BLASTX nr result
ID: Akebia27_contig00008942
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Akebia27_contig00008942
(1268 letters)
Database: ./nr
38,876,450 sequences; 13,856,398,315 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|ABF17940.1| putative chloroplast chlorophyll a/b-binding prot... 125 3e-26
ref|XP_004145734.1| PREDICTED: chlorophyll a-b binding protein, ... 124 9e-26
gb|AGJ50622.1| chlorophyll a/b binding protein [Salicornia brach... 120 1e-24
gb|ABD38707.1| chloroplast chlorophyll a/b binding protein [Pach... 120 1e-24
emb|CAJ77390.1| major chlorophyll a/b binding protein LHCb1.2 [S... 119 3e-24
dbj|BAF95850.1| putative chloroplast chlorophyll a/b binding pro... 118 6e-24
ref|XP_002285646.1| PREDICTED: chlorophyll a-b binding protein 4... 118 6e-24
emb|CAX64458.1| major chlorophyll a/b binding protein LHCb1.4 pr... 117 1e-23
gb|AAA33396.1| light-harvesting chlorophyll a/b protein precurso... 116 2e-23
sp|P12333.1|CB2A_SPIOL RecName: Full=Chlorophyll a-b binding pro... 114 7e-23
ref|XP_007215816.1| hypothetical protein PRUPE_ppa010034mg [Prun... 114 7e-23
ref|XP_004234241.1| PREDICTED: uncharacterized protein LOC101245... 114 9e-23
ref|XP_004234063.1| PREDICTED: chlorophyll a-b binding protein 3... 114 9e-23
ref|XP_004234062.1| PREDICTED: chlorophyll a-b binding protein 3... 114 9e-23
ref|XP_004234058.1| PREDICTED: chlorophyll a-b binding protein 3... 114 9e-23
sp|P12329.1|CB21_MAIZE RecName: Full=Chlorophyll a-b binding pro... 114 9e-23
ref|NP_001147639.1| chlorophyll a-b binding protein 1, chloropla... 114 9e-23
ref|XP_004957570.1| PREDICTED: chlorophyll a-b binding protein 1... 113 2e-22
gb|AAB61237.1| chlorophyll a/b-binding protein [Mesembryanthemum... 113 2e-22
ref|XP_002460622.1| hypothetical protein SORBIDRAFT_02g032040 [S... 113 2e-22
>gb|ABF17940.1| putative chloroplast chlorophyll a/b-binding protein [Carya
cathayensis]
Length = 267
Score = 125 bits (315), Expect = 3e-26
Identities = 54/56 (96%), Positives = 56/56 (100%)
Frame = -1
Query: 170 ILGEGRVTMRKTAGRPKPISSGSPWYGPDRVKYLGPFSGEPPSYLTGEFPGDYGWD 3
+LGEGRVTMRKTAGRPKP+SSGSPWYGPDRVKYLGPFSGEPPSYLTGEFPGDYGWD
Sbjct: 27 LLGEGRVTMRKTAGRPKPVSSGSPWYGPDRVKYLGPFSGEPPSYLTGEFPGDYGWD 82
>ref|XP_004145734.1| PREDICTED: chlorophyll a-b binding protein, chloroplastic-like
[Cucumis sativus] gi|449525484|ref|XP_004169747.1|
PREDICTED: chlorophyll a-b binding protein,
chloroplastic-like [Cucumis sativus]
Length = 267
Score = 124 bits (311), Expect = 9e-26
Identities = 52/56 (92%), Positives = 56/56 (100%)
Frame = -1
Query: 170 ILGEGRVTMRKTAGRPKPISSGSPWYGPDRVKYLGPFSGEPPSYLTGEFPGDYGWD 3
+LGEGR+TMRKTAG+PKP+SSGSPWYGPDRVKYLGPFSGEPPSYLTGEFPGDYGWD
Sbjct: 27 LLGEGRITMRKTAGKPKPVSSGSPWYGPDRVKYLGPFSGEPPSYLTGEFPGDYGWD 82
>gb|AGJ50622.1| chlorophyll a/b binding protein [Salicornia brachiata]
Length = 267
Score = 120 bits (301), Expect = 1e-24
Identities = 52/58 (89%), Positives = 55/58 (94%)
Frame = -1
Query: 176 AHILGEGRVTMRKTAGRPKPISSGSPWYGPDRVKYLGPFSGEPPSYLTGEFPGDYGWD 3
A ILGEGRVTMRKTAG+PK ++SGSPWYGPDRVKYLGPFSGEPPSYLTGE PGDYGWD
Sbjct: 25 AEILGEGRVTMRKTAGKPKQVASGSPWYGPDRVKYLGPFSGEPPSYLTGELPGDYGWD 82
>gb|ABD38707.1| chloroplast chlorophyll a/b binding protein [Pachysandra
terminalis]
Length = 267
Score = 120 bits (301), Expect = 1e-24
Identities = 51/58 (87%), Positives = 55/58 (94%)
Frame = -1
Query: 176 AHILGEGRVTMRKTAGRPKPISSGSPWYGPDRVKYLGPFSGEPPSYLTGEFPGDYGWD 3
+ +LG GRV+MRKT GRPKP+SSGSPWYGPDRVKYLGPFSGEPPSYLTGEFPGDYGWD
Sbjct: 25 SELLGVGRVSMRKTGGRPKPVSSGSPWYGPDRVKYLGPFSGEPPSYLTGEFPGDYGWD 82
>emb|CAJ77390.1| major chlorophyll a/b binding protein LHCb1.2 [Spinacia oleracea]
Length = 267
Score = 119 bits (298), Expect = 3e-24
Identities = 52/58 (89%), Positives = 55/58 (94%)
Frame = -1
Query: 176 AHILGEGRVTMRKTAGRPKPISSGSPWYGPDRVKYLGPFSGEPPSYLTGEFPGDYGWD 3
+ ILGEGRVTMRKTAG+PK +SSGSPWYGPDRVKYLGPFSGE PSYLTGEFPGDYGWD
Sbjct: 25 SEILGEGRVTMRKTAGKPKNVSSGSPWYGPDRVKYLGPFSGEAPSYLTGEFPGDYGWD 82
>dbj|BAF95850.1| putative chloroplast chlorophyll a/b binding protein [Vitis hybrid
cultivar]
Length = 234
Score = 118 bits (295), Expect = 6e-24
Identities = 51/56 (91%), Positives = 53/56 (94%)
Frame = -1
Query: 170 ILGEGRVTMRKTAGRPKPISSGSPWYGPDRVKYLGPFSGEPPSYLTGEFPGDYGWD 3
+LGEGRVTMRKT GR KP+SSGSPWYG DRVKYLGPFSGEPPSYLTGEFPGDYGWD
Sbjct: 25 LLGEGRVTMRKTGGRAKPVSSGSPWYGTDRVKYLGPFSGEPPSYLTGEFPGDYGWD 80
>ref|XP_002285646.1| PREDICTED: chlorophyll a-b binding protein 40, chloroplastic [Vitis
vinifera] gi|147833686|emb|CAN73057.1| hypothetical
protein VITISV_007597 [Vitis vinifera]
Length = 267
Score = 118 bits (295), Expect = 6e-24
Identities = 51/56 (91%), Positives = 53/56 (94%)
Frame = -1
Query: 170 ILGEGRVTMRKTAGRPKPISSGSPWYGPDRVKYLGPFSGEPPSYLTGEFPGDYGWD 3
+LGEGRVTMRKT GR KP+SSGSPWYG DRVKYLGPFSGEPPSYLTGEFPGDYGWD
Sbjct: 27 LLGEGRVTMRKTGGRAKPVSSGSPWYGTDRVKYLGPFSGEPPSYLTGEFPGDYGWD 82
>emb|CAX64458.1| major chlorophyll a/b binding protein LHCb1.4 precursor [Spinacia
oleracea]
Length = 267
Score = 117 bits (292), Expect = 1e-23
Identities = 51/58 (87%), Positives = 54/58 (93%)
Frame = -1
Query: 176 AHILGEGRVTMRKTAGRPKPISSGSPWYGPDRVKYLGPFSGEPPSYLTGEFPGDYGWD 3
+ IL EGRVTMRKTAG+PK +SSGSPWYGPDRVKYLGPFSGE PSYLTGEFPGDYGWD
Sbjct: 25 SEILSEGRVTMRKTAGKPKNVSSGSPWYGPDRVKYLGPFSGEAPSYLTGEFPGDYGWD 82
>gb|AAA33396.1| light-harvesting chlorophyll a/b protein precursor [Lemna gibba]
Length = 266
Score = 116 bits (290), Expect = 2e-23
Identities = 49/58 (84%), Positives = 54/58 (93%)
Frame = -1
Query: 176 AHILGEGRVTMRKTAGRPKPISSGSPWYGPDRVKYLGPFSGEPPSYLTGEFPGDYGWD 3
+ + GEGRV+MRKTAG+PKP+SSGSPWYGPDRVKYLGPFSGE PSYLTGEF GDYGWD
Sbjct: 24 SEVFGEGRVSMRKTAGKPKPVSSGSPWYGPDRVKYLGPFSGEAPSYLTGEFAGDYGWD 81
>sp|P12333.1|CB2A_SPIOL RecName: Full=Chlorophyll a-b binding protein, chloroplastic;
AltName: Full=LHCII type I CAB; Short=LHCP; Flags:
Precursor gi|14240|emb|CAA32526.1| chlorophyll a/b
binding protein precursor [Spinacia oleracea]
gi|193783447|emb|CAJ77389.3| major chlorophyll a/b
binding protein LHCb1.3 [Spinacia oleracea]
Length = 267
Score = 114 bits (286), Expect = 7e-23
Identities = 48/58 (82%), Positives = 53/58 (91%)
Frame = -1
Query: 176 AHILGEGRVTMRKTAGRPKPISSGSPWYGPDRVKYLGPFSGEPPSYLTGEFPGDYGWD 3
+ I+GEGR+TMRKTAG+PK + S SPWYGPDRVKYLGPFSGE PSYLTGEFPGDYGWD
Sbjct: 25 SEIIGEGRITMRKTAGKPKTVQSSSPWYGPDRVKYLGPFSGESPSYLTGEFPGDYGWD 82
>ref|XP_007215816.1| hypothetical protein PRUPE_ppa010034mg [Prunus persica]
gi|462411966|gb|EMJ17015.1| hypothetical protein
PRUPE_ppa010034mg [Prunus persica]
Length = 267
Score = 114 bits (286), Expect = 7e-23
Identities = 50/59 (84%), Positives = 55/59 (93%)
Frame = -1
Query: 179 LAHILGEGRVTMRKTAGRPKPISSGSPWYGPDRVKYLGPFSGEPPSYLTGEFPGDYGWD 3
+++I+GEGRVTMRKTA R K +SSGSPWYGPDRVKYLGPFSGE PSYLTGEFPGDYGWD
Sbjct: 24 VSNIVGEGRVTMRKTASRSKNVSSGSPWYGPDRVKYLGPFSGEAPSYLTGEFPGDYGWD 82
>ref|XP_004234241.1| PREDICTED: uncharacterized protein LOC101245729 [Solanum
lycopersicum]
Length = 554
Score = 114 bits (285), Expect = 9e-23
Identities = 49/58 (84%), Positives = 52/58 (89%)
Frame = -1
Query: 176 AHILGEGRVTMRKTAGRPKPISSGSPWYGPDRVKYLGPFSGEPPSYLTGEFPGDYGWD 3
+ I G GR+TMRKTA +PKP SSGSPWYGPDRVKYLGPFSGE PSYLTGEFPGDYGWD
Sbjct: 25 SEISGNGRITMRKTAAKPKPASSGSPWYGPDRVKYLGPFSGESPSYLTGEFPGDYGWD 82
Score = 111 bits (277), Expect = 8e-22
Identities = 49/58 (84%), Positives = 51/58 (87%)
Frame = -1
Query: 176 AHILGEGRVTMRKTAGRPKPISSGSPWYGPDRVKYLGPFSGEPPSYLTGEFPGDYGWD 3
+ I G GRVTMRKTA + KP SSGSPWYGPDRVKYLGPFSGE PSYLTGEFPGDYGWD
Sbjct: 312 SEITGNGRVTMRKTATKAKPASSGSPWYGPDRVKYLGPFSGESPSYLTGEFPGDYGWD 369
>ref|XP_004234063.1| PREDICTED: chlorophyll a-b binding protein 3C, chloroplastic-like
isoform 6 [Solanum lycopersicum]
Length = 244
Score = 114 bits (285), Expect = 9e-23
Identities = 49/58 (84%), Positives = 52/58 (89%)
Frame = -1
Query: 176 AHILGEGRVTMRKTAGRPKPISSGSPWYGPDRVKYLGPFSGEPPSYLTGEFPGDYGWD 3
+ I G GR+TMRKTA +PKP SSGSPWYGPDRVKYLGPFSGE PSYLTGEFPGDYGWD
Sbjct: 25 SEISGNGRITMRKTAAKPKPASSGSPWYGPDRVKYLGPFSGESPSYLTGEFPGDYGWD 82
>ref|XP_004234062.1| PREDICTED: chlorophyll a-b binding protein 3C, chloroplastic-like
isoform 5 [Solanum lycopersicum]
Length = 255
Score = 114 bits (285), Expect = 9e-23
Identities = 49/58 (84%), Positives = 52/58 (89%)
Frame = -1
Query: 176 AHILGEGRVTMRKTAGRPKPISSGSPWYGPDRVKYLGPFSGEPPSYLTGEFPGDYGWD 3
+ I G GR+TMRKTA +PKP SSGSPWYGPDRVKYLGPFSGE PSYLTGEFPGDYGWD
Sbjct: 25 SEISGNGRITMRKTAAKPKPASSGSPWYGPDRVKYLGPFSGESPSYLTGEFPGDYGWD 82
>ref|XP_004234058.1| PREDICTED: chlorophyll a-b binding protein 3C, chloroplastic-like
isoform 1 [Solanum lycopersicum]
gi|460376546|ref|XP_004234059.1| PREDICTED: chlorophyll
a-b binding protein 3C, chloroplastic-like isoform 2
[Solanum lycopersicum] gi|460376548|ref|XP_004234060.1|
PREDICTED: chlorophyll a-b binding protein 3C,
chloroplastic-like isoform 3 [Solanum lycopersicum]
gi|460376550|ref|XP_004234061.1| PREDICTED: chlorophyll
a-b binding protein 3C, chloroplastic-like isoform 4
[Solanum lycopersicum]
Length = 267
Score = 114 bits (285), Expect = 9e-23
Identities = 49/58 (84%), Positives = 52/58 (89%)
Frame = -1
Query: 176 AHILGEGRVTMRKTAGRPKPISSGSPWYGPDRVKYLGPFSGEPPSYLTGEFPGDYGWD 3
+ I G GR+TMRKTA +PKP SSGSPWYGPDRVKYLGPFSGE PSYLTGEFPGDYGWD
Sbjct: 25 SEISGNGRITMRKTAAKPKPASSGSPWYGPDRVKYLGPFSGESPSYLTGEFPGDYGWD 82
>sp|P12329.1|CB21_MAIZE RecName: Full=Chlorophyll a-b binding protein 1, chloroplastic;
AltName: Full=LHCII type I CAB-1; Short=LHCP; Flags:
Precursor gi|22224|emb|CAA32900.1| unnamed protein
product [Zea mays] gi|194699340|gb|ACF83754.1| unknown
[Zea mays] gi|195607416|gb|ACG25538.1| chlorophyll a-b
binding protein 2 [Zea mays] gi|195613460|gb|ACG28560.1|
chlorophyll a-b binding protein 2 [Zea mays]
gi|414886622|tpg|DAA62636.1| TPA: light harvesting
chlorophyll a/b binding protein2 [Zea mays]
Length = 262
Score = 114 bits (285), Expect = 9e-23
Identities = 48/54 (88%), Positives = 51/54 (94%)
Frame = -1
Query: 164 GEGRVTMRKTAGRPKPISSGSPWYGPDRVKYLGPFSGEPPSYLTGEFPGDYGWD 3
GEGR+TMRKT G+PK +SGSPWYGPDRVKYLGPFSGEPPSYLTGEFPGDYGWD
Sbjct: 24 GEGRITMRKTVGKPKVAASGSPWYGPDRVKYLGPFSGEPPSYLTGEFPGDYGWD 77
>ref|NP_001147639.1| chlorophyll a-b binding protein 1, chloroplastic precursor [Zea
mays] gi|195612774|gb|ACG28217.1| chlorophyll a-b
binding protein 2 [Zea mays]
Length = 262
Score = 114 bits (285), Expect = 9e-23
Identities = 48/54 (88%), Positives = 51/54 (94%)
Frame = -1
Query: 164 GEGRVTMRKTAGRPKPISSGSPWYGPDRVKYLGPFSGEPPSYLTGEFPGDYGWD 3
GEGR+TMRKT G+PK +SGSPWYGPDRVKYLGPFSGEPPSYLTGEFPGDYGWD
Sbjct: 24 GEGRITMRKTVGKPKVAASGSPWYGPDRVKYLGPFSGEPPSYLTGEFPGDYGWD 77
>ref|XP_004957570.1| PREDICTED: chlorophyll a-b binding protein 1, chloroplastic-like
[Setaria italica]
Length = 261
Score = 113 bits (283), Expect = 2e-22
Identities = 48/54 (88%), Positives = 51/54 (94%)
Frame = -1
Query: 164 GEGRVTMRKTAGRPKPISSGSPWYGPDRVKYLGPFSGEPPSYLTGEFPGDYGWD 3
GEGR+TMRKTA +PK +SGSPWYGPDRVKYLGPFSGEPPSYLTGEFPGDYGWD
Sbjct: 23 GEGRITMRKTAAKPKVAASGSPWYGPDRVKYLGPFSGEPPSYLTGEFPGDYGWD 76
>gb|AAB61237.1| chlorophyll a/b-binding protein [Mesembryanthemum crystallinum]
Length = 267
Score = 113 bits (283), Expect = 2e-22
Identities = 49/58 (84%), Positives = 53/58 (91%)
Frame = -1
Query: 176 AHILGEGRVTMRKTAGRPKPISSGSPWYGPDRVKYLGPFSGEPPSYLTGEFPGDYGWD 3
+ ILGEGR+TMRKTAG+ K +SS SPWYGPDRVKYLGPFSGE PSYLTGEFPGDYGWD
Sbjct: 25 SEILGEGRITMRKTAGKTKSVSSDSPWYGPDRVKYLGPFSGESPSYLTGEFPGDYGWD 82
>ref|XP_002460622.1| hypothetical protein SORBIDRAFT_02g032040 [Sorghum bicolor]
gi|241923999|gb|EER97143.1| hypothetical protein
SORBIDRAFT_02g032040 [Sorghum bicolor]
Length = 262
Score = 113 bits (283), Expect = 2e-22
Identities = 48/54 (88%), Positives = 51/54 (94%)
Frame = -1
Query: 164 GEGRVTMRKTAGRPKPISSGSPWYGPDRVKYLGPFSGEPPSYLTGEFPGDYGWD 3
GEGR+TMRKTA +PK +SGSPWYGPDRVKYLGPFSGEPPSYLTGEFPGDYGWD
Sbjct: 24 GEGRITMRKTAAKPKVAASGSPWYGPDRVKYLGPFSGEPPSYLTGEFPGDYGWD 77