BLASTX nr result
ID: Akebia27_contig00008458
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Akebia27_contig00008458
(2132 letters)
Database: ./nr
38,876,450 sequences; 13,856,398,315 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002274051.1| PREDICTED: DNA-directed RNA polymerase II su... 1310 0.0
gb|AAZ08457.1| RNA polymerase II second largest subunit [Rhodode... 1288 0.0
ref|XP_007025631.1| DNA-directed RNA polymerase family protein i... 1279 0.0
ref|XP_002519060.1| DNA-directed RNA polymerase II subunit, puta... 1278 0.0
gb|EYU43393.1| hypothetical protein MIMGU_mgv1a000385mg [Mimulus... 1277 0.0
ref|XP_004134705.1| PREDICTED: DNA-directed RNA polymerase II su... 1277 0.0
gb|EXC18122.1| DNA-directed RNA polymerase II subunit [Morus not... 1273 0.0
ref|XP_006347043.1| PREDICTED: DNA-directed RNA polymerase II su... 1272 0.0
ref|XP_006859038.1| hypothetical protein AMTR_s00068p00181410 [A... 1271 0.0
ref|XP_006487405.1| PREDICTED: DNA-directed RNA polymerase II su... 1269 0.0
ref|XP_006423594.1| hypothetical protein CICLE_v10027701mg [Citr... 1269 0.0
ref|NP_001233889.1| DNA-directed RNA polymerase II subunit RPB2 ... 1269 0.0
ref|XP_004499217.1| PREDICTED: DNA-directed RNA polymerase II su... 1267 0.0
ref|XP_007148168.1| hypothetical protein PHAVU_006G185800g [Phas... 1266 0.0
ref|XP_003533774.1| PREDICTED: DNA-directed RNA polymerase II su... 1266 0.0
ref|XP_007138707.1| hypothetical protein PHAVU_009G230400g [Phas... 1265 0.0
ref|XP_003547482.1| PREDICTED: DNA-directed RNA polymerase II su... 1264 0.0
ref|XP_007214559.1| hypothetical protein PRUPE_ppa000425mg [Prun... 1264 0.0
ref|XP_003589372.1| DNA-directed RNA polymerase [Medicago trunca... 1264 0.0
gb|AAY89348.1| RNA polymerase II second largest subunit [Antirrh... 1263 0.0
>ref|XP_002274051.1| PREDICTED: DNA-directed RNA polymerase II subunit RPB2 [Vitis
vinifera] gi|147841183|emb|CAN72948.1| hypothetical
protein VITISV_033708 [Vitis vinifera]
gi|302143287|emb|CBI21848.3| unnamed protein product
[Vitis vinifera]
Length = 1193
Score = 1310 bits (3390), Expect = 0.0
Identities = 654/680 (96%), Positives = 666/680 (97%), Gaps = 4/680 (0%)
Frame = +1
Query: 103 MYGGDEYDPSVNEDEED----ITQEDAWAVISAYFEEKGLVRQQLDSFDEFIQNTMQEIV 270
MYG DEYDP+V E+EED ITQEDAWAVISAYFEEKGLVRQQLDSFDEFIQNTMQEIV
Sbjct: 1 MYGEDEYDPTVVEEEEDDDEEITQEDAWAVISAYFEEKGLVRQQLDSFDEFIQNTMQEIV 60
Query: 271 DESADIEIRPESQHNPGRQPDFLETIYKISFGQIYLSKPMMTESDGETATLFPKAARLRN 450
DESADIEIRPESQHNPGRQ DFLETIYKISFGQIYLSKPMMTESDGETATLFPKAARLRN
Sbjct: 61 DESADIEIRPESQHNPGRQSDFLETIYKISFGQIYLSKPMMTESDGETATLFPKAARLRN 120
Query: 451 LTYSAPLYVDVTKRIIKKGHDCEEVTETQEFTKVFIGKVPIMLRSSYCTLYQNSEKDLTE 630
LTYSAPLYVDVTKRIIKKGHD EEVTETQEFTKVFIGKVPIMLRSSYCT+YQNSEKDLTE
Sbjct: 121 LTYSAPLYVDVTKRIIKKGHDLEEVTETQEFTKVFIGKVPIMLRSSYCTVYQNSEKDLTE 180
Query: 631 LGECPYDQGGYFIINGSEKVLIAQEKMSTNHVYVFKKRQPNKYAYVGEVRSMAESQNRPP 810
LGECPYDQGGYFIINGSEKVLIAQEKMSTNHVYVFKKRQPNKYAYV EVRSMAESQNRPP
Sbjct: 181 LGECPYDQGGYFIINGSEKVLIAQEKMSTNHVYVFKKRQPNKYAYVAEVRSMAESQNRPP 240
Query: 811 SSMFVRMLSRASAKGGSSGQYIRATLPYIRTEIPIIIVFRALGFVADKDILEHICYDFAD 990
SSMFVRMLSR SAKGGSSGQYIRATLPYIRTEIPIIIVFRALGFVADKDILEHICYDF+D
Sbjct: 241 SSMFVRMLSRTSAKGGSSGQYIRATLPYIRTEIPIIIVFRALGFVADKDILEHICYDFSD 300
Query: 991 TQMMELLRPSLEEAFVIQNQQVALDYIGKRGSTVGVTREKRIKYAKEILQKEMLPHVGVE 1170
TQMMELLRPSLEEAFVIQNQQVALDYIGKRGSTVGVTREKRIKYAKEILQKEMLPHVGV
Sbjct: 301 TQMMELLRPSLEEAFVIQNQQVALDYIGKRGSTVGVTREKRIKYAKEILQKEMLPHVGVG 360
Query: 1171 EYCETKKAYYFGYIIHRLLLCALGRRPEDDRDHYGNKRLDLAGPLLGGLFRMLFRKLTRD 1350
EYCETKKAYYFGYIIHRLLLCALGRRPEDDRDHYGNKRLDLAGPLLGGLFRMLFRKLTRD
Sbjct: 361 EYCETKKAYYFGYIIHRLLLCALGRRPEDDRDHYGNKRLDLAGPLLGGLFRMLFRKLTRD 420
Query: 1351 VRGYVQKCVDNGKDVNLQFAIKAKTITSGLKYSLATGNWGQANAAGTRAGVSQVLNRLTY 1530
VR YVQKCVDNGKDVNLQFAIKAKTITSGLKYSLATGNWGQANAAGTRAGVSQVLNRLTY
Sbjct: 421 VRAYVQKCVDNGKDVNLQFAIKAKTITSGLKYSLATGNWGQANAAGTRAGVSQVLNRLTY 480
Query: 1531 ASTLSHLRRLNSPIGREGKLAKPRQLHNSHWGMMCPAETPEGQACGLVKNLALMVYITVG 1710
ASTLSHLRRLNSPIGREGKLAKPRQLHNSHWGMMCPAETPEGQACGLVKNLALMVYITVG
Sbjct: 481 ASTLSHLRRLNSPIGREGKLAKPRQLHNSHWGMMCPAETPEGQACGLVKNLALMVYITVG 540
Query: 1711 SAARPILEFLEEWSTENFEEISPAVIPQATKIFVNGCWVGIHRNPELLVKTLRQLRRQVD 1890
SAA PILEFLEEWSTENFEEISPAVIPQ+TKIFVNGCWVGIHRNP+LLVKTLRQLRRQVD
Sbjct: 541 SAANPILEFLEEWSTENFEEISPAVIPQSTKIFVNGCWVGIHRNPDLLVKTLRQLRRQVD 600
Query: 1891 VNTEVGVIRDIRLKELRLYTDYGRCSRPLFIVEKQQLLIKKKDIRALQQRETPEEGGWHE 2070
VNTEVGVIRDIRLKELRLYTDYGRCSRPLFIVEKQ+LLIKK+DIRALQ RE+PE+GGWH+
Sbjct: 601 VNTEVGVIRDIRLKELRLYTDYGRCSRPLFIVEKQRLLIKKRDIRALQLRESPEDGGWHD 660
Query: 2071 LVAKGFIEYVDTEEEETTMI 2130
LV+KGFIEYVDTEEEETTMI
Sbjct: 661 LVSKGFIEYVDTEEEETTMI 680
>gb|AAZ08457.1| RNA polymerase II second largest subunit [Rhododendron macrophyllum]
Length = 1191
Score = 1288 bits (3334), Expect = 0.0
Identities = 635/672 (94%), Positives = 660/672 (98%)
Frame = +1
Query: 115 DEYDPSVNEDEEDITQEDAWAVISAYFEEKGLVRQQLDSFDEFIQNTMQEIVDESADIEI 294
+EYDP++ ++EE+ITQEDAWAVISAYFEEKGLVRQQLDSFDEFIQNTMQEIVDESADIEI
Sbjct: 7 EEYDPTMEDEEEEITQEDAWAVISAYFEEKGLVRQQLDSFDEFIQNTMQEIVDESADIEI 66
Query: 295 RPESQHNPGRQPDFLETIYKISFGQIYLSKPMMTESDGETATLFPKAARLRNLTYSAPLY 474
RPESQHNPG Q DF ETIYKISFGQIYLSKPMMTESDGETATLFPKAARLRNLTYSAPLY
Sbjct: 67 RPESQHNPGHQSDFAETIYKISFGQIYLSKPMMTESDGETATLFPKAARLRNLTYSAPLY 126
Query: 475 VDVTKRIIKKGHDCEEVTETQEFTKVFIGKVPIMLRSSYCTLYQNSEKDLTELGECPYDQ 654
VDVTKR+IKKGHD EEVTETQ+FTKVFIGKVPIMLRSSYCTLYQNSEKDLTELGECPYDQ
Sbjct: 127 VDVTKRVIKKGHDGEEVTETQDFTKVFIGKVPIMLRSSYCTLYQNSEKDLTELGECPYDQ 186
Query: 655 GGYFIINGSEKVLIAQEKMSTNHVYVFKKRQPNKYAYVGEVRSMAESQNRPPSSMFVRML 834
GGYFIINGSEKVLIAQEKMSTNHVYVFKKRQPNKYAYV EVRSMAESQNRPPS+MFVRML
Sbjct: 187 GGYFIINGSEKVLIAQEKMSTNHVYVFKKRQPNKYAYVAEVRSMAESQNRPPSTMFVRML 246
Query: 835 SRASAKGGSSGQYIRATLPYIRTEIPIIIVFRALGFVADKDILEHICYDFADTQMMELLR 1014
SR SAKGGSSGQYIRATLPYIRTEIPIIIVFRALGFVADKDILEHICYDFADTQMMELLR
Sbjct: 247 SRTSAKGGSSGQYIRATLPYIRTEIPIIIVFRALGFVADKDILEHICYDFADTQMMELLR 306
Query: 1015 PSLEEAFVIQNQQVALDYIGKRGSTVGVTREKRIKYAKEILQKEMLPHVGVEEYCETKKA 1194
PSLEEAFVIQNQQVALDYIGKRG+TVGVT+EKRIKYAKEILQKEMLPHVGV EYCETKKA
Sbjct: 307 PSLEEAFVIQNQQVALDYIGKRGATVGVTKEKRIKYAKEILQKEMLPHVGVGEYCETKKA 366
Query: 1195 YYFGYIIHRLLLCALGRRPEDDRDHYGNKRLDLAGPLLGGLFRMLFRKLTRDVRGYVQKC 1374
YYFGYIIHRLLLCALGRR EDDRDHYGNKRLDLAGPLLGGLFRMLFRKLTRDVRGYVQKC
Sbjct: 367 YYFGYIIHRLLLCALGRRAEDDRDHYGNKRLDLAGPLLGGLFRMLFRKLTRDVRGYVQKC 426
Query: 1375 VDNGKDVNLQFAIKAKTITSGLKYSLATGNWGQANAAGTRAGVSQVLNRLTYASTLSHLR 1554
VDNGKDVNLQFAIKAKTITSGLKYSLATGNWGQANAAGTRAGVSQVLNRLTYASTLSHLR
Sbjct: 427 VDNGKDVNLQFAIKAKTITSGLKYSLATGNWGQANAAGTRAGVSQVLNRLTYASTLSHLR 486
Query: 1555 RLNSPIGREGKLAKPRQLHNSHWGMMCPAETPEGQACGLVKNLALMVYITVGSAARPILE 1734
RLNSPIGREGKLAKPRQLHNS WGMMCPAETPEGQACGLVKNLALMVYITVGSAA PILE
Sbjct: 487 RLNSPIGREGKLAKPRQLHNSQWGMMCPAETPEGQACGLVKNLALMVYITVGSAAYPILE 546
Query: 1735 FLEEWSTENFEEISPAVIPQATKIFVNGCWVGIHRNPELLVKTLRQLRRQVDVNTEVGVI 1914
FLEEW TENFEEISPAVIPQATKIFVNGCWVGIHR+P++LV+TLR+LRR+VDVNTEVGV+
Sbjct: 547 FLEEWGTENFEEISPAVIPQATKIFVNGCWVGIHRDPDMLVRTLRRLRRRVDVNTEVGVV 606
Query: 1915 RDIRLKELRLYTDYGRCSRPLFIVEKQQLLIKKKDIRALQQRETPEEGGWHELVAKGFIE 2094
RDIRLKELR+YTDYGRCSRPLFIVEKQ+LLIK+KDI+ALQQRETPE+GGWH+LVAKGFIE
Sbjct: 607 RDIRLKELRIYTDYGRCSRPLFIVEKQRLLIKRKDIQALQQRETPEDGGWHDLVAKGFIE 666
Query: 2095 YVDTEEEETTMI 2130
Y+DTEEEETTMI
Sbjct: 667 YIDTEEEETTMI 678
>ref|XP_007025631.1| DNA-directed RNA polymerase family protein isoform 1 [Theobroma
cacao] gi|508780997|gb|EOY28253.1| DNA-directed RNA
polymerase family protein isoform 1 [Theobroma cacao]
Length = 1189
Score = 1279 bits (3310), Expect = 0.0
Identities = 634/678 (93%), Positives = 657/678 (96%), Gaps = 2/678 (0%)
Frame = +1
Query: 103 MYGGDEYDPSV--NEDEEDITQEDAWAVISAYFEEKGLVRQQLDSFDEFIQNTMQEIVDE 276
M EYDP + +ED+E+ITQEDAWAVISAYFEEKGLVRQQLDSFDEFIQNTMQEIVDE
Sbjct: 1 MEDDSEYDPQLMDDEDDEEITQEDAWAVISAYFEEKGLVRQQLDSFDEFIQNTMQEIVDE 60
Query: 277 SADIEIRPESQHNPGRQPDFLETIYKISFGQIYLSKPMMTESDGETATLFPKAARLRNLT 456
SADIEIRPESQHNPG Q DF ETIYKISFGQIYLSKPMMTESDGETATLFPKAARLRNLT
Sbjct: 61 SADIEIRPESQHNPGHQSDFAETIYKISFGQIYLSKPMMTESDGETATLFPKAARLRNLT 120
Query: 457 YSAPLYVDVTKRIIKKGHDCEEVTETQEFTKVFIGKVPIMLRSSYCTLYQNSEKDLTELG 636
YSAPLYVDVTKR+IKKGHD EEVTETQ+FTKVFIGKVPIMLRSSYCTLYQNSEKDLTELG
Sbjct: 121 YSAPLYVDVTKRVIKKGHDGEEVTETQDFTKVFIGKVPIMLRSSYCTLYQNSEKDLTELG 180
Query: 637 ECPYDQGGYFIINGSEKVLIAQEKMSTNHVYVFKKRQPNKYAYVGEVRSMAESQNRPPSS 816
ECPYDQGGYFIINGSEKVLIAQEKMSTNHVYVFKKRQPNKYAYV EVRSMAESQNRPPS+
Sbjct: 181 ECPYDQGGYFIINGSEKVLIAQEKMSTNHVYVFKKRQPNKYAYVAEVRSMAESQNRPPST 240
Query: 817 MFVRMLSRASAKGGSSGQYIRATLPYIRTEIPIIIVFRALGFVADKDILEHICYDFADTQ 996
MFVRMLSR SAKGGSSGQYIRATLPYIRTEIPIIIVFRALGFVADKDILEHICYDF+DTQ
Sbjct: 241 MFVRMLSRTSAKGGSSGQYIRATLPYIRTEIPIIIVFRALGFVADKDILEHICYDFSDTQ 300
Query: 997 MMELLRPSLEEAFVIQNQQVALDYIGKRGSTVGVTREKRIKYAKEILQKEMLPHVGVEEY 1176
MMELLRPSLEEAFVIQNQQVALDYIGKRG+TVGVTREKRIKYAKEILQKEMLPHVGV ++
Sbjct: 301 MMELLRPSLEEAFVIQNQQVALDYIGKRGATVGVTREKRIKYAKEILQKEMLPHVGVGDF 360
Query: 1177 CETKKAYYFGYIIHRLLLCALGRRPEDDRDHYGNKRLDLAGPLLGGLFRMLFRKLTRDVR 1356
CETKKAYYFGYIIHRLLLCALGRR EDDRDHYGNKRLDLAGPLLGGLFRMLFRKLTRDVR
Sbjct: 361 CETKKAYYFGYIIHRLLLCALGRRAEDDRDHYGNKRLDLAGPLLGGLFRMLFRKLTRDVR 420
Query: 1357 GYVQKCVDNGKDVNLQFAIKAKTITSGLKYSLATGNWGQANAAGTRAGVSQVLNRLTYAS 1536
YVQKCVDNGKDVNLQFAIKAKTITSGLKYSLATGNWGQANAAGTRAGVSQVLNRLTYAS
Sbjct: 421 SYVQKCVDNGKDVNLQFAIKAKTITSGLKYSLATGNWGQANAAGTRAGVSQVLNRLTYAS 480
Query: 1537 TLSHLRRLNSPIGREGKLAKPRQLHNSHWGMMCPAETPEGQACGLVKNLALMVYITVGSA 1716
TLSHLRRLNSPIGREGKLAKPRQLHNS WGMMCPAETPEGQACGLVKNLALMVYITVGSA
Sbjct: 481 TLSHLRRLNSPIGREGKLAKPRQLHNSQWGMMCPAETPEGQACGLVKNLALMVYITVGSA 540
Query: 1717 ARPILEFLEEWSTENFEEISPAVIPQATKIFVNGCWVGIHRNPELLVKTLRQLRRQVDVN 1896
A PILEFLEEW TENFEEISPAVIPQATKIFVNGCWVG+HRNP++LV TLR+LRR+VDVN
Sbjct: 541 AYPILEFLEEWGTENFEEISPAVIPQATKIFVNGCWVGVHRNPDMLVTTLRRLRRRVDVN 600
Query: 1897 TEVGVIRDIRLKELRLYTDYGRCSRPLFIVEKQQLLIKKKDIRALQQRETPEEGGWHELV 2076
TEVGV+RDIRLKELR+YTDYGRCSRPLFIVEKQ+LLIKKKDI ALQQRE+PE+GGWH+LV
Sbjct: 601 TEVGVVRDIRLKELRIYTDYGRCSRPLFIVEKQRLLIKKKDIHALQQRESPEDGGWHDLV 660
Query: 2077 AKGFIEYVDTEEEETTMI 2130
AKGFIEY+DTEEEETTMI
Sbjct: 661 AKGFIEYIDTEEEETTMI 678
>ref|XP_002519060.1| DNA-directed RNA polymerase II subunit, putative [Ricinus communis]
gi|223541723|gb|EEF43271.1| DNA-directed RNA polymerase
II subunit, putative [Ricinus communis]
Length = 1194
Score = 1278 bits (3306), Expect = 0.0
Identities = 637/681 (93%), Positives = 656/681 (96%), Gaps = 5/681 (0%)
Frame = +1
Query: 103 MYGGDEYDPSVNEDEED-----ITQEDAWAVISAYFEEKGLVRQQLDSFDEFIQNTMQEI 267
M EYD ++NED ED ITQEDAWAVISAYFEEKGLVRQQLDSFDEFIQNTMQEI
Sbjct: 1 MEDDQEYDQNLNEDYEDEDEDEITQEDAWAVISAYFEEKGLVRQQLDSFDEFIQNTMQEI 60
Query: 268 VDESADIEIRPESQHNPGRQPDFLETIYKISFGQIYLSKPMMTESDGETATLFPKAARLR 447
VDESADIEIRPESQHNPG Q DF ETIYKISFGQIYLSKPMMTESDGETATLFPKAARLR
Sbjct: 61 VDESADIEIRPESQHNPGHQSDFAETIYKISFGQIYLSKPMMTESDGETATLFPKAARLR 120
Query: 448 NLTYSAPLYVDVTKRIIKKGHDCEEVTETQEFTKVFIGKVPIMLRSSYCTLYQNSEKDLT 627
NLTYSAPLYVDVTKR+IKKGHD EEVTETQ+FTKVFIGKVPIMLRSSYCTLYQNSEKDLT
Sbjct: 121 NLTYSAPLYVDVTKRVIKKGHDGEEVTETQDFTKVFIGKVPIMLRSSYCTLYQNSEKDLT 180
Query: 628 ELGECPYDQGGYFIINGSEKVLIAQEKMSTNHVYVFKKRQPNKYAYVGEVRSMAESQNRP 807
ELGECPYDQGGYFIINGSEKVLIAQEKMSTNHVYVFKKRQPNKYAYV EVRSMAESQNRP
Sbjct: 181 ELGECPYDQGGYFIINGSEKVLIAQEKMSTNHVYVFKKRQPNKYAYVAEVRSMAESQNRP 240
Query: 808 PSSMFVRMLSRASAKGGSSGQYIRATLPYIRTEIPIIIVFRALGFVADKDILEHICYDFA 987
PS+MFVRMLSR SAKGGSSGQYIRATLPYIRTEIPIIIVFRALGFVADKDILEHICYDF+
Sbjct: 241 PSTMFVRMLSRTSAKGGSSGQYIRATLPYIRTEIPIIIVFRALGFVADKDILEHICYDFS 300
Query: 988 DTQMMELLRPSLEEAFVIQNQQVALDYIGKRGSTVGVTREKRIKYAKEILQKEMLPHVGV 1167
DTQMMELLRPSLEEAFVIQNQQVALDYIGKRG+TVGVT+EKRIKYAKEILQKEMLPHVGV
Sbjct: 301 DTQMMELLRPSLEEAFVIQNQQVALDYIGKRGATVGVTKEKRIKYAKEILQKEMLPHVGV 360
Query: 1168 EEYCETKKAYYFGYIIHRLLLCALGRRPEDDRDHYGNKRLDLAGPLLGGLFRMLFRKLTR 1347
EYCETKKAYYFGYIIHRLLLCALGRR EDDRDHYGNKRLDLAGPLLGGLFRMLFRKLTR
Sbjct: 361 GEYCETKKAYYFGYIIHRLLLCALGRRAEDDRDHYGNKRLDLAGPLLGGLFRMLFRKLTR 420
Query: 1348 DVRGYVQKCVDNGKDVNLQFAIKAKTITSGLKYSLATGNWGQANAAGTRAGVSQVLNRLT 1527
DVR YVQKCVDNGKDVNLQFAIKAKTITSGLKYSLATGNWGQANAAGTRAGVSQVLNRLT
Sbjct: 421 DVRSYVQKCVDNGKDVNLQFAIKAKTITSGLKYSLATGNWGQANAAGTRAGVSQVLNRLT 480
Query: 1528 YASTLSHLRRLNSPIGREGKLAKPRQLHNSHWGMMCPAETPEGQACGLVKNLALMVYITV 1707
YASTLSHLRRLNSPIGREGKLAKPRQLHNS WGMMCPAETPEGQACGLVKNLALMVYITV
Sbjct: 481 YASTLSHLRRLNSPIGREGKLAKPRQLHNSQWGMMCPAETPEGQACGLVKNLALMVYITV 540
Query: 1708 GSAARPILEFLEEWSTENFEEISPAVIPQATKIFVNGCWVGIHRNPELLVKTLRQLRRQV 1887
GSAA PILEFLEEW TENFEEISPAVIPQATKIFVNGCWVGIHR+P++LVKTLR+LRR+V
Sbjct: 541 GSAAYPILEFLEEWGTENFEEISPAVIPQATKIFVNGCWVGIHRDPDMLVKTLRRLRRRV 600
Query: 1888 DVNTEVGVIRDIRLKELRLYTDYGRCSRPLFIVEKQQLLIKKKDIRALQQRETPEEGGWH 2067
DVNTEVGV+RDIRLKELR+YTDYGRCSRPLFIVEKQ+LLIKKKDI ALQQRE+ EEGGWH
Sbjct: 601 DVNTEVGVVRDIRLKELRIYTDYGRCSRPLFIVEKQRLLIKKKDIHALQQRESSEEGGWH 660
Query: 2068 ELVAKGFIEYVDTEEEETTMI 2130
+LVAKGFIEY+DTEEEETTMI
Sbjct: 661 DLVAKGFIEYIDTEEEETTMI 681
>gb|EYU43393.1| hypothetical protein MIMGU_mgv1a000385mg [Mimulus guttatus]
Length = 1197
Score = 1277 bits (3305), Expect = 0.0
Identities = 631/680 (92%), Positives = 660/680 (97%)
Frame = +1
Query: 91 FLEKMYGGDEYDPSVNEDEEDITQEDAWAVISAYFEEKGLVRQQLDSFDEFIQNTMQEIV 270
F E+ Y +E++ EDEE+ITQEDAWAVISAYFEEKGLVRQQLDSFDEFIQNTMQEIV
Sbjct: 7 FYEQGYPDEEFE---EEDEEEITQEDAWAVISAYFEEKGLVRQQLDSFDEFIQNTMQEIV 63
Query: 271 DESADIEIRPESQHNPGRQPDFLETIYKISFGQIYLSKPMMTESDGETATLFPKAARLRN 450
DESADIEIRPESQHNPG QPDF ETIYKISFGQIYLSKPMMTESDGETATLFPKAARLRN
Sbjct: 64 DESADIEIRPESQHNPGHQPDFAETIYKISFGQIYLSKPMMTESDGETATLFPKAARLRN 123
Query: 451 LTYSAPLYVDVTKRIIKKGHDCEEVTETQEFTKVFIGKVPIMLRSSYCTLYQNSEKDLTE 630
LTYSAPLYVDVTKR+IKKGHD EEVTETQ+FTKVFIGKVPIMLRSSYCTLYQNSEKDLTE
Sbjct: 124 LTYSAPLYVDVTKRVIKKGHDGEEVTETQDFTKVFIGKVPIMLRSSYCTLYQNSEKDLTE 183
Query: 631 LGECPYDQGGYFIINGSEKVLIAQEKMSTNHVYVFKKRQPNKYAYVGEVRSMAESQNRPP 810
LGECPYDQGGYFIINGSEKVLIAQEKMSTNHVYVFKKRQPNKYAYV EVRSMAE+QNRPP
Sbjct: 184 LGECPYDQGGYFIINGSEKVLIAQEKMSTNHVYVFKKRQPNKYAYVAEVRSMAETQNRPP 243
Query: 811 SSMFVRMLSRASAKGGSSGQYIRATLPYIRTEIPIIIVFRALGFVADKDILEHICYDFAD 990
S+MF+RML+R SAKGGSSGQYIRATLPYIR+EIPIIIVFRALGFVADKDILEHICY+F D
Sbjct: 244 STMFIRMLARTSAKGGSSGQYIRATLPYIRSEIPIIIVFRALGFVADKDILEHICYNFQD 303
Query: 991 TQMMELLRPSLEEAFVIQNQQVALDYIGKRGSTVGVTREKRIKYAKEILQKEMLPHVGVE 1170
TQMMELLRPSLEEAFVIQNQQVALDYIGKRG+TVGVTR++RIKYAKEILQKEMLPHVGV
Sbjct: 304 TQMMELLRPSLEEAFVIQNQQVALDYIGKRGATVGVTRDRRIKYAKEILQKEMLPHVGVG 363
Query: 1171 EYCETKKAYYFGYIIHRLLLCALGRRPEDDRDHYGNKRLDLAGPLLGGLFRMLFRKLTRD 1350
EYCETKKAYYFGYIIHRLLLCALGRR EDDRDHYGNKRLDLAGPLLGGLFRMLFRKLTRD
Sbjct: 364 EYCETKKAYYFGYIIHRLLLCALGRRAEDDRDHYGNKRLDLAGPLLGGLFRMLFRKLTRD 423
Query: 1351 VRGYVQKCVDNGKDVNLQFAIKAKTITSGLKYSLATGNWGQANAAGTRAGVSQVLNRLTY 1530
VRGYVQKCVDNGKDVNLQFAIKAKTITSGLKYSLATGNWGQANAAGTRAGVSQVLNRLTY
Sbjct: 424 VRGYVQKCVDNGKDVNLQFAIKAKTITSGLKYSLATGNWGQANAAGTRAGVSQVLNRLTY 483
Query: 1531 ASTLSHLRRLNSPIGREGKLAKPRQLHNSHWGMMCPAETPEGQACGLVKNLALMVYITVG 1710
ASTLSHLRRLNSPIGREGKLAKPRQLHNS WGMMCPAETPEGQACGLVKNLALMVYITVG
Sbjct: 484 ASTLSHLRRLNSPIGREGKLAKPRQLHNSQWGMMCPAETPEGQACGLVKNLALMVYITVG 543
Query: 1711 SAARPILEFLEEWSTENFEEISPAVIPQATKIFVNGCWVGIHRNPELLVKTLRQLRRQVD 1890
SAA PILEFLEEW TENFEEISPAVIPQATKIFVNGCWVGIHRNP++LV TLR+LRR+VD
Sbjct: 544 SAAYPILEFLEEWGTENFEEISPAVIPQATKIFVNGCWVGIHRNPDMLVSTLRRLRRRVD 603
Query: 1891 VNTEVGVIRDIRLKELRLYTDYGRCSRPLFIVEKQQLLIKKKDIRALQQRETPEEGGWHE 2070
VNTEVGV+RDIRLKELR+YTDYGRCSRPLFIVEKQ+LLIKKKDI+ALQQRE+P++GGWH+
Sbjct: 604 VNTEVGVVRDIRLKELRIYTDYGRCSRPLFIVEKQRLLIKKKDIQALQQRESPDDGGWHD 663
Query: 2071 LVAKGFIEYVDTEEEETTMI 2130
LVAKGFIEY+DTEEEETTMI
Sbjct: 664 LVAKGFIEYIDTEEEETTMI 683
>ref|XP_004134705.1| PREDICTED: DNA-directed RNA polymerase II subunit RPB2-like [Cucumis
sativus] gi|449479313|ref|XP_004155566.1| PREDICTED:
DNA-directed RNA polymerase II subunit RPB2-like [Cucumis
sativus]
Length = 1199
Score = 1277 bits (3304), Expect = 0.0
Identities = 632/676 (93%), Positives = 656/676 (97%)
Frame = +1
Query: 103 MYGGDEYDPSVNEDEEDITQEDAWAVISAYFEEKGLVRQQLDSFDEFIQNTMQEIVDESA 282
M D+ D ++ +DEE+ITQEDAWAVISAYFEEKGLVRQQLDSFDEFIQNTMQEIVDESA
Sbjct: 11 MNDDDDMDQAIPDDEEEITQEDAWAVISAYFEEKGLVRQQLDSFDEFIQNTMQEIVDESA 70
Query: 283 DIEIRPESQHNPGRQPDFLETIYKISFGQIYLSKPMMTESDGETATLFPKAARLRNLTYS 462
DIEIRPESQHNPG Q D ETIYKISFGQIYLSKPMMTESDGETATLFPKAARLRNLTYS
Sbjct: 71 DIEIRPESQHNPGHQSDVAETIYKISFGQIYLSKPMMTESDGETATLFPKAARLRNLTYS 130
Query: 463 APLYVDVTKRIIKKGHDCEEVTETQEFTKVFIGKVPIMLRSSYCTLYQNSEKDLTELGEC 642
APLYVDV+KR+IKKGHD EEVTETQ+FTKVFIGKVPIMLRSSYCTLYQNSEKDLTELGEC
Sbjct: 131 APLYVDVSKRVIKKGHDGEEVTETQDFTKVFIGKVPIMLRSSYCTLYQNSEKDLTELGEC 190
Query: 643 PYDQGGYFIINGSEKVLIAQEKMSTNHVYVFKKRQPNKYAYVGEVRSMAESQNRPPSSMF 822
PYDQGGYFIINGSEKVLIAQEKMSTNHVYVFKKRQPNKYA+V EVRSMAESQNRPPS+MF
Sbjct: 191 PYDQGGYFIINGSEKVLIAQEKMSTNHVYVFKKRQPNKYAFVAEVRSMAESQNRPPSTMF 250
Query: 823 VRMLSRASAKGGSSGQYIRATLPYIRTEIPIIIVFRALGFVADKDILEHICYDFADTQMM 1002
VRMLSR SAKGGSSGQYIRATLPYIR EIPIIIVFRALGFVADKDILEHICYDF+DTQMM
Sbjct: 251 VRMLSRTSAKGGSSGQYIRATLPYIRNEIPIIIVFRALGFVADKDILEHICYDFSDTQMM 310
Query: 1003 ELLRPSLEEAFVIQNQQVALDYIGKRGSTVGVTREKRIKYAKEILQKEMLPHVGVEEYCE 1182
ELLRPSLEEAFVIQNQQVALDYIGKRGSTVGVT+EKRIKYAKEILQKEMLPHVGV E+CE
Sbjct: 311 ELLRPSLEEAFVIQNQQVALDYIGKRGSTVGVTKEKRIKYAKEILQKEMLPHVGVGEFCE 370
Query: 1183 TKKAYYFGYIIHRLLLCALGRRPEDDRDHYGNKRLDLAGPLLGGLFRMLFRKLTRDVRGY 1362
TKKAYYFGYIIHRLLLCALGRR EDDRDHYGNKRLDLAGPLLGGLFRMLFRKLTRDVRGY
Sbjct: 371 TKKAYYFGYIIHRLLLCALGRRAEDDRDHYGNKRLDLAGPLLGGLFRMLFRKLTRDVRGY 430
Query: 1363 VQKCVDNGKDVNLQFAIKAKTITSGLKYSLATGNWGQANAAGTRAGVSQVLNRLTYASTL 1542
VQKCVDNGKDVNLQFAIKAKTITSGLKYSLATGNWGQANAAGTRAGVSQVLNRLTYASTL
Sbjct: 431 VQKCVDNGKDVNLQFAIKAKTITSGLKYSLATGNWGQANAAGTRAGVSQVLNRLTYASTL 490
Query: 1543 SHLRRLNSPIGREGKLAKPRQLHNSHWGMMCPAETPEGQACGLVKNLALMVYITVGSAAR 1722
SHLRRLNSPIGREGKLAKPRQLHNS WGMMCPAETPEGQACGLVKNLALMVYITVGSAA
Sbjct: 491 SHLRRLNSPIGREGKLAKPRQLHNSQWGMMCPAETPEGQACGLVKNLALMVYITVGSAAY 550
Query: 1723 PILEFLEEWSTENFEEISPAVIPQATKIFVNGCWVGIHRNPELLVKTLRQLRRQVDVNTE 1902
PILEFLEEW TENFEEISPAVIPQATKIFVNGCWVGIHR+PE+LVKTLR+LRR+VDVNTE
Sbjct: 551 PILEFLEEWGTENFEEISPAVIPQATKIFVNGCWVGIHRDPEMLVKTLRRLRRRVDVNTE 610
Query: 1903 VGVIRDIRLKELRLYTDYGRCSRPLFIVEKQQLLIKKKDIRALQQRETPEEGGWHELVAK 2082
VGV+RDIRLKELR+YTDYGRCSRPLFIVEKQ+LLIKKKDI ALQQRE+PE+GGWH+LVAK
Sbjct: 611 VGVVRDIRLKELRIYTDYGRCSRPLFIVEKQRLLIKKKDIHALQQRESPEDGGWHDLVAK 670
Query: 2083 GFIEYVDTEEEETTMI 2130
GFIEY+DTEEEETTMI
Sbjct: 671 GFIEYIDTEEEETTMI 686
>gb|EXC18122.1| DNA-directed RNA polymerase II subunit [Morus notabilis]
Length = 1193
Score = 1273 bits (3294), Expect = 0.0
Identities = 630/674 (93%), Positives = 654/674 (97%), Gaps = 3/674 (0%)
Frame = +1
Query: 118 EYDPSVNEDEED---ITQEDAWAVISAYFEEKGLVRQQLDSFDEFIQNTMQEIVDESADI 288
EYD N+D++D ITQEDAWAVISAYFEEKGLVRQQLDSFDEFIQNTMQEIVDESADI
Sbjct: 6 EYDQQYNDDDDDDEEITQEDAWAVISAYFEEKGLVRQQLDSFDEFIQNTMQEIVDESADI 65
Query: 289 EIRPESQHNPGRQPDFLETIYKISFGQIYLSKPMMTESDGETATLFPKAARLRNLTYSAP 468
EIRPESQHNPG Q DF+ETIYKISFGQIYLSKPMMTESDGETATLFPKAARLRNLTYSAP
Sbjct: 66 EIRPESQHNPGHQSDFVETIYKISFGQIYLSKPMMTESDGETATLFPKAARLRNLTYSAP 125
Query: 469 LYVDVTKRIIKKGHDCEEVTETQEFTKVFIGKVPIMLRSSYCTLYQNSEKDLTELGECPY 648
LYVDVTKR+IKKGHD EEVTETQ+FTKVFIGKVPIMLRSSYCTLYQNSEKDLTELGECPY
Sbjct: 126 LYVDVTKRVIKKGHDGEEVTETQDFTKVFIGKVPIMLRSSYCTLYQNSEKDLTELGECPY 185
Query: 649 DQGGYFIINGSEKVLIAQEKMSTNHVYVFKKRQPNKYAYVGEVRSMAESQNRPPSSMFVR 828
DQGGYFIINGSEKVLIAQEKMSTNHVYVFKKRQPNKYAYV EVRSMAESQNRPPS+MFVR
Sbjct: 186 DQGGYFIINGSEKVLIAQEKMSTNHVYVFKKRQPNKYAYVAEVRSMAESQNRPPSTMFVR 245
Query: 829 MLSRASAKGGSSGQYIRATLPYIRTEIPIIIVFRALGFVADKDILEHICYDFADTQMMEL 1008
MLSR S+KGGSSGQYIRATLPYIR EIPIIIVFRALGFVADKDILEHICYDF+DTQMMEL
Sbjct: 246 MLSRTSSKGGSSGQYIRATLPYIRAEIPIIIVFRALGFVADKDILEHICYDFSDTQMMEL 305
Query: 1009 LRPSLEEAFVIQNQQVALDYIGKRGSTVGVTREKRIKYAKEILQKEMLPHVGVEEYCETK 1188
LRPSLEEAFVIQNQQVALDYIGKRG+TVGVT+EKRIKYAKEILQKEMLPHVG E+CETK
Sbjct: 306 LRPSLEEAFVIQNQQVALDYIGKRGATVGVTKEKRIKYAKEILQKEMLPHVGTGEFCETK 365
Query: 1189 KAYYFGYIIHRLLLCALGRRPEDDRDHYGNKRLDLAGPLLGGLFRMLFRKLTRDVRGYVQ 1368
KAYYFGYIIHRLLLCALGRR EDDRDHYGNKRLDLAGPLLGGLFRMLFRKLTRDVRGYVQ
Sbjct: 366 KAYYFGYIIHRLLLCALGRRAEDDRDHYGNKRLDLAGPLLGGLFRMLFRKLTRDVRGYVQ 425
Query: 1369 KCVDNGKDVNLQFAIKAKTITSGLKYSLATGNWGQANAAGTRAGVSQVLNRLTYASTLSH 1548
KCVDNGKDVNLQFAIKAKTITSGLKYSLATGNWGQANAAGTRAGVSQVLNRLTYASTLSH
Sbjct: 426 KCVDNGKDVNLQFAIKAKTITSGLKYSLATGNWGQANAAGTRAGVSQVLNRLTYASTLSH 485
Query: 1549 LRRLNSPIGREGKLAKPRQLHNSHWGMMCPAETPEGQACGLVKNLALMVYITVGSAARPI 1728
LRRLNSPIGREGKLAKPRQLHNS WGMMCPAETPEGQACGLVKNLALMVYITVGSAA PI
Sbjct: 486 LRRLNSPIGREGKLAKPRQLHNSQWGMMCPAETPEGQACGLVKNLALMVYITVGSAAYPI 545
Query: 1729 LEFLEEWSTENFEEISPAVIPQATKIFVNGCWVGIHRNPELLVKTLRQLRRQVDVNTEVG 1908
LEFLEEW TENFEEISPAVIPQATKIFVNGCWVGIHR+P++LVKTLR+LRR+VDVNTEVG
Sbjct: 546 LEFLEEWGTENFEEISPAVIPQATKIFVNGCWVGIHRDPDMLVKTLRRLRRRVDVNTEVG 605
Query: 1909 VIRDIRLKELRLYTDYGRCSRPLFIVEKQQLLIKKKDIRALQQRETPEEGGWHELVAKGF 2088
V+RDIRLKELR+YTDYGRCSRPLFIVEKQ+LLIKK+DIRALQQRETPEE GWH+LV+ GF
Sbjct: 606 VVRDIRLKELRIYTDYGRCSRPLFIVEKQRLLIKKRDIRALQQRETPEEAGWHDLVSNGF 665
Query: 2089 IEYVDTEEEETTMI 2130
IEY+DTEEEETTMI
Sbjct: 666 IEYIDTEEEETTMI 679
>ref|XP_006347043.1| PREDICTED: DNA-directed RNA polymerase II subunit RPB2-like [Solanum
tuberosum]
Length = 1191
Score = 1272 bits (3291), Expect = 0.0
Identities = 630/674 (93%), Positives = 657/674 (97%), Gaps = 2/674 (0%)
Frame = +1
Query: 115 DEYDP--SVNEDEEDITQEDAWAVISAYFEEKGLVRQQLDSFDEFIQNTMQEIVDESADI 288
DEY+P +V++DEE+ITQEDAWAVISAYFEEKGLVRQQLDSFDEFIQNTMQEIVDESADI
Sbjct: 5 DEYEPQYNVDDDEEEITQEDAWAVISAYFEEKGLVRQQLDSFDEFIQNTMQEIVDESADI 64
Query: 289 EIRPESQHNPGRQPDFLETIYKISFGQIYLSKPMMTESDGETATLFPKAARLRNLTYSAP 468
EIRPESQHNPG Q DF ETIYKI+FGQIYLSKPMMTESDGETATLFPKAARLRNLTYSAP
Sbjct: 65 EIRPESQHNPGHQSDFAETIYKINFGQIYLSKPMMTESDGETATLFPKAARLRNLTYSAP 124
Query: 469 LYVDVTKRIIKKGHDCEEVTETQEFTKVFIGKVPIMLRSSYCTLYQNSEKDLTELGECPY 648
LYVDVTKR+IKKGHD EEVTETQ+FTKVFIGKVPIMLRSSYCTLYQNSEKDLTELGECP
Sbjct: 125 LYVDVTKRVIKKGHDGEEVTETQDFTKVFIGKVPIMLRSSYCTLYQNSEKDLTELGECPL 184
Query: 649 DQGGYFIINGSEKVLIAQEKMSTNHVYVFKKRQPNKYAYVGEVRSMAESQNRPPSSMFVR 828
DQGGYFIINGSEKVLIAQEKMSTNHVYVFKKRQPNKYA+V EVRSMAESQNRPPS+MFVR
Sbjct: 185 DQGGYFIINGSEKVLIAQEKMSTNHVYVFKKRQPNKYAFVAEVRSMAESQNRPPSTMFVR 244
Query: 829 MLSRASAKGGSSGQYIRATLPYIRTEIPIIIVFRALGFVADKDILEHICYDFADTQMMEL 1008
MLSR SAKGGSSGQYIRATLPYIRTEIPIIIVFRALGFVADKDILEHICYDF DTQMMEL
Sbjct: 245 MLSRTSAKGGSSGQYIRATLPYIRTEIPIIIVFRALGFVADKDILEHICYDFNDTQMMEL 304
Query: 1009 LRPSLEEAFVIQNQQVALDYIGKRGSTVGVTREKRIKYAKEILQKEMLPHVGVEEYCETK 1188
LRPSLEEAFVIQNQQVALDYIGKRG+TVGVTREKRIKYAKEILQKEMLPHVGV EYCETK
Sbjct: 305 LRPSLEEAFVIQNQQVALDYIGKRGATVGVTREKRIKYAKEILQKEMLPHVGVGEYCETK 364
Query: 1189 KAYYFGYIIHRLLLCALGRRPEDDRDHYGNKRLDLAGPLLGGLFRMLFRKLTRDVRGYVQ 1368
KAYYFGYIIHRLLLCALGRR EDDRDHYGNKRLDLAGPLLGGLFRMLFRKLTRDVRGYVQ
Sbjct: 365 KAYYFGYIIHRLLLCALGRRAEDDRDHYGNKRLDLAGPLLGGLFRMLFRKLTRDVRGYVQ 424
Query: 1369 KCVDNGKDVNLQFAIKAKTITSGLKYSLATGNWGQANAAGTRAGVSQVLNRLTYASTLSH 1548
KCVDNGKDVNLQFAIKAKTITSGLKYSLATGNWGQANAAGTRAGVSQVLNRLTYASTLSH
Sbjct: 425 KCVDNGKDVNLQFAIKAKTITSGLKYSLATGNWGQANAAGTRAGVSQVLNRLTYASTLSH 484
Query: 1549 LRRLNSPIGREGKLAKPRQLHNSHWGMMCPAETPEGQACGLVKNLALMVYITVGSAARPI 1728
LRRLNSPIGREGKLAKPRQLHNS WGMMCPAETPEGQACGLVKNLALMVYITVGSAA PI
Sbjct: 485 LRRLNSPIGREGKLAKPRQLHNSQWGMMCPAETPEGQACGLVKNLALMVYITVGSAAYPI 544
Query: 1729 LEFLEEWSTENFEEISPAVIPQATKIFVNGCWVGIHRNPELLVKTLRQLRRQVDVNTEVG 1908
LEFLEEW TENFEEISPAVIPQATKIFVNG WVGIHR+P++LV+TLR+LRR+VDVNTEVG
Sbjct: 545 LEFLEEWGTENFEEISPAVIPQATKIFVNGTWVGIHRDPDMLVRTLRRLRRRVDVNTEVG 604
Query: 1909 VIRDIRLKELRLYTDYGRCSRPLFIVEKQQLLIKKKDIRALQQRETPEEGGWHELVAKGF 2088
V+RDIRLKELR+YTDYGRCSRPLFIVEKQ+L+IKKKDI+ LQQRE+P+EGGWH+LVAKG+
Sbjct: 605 VVRDIRLKELRIYTDYGRCSRPLFIVEKQRLMIKKKDIQTLQQRESPDEGGWHDLVAKGY 664
Query: 2089 IEYVDTEEEETTMI 2130
IEY+DTEEEETTMI
Sbjct: 665 IEYIDTEEEETTMI 678
>ref|XP_006859038.1| hypothetical protein AMTR_s00068p00181410 [Amborella trichopoda]
gi|548863150|gb|ERN20505.1| hypothetical protein
AMTR_s00068p00181410 [Amborella trichopoda]
Length = 1190
Score = 1271 bits (3289), Expect = 0.0
Identities = 636/673 (94%), Positives = 653/673 (97%)
Frame = +1
Query: 112 GDEYDPSVNEDEEDITQEDAWAVISAYFEEKGLVRQQLDSFDEFIQNTMQEIVDESADIE 291
G E D VNEDEE ITQEDAWAVISAYF+EKGLVRQQLDSFDEFIQNTMQEIVDESADIE
Sbjct: 3 GGEDDDYVNEDEE-ITQEDAWAVISAYFDEKGLVRQQLDSFDEFIQNTMQEIVDESADIE 61
Query: 292 IRPESQHNPGRQPDFLETIYKISFGQIYLSKPMMTESDGETATLFPKAARLRNLTYSAPL 471
IRPESQHNPGRQ DF+ETIYKISFGQIYLSKPMMTESDGETATLFPKAARLRNLTYSAPL
Sbjct: 62 IRPESQHNPGRQADFVETIYKISFGQIYLSKPMMTESDGETATLFPKAARLRNLTYSAPL 121
Query: 472 YVDVTKRIIKKGHDCEEVTETQEFTKVFIGKVPIMLRSSYCTLYQNSEKDLTELGECPYD 651
YVDVTKR+IKKGHD EE+ E QE TKVFIGKVPIMLRSSYCTL+QNSEKDLTELGECPYD
Sbjct: 122 YVDVTKRVIKKGHDHEELAEQQELTKVFIGKVPIMLRSSYCTLFQNSEKDLTELGECPYD 181
Query: 652 QGGYFIINGSEKVLIAQEKMSTNHVYVFKKRQPNKYAYVGEVRSMAESQNRPPSSMFVRM 831
QGGYFIINGSEKVLIAQEKMSTNHVYVFKKRQPNKYAYV EVRSMAESQN+PPSSMFVRM
Sbjct: 182 QGGYFIINGSEKVLIAQEKMSTNHVYVFKKRQPNKYAYVAEVRSMAESQNKPPSSMFVRM 241
Query: 832 LSRASAKGGSSGQYIRATLPYIRTEIPIIIVFRALGFVADKDILEHICYDFADTQMMELL 1011
LSR S+KGGSSGQYIRATLPYIR EIPIIIVFRALGFVADKDILEHICYDF+DTQMMELL
Sbjct: 242 LSRTSSKGGSSGQYIRATLPYIRAEIPIIIVFRALGFVADKDILEHICYDFSDTQMMELL 301
Query: 1012 RPSLEEAFVIQNQQVALDYIGKRGSTVGVTREKRIKYAKEILQKEMLPHVGVEEYCETKK 1191
RPSLEEAFVIQNQQVALDYIGKRGSTVGVT+EKRIKYAKEILQKEMLPHVGV EYCETKK
Sbjct: 302 RPSLEEAFVIQNQQVALDYIGKRGSTVGVTKEKRIKYAKEILQKEMLPHVGVGEYCETKK 361
Query: 1192 AYYFGYIIHRLLLCALGRRPEDDRDHYGNKRLDLAGPLLGGLFRMLFRKLTRDVRGYVQK 1371
AYYFGYIIHRLL+CALGRRPEDDRDHYGNKRLDLAGPLLG LFR +FRKLTRDVR YVQK
Sbjct: 362 AYYFGYIIHRLLVCALGRRPEDDRDHYGNKRLDLAGPLLGSLFRTMFRKLTRDVRSYVQK 421
Query: 1372 CVDNGKDVNLQFAIKAKTITSGLKYSLATGNWGQANAAGTRAGVSQVLNRLTYASTLSHL 1551
CVDNGK+VNLQFAIKAKTITSGLKYSLATGNWGQANAAGTRAGVSQVLNRLT+ASTLSHL
Sbjct: 422 CVDNGKEVNLQFAIKAKTITSGLKYSLATGNWGQANAAGTRAGVSQVLNRLTFASTLSHL 481
Query: 1552 RRLNSPIGREGKLAKPRQLHNSHWGMMCPAETPEGQACGLVKNLALMVYITVGSAARPIL 1731
RRLNSPIGREGKLAKPRQLHNSHWGMMCPAETPEGQACGLVKNLALMVYITVGSAA PIL
Sbjct: 482 RRLNSPIGREGKLAKPRQLHNSHWGMMCPAETPEGQACGLVKNLALMVYITVGSAANPIL 541
Query: 1732 EFLEEWSTENFEEISPAVIPQATKIFVNGCWVGIHRNPELLVKTLRQLRRQVDVNTEVGV 1911
EFLEEWSTENFEEISPAVIPQATKIFVNGCWVGIHRNPELLVKTLRQLRRQVDVNTEVGV
Sbjct: 542 EFLEEWSTENFEEISPAVIPQATKIFVNGCWVGIHRNPELLVKTLRQLRRQVDVNTEVGV 601
Query: 1912 IRDIRLKELRLYTDYGRCSRPLFIVEKQQLLIKKKDIRALQQRETPEEGGWHELVAKGFI 2091
IRDIRLKELRLYTDYGRCSRPLFIVEKQ+LLIKK DIRALQQRE+P+E GWH+LVAKGFI
Sbjct: 602 IRDIRLKELRLYTDYGRCSRPLFIVEKQRLLIKKSDIRALQQRESPDE-GWHDLVAKGFI 660
Query: 2092 EYVDTEEEETTMI 2130
EYVDTEEEETTMI
Sbjct: 661 EYVDTEEEETTMI 673
>ref|XP_006487405.1| PREDICTED: DNA-directed RNA polymerase II subunit RPB2-like [Citrus
sinensis]
Length = 1195
Score = 1269 bits (3285), Expect = 0.0
Identities = 627/672 (93%), Positives = 653/672 (97%)
Frame = +1
Query: 115 DEYDPSVNEDEEDITQEDAWAVISAYFEEKGLVRQQLDSFDEFIQNTMQEIVDESADIEI 294
+++ ++EE+ITQEDAWAVISAYFEEKGLVRQQLDSFDEFIQNTMQEIVDESADIEI
Sbjct: 10 EQHQQEEEDEEEEITQEDAWAVISAYFEEKGLVRQQLDSFDEFIQNTMQEIVDESADIEI 69
Query: 295 RPESQHNPGRQPDFLETIYKISFGQIYLSKPMMTESDGETATLFPKAARLRNLTYSAPLY 474
RPESQHNPG+Q DF ETIYKISFGQIYLSKPMMTESDGETATLFPKAARLRNLTYSAPLY
Sbjct: 70 RPESQHNPGQQSDFAETIYKISFGQIYLSKPMMTESDGETATLFPKAARLRNLTYSAPLY 129
Query: 475 VDVTKRIIKKGHDCEEVTETQEFTKVFIGKVPIMLRSSYCTLYQNSEKDLTELGECPYDQ 654
VDVTKR+IKKGHD EEVTETQ+FTKVFIGKVPIMLRSSYCTLYQNSEKDLTELGECPYDQ
Sbjct: 130 VDVTKRVIKKGHDGEEVTETQDFTKVFIGKVPIMLRSSYCTLYQNSEKDLTELGECPYDQ 189
Query: 655 GGYFIINGSEKVLIAQEKMSTNHVYVFKKRQPNKYAYVGEVRSMAESQNRPPSSMFVRML 834
GGYFIINGSEKVLIAQEKMSTNHVYVFKKRQPNKYAYV EVRSMAESQNRPPS+MFVRML
Sbjct: 190 GGYFIINGSEKVLIAQEKMSTNHVYVFKKRQPNKYAYVAEVRSMAESQNRPPSTMFVRML 249
Query: 835 SRASAKGGSSGQYIRATLPYIRTEIPIIIVFRALGFVADKDILEHICYDFADTQMMELLR 1014
SR SAKGGSSGQYIRATLPYIRTEIPIIIVFRALGFVADKDILEHICYDF DTQMMELLR
Sbjct: 250 SRTSAKGGSSGQYIRATLPYIRTEIPIIIVFRALGFVADKDILEHICYDFQDTQMMELLR 309
Query: 1015 PSLEEAFVIQNQQVALDYIGKRGSTVGVTREKRIKYAKEILQKEMLPHVGVEEYCETKKA 1194
PSLEEAFVIQNQQVALDYIGKRG+TVGVTR+KRIKYAKEILQKEMLPHVG ++CETKKA
Sbjct: 310 PSLEEAFVIQNQQVALDYIGKRGATVGVTRDKRIKYAKEILQKEMLPHVGTGDFCETKKA 369
Query: 1195 YYFGYIIHRLLLCALGRRPEDDRDHYGNKRLDLAGPLLGGLFRMLFRKLTRDVRGYVQKC 1374
YYFGYIIHRLLLCALGRR EDDRDHYGNKRLDLAGPLLGGLFRMLFRKLTRDVR YVQKC
Sbjct: 370 YYFGYIIHRLLLCALGRRAEDDRDHYGNKRLDLAGPLLGGLFRMLFRKLTRDVRAYVQKC 429
Query: 1375 VDNGKDVNLQFAIKAKTITSGLKYSLATGNWGQANAAGTRAGVSQVLNRLTYASTLSHLR 1554
VDNGKDVNLQFAIKAKTITSGLKYSLATGNWGQANAAGTRAGVSQVLNRLTYASTLSHLR
Sbjct: 430 VDNGKDVNLQFAIKAKTITSGLKYSLATGNWGQANAAGTRAGVSQVLNRLTYASTLSHLR 489
Query: 1555 RLNSPIGREGKLAKPRQLHNSHWGMMCPAETPEGQACGLVKNLALMVYITVGSAARPILE 1734
RLNSPIGREGKLAKPRQLHNS WGMMCPAETPEGQACGLVKNLALMVYITVGSAA PILE
Sbjct: 490 RLNSPIGREGKLAKPRQLHNSQWGMMCPAETPEGQACGLVKNLALMVYITVGSAAYPILE 549
Query: 1735 FLEEWSTENFEEISPAVIPQATKIFVNGCWVGIHRNPELLVKTLRQLRRQVDVNTEVGVI 1914
FLEEW TENFEEISPAVIPQATKIFVNGCWVGIHR+PE+LVKTLR+LRR+VDVNTEVGV+
Sbjct: 550 FLEEWGTENFEEISPAVIPQATKIFVNGCWVGIHRDPEMLVKTLRRLRRRVDVNTEVGVV 609
Query: 1915 RDIRLKELRLYTDYGRCSRPLFIVEKQQLLIKKKDIRALQQRETPEEGGWHELVAKGFIE 2094
RDIRLKELR+YTDYGRCSRPLFIVEKQ+LLIKK+DI ALQQRE+PE+GGWH+LVAKGFIE
Sbjct: 610 RDIRLKELRIYTDYGRCSRPLFIVEKQRLLIKKRDIIALQQRESPEDGGWHDLVAKGFIE 669
Query: 2095 YVDTEEEETTMI 2130
Y+DTEEEETTMI
Sbjct: 670 YIDTEEEETTMI 681
>ref|XP_006423594.1| hypothetical protein CICLE_v10027701mg [Citrus clementina]
gi|557525528|gb|ESR36834.1| hypothetical protein
CICLE_v10027701mg [Citrus clementina]
Length = 1195
Score = 1269 bits (3285), Expect = 0.0
Identities = 627/672 (93%), Positives = 653/672 (97%)
Frame = +1
Query: 115 DEYDPSVNEDEEDITQEDAWAVISAYFEEKGLVRQQLDSFDEFIQNTMQEIVDESADIEI 294
+++ ++EE+ITQEDAWAVISAYFEEKGLVRQQLDSFDEFIQNTMQEIVDESADIEI
Sbjct: 10 EQHQQEEEDEEEEITQEDAWAVISAYFEEKGLVRQQLDSFDEFIQNTMQEIVDESADIEI 69
Query: 295 RPESQHNPGRQPDFLETIYKISFGQIYLSKPMMTESDGETATLFPKAARLRNLTYSAPLY 474
RPESQHNPG+Q DF ETIYKISFGQIYLSKPMMTESDGETATLFPKAARLRNLTYSAPLY
Sbjct: 70 RPESQHNPGQQSDFAETIYKISFGQIYLSKPMMTESDGETATLFPKAARLRNLTYSAPLY 129
Query: 475 VDVTKRIIKKGHDCEEVTETQEFTKVFIGKVPIMLRSSYCTLYQNSEKDLTELGECPYDQ 654
VDVTKR+IKKGHD EEVTETQ+FTKVFIGKVPIMLRSSYCTLYQNSEKDLTELGECPYDQ
Sbjct: 130 VDVTKRVIKKGHDGEEVTETQDFTKVFIGKVPIMLRSSYCTLYQNSEKDLTELGECPYDQ 189
Query: 655 GGYFIINGSEKVLIAQEKMSTNHVYVFKKRQPNKYAYVGEVRSMAESQNRPPSSMFVRML 834
GGYFIINGSEKVLIAQEKMSTNHVYVFKKRQPNKYAYV EVRSMAESQNRPPS+MFVRML
Sbjct: 190 GGYFIINGSEKVLIAQEKMSTNHVYVFKKRQPNKYAYVAEVRSMAESQNRPPSTMFVRML 249
Query: 835 SRASAKGGSSGQYIRATLPYIRTEIPIIIVFRALGFVADKDILEHICYDFADTQMMELLR 1014
SR SAKGGSSGQYIRATLPYIRTEIPIIIVFRALGFVADKDILEHICYDF DTQMMELLR
Sbjct: 250 SRTSAKGGSSGQYIRATLPYIRTEIPIIIVFRALGFVADKDILEHICYDFQDTQMMELLR 309
Query: 1015 PSLEEAFVIQNQQVALDYIGKRGSTVGVTREKRIKYAKEILQKEMLPHVGVEEYCETKKA 1194
PSLEEAFVIQNQQVALDYIGKRG+TVGVTR+KRIKYAKEILQKEMLPHVG ++CETKKA
Sbjct: 310 PSLEEAFVIQNQQVALDYIGKRGATVGVTRDKRIKYAKEILQKEMLPHVGTGDFCETKKA 369
Query: 1195 YYFGYIIHRLLLCALGRRPEDDRDHYGNKRLDLAGPLLGGLFRMLFRKLTRDVRGYVQKC 1374
YYFGYIIHRLLLCALGRR EDDRDHYGNKRLDLAGPLLGGLFRMLFRKLTRDVR YVQKC
Sbjct: 370 YYFGYIIHRLLLCALGRRAEDDRDHYGNKRLDLAGPLLGGLFRMLFRKLTRDVRAYVQKC 429
Query: 1375 VDNGKDVNLQFAIKAKTITSGLKYSLATGNWGQANAAGTRAGVSQVLNRLTYASTLSHLR 1554
VDNGKDVNLQFAIKAKTITSGLKYSLATGNWGQANAAGTRAGVSQVLNRLTYASTLSHLR
Sbjct: 430 VDNGKDVNLQFAIKAKTITSGLKYSLATGNWGQANAAGTRAGVSQVLNRLTYASTLSHLR 489
Query: 1555 RLNSPIGREGKLAKPRQLHNSHWGMMCPAETPEGQACGLVKNLALMVYITVGSAARPILE 1734
RLNSPIGREGKLAKPRQLHNS WGMMCPAETPEGQACGLVKNLALMVYITVGSAA PILE
Sbjct: 490 RLNSPIGREGKLAKPRQLHNSQWGMMCPAETPEGQACGLVKNLALMVYITVGSAAYPILE 549
Query: 1735 FLEEWSTENFEEISPAVIPQATKIFVNGCWVGIHRNPELLVKTLRQLRRQVDVNTEVGVI 1914
FLEEW TENFEEISPAVIPQATKIFVNGCWVGIHR+PE+LVKTLR+LRR+VDVNTEVGV+
Sbjct: 550 FLEEWGTENFEEISPAVIPQATKIFVNGCWVGIHRDPEMLVKTLRRLRRRVDVNTEVGVV 609
Query: 1915 RDIRLKELRLYTDYGRCSRPLFIVEKQQLLIKKKDIRALQQRETPEEGGWHELVAKGFIE 2094
RDIRLKELR+YTDYGRCSRPLFIVEKQ+LLIKK+DI ALQQRE+PE+GGWH+LVAKGFIE
Sbjct: 610 RDIRLKELRIYTDYGRCSRPLFIVEKQRLLIKKRDIIALQQRESPEDGGWHDLVAKGFIE 669
Query: 2095 YVDTEEEETTMI 2130
Y+DTEEEETTMI
Sbjct: 670 YIDTEEEETTMI 681
>ref|NP_001233889.1| DNA-directed RNA polymerase II subunit RPB2 [Solanum lycopersicum]
gi|11134656|sp|Q42877.1|RPB2_SOLLC RecName:
Full=DNA-directed RNA polymerase II subunit RPB2;
Short=RNA polymerase II subunit 2; Short=RNA polymerase
II subunit B2; AltName: Full=DNA-directed RNA polymerase
II 135 kDa polypeptide gi|1049068|gb|AAC49273.1| RNA
polymerase II subunit 2 [Solanum lycopersicum]
Length = 1191
Score = 1269 bits (3285), Expect = 0.0
Identities = 628/674 (93%), Positives = 657/674 (97%), Gaps = 2/674 (0%)
Frame = +1
Query: 115 DEYDP--SVNEDEEDITQEDAWAVISAYFEEKGLVRQQLDSFDEFIQNTMQEIVDESADI 288
DEY+P +V++DEE+ITQEDAWAVISAYFEEKGLVRQQLDSFDEFIQNTMQEIVDESADI
Sbjct: 5 DEYEPQYNVDDDEEEITQEDAWAVISAYFEEKGLVRQQLDSFDEFIQNTMQEIVDESADI 64
Query: 289 EIRPESQHNPGRQPDFLETIYKISFGQIYLSKPMMTESDGETATLFPKAARLRNLTYSAP 468
EIRPESQHNPG Q DF ETIYKI+FGQIYLSKPMMTESDGETATLFPKAARLRNLTYSAP
Sbjct: 65 EIRPESQHNPGHQSDFAETIYKINFGQIYLSKPMMTESDGETATLFPKAARLRNLTYSAP 124
Query: 469 LYVDVTKRIIKKGHDCEEVTETQEFTKVFIGKVPIMLRSSYCTLYQNSEKDLTELGECPY 648
LYVDVTKR+IKKGHD EEVTETQ+FTKVFIGKVPIMLRSSYCTLYQNSEKDLTELGECP
Sbjct: 125 LYVDVTKRVIKKGHDGEEVTETQDFTKVFIGKVPIMLRSSYCTLYQNSEKDLTELGECPL 184
Query: 649 DQGGYFIINGSEKVLIAQEKMSTNHVYVFKKRQPNKYAYVGEVRSMAESQNRPPSSMFVR 828
DQGGYFIINGSEKVLIAQEKMSTNHVYVFKKRQPNKYA+V EVRSMA++QNRPPS+MFVR
Sbjct: 185 DQGGYFIINGSEKVLIAQEKMSTNHVYVFKKRQPNKYAFVAEVRSMADTQNRPPSTMFVR 244
Query: 829 MLSRASAKGGSSGQYIRATLPYIRTEIPIIIVFRALGFVADKDILEHICYDFADTQMMEL 1008
MLSR SAKGGSSGQYIRATLPYIRTEIPIIIVFRALGFVADKDILEHICYDF DTQMMEL
Sbjct: 245 MLSRTSAKGGSSGQYIRATLPYIRTEIPIIIVFRALGFVADKDILEHICYDFNDTQMMEL 304
Query: 1009 LRPSLEEAFVIQNQQVALDYIGKRGSTVGVTREKRIKYAKEILQKEMLPHVGVEEYCETK 1188
LRPSLEEAFVIQNQQVALDYIGKRG+TVGVTREKRIKYAKEILQKEMLPHVGV EYCETK
Sbjct: 305 LRPSLEEAFVIQNQQVALDYIGKRGATVGVTREKRIKYAKEILQKEMLPHVGVGEYCETK 364
Query: 1189 KAYYFGYIIHRLLLCALGRRPEDDRDHYGNKRLDLAGPLLGGLFRMLFRKLTRDVRGYVQ 1368
KAYYFGYIIHRLLLCALGRR EDDRDHYGNKRLDLAGPLLGGLFRMLFRKLTRDVRGYVQ
Sbjct: 365 KAYYFGYIIHRLLLCALGRRAEDDRDHYGNKRLDLAGPLLGGLFRMLFRKLTRDVRGYVQ 424
Query: 1369 KCVDNGKDVNLQFAIKAKTITSGLKYSLATGNWGQANAAGTRAGVSQVLNRLTYASTLSH 1548
KCVDNGKDVNLQFAIKAKTITSGLKYSLATGNWGQANAAGTRAGVSQVLNRLTYASTLSH
Sbjct: 425 KCVDNGKDVNLQFAIKAKTITSGLKYSLATGNWGQANAAGTRAGVSQVLNRLTYASTLSH 484
Query: 1549 LRRLNSPIGREGKLAKPRQLHNSHWGMMCPAETPEGQACGLVKNLALMVYITVGSAARPI 1728
LRRLNSPIGREGKLAKPRQLHNS WGMMCPAETPEGQACGLVKNLALMVYITVGSAA PI
Sbjct: 485 LRRLNSPIGREGKLAKPRQLHNSQWGMMCPAETPEGQACGLVKNLALMVYITVGSAAYPI 544
Query: 1729 LEFLEEWSTENFEEISPAVIPQATKIFVNGCWVGIHRNPELLVKTLRQLRRQVDVNTEVG 1908
LEFLEEW TENFEEISPAVIPQATKIFVNG WVGIHR+P++LV+TLR+LRR+VDVNTEVG
Sbjct: 545 LEFLEEWGTENFEEISPAVIPQATKIFVNGTWVGIHRDPDMLVRTLRRLRRRVDVNTEVG 604
Query: 1909 VIRDIRLKELRLYTDYGRCSRPLFIVEKQQLLIKKKDIRALQQRETPEEGGWHELVAKGF 2088
V+RDIRLKELR+YTDYGRCSRPLFIVEKQ+L+IKKKDI+ LQQRE+P+EGGWH+LVAKG+
Sbjct: 605 VVRDIRLKELRIYTDYGRCSRPLFIVEKQRLMIKKKDIQTLQQRESPDEGGWHDLVAKGY 664
Query: 2089 IEYVDTEEEETTMI 2130
IEY+DTEEEETTMI
Sbjct: 665 IEYIDTEEEETTMI 678
>ref|XP_004499217.1| PREDICTED: DNA-directed RNA polymerase II subunit RPB2-like [Cicer
arietinum]
Length = 1194
Score = 1267 bits (3279), Expect = 0.0
Identities = 625/674 (92%), Positives = 656/674 (97%), Gaps = 3/674 (0%)
Frame = +1
Query: 118 EYDPSV---NEDEEDITQEDAWAVISAYFEEKGLVRQQLDSFDEFIQNTMQEIVDESADI 288
EYD + +DEE+ITQEDAWAVISAYFEEKGLVRQQLDSFDEFIQNTMQEIVDESADI
Sbjct: 8 EYDQQMMDEEDDEEEITQEDAWAVISAYFEEKGLVRQQLDSFDEFIQNTMQEIVDESADI 67
Query: 289 EIRPESQHNPGRQPDFLETIYKISFGQIYLSKPMMTESDGETATLFPKAARLRNLTYSAP 468
EIRPESQHNPG Q DF ETIYKISFGQIYLSKPMMTESDGET+TLFPKAARLRNLTYSAP
Sbjct: 68 EIRPESQHNPGHQSDFAETIYKISFGQIYLSKPMMTESDGETSTLFPKAARLRNLTYSAP 127
Query: 469 LYVDVTKRIIKKGHDCEEVTETQEFTKVFIGKVPIMLRSSYCTLYQNSEKDLTELGECPY 648
LYVDV+KR+IKKGHD EEVTETQ+FTKVFIGKVPIMLRSSYCTL+QNSEKDLTELGECPY
Sbjct: 128 LYVDVSKRVIKKGHDGEEVTETQDFTKVFIGKVPIMLRSSYCTLFQNSEKDLTELGECPY 187
Query: 649 DQGGYFIINGSEKVLIAQEKMSTNHVYVFKKRQPNKYAYVGEVRSMAESQNRPPSSMFVR 828
DQGGYFIINGSEKVLIAQEKMSTNHVYVFKKRQPNKYAYV EVRSMAESQNRPPS+MFVR
Sbjct: 188 DQGGYFIINGSEKVLIAQEKMSTNHVYVFKKRQPNKYAYVAEVRSMAESQNRPPSTMFVR 247
Query: 829 MLSRASAKGGSSGQYIRATLPYIRTEIPIIIVFRALGFVADKDILEHICYDFADTQMMEL 1008
MLSR S+KGGSSGQYIRATLPYIRTEIPIIIVFRALGFVADKDILEHICYDF+DTQMMEL
Sbjct: 248 MLSRTSSKGGSSGQYIRATLPYIRTEIPIIIVFRALGFVADKDILEHICYDFSDTQMMEL 307
Query: 1009 LRPSLEEAFVIQNQQVALDYIGKRGSTVGVTREKRIKYAKEILQKEMLPHVGVEEYCETK 1188
LRPSLEEAFVIQNQQVALDYIGKRG+TVGVT+EKRIKYAK+ILQ+EMLPHVGV EYCETK
Sbjct: 308 LRPSLEEAFVIQNQQVALDYIGKRGATVGVTKEKRIKYAKDILQREMLPHVGVGEYCETK 367
Query: 1189 KAYYFGYIIHRLLLCALGRRPEDDRDHYGNKRLDLAGPLLGGLFRMLFRKLTRDVRGYVQ 1368
KAYYFGYIIHRLLLCALGRR EDDRDHYGNKRLDLAGPLLGGLFRMLFRKLTRDVRGYVQ
Sbjct: 368 KAYYFGYIIHRLLLCALGRRAEDDRDHYGNKRLDLAGPLLGGLFRMLFRKLTRDVRGYVQ 427
Query: 1369 KCVDNGKDVNLQFAIKAKTITSGLKYSLATGNWGQANAAGTRAGVSQVLNRLTYASTLSH 1548
KCVDNGKDVNLQFAIKAKTITSGLKYSLATGNWGQANAAGTRAGVSQVLNRLTYASTLSH
Sbjct: 428 KCVDNGKDVNLQFAIKAKTITSGLKYSLATGNWGQANAAGTRAGVSQVLNRLTYASTLSH 487
Query: 1549 LRRLNSPIGREGKLAKPRQLHNSHWGMMCPAETPEGQACGLVKNLALMVYITVGSAARPI 1728
LRRLNSPIGREGKLAKPRQLHNS WGMMCPAETPEGQACGLVKNLALMVYITVGSAA PI
Sbjct: 488 LRRLNSPIGREGKLAKPRQLHNSQWGMMCPAETPEGQACGLVKNLALMVYITVGSAAYPI 547
Query: 1729 LEFLEEWSTENFEEISPAVIPQATKIFVNGCWVGIHRNPELLVKTLRQLRRQVDVNTEVG 1908
LEFLEEW TENFEEISPAVIPQATKIFVNGCW+GIHR+P++LV+TLR+LRR+VDVNTEVG
Sbjct: 548 LEFLEEWGTENFEEISPAVIPQATKIFVNGCWMGIHRDPDMLVRTLRKLRRRVDVNTEVG 607
Query: 1909 VIRDIRLKELRLYTDYGRCSRPLFIVEKQQLLIKKKDIRALQQRETPEEGGWHELVAKGF 2088
V+RDIRLKELR+YTDYGRCSRPLFIV+KQ+LLIKKKDI +LQQRE+PEEGGWH+LV+KGF
Sbjct: 608 VVRDIRLKELRIYTDYGRCSRPLFIVDKQRLLIKKKDIHSLQQRESPEEGGWHDLVSKGF 667
Query: 2089 IEYVDTEEEETTMI 2130
IEY+DTEEEETTMI
Sbjct: 668 IEYIDTEEEETTMI 681
>ref|XP_007148168.1| hypothetical protein PHAVU_006G185800g [Phaseolus vulgaris]
gi|561021391|gb|ESW20162.1| hypothetical protein
PHAVU_006G185800g [Phaseolus vulgaris]
Length = 1194
Score = 1266 bits (3277), Expect = 0.0
Identities = 627/674 (93%), Positives = 655/674 (97%), Gaps = 3/674 (0%)
Frame = +1
Query: 118 EYDPSVNE---DEEDITQEDAWAVISAYFEEKGLVRQQLDSFDEFIQNTMQEIVDESADI 288
EYD + E DE+DITQEDAWAVISAYFEEKGLVRQQLDSFDEFIQNTMQEIVDESADI
Sbjct: 8 EYDQQMMEEEDDEDDITQEDAWAVISAYFEEKGLVRQQLDSFDEFIQNTMQEIVDESADI 67
Query: 289 EIRPESQHNPGRQPDFLETIYKISFGQIYLSKPMMTESDGETATLFPKAARLRNLTYSAP 468
EIRPESQHNPG Q DF ETIY+ISFGQIYLSKPMMTESDGETATLFPKAARLRNLTYSAP
Sbjct: 68 EIRPESQHNPGHQSDFAETIYRISFGQIYLSKPMMTESDGETATLFPKAARLRNLTYSAP 127
Query: 469 LYVDVTKRIIKKGHDCEEVTETQEFTKVFIGKVPIMLRSSYCTLYQNSEKDLTELGECPY 648
LYVDV+KR+IKKGHD EEVTETQ+FTKVFIGKVPIMLRSSYCTLYQNSEKDLTELGECPY
Sbjct: 128 LYVDVSKRVIKKGHDGEEVTETQDFTKVFIGKVPIMLRSSYCTLYQNSEKDLTELGECPY 187
Query: 649 DQGGYFIINGSEKVLIAQEKMSTNHVYVFKKRQPNKYAYVGEVRSMAESQNRPPSSMFVR 828
DQGGYFIINGSEKVLIAQEKMSTNHVYVFKKRQPNKYAYV EVRSMAESQNRPPS+MFVR
Sbjct: 188 DQGGYFIINGSEKVLIAQEKMSTNHVYVFKKRQPNKYAYVAEVRSMAESQNRPPSTMFVR 247
Query: 829 MLSRASAKGGSSGQYIRATLPYIRTEIPIIIVFRALGFVADKDILEHICYDFADTQMMEL 1008
MLSR S+KGGSSGQYIRATLPYIRTEIPIIIVFRALGFVADKDILEHICYDF+DTQMMEL
Sbjct: 248 MLSRTSSKGGSSGQYIRATLPYIRTEIPIIIVFRALGFVADKDILEHICYDFSDTQMMEL 307
Query: 1009 LRPSLEEAFVIQNQQVALDYIGKRGSTVGVTREKRIKYAKEILQKEMLPHVGVEEYCETK 1188
LRPSLEEAFVIQNQQVALDYIGKRG+TVGVT+EKRIKYAKEILQKEMLPHVGV EYCETK
Sbjct: 308 LRPSLEEAFVIQNQQVALDYIGKRGATVGVTKEKRIKYAKEILQKEMLPHVGVGEYCETK 367
Query: 1189 KAYYFGYIIHRLLLCALGRRPEDDRDHYGNKRLDLAGPLLGGLFRMLFRKLTRDVRGYVQ 1368
KAYYFGYIIHRLLLCALGRR EDDRDHYGNKRLDLAGPLLGGLFRMLFRKLTRDVRGYVQ
Sbjct: 368 KAYYFGYIIHRLLLCALGRRAEDDRDHYGNKRLDLAGPLLGGLFRMLFRKLTRDVRGYVQ 427
Query: 1369 KCVDNGKDVNLQFAIKAKTITSGLKYSLATGNWGQANAAGTRAGVSQVLNRLTYASTLSH 1548
KCVDNGKDVNLQFAIKAKTITSGLKYSLATGNWGQANAAGTRAGVSQVLNRLT+ASTLSH
Sbjct: 428 KCVDNGKDVNLQFAIKAKTITSGLKYSLATGNWGQANAAGTRAGVSQVLNRLTFASTLSH 487
Query: 1549 LRRLNSPIGREGKLAKPRQLHNSHWGMMCPAETPEGQACGLVKNLALMVYITVGSAARPI 1728
LRRLNSPIGREGKLAKPRQLHNS WGMMCPAETPEGQACGLVKNLALMVYITVGSAA PI
Sbjct: 488 LRRLNSPIGREGKLAKPRQLHNSQWGMMCPAETPEGQACGLVKNLALMVYITVGSAAYPI 547
Query: 1729 LEFLEEWSTENFEEISPAVIPQATKIFVNGCWVGIHRNPELLVKTLRQLRRQVDVNTEVG 1908
LEFLEEW TENFEEISPAVIPQATKIFVNG W+GIHR+P++LV+TLR+LRR+VDVNTEVG
Sbjct: 548 LEFLEEWGTENFEEISPAVIPQATKIFVNGSWMGIHRDPDMLVRTLRKLRRRVDVNTEVG 607
Query: 1909 VIRDIRLKELRLYTDYGRCSRPLFIVEKQQLLIKKKDIRALQQRETPEEGGWHELVAKGF 2088
V+RDIRLKELR+YTDYGRCSRPLFIV+KQ+LLIKK+DI ALQQRE+PEEGGWH+LV+KGF
Sbjct: 608 VVRDIRLKELRIYTDYGRCSRPLFIVDKQRLLIKKRDIHALQQRESPEEGGWHDLVSKGF 667
Query: 2089 IEYVDTEEEETTMI 2130
IEY+DTEEEETTMI
Sbjct: 668 IEYIDTEEEETTMI 681
>ref|XP_003533774.1| PREDICTED: DNA-directed RNA polymerase II subunit RPB2-like [Glycine
max]
Length = 1192
Score = 1266 bits (3276), Expect = 0.0
Identities = 627/674 (93%), Positives = 654/674 (97%), Gaps = 3/674 (0%)
Frame = +1
Query: 118 EYDPSVNE---DEEDITQEDAWAVISAYFEEKGLVRQQLDSFDEFIQNTMQEIVDESADI 288
EYD + E DEE+ITQEDAWAVISAYFEEKGLVRQQLDSFDEFIQNTMQEIVDESADI
Sbjct: 8 EYDEQMMEEEDDEEEITQEDAWAVISAYFEEKGLVRQQLDSFDEFIQNTMQEIVDESADI 67
Query: 289 EIRPESQHNPGRQPDFLETIYKISFGQIYLSKPMMTESDGETATLFPKAARLRNLTYSAP 468
EIRPESQHNPG Q DF ETIYKISFGQIYLSKPMMTESDGETATLFPKAARLRNLTYSAP
Sbjct: 68 EIRPESQHNPGHQSDFAETIYKISFGQIYLSKPMMTESDGETATLFPKAARLRNLTYSAP 127
Query: 469 LYVDVTKRIIKKGHDCEEVTETQEFTKVFIGKVPIMLRSSYCTLYQNSEKDLTELGECPY 648
LYVDV+KR+IKKGHD EEVTE Q+FTKVFIGKVPIMLRSSYCTLYQNSEKDLTELGECPY
Sbjct: 128 LYVDVSKRVIKKGHDGEEVTEAQDFTKVFIGKVPIMLRSSYCTLYQNSEKDLTELGECPY 187
Query: 649 DQGGYFIINGSEKVLIAQEKMSTNHVYVFKKRQPNKYAYVGEVRSMAESQNRPPSSMFVR 828
DQGGYFIINGSEKVLIAQEKMSTNHVYVFKKRQPNKYAYV EVRSMAESQNRPPS+MFVR
Sbjct: 188 DQGGYFIINGSEKVLIAQEKMSTNHVYVFKKRQPNKYAYVAEVRSMAESQNRPPSTMFVR 247
Query: 829 MLSRASAKGGSSGQYIRATLPYIRTEIPIIIVFRALGFVADKDILEHICYDFADTQMMEL 1008
MLSR S+KGGSSGQYIRATLPYIRTEIPIIIVFRALGFVADKDILEHICYDF+ TQMMEL
Sbjct: 248 MLSRTSSKGGSSGQYIRATLPYIRTEIPIIIVFRALGFVADKDILEHICYDFSYTQMMEL 307
Query: 1009 LRPSLEEAFVIQNQQVALDYIGKRGSTVGVTREKRIKYAKEILQKEMLPHVGVEEYCETK 1188
LRPSLEEAFVIQNQQVALDYIGKRG+TVGVT+EKRIKYAKEILQKEMLPHVGV EYCETK
Sbjct: 308 LRPSLEEAFVIQNQQVALDYIGKRGATVGVTKEKRIKYAKEILQKEMLPHVGVGEYCETK 367
Query: 1189 KAYYFGYIIHRLLLCALGRRPEDDRDHYGNKRLDLAGPLLGGLFRMLFRKLTRDVRGYVQ 1368
KAYYFGYIIHRLLLCALGRR EDDRDHYGNKRLDLAGPLLGGLFRMLFRKLTRDVRGYVQ
Sbjct: 368 KAYYFGYIIHRLLLCALGRRAEDDRDHYGNKRLDLAGPLLGGLFRMLFRKLTRDVRGYVQ 427
Query: 1369 KCVDNGKDVNLQFAIKAKTITSGLKYSLATGNWGQANAAGTRAGVSQVLNRLTYASTLSH 1548
KCVDNGKDVNLQFAIKAKTITSGLKYSLATGNWGQANAAGTRAGVSQVLNRLTYASTLSH
Sbjct: 428 KCVDNGKDVNLQFAIKAKTITSGLKYSLATGNWGQANAAGTRAGVSQVLNRLTYASTLSH 487
Query: 1549 LRRLNSPIGREGKLAKPRQLHNSHWGMMCPAETPEGQACGLVKNLALMVYITVGSAARPI 1728
LRRLNSPIGREGKLAKPRQLHNS WGMMCPAETPEGQACGLVKNLALMVYITVGSAA PI
Sbjct: 488 LRRLNSPIGREGKLAKPRQLHNSQWGMMCPAETPEGQACGLVKNLALMVYITVGSAAYPI 547
Query: 1729 LEFLEEWSTENFEEISPAVIPQATKIFVNGCWVGIHRNPELLVKTLRQLRRQVDVNTEVG 1908
LEFLEEW TENFEEISPAVIPQATKIFVNGCW+GIHR+P++LV+TL++LRR+VDVNTEVG
Sbjct: 548 LEFLEEWGTENFEEISPAVIPQATKIFVNGCWMGIHRDPDMLVRTLKKLRRRVDVNTEVG 607
Query: 1909 VIRDIRLKELRLYTDYGRCSRPLFIVEKQQLLIKKKDIRALQQRETPEEGGWHELVAKGF 2088
V+RDIRLKELR+YTDYGRCSRPLFIV+KQ+LLIKKKDI ALQQRE+PE+GGWH+LV+KGF
Sbjct: 608 VVRDIRLKELRIYTDYGRCSRPLFIVDKQRLLIKKKDIHALQQRESPEDGGWHDLVSKGF 667
Query: 2089 IEYVDTEEEETTMI 2130
IEY+DTEEEETTMI
Sbjct: 668 IEYIDTEEEETTMI 681
>ref|XP_007138707.1| hypothetical protein PHAVU_009G230400g [Phaseolus vulgaris]
gi|561011794|gb|ESW10701.1| hypothetical protein
PHAVU_009G230400g [Phaseolus vulgaris]
Length = 1196
Score = 1265 bits (3274), Expect = 0.0
Identities = 624/675 (92%), Positives = 655/675 (97%), Gaps = 3/675 (0%)
Frame = +1
Query: 115 DEYDPSVNEDEED---ITQEDAWAVISAYFEEKGLVRQQLDSFDEFIQNTMQEIVDESAD 285
DEY+ + EDEE+ ITQEDAWAVISAYFEEKGLVRQQLDSFDEFIQNTMQEIVDESAD
Sbjct: 5 DEYEEQMMEDEEEEDEITQEDAWAVISAYFEEKGLVRQQLDSFDEFIQNTMQEIVDESAD 64
Query: 286 IEIRPESQHNPGRQPDFLETIYKISFGQIYLSKPMMTESDGETATLFPKAARLRNLTYSA 465
IEIRPESQHNPG Q D ET+YKISFGQIYLSKPMMTESDGETA+LFPKAARLRNLTYSA
Sbjct: 65 IEIRPESQHNPGHQSDSAETVYKISFGQIYLSKPMMTESDGETASLFPKAARLRNLTYSA 124
Query: 466 PLYVDVTKRIIKKGHDCEEVTETQEFTKVFIGKVPIMLRSSYCTLYQNSEKDLTELGECP 645
PLYVDV+KR+IKKGHD EEVTETQ+FTKVFIGKVPIMLRSSYCTLYQNSEKDLTELGECP
Sbjct: 125 PLYVDVSKRVIKKGHDGEEVTETQDFTKVFIGKVPIMLRSSYCTLYQNSEKDLTELGECP 184
Query: 646 YDQGGYFIINGSEKVLIAQEKMSTNHVYVFKKRQPNKYAYVGEVRSMAESQNRPPSSMFV 825
YDQGGYFIINGSEKVLIAQEKMSTNHVYVFKKRQPNKYAYV EVRSMAESQNRPPS+MFV
Sbjct: 185 YDQGGYFIINGSEKVLIAQEKMSTNHVYVFKKRQPNKYAYVAEVRSMAESQNRPPSTMFV 244
Query: 826 RMLSRASAKGGSSGQYIRATLPYIRTEIPIIIVFRALGFVADKDILEHICYDFADTQMME 1005
RMLSR S+KGGSSGQYIRATLPYIRTEIPIIIVFRALGFVADKDILEHICYDF+DTQMM+
Sbjct: 245 RMLSRTSSKGGSSGQYIRATLPYIRTEIPIIIVFRALGFVADKDILEHICYDFSDTQMMD 304
Query: 1006 LLRPSLEEAFVIQNQQVALDYIGKRGSTVGVTREKRIKYAKEILQKEMLPHVGVEEYCET 1185
LLRPSLEEAFVIQNQQVALDYIGKRGSTVGVT+EKRIKYAKEILQKEMLPHVG+ EYCET
Sbjct: 305 LLRPSLEEAFVIQNQQVALDYIGKRGSTVGVTKEKRIKYAKEILQKEMLPHVGIGEYCET 364
Query: 1186 KKAYYFGYIIHRLLLCALGRRPEDDRDHYGNKRLDLAGPLLGGLFRMLFRKLTRDVRGYV 1365
KKAYYFGYIIHRLLLCALGRR EDDRDHYGNKRLDLAGPLLGGLFRMLFRKLTRDVR YV
Sbjct: 365 KKAYYFGYIIHRLLLCALGRRAEDDRDHYGNKRLDLAGPLLGGLFRMLFRKLTRDVRAYV 424
Query: 1366 QKCVDNGKDVNLQFAIKAKTITSGLKYSLATGNWGQANAAGTRAGVSQVLNRLTYASTLS 1545
QKCVDNGKDVNLQFAIKAKT+TSGLKYSLATGNWGQANAAGTRAGVSQVLNRLTYASTLS
Sbjct: 425 QKCVDNGKDVNLQFAIKAKTVTSGLKYSLATGNWGQANAAGTRAGVSQVLNRLTYASTLS 484
Query: 1546 HLRRLNSPIGREGKLAKPRQLHNSHWGMMCPAETPEGQACGLVKNLALMVYITVGSAARP 1725
HLRRLNSPIGREGKLAKPRQLHNS WGMMCPAETPEGQACGLVKNLALMVYITVGSAA P
Sbjct: 485 HLRRLNSPIGREGKLAKPRQLHNSQWGMMCPAETPEGQACGLVKNLALMVYITVGSAAYP 544
Query: 1726 ILEFLEEWSTENFEEISPAVIPQATKIFVNGCWVGIHRNPELLVKTLRQLRRQVDVNTEV 1905
ILEFLEEW TENFEEISPAVIPQATKIFVNGCW+GIHR+P++LV+TLR+LRR+VDVNTEV
Sbjct: 545 ILEFLEEWGTENFEEISPAVIPQATKIFVNGCWMGIHRDPDMLVRTLRKLRRRVDVNTEV 604
Query: 1906 GVIRDIRLKELRLYTDYGRCSRPLFIVEKQQLLIKKKDIRALQQRETPEEGGWHELVAKG 2085
GV+RDIRLKELR+YTDYGRCSRPLFIV++Q+LLIKKKDI ALQQRE+PEEGGWH+LV+KG
Sbjct: 605 GVVRDIRLKELRIYTDYGRCSRPLFIVDRQRLLIKKKDIHALQQRESPEEGGWHDLVSKG 664
Query: 2086 FIEYVDTEEEETTMI 2130
FIEY+DTEEEETTMI
Sbjct: 665 FIEYIDTEEEETTMI 679
>ref|XP_003547482.1| PREDICTED: DNA-directed RNA polymerase II subunit RPB2-like [Glycine
max]
Length = 1193
Score = 1264 bits (3272), Expect = 0.0
Identities = 626/679 (92%), Positives = 655/679 (96%)
Frame = +1
Query: 94 LEKMYGGDEYDPSVNEDEEDITQEDAWAVISAYFEEKGLVRQQLDSFDEFIQNTMQEIVD 273
LE+ DE ++DEE+ITQEDAWAVISAYFEEKGLVRQQLDSFDEFIQNTMQEIVD
Sbjct: 3 LEEEQEYDEQMMEEDDDEEEITQEDAWAVISAYFEEKGLVRQQLDSFDEFIQNTMQEIVD 62
Query: 274 ESADIEIRPESQHNPGRQPDFLETIYKISFGQIYLSKPMMTESDGETATLFPKAARLRNL 453
ESADIEIRPESQHNPG Q DF ETIYKISFGQIYLSKPMMTESDGETATLFPKAARLRNL
Sbjct: 63 ESADIEIRPESQHNPGHQSDFAETIYKISFGQIYLSKPMMTESDGETATLFPKAARLRNL 122
Query: 454 TYSAPLYVDVTKRIIKKGHDCEEVTETQEFTKVFIGKVPIMLRSSYCTLYQNSEKDLTEL 633
TYSAPLYVDV+KR++KKGHD EEVTETQ+ TKVFIGKVPIMLRSSYCTLYQNSEKDLTEL
Sbjct: 123 TYSAPLYVDVSKRVVKKGHDGEEVTETQDLTKVFIGKVPIMLRSSYCTLYQNSEKDLTEL 182
Query: 634 GECPYDQGGYFIINGSEKVLIAQEKMSTNHVYVFKKRQPNKYAYVGEVRSMAESQNRPPS 813
GECPYDQGGYFIINGSEKVLIAQEKMSTNHVYVFKKRQPNKYAYV EVRSMAESQNRPPS
Sbjct: 183 GECPYDQGGYFIINGSEKVLIAQEKMSTNHVYVFKKRQPNKYAYVAEVRSMAESQNRPPS 242
Query: 814 SMFVRMLSRASAKGGSSGQYIRATLPYIRTEIPIIIVFRALGFVADKDILEHICYDFADT 993
+MFVRMLSR S+KGGSSGQYIRATLPYIRTEIPIIIVFRALGFVADKDILEHICYDF+DT
Sbjct: 243 TMFVRMLSRTSSKGGSSGQYIRATLPYIRTEIPIIIVFRALGFVADKDILEHICYDFSDT 302
Query: 994 QMMELLRPSLEEAFVIQNQQVALDYIGKRGSTVGVTREKRIKYAKEILQKEMLPHVGVEE 1173
MMELLRPSLEEAFVIQNQQVALDYIGKRG+TVGVT+EKRIKYAKEILQKEMLPHVGV E
Sbjct: 303 LMMELLRPSLEEAFVIQNQQVALDYIGKRGATVGVTKEKRIKYAKEILQKEMLPHVGVGE 362
Query: 1174 YCETKKAYYFGYIIHRLLLCALGRRPEDDRDHYGNKRLDLAGPLLGGLFRMLFRKLTRDV 1353
YCETKKAYYFGYIIHRLLLCALGRR EDDRDHYGNKRLDLAGPLLGGLFRMLFRKLTRDV
Sbjct: 363 YCETKKAYYFGYIIHRLLLCALGRRAEDDRDHYGNKRLDLAGPLLGGLFRMLFRKLTRDV 422
Query: 1354 RGYVQKCVDNGKDVNLQFAIKAKTITSGLKYSLATGNWGQANAAGTRAGVSQVLNRLTYA 1533
RGYVQKCVDNGKDVNLQFAIKAKTITSGLKYSLATGNWGQANAAGTRAGVSQVLNRLTYA
Sbjct: 423 RGYVQKCVDNGKDVNLQFAIKAKTITSGLKYSLATGNWGQANAAGTRAGVSQVLNRLTYA 482
Query: 1534 STLSHLRRLNSPIGREGKLAKPRQLHNSHWGMMCPAETPEGQACGLVKNLALMVYITVGS 1713
STLSHLRRLNSPIGREGKLAKPRQLHNS WGMMCPAETPEGQACGLVKNLALMVYITVGS
Sbjct: 483 STLSHLRRLNSPIGREGKLAKPRQLHNSQWGMMCPAETPEGQACGLVKNLALMVYITVGS 542
Query: 1714 AARPILEFLEEWSTENFEEISPAVIPQATKIFVNGCWVGIHRNPELLVKTLRQLRRQVDV 1893
AA PILEFLEEW TENFEEISPAVIPQATKIFVNGCW+GIHR+P++LV+TLR+LRR+VDV
Sbjct: 543 AAYPILEFLEEWGTENFEEISPAVIPQATKIFVNGCWMGIHRDPDMLVRTLRKLRRRVDV 602
Query: 1894 NTEVGVIRDIRLKELRLYTDYGRCSRPLFIVEKQQLLIKKKDIRALQQRETPEEGGWHEL 2073
NTEVGV+RDI LKELR+YTDYGRCSRPLFIV+KQ+LLIKKKDI ALQQRE+PE+GGWH+L
Sbjct: 603 NTEVGVVRDIILKELRIYTDYGRCSRPLFIVDKQRLLIKKKDIHALQQRESPEDGGWHDL 662
Query: 2074 VAKGFIEYVDTEEEETTMI 2130
V+KGFIEY+DTEEEETTMI
Sbjct: 663 VSKGFIEYIDTEEEETTMI 681
>ref|XP_007214559.1| hypothetical protein PRUPE_ppa000425mg [Prunus persica]
gi|462410424|gb|EMJ15758.1| hypothetical protein
PRUPE_ppa000425mg [Prunus persica]
Length = 1192
Score = 1264 bits (3270), Expect = 0.0
Identities = 624/678 (92%), Positives = 654/678 (96%)
Frame = +1
Query: 97 EKMYGGDEYDPSVNEDEEDITQEDAWAVISAYFEEKGLVRQQLDSFDEFIQNTMQEIVDE 276
E Y +Y+ ++DE++ITQEDAWAVISAYFEEKGLVRQQLDSFDEFIQNTMQEIVDE
Sbjct: 4 EPEYDDQQYN---DDDEDEITQEDAWAVISAYFEEKGLVRQQLDSFDEFIQNTMQEIVDE 60
Query: 277 SADIEIRPESQHNPGRQPDFLETIYKISFGQIYLSKPMMTESDGETATLFPKAARLRNLT 456
SADIEIRPESQHNPG QPDF ET Y+I FGQIYLSKPMMTESDGETATLFPKAARLRNLT
Sbjct: 61 SADIEIRPESQHNPGHQPDFAETTYRIKFGQIYLSKPMMTESDGETATLFPKAARLRNLT 120
Query: 457 YSAPLYVDVTKRIIKKGHDCEEVTETQEFTKVFIGKVPIMLRSSYCTLYQNSEKDLTELG 636
YSAPLYVDV+K I+KKGHD EEVTETQ+FTKVFIGKVPIMLRSSYCTLYQNSEKDLTELG
Sbjct: 121 YSAPLYVDVSKSIVKKGHDGEEVTETQDFTKVFIGKVPIMLRSSYCTLYQNSEKDLTELG 180
Query: 637 ECPYDQGGYFIINGSEKVLIAQEKMSTNHVYVFKKRQPNKYAYVGEVRSMAESQNRPPSS 816
ECPYDQGGYFIINGSEKVLIAQEKMSTNHVYVFKKRQPNKYAYV EVRSMAESQNRPPS+
Sbjct: 181 ECPYDQGGYFIINGSEKVLIAQEKMSTNHVYVFKKRQPNKYAYVAEVRSMAESQNRPPST 240
Query: 817 MFVRMLSRASAKGGSSGQYIRATLPYIRTEIPIIIVFRALGFVADKDILEHICYDFADTQ 996
MFVRML+R S+KGGSSGQYIRATLPYIR EIPIIIVFRALGFVADKDILEHICYDF+DTQ
Sbjct: 241 MFVRMLARTSSKGGSSGQYIRATLPYIRAEIPIIIVFRALGFVADKDILEHICYDFSDTQ 300
Query: 997 MMELLRPSLEEAFVIQNQQVALDYIGKRGSTVGVTREKRIKYAKEILQKEMLPHVGVEEY 1176
MMELLRPSLEEAFVIQNQQVALDYIGKRG+TVGV+REKRIKYAKEILQKEMLPHVGV E+
Sbjct: 301 MMELLRPSLEEAFVIQNQQVALDYIGKRGATVGVSREKRIKYAKEILQKEMLPHVGVGEF 360
Query: 1177 CETKKAYYFGYIIHRLLLCALGRRPEDDRDHYGNKRLDLAGPLLGGLFRMLFRKLTRDVR 1356
CETKKAYYFGYIIHRLLLCALGRR EDDRDHYGNKRLDLAGPLLGGLFRMLFRKLTRDVR
Sbjct: 361 CETKKAYYFGYIIHRLLLCALGRRAEDDRDHYGNKRLDLAGPLLGGLFRMLFRKLTRDVR 420
Query: 1357 GYVQKCVDNGKDVNLQFAIKAKTITSGLKYSLATGNWGQANAAGTRAGVSQVLNRLTYAS 1536
GYVQKCVDNGK++NLQFAIKAKTITSGLKYSLATGNWGQANAAGTRAGVSQVLNRLTYAS
Sbjct: 421 GYVQKCVDNGKELNLQFAIKAKTITSGLKYSLATGNWGQANAAGTRAGVSQVLNRLTYAS 480
Query: 1537 TLSHLRRLNSPIGREGKLAKPRQLHNSHWGMMCPAETPEGQACGLVKNLALMVYITVGSA 1716
TLSHLRRLNSPIGREGKLAKPRQLHNS WGMMCPAETPEGQACGLVKNLALMVYITVGSA
Sbjct: 481 TLSHLRRLNSPIGREGKLAKPRQLHNSQWGMMCPAETPEGQACGLVKNLALMVYITVGSA 540
Query: 1717 ARPILEFLEEWSTENFEEISPAVIPQATKIFVNGCWVGIHRNPELLVKTLRQLRRQVDVN 1896
A PILEFLEEW TENFEEISPAVIPQATKIFVNGCWVGIHR+PE+LVKTLR+LRR+VDVN
Sbjct: 541 AYPILEFLEEWGTENFEEISPAVIPQATKIFVNGCWVGIHRDPEMLVKTLRKLRRRVDVN 600
Query: 1897 TEVGVIRDIRLKELRLYTDYGRCSRPLFIVEKQQLLIKKKDIRALQQRETPEEGGWHELV 2076
TEVGV+RDIRLKELR+YTDYGRCSRPLFIV+KQ+LLIKKKDI ALQQRE PE+GGWH+LV
Sbjct: 601 TEVGVVRDIRLKELRIYTDYGRCSRPLFIVDKQRLLIKKKDIHALQQRENPEDGGWHDLV 660
Query: 2077 AKGFIEYVDTEEEETTMI 2130
AKGFIEY+DTEEEETTMI
Sbjct: 661 AKGFIEYIDTEEEETTMI 678
>ref|XP_003589372.1| DNA-directed RNA polymerase [Medicago truncatula]
gi|355478420|gb|AES59623.1| DNA-directed RNA polymerase
[Medicago truncatula]
Length = 1213
Score = 1264 bits (3270), Expect = 0.0
Identities = 633/692 (91%), Positives = 659/692 (95%), Gaps = 20/692 (2%)
Frame = +1
Query: 115 DEYDPSVNE--DEEDITQEDAWAVISAYFEEKGLVRQQLDSFDEFIQNTMQEIVDESADI 288
+E+D + E DEE+ITQEDAWAVISAYFEEKGLVRQQLDSFDEFIQNTMQEIVDESADI
Sbjct: 9 NEFDQQMEEEDDEEEITQEDAWAVISAYFEEKGLVRQQLDSFDEFIQNTMQEIVDESADI 68
Query: 289 EIRPESQHNPGRQPDFLETIYKISFGQIYLSKPMMTESDGETATLFPKAARLRNLTYSAP 468
EIRPESQHNPG Q DF ETIYKISFGQIYLSKPMMTESDGETATLFPKAARLRNLTYSAP
Sbjct: 69 EIRPESQHNPGHQSDFAETIYKISFGQIYLSKPMMTESDGETATLFPKAARLRNLTYSAP 128
Query: 469 LYVDVTKRIIKKGHDCEEVTETQEFTKVFIGKVPIMLRSSYCTLYQNSEKDLTELGECPY 648
LYVDV+KR+IKKGHD EEVTETQ+FTKVFIGKVPIMLRSSYCTLYQNSEKDLTELGECPY
Sbjct: 129 LYVDVSKRVIKKGHDGEEVTETQDFTKVFIGKVPIMLRSSYCTLYQNSEKDLTELGECPY 188
Query: 649 DQGGYFIINGSEKVLIAQEKMSTNHVYVFKKRQPNKYAYVGEVRSMAESQNRPPSSMFVR 828
DQGGYFIINGSEKVLIAQEKMSTNHVYVFKKRQPNKYAYVGEVRSMAESQNRPPS+MFVR
Sbjct: 189 DQGGYFIINGSEKVLIAQEKMSTNHVYVFKKRQPNKYAYVGEVRSMAESQNRPPSTMFVR 248
Query: 829 MLSRASAKGGSSGQYIRATLPYIRTEIPIIIVFRALGFVADKDILEHICYDFADTQMMEL 1008
MLSRASAKGGSSGQYIRATLPYIRTEIPIIIVFRALGFVADKDILEHICYDFADTQMMEL
Sbjct: 249 MLSRASAKGGSSGQYIRATLPYIRTEIPIIIVFRALGFVADKDILEHICYDFADTQMMEL 308
Query: 1009 LRPSLEEAFVIQNQQVALDYIGKRGSTVGVTREKRIKYAKEILQKEMLPHVGVEEYCETK 1188
LRPSLEEAFVIQNQQVALDYIGKRGSTVGVT+EKRIKYAK+ILQKEMLPHVGV EYCETK
Sbjct: 309 LRPSLEEAFVIQNQQVALDYIGKRGSTVGVTKEKRIKYAKDILQKEMLPHVGVGEYCETK 368
Query: 1189 KAYYFGYIIHRLLLCALGRRPEDDRDHYGNKRLDLAGPLLGGLFRMLFRKLTRDVRGYVQ 1368
KAYYFGYIIHRLLLCALGRR EDDRDHYGNKRLDLAGPLLGGLFRMLFRKLTRDVRGYVQ
Sbjct: 369 KAYYFGYIIHRLLLCALGRRAEDDRDHYGNKRLDLAGPLLGGLFRMLFRKLTRDVRGYVQ 428
Query: 1369 KCVDNGKDVNLQFAIKAKTITSGLKYSLATGNWGQANAAGTRAGVSQVLNRLTYASTLSH 1548
KCVDNGKDVNLQFAIKAKTITSGLKYSLATGNWGQANAAGTRAGVSQVLNRLTYASTLSH
Sbjct: 429 KCVDNGKDVNLQFAIKAKTITSGLKYSLATGNWGQANAAGTRAGVSQVLNRLTYASTLSH 488
Query: 1549 LRRLNSPIGREGKLAKPRQLHNSHWGMMCPAETPEGQACGLVKNLALMVYITVGSAARPI 1728
LRRLNSPIGREGKLAKPRQLHNS WGMMCPAETPEGQACGLVKNLALMVYITVGSAA PI
Sbjct: 489 LRRLNSPIGREGKLAKPRQLHNSQWGMMCPAETPEGQACGLVKNLALMVYITVGSAAYPI 548
Query: 1729 LEFLEEWSTENFE--------EISPAVIPQATKIFVNGCWVGIHRNPELLVKTLRQLRR- 1881
LEFLEEW TENFE EISPAVIPQATKIFVNGCW+GIHR+P++LV+TLR+LRR
Sbjct: 549 LEFLEEWGTENFEVLVISFIKEISPAVIPQATKIFVNGCWMGIHRDPDMLVRTLRKLRRR 608
Query: 1882 ---------QVDVNTEVGVIRDIRLKELRLYTDYGRCSRPLFIVEKQQLLIKKKDIRALQ 2034
QVDVNTEVGV+RDIRLKELR+YTDYGRCSRPLFIV+KQ+LLIKKKDI +LQ
Sbjct: 609 FSAEGFDVVQVDVNTEVGVVRDIRLKELRIYTDYGRCSRPLFIVDKQRLLIKKKDIHSLQ 668
Query: 2035 QRETPEEGGWHELVAKGFIEYVDTEEEETTMI 2130
QRE+PE+GGWH+LV+KGFIEY+DTEEEETTMI
Sbjct: 669 QRESPEDGGWHDLVSKGFIEYIDTEEEETTMI 700
>gb|AAY89348.1| RNA polymerase II second largest subunit [Antirrhinum majus]
Length = 1200
Score = 1263 bits (3267), Expect = 0.0
Identities = 628/685 (91%), Positives = 656/685 (95%), Gaps = 6/685 (0%)
Frame = +1
Query: 94 LEKMYGGDEYDPSVN------EDEEDITQEDAWAVISAYFEEKGLVRQQLDSFDEFIQNT 255
LE+ Y EY+ E+EEDI+QEDAWAVISAYFEEKGLVRQQLDSFDEFIQNT
Sbjct: 3 LEEEYYEQEYNNEAENENDEEEEEEDISQEDAWAVISAYFEEKGLVRQQLDSFDEFIQNT 62
Query: 256 MQEIVDESADIEIRPESQHNPGRQPDFLETIYKISFGQIYLSKPMMTESDGETATLFPKA 435
MQEIVDESADIEIRPESQHNPG+QPDF ETIYKISFGQIYLSKPMMTESDGETATLFPKA
Sbjct: 63 MQEIVDESADIEIRPESQHNPGQQPDFAETIYKISFGQIYLSKPMMTESDGETATLFPKA 122
Query: 436 ARLRNLTYSAPLYVDVTKRIIKKGHDCEEVTETQEFTKVFIGKVPIMLRSSYCTLYQNSE 615
ARLRNLTYSAPLYVDV+KR+IKKGHD EEVTETQ+FTKVFIGKVPIMLRSSYCTLYQNSE
Sbjct: 123 ARLRNLTYSAPLYVDVSKRVIKKGHDGEEVTETQDFTKVFIGKVPIMLRSSYCTLYQNSE 182
Query: 616 KDLTELGECPYDQGGYFIINGSEKVLIAQEKMSTNHVYVFKKRQPNKYAYVGEVRSMAES 795
KDLTELGECP DQGGYFIINGSEKVLIAQEKMSTNHVYVFKKRQPNKYAYV EVRSMAE+
Sbjct: 183 KDLTELGECPLDQGGYFIINGSEKVLIAQEKMSTNHVYVFKKRQPNKYAYVAEVRSMAEA 242
Query: 796 QNRPPSSMFVRMLSRASAKGGSSGQYIRATLPYIRTEIPIIIVFRALGFVADKDILEHIC 975
QNRPPS+MFVRMLSR SAKGGSSGQYIRATLPYIRTEIPIIIVFRALGFVADKDILEHIC
Sbjct: 243 QNRPPSTMFVRMLSRTSAKGGSSGQYIRATLPYIRTEIPIIIVFRALGFVADKDILEHIC 302
Query: 976 YDFADTQMMELLRPSLEEAFVIQNQQVALDYIGKRGSTVGVTREKRIKYAKEILQKEMLP 1155
++ +DTQMMELLRPSLEEAFVIQNQQVALDYIGKRGSTVGVT+EKRIKYAKEILQKEMLP
Sbjct: 303 FNSSDTQMMELLRPSLEEAFVIQNQQVALDYIGKRGSTVGVTKEKRIKYAKEILQKEMLP 362
Query: 1156 HVGVEEYCETKKAYYFGYIIHRLLLCALGRRPEDDRDHYGNKRLDLAGPLLGGLFRMLFR 1335
HVGV EYCETKKAYYFGYIIHRLLLCALGRR EDDRDHYGNKRLDLAGPLLGGLFRMLFR
Sbjct: 363 HVGVGEYCETKKAYYFGYIIHRLLLCALGRRAEDDRDHYGNKRLDLAGPLLGGLFRMLFR 422
Query: 1336 KLTRDVRGYVQKCVDNGKDVNLQFAIKAKTITSGLKYSLATGNWGQANAAGTRAGVSQVL 1515
KLTRDVR YVQKCVDNGKDVNLQF IKAKTITSGLKYSLATGNWGQANAAGTRAGVSQVL
Sbjct: 423 KLTRDVRSYVQKCVDNGKDVNLQFXIKAKTITSGLKYSLATGNWGQANAAGTRAGVSQVL 482
Query: 1516 NRLTYASTLSHLRRLNSPIGREGKLAKPRQLHNSHWGMMCPAETPEGQACGLVKNLALMV 1695
NRLTYASTLSHLRRL+SPIGREGKLAKPRQLHNS WGMMCPAETPEGQACGLVKNLALMV
Sbjct: 483 NRLTYASTLSHLRRLBSPIGREGKLAKPRQLHNSQWGMMCPAETPEGQACGLVKNLALMV 542
Query: 1696 YITVGSAARPILEFLEEWSTENFEEISPAVIPQATKIFVNGCWVGIHRNPELLVKTLRQL 1875
YITVGSAA PILEFLEEW TENFEEISPAVIPQATKIFVNG WVGIHRNP++LV TLR+L
Sbjct: 543 YITVGSAAYPILEFLEEWGTENFEEISPAVIPQATKIFVNGLWVGIHRNPDMLVSTLRRL 602
Query: 1876 RRQVDVNTEVGVIRDIRLKELRLYTDYGRCSRPLFIVEKQQLLIKKKDIRALQQRETPEE 2055
RR+VDVNTEVGV+RDIRLKELR+YTDYGRCSRPLFIVEKQ+LLIKKKD++ALQQRE+P++
Sbjct: 603 RRRVDVNTEVGVVRDIRLKELRIYTDYGRCSRPLFIVEKQRLLIKKKDVQALQQRESPDD 662
Query: 2056 GGWHELVAKGFIEYVDTEEEETTMI 2130
GGWHELVAKGFIEY+DTEEEETTMI
Sbjct: 663 GGWHELVAKGFIEYIDTEEEETTMI 687