BLASTX nr result

ID: Akebia27_contig00009323 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Akebia27_contig00009323
         (316 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN81864.1| hypothetical protein VITISV_010591 [Vitis vinifera]    61   1e-07
ref|XP_003631250.1| PREDICTED: E3 ubiquitin-protein ligase AIP2-...    59   7e-07

>emb|CAN81864.1| hypothetical protein VITISV_010591 [Vitis vinifera]
          Length = 718

 Score = 61.2 bits (147), Expect = 1e-07
 Identities = 35/75 (46%), Positives = 46/75 (61%)
 Frame = +3

Query: 90  EKVTKMGLSHYPSAAEGMLPXXXXXXXXXXXLIKSVVRTVLQSMGYVENPPDLEEYRPNE 269
           E   KMGLS++ S AEG+LP           L+K++VR+VLQ MG   + P+LEE   NE
Sbjct: 464 EVFLKMGLSNFHSPAEGVLPVLVMNTVMSVALLKNMVRSVLQVMGANGSSPNLEEDPSNE 523

Query: 270 EEDVGSENMRERRIS 314
           E    SEN +ERR+S
Sbjct: 524 EYSPMSENAKERRVS 538


>ref|XP_003631250.1| PREDICTED: E3 ubiquitin-protein ligase AIP2-like [Vitis vinifera]
           gi|296081356|emb|CBI16789.3| unnamed protein product
           [Vitis vinifera]
          Length = 138

 Score = 58.9 bits (141), Expect = 7e-07
 Identities = 33/70 (47%), Positives = 44/70 (62%)
 Frame = +3

Query: 105 MGLSHYPSAAEGMLPXXXXXXXXXXXLIKSVVRTVLQSMGYVENPPDLEEYRPNEEEDVG 284
           MGLS++ S AEG+LP           L+K++VR+VLQ MG   + P+LEE   NEE    
Sbjct: 1   MGLSNFHSPAEGVLPVLVMNTVMSVALLKNMVRSVLQVMGANGSSPNLEEDPSNEEYSPM 60

Query: 285 SENMRERRIS 314
           SEN +ERR+S
Sbjct: 61  SENAKERRVS 70


Top