYRNGERDPEKRVYPGGAFDPLGLA 180
           AGKVELDG QYLGF +P SI+ L+WIE +LVGGAEIYRN   D ++R+YPGG FDPL LA
Sbjct: 165 AGKVELDGTQYLGFSLPFSISQLIWIEVLLVGGAEIYRNRSTDLQERIYPGGLFDPLKLA 224

Query: 181 SENDAKAFRLKTAEIKHGRLAMVAFLGFGVQA 276
           S++  + F+L+ AEIKHGRLAMVAFLG  +Q+
Sbjct: 225 SDDSQRTFKLREAEIKHGRLAMVAFLGAQLQS 256


>gb|ACF24530.1| chlorophyll a/b binding protein CP29 [Gymnochlora stellata]
          Length = 290

 Score =  128 bits (321), Expect = 9e-28
 Identities = 62/104 (59%), Positives = 79/104 (75%)
 Frame = +1

Query: 1   AGKVELDGAQYLGFRIPLSITALVWIEAILVGGAEIYRNGERDPEKRVYPGGAFDPLGLA 180
           AGKVELDGA+YL F +P +++ L  +E +LVGGAEIYRN E D +KR+YPGG FDPLGL 
Sbjct: 184 AGKVELDGARYLNFNLPFTVSQLTLLEVLLVGGAEIYRNTETDLDKRLYPGGYFDPLGLT 243

Query: 181 SENDAKAFRLKTAEIKHGRLAMVAFLGFGVQALVTGQGALGSLA 312
           +++  +   L+ AEIKHGRLAMVA  G GVQA  TG+G L +L+
Sbjct: 244 TKSAEQTQNLREAEIKHGRLAMVAAFGCGVQAFTTGEGLLDNLS 287


>ref|XP_002309134.1| chlorophyll a/b binding protein CP29 [Populus trichocarpa]
           gi|118489077|gb|ABK96345.1| unknown [Populus trichocarpa
           x Populus deltoides] gi|222855110|gb|EEE92657.1|
           chlorophyll a/b binding protein CP29 [Populus
           trichocarpa]
          Length = 285

 Score =  127 bits (319), Expect = 2e-27
 Identities = 69/106 (65%), Positives = 82/106 (77%), Gaps = 2/106 (1%)
 Frame = +1

Query: 1   AGKVEL-DGAQYLGFRIPLSITALVWIEAILVGGAEIYRNGERDPEKRVYPGGA-FDPLG 174
           AGKVEL +G+ YLG  +P SITAL+WIEA+++G  E  RN E DPEKR+YPGG  FDPLG
Sbjct: 164 AGKVELVEGSSYLGQPLPFSITALIWIEAVIIGYIEFQRNAELDPEKRLYPGGQFFDPLG 223

Query: 175 LASENDAKAFRLKTAEIKHGRLAMVAFLGFGVQALVTGQGALGSLA 312
           LAS+ + KA  L+ AEIKH RLAMVAFLGF VQA VTG+G L + A
Sbjct: 224 LASDPEKKA-TLQLAEIKHARLAMVAFLGFAVQAWVTGKGPLNNWA 268


>ref|XP_006294771.1| hypothetical protein CARUB_v10023823mg [Capsella rubella]
           gi|482563479|gb|EOA27669.1| hypothetical protein
           CARUB_v10023823mg [Capsella rubella]
          Length = 276

 Score =  126 bits (317), Expect = 3e-27
 Identities = 66/109 (60%), Positives = 81/109 (74%), Gaps = 1/109 (0%)
 Frame = +1

Query: 1   AGKVEL-DGAQYLGFRIPLSITALVWIEAILVGGAEIYRNGERDPEKRVYPGGAFDPLGL 177
           AGKVEL +G+ YLG  +P S+T L+WIE ++VG  E  RN E +PEKR+YPGG FDPLGL
Sbjct: 169 AGKVELVEGSSYLGQPLPFSLTTLIWIEVLVVGYIEFQRNAELEPEKRIYPGGYFDPLGL 228

Query: 178 ASENDAKAFRLKTAEIKHGRLAMVAFLGFGVQALVTGQGALGSLAQFSN 324
           A++ + K   LK AEIKH RLAMVAFL FG+QA  TG+G +  LA FSN
Sbjct: 229 AADPE-KLDTLKLAEIKHSRLAMVAFLIFGLQAAFTGKGPISFLASFSN 276


>ref|XP_002312153.1| Chlorophyll a-b binding protein CP29.3 [Populus trichocarpa]
           gi|222851973|gb|EEE89520.1| Chlorophyll a-b binding
           protein CP29.3 [Populus trichocarpa]
          Length = 275

 Score =  126 bits (316), Expect = 4e-27
 Identities = 66/109 (60%), Positives = 81/109 (74%), Gaps = 1/109 (0%)
 Frame = +1

Query: 1   AGKVEL-DGAQYLGFRIPLSITALVWIEAILVGGAEIYRNGERDPEKRVYPGGAFDPLGL 177
           AGKVEL +G+ YLG  +P S+T L+WIE I+VG  E  RN E DPEKR+YPGG FDPLGL
Sbjct: 168 AGKVELIEGSSYLGQPLPFSLTTLIWIEVIVVGYIEFQRNAELDPEKRLYPGGYFDPLGL 227

Query: 178 ASENDAKAFRLKTAEIKHGRLAMVAFLGFGVQALVTGQGALGSLAQFSN 324
           AS+ + K   L+ AEIKH RLAMVAFL FG+QA  TG+G +  +A F+N
Sbjct: 228 ASDPE-KIENLQLAEIKHARLAMVAFLIFGIQAAFTGKGPISFVATFNN 275


>gb|ABK96737.1| unknown [Populus trichocarpa x Populus deltoides]
          Length = 275

 Score =  125 bits (315), Expect = 5e-27
 Identities = 65/109 (59%), Positives = 81/109 (74%), Gaps = 1/109 (0%)
 Frame = +1

Query: 1   AGKVEL-DGAQYLGFRIPLSITALVWIEAILVGGAEIYRNGERDPEKRVYPGGAFDPLGL 177
           AGKVEL +G+ YLG  +P S+T L+WIE I++G  E  RN E DPEKR+YPGG FDPLGL
Sbjct: 168 AGKVELIEGSSYLGQPLPFSLTTLIWIEVIVIGYIEFQRNAELDPEKRLYPGGYFDPLGL 227

Query: 178 ASENDAKAFRLKTAEIKHGRLAMVAFLGFGVQALVTGQGALGSLAQFSN 324
           AS+ + K   L+ AEIKH RLAMVAFL FG+QA  TG+G +  +A F+N
Sbjct: 228 ASDPE-KIENLQLAEIKHARLAMVAFLIFGIQAAFTGKGPISFVATFNN 275


>ref|XP_006411258.1| hypothetical protein EUTSA_v10017060mg [Eutrema salsugineum]
           gi|312281687|dbj|BAJ33709.1| unnamed protein product
           [Thellungiella halophila] gi|557112427|gb|ESQ52711.1|
           hypothetical protein EUTSA_v10017060mg [Eutrema
           salsugineum]
          Length = 276

 Score =  125 bits (314), Expect = 6e-27
 Identities = 65/109 (59%), Positives = 80/109 (73%), Gaps = 1/109 (0%)
 Frame = +1

Query: 1   AGKVEL-DGAQYLGFRIPLSITALVWIEAILVGGAEIYRNGERDPEKRVYPGGAFDPLGL 177
           AGKVEL +G+ YLG  +P S+T L+WIE ++VG  E  RN E DPEKR+YPGG FDPLGL
Sbjct: 169 AGKVELVEGSSYLGQPLPFSLTTLIWIEVLVVGYIEFQRNAELDPEKRIYPGGYFDPLGL 228

Query: 178 ASENDAKAFRLKTAEIKHGRLAMVAFLGFGVQALVTGQGALGSLAQFSN 324
            S+ + K   LK AEIKH RLAMVAFL FG+QA  TG+G +  +A F+N
Sbjct: 229 GSDPE-KLDTLKLAEIKHSRLAMVAFLIFGLQAAFTGKGPISFIATFNN 276


>gb|ACU19827.1| unknown [Glycine max]
          Length = 290

 Score =  124 bits (312), Expect = 1e-26
 Identities = 67/106 (63%), Positives = 81/106 (76%), Gaps = 2/106 (1%)
 Frame = +1

Query: 1   AGKVEL-DGAQYLGFRIPLSITALVWIEAILVGGAEIYRNGERDPEKRVYPGGA-FDPLG 174
           AGKVEL +G+ YLG  +P SIT L+WIEA+++G  E  RN E DPEKR+YPGG+ FDPLG
Sbjct: 167 AGKVELVEGSSYLGQPLPFSITTLIWIEALVIGYIEFQRNAELDPEKRLYPGGSYFDPLG 226

Query: 175 LASENDAKAFRLKTAEIKHGRLAMVAFLGFGVQALVTGQGALGSLA 312
           LAS+ + KA  L+ AEIKH RLAMV FLGF VQA VTG+G L + A
Sbjct: 227 LASDPEKKA-TLQLAEIKHARLAMVGFLGFAVQAAVTGKGPLNNWA 271


>ref|XP_002879843.1| LHCB4.3 [Arabidopsis lyrata subsp. lyrata]
           gi|297325682|gb|EFH56102.1| LHCB4.3 [Arabidopsis lyrata
           subsp. lyrata]
          Length = 276

 Score =  124 bits (311), Expect = 1e-26
 Identities = 65/109 (59%), Positives = 80/109 (73%), Gaps = 1/109 (0%)
 Frame = +1

Query: 1   AGKVEL-DGAQYLGFRIPLSITALVWIEAILVGGAEIYRNGERDPEKRVYPGGAFDPLGL 177
           AGKVEL +G+ YLG  +P S+T L+WIE ++VG  E  RN E DPEKR+YPGG FDPLGL
Sbjct: 169 AGKVELVEGSSYLGQPLPFSLTTLIWIEVLVVGYIEFQRNSELDPEKRIYPGGYFDPLGL 228

Query: 178 ASENDAKAFRLKTAEIKHGRLAMVAFLGFGVQALVTGQGALGSLAQFSN 324
           A++ + K   LK AEIKH RLAMVAFL F +QA  TG+G +  LA F+N
Sbjct: 229 AADPE-KLDTLKLAEIKHSRLAMVAFLIFALQAAFTGKGPISFLATFNN 276


>ref|XP_002526901.1| chlorophyll A/B binding protein, putative [Ricinus communis]
           gi|223533800|gb|EEF35532.1| chlorophyll A/B binding
           protein, putative [Ricinus communis]
          Length = 282

 Score =  124 bits (311), Expect = 1e-26
 Identities = 63/108 (58%), Positives = 80/108 (74%), Gaps = 1/108 (0%)
 Frame = +1

Query: 1   AGKVEL-DGAQYLGFRIPLSITALVWIEAILVGGAEIYRNGERDPEKRVYPGGAFDPLGL 177
           AGKVEL +G+ YLG  +P S+T L+WIE +++G  E  RN E DPEKR+YPGG FDPLGL
Sbjct: 175 AGKVELVEGSSYLGQPLPFSLTTLIWIEVLVIGYIEFQRNAELDPEKRIYPGGYFDPLGL 234

Query: 178 ASENDAKAFRLKTAEIKHGRLAMVAFLGFGVQALVTGQGALGSLAQFS 321
           AS+ + K   L+ AEIKH RLAMVAFL FG+QA  TG+G +  +A F+
Sbjct: 235 ASDPEKKE-NLQLAEIKHSRLAMVAFLIFGIQAAFTGKGPIAFVATFN 281


>gb|EXC23662.1| hypothetical protein L484_015572 [Morus notabilis]
          Length = 287

 Score =  124 bits (310), Expect = 2e-26
 Identities = 67/106 (63%), Positives = 80/106 (75%), Gaps = 2/106 (1%)
 Frame = +1

Query: 1   AGKVEL-DGAQYLGFRIPLSITALVWIEAILVGGAEIYRNGERDPEKRVYPGGA-FDPLG 174
           AGKVEL +G+ YLG  +P SIT L+WIE +++G  E  RN E DPEKR+YPGG  FDPLG
Sbjct: 165 AGKVELVEGSSYLGQPLPFSITTLIWIEVLVIGYIEFQRNAELDPEKRLYPGGKFFDPLG 224

Query: 175 LASENDAKAFRLKTAEIKHGRLAMVAFLGFGVQALVTGQGALGSLA 312
           LAS+ + KA  L+ AEIKH RLAMVAFLGF VQA VTG+G L + A
Sbjct: 225 LASDPEKKA-TLQLAEIKHARLAMVAFLGFAVQAAVTGKGPLNNWA 269


>gb|AAM65936.1| putative chlorophyll a/b binding protein [Arabidopsis thaliana]
          Length = 276

 Score =  124 bits (310), Expect = 2e-26
 Identities = 65/109 (59%), Positives = 80/109 (73%), Gaps = 1/109 (0%)
 Frame = +1

Query: 1   AGKVEL-DGAQYLGFRIPLSITALVWIEAILVGGAEIYRNGERDPEKRVYPGGAFDPLGL 177
           AGKVEL +G+ YLG  +P S+T L+WIE ++VG  E  RN E DPEKR+YPGG FDPLGL
Sbjct: 169 AGKVELVEGSSYLGQPLPFSLTTLIWIEVLVVGYIEFQRNSELDPEKRIYPGGYFDPLGL 228

Query: 178 ASENDAKAFRLKTAEIKHGRLAMVAFLGFGVQALVTGQGALGSLAQFSN 324
           A++ + K   LK AEIKH RLAMVAFL F +QA  TG+G +  LA F+N
Sbjct: 229 AADPE-KLDTLKLAEIKHSRLAMVAFLIFALQAAFTGKGPVSFLATFNN 276


>ref|NP_181539.1| light harvesting complex photosystem II [Arabidopsis thaliana]
           gi|38503231|sp|Q9S7W1.1|CB4C_ARATH RecName:
           Full=Chlorophyll a-b binding protein CP29.3,
           chloroplastic; AltName: Full=LHCB4.3; AltName:
           Full=LHCII protein 4.3; Flags: Precursor
           gi|4741956|gb|AAD28775.1|AF134128_1 Lhcb4:3 protein
           [Arabidopsis thaliana] gi|17979325|gb|AAL49888.1|
           putative chlorophyll a/b binding protein [Arabidopsis
           thaliana] gi|20465761|gb|AAM20369.1| putative
           chlorophyll a/b binding protein [Arabidopsis thaliana]
           gi|330254684|gb|AEC09778.1| light harvesting complex
           photosystem II [Arabidopsis thaliana]
          Length = 276

 Score =  124 bits (310), Expect = 2e-26
 Identities = 65/109 (59%), Positives = 80/109 (73%), Gaps = 1/109 (0%)
 Frame = +1

Query: 1   AGKVEL-DGAQYLGFRIPLSITALVWIEAILVGGAEIYRNGERDPEKRVYPGGAFDPLGL 177
           AGKVEL +G+ YLG  +P S+T L+WIE ++VG  E  RN E DPEKR+YPGG FDPLGL
Sbjct: 169 AGKVELVEGSSYLGQPLPFSLTTLIWIEVLVVGYIEFQRNSELDPEKRIYPGGYFDPLGL 228

Query: 178 ASENDAKAFRLKTAEIKHGRLAMVAFLGFGVQALVTGQGALGSLAQFSN 324
           A++ + K   LK AEIKH RLAMVAFL F +QA  TG+G +  LA F+N
Sbjct: 229 AADPE-KLDTLKLAEIKHSRLAMVAFLIFALQAAFTGKGPVSFLATFNN 276