BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Akebia27_contig00007727
         (1814 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002268044.2| PREDICTED: DNA-directed RNA polymerase III s...   356   2e-95
emb|CBI17549.3| unnamed protein product [Vitis vinifera]              355   5e-95
ref|XP_002525112.1| DNA-directed RNA polymerase, putative [Ricin...   317   9e-84
ref|XP_004149158.1| PREDICTED: DNA-directed RNA polymerase III s...   291   5e-76
ref|XP_004164787.1| PREDICTED: LOW QUALITY PROTEIN: DNA-directed...   291   9e-76
ref|XP_006425717.1| hypothetical protein CICLE_v10025048mg [Citr...   287   1e-74
ref|XP_007046991.1| SIN-like family protein, putative isoform 1 ...   284   8e-74
ref|XP_007046992.1| Transcription regulators,zinc ion binding, p...   280   2e-72
ref|XP_002310208.2| hypothetical protein POPTR_0007s12540g [Popu...   276   2e-71
ref|XP_007201935.1| hypothetical protein PRUPE_ppa002228mg [Prun...   274   8e-71
gb|EXB77882.1| DNA-directed RNA polymerase III subunit RPC5 [Mor...   272   4e-70
gb|AEI98616.1| hypothetical protein 111O18.3 [Coffea canephora]       267   1e-68
ref|XP_007046993.1| Transcription regulators,zinc ion binding, p...   266   2e-68
ref|XP_006395054.1| hypothetical protein EUTSA_v10003751mg [Eutr...   265   4e-68
ref|XP_006425716.1| hypothetical protein CICLE_v10025048mg [Citr...   264   1e-67
ref|XP_002863995.1| hypothetical protein ARALYDRAFT_495012 [Arab...   258   6e-66
ref|XP_004300617.1| PREDICTED: DNA-directed RNA polymerase III s...   256   2e-65
ref|XP_006355442.1| PREDICTED: DNA-directed RNA polymerase III s...   256   2e-65
ref|NP_199764.1| SIN-like protein [Arabidopsis thaliana] gi|1017...   255   5e-65
ref|XP_006355441.1| PREDICTED: DNA-directed RNA polymerase III s...   255   5e-65

>ref|XP_002268044.2| PREDICTED: DNA-directed RNA polymerase III subunit RPC5 [Vitis
            vinifera]
          Length = 672

 Score =  356 bits (913), Expect = 2e-95
 Identities = 197/403 (48%), Positives = 257/403 (63%), Gaps = 4/403 (0%)
 Frame = +1

Query: 586  QPWVSLEYYGIDSDFSSRYLQKMTPQESSPIQFSMSPYAYVNSICP-GSSTENNRAKGPP 762
            Q WV L+Y+  +SDFS+RYLQKM  +++SPIQF MSPY YVNS+CP G S ++NR+KG  
Sbjct: 257  QSWVPLKYHSSESDFSARYLQKMVAEDNSPIQFLMSPYEYVNSLCPPGVSNDDNRSKGLS 316

Query: 763  RRYLLTLPLDQRFKVLFSKGPQVHRFNFLKNLSPDDSNEEVLEVLQRYAYLIQGLWVSKT 942
            RR+LL++PL++RFK L  +GP VHRF+ LK+ +PD+S E+VL VL ++A+L+QGLWV K+
Sbjct: 317  RRFLLSMPLEERFKTLLCEGPPVHRFSALKHFAPDNSVEDVLGVLTKHAHLVQGLWVPKS 376

Query: 943  SLLQP--KGAEYPIRDYILLLFRKNTLISNKLINDSGLSKETMKQVLIALAIYRQTFRDW 1116
            SLL P  +G     RDYILLLF K  LI+   ++  G   + +K  L  LA+ R +FRDW
Sbjct: 377  SLLFPGGQGVAPLARDYILLLFSKGPLINYSQVDVPGSLNKALKGFLSILAVERPSFRDW 436

Query: 1117 KFKEPTDVSFLKSHPDIVRKQEHDWKDREKKIMENLR-PLRDGTAIRNSLNPSLTSRLGT 1293
            KFKEPTDVSF+K HPDIVR+Q   W+  EK+I + +    R G   +NS  PS+ ++ GT
Sbjct: 437  KFKEPTDVSFMKLHPDIVREQRRVWESLEKQITDIIHGGGRRGPVTKNSGKPSIANKTGT 496

Query: 1294 SGNVDQGAARGVTGTSSIDTITMTDATREALNKALVEVFRNHKVCSLQLINDCLRDQAVF 1473
            S   D GA R   GT  +    M+  TREAL KAL EVFR HKVCS QLI   LRD AV 
Sbjct: 497  STKSD-GATRATNGT-PVRRTAMSAETREALPKALEEVFRLHKVCSFQLICQALRDLAVS 554

Query: 1474 KSTRPKXXXXXXXXXXXXXXXHLPELQSFITQIAINIHGVYVLKSSDSPTLNPFRNVVIN 1653
            KST PK                  EL + I++ A  +HGVYV K+S+    NP R VV++
Sbjct: 555  KSTSPKVDPRTFVAAAYGADAPQEELHAIISKYATTVHGVYVWKTSEHSEHNPLRKVVVD 614

Query: 1654 LFCGKPPNXXXXXXXXXXXXXXXLNRDITNSEYTQVLTELCVS 1782
            LFCGK PN               L ++IT  EY +V++ELC S
Sbjct: 615  LFCGKEPNAKLKRADIMEAAKIALKKEITTHEYNKVVSELCES 657


>emb|CBI17549.3| unnamed protein product [Vitis vinifera]
          Length = 688

 Score =  355 bits (910), Expect = 5e-95
 Identities = 196/403 (48%), Positives = 257/403 (63%), Gaps = 4/403 (0%)
 Frame = +1

Query: 586  QPWVSLEYYGIDSDFSSRYLQKMTPQESSPIQFSMSPYAYVNSICP-GSSTENNRAKGPP 762
            + WV L+Y+  +SDFS+RYLQKM  +++SPIQF MSPY YVNS+CP G S ++NR+KG  
Sbjct: 273  ESWVPLKYHSSESDFSARYLQKMVAEDNSPIQFLMSPYEYVNSLCPPGVSNDDNRSKGLS 332

Query: 763  RRYLLTLPLDQRFKVLFSKGPQVHRFNFLKNLSPDDSNEEVLEVLQRYAYLIQGLWVSKT 942
            RR+LL++PL++RFK L  +GP VHRF+ LK+ +PD+S E+VL VL ++A+L+QGLWV K+
Sbjct: 333  RRFLLSMPLEERFKTLLCEGPPVHRFSALKHFAPDNSVEDVLGVLTKHAHLVQGLWVPKS 392

Query: 943  SLLQP--KGAEYPIRDYILLLFRKNTLISNKLINDSGLSKETMKQVLIALAIYRQTFRDW 1116
            SLL P  +G     RDYILLLF K  LI+   ++  G   + +K  L  LA+ R +FRDW
Sbjct: 393  SLLFPGGQGVAPLARDYILLLFSKGPLINYSQVDVPGSLNKALKGFLSILAVERPSFRDW 452

Query: 1117 KFKEPTDVSFLKSHPDIVRKQEHDWKDREKKIMENLR-PLRDGTAIRNSLNPSLTSRLGT 1293
            KFKEPTDVSF+K HPDIVR+Q   W+  EK+I + +    R G   +NS  PS+ ++ GT
Sbjct: 453  KFKEPTDVSFMKLHPDIVREQRRVWESLEKQITDIIHGGGRRGPVTKNSGKPSIANKTGT 512

Query: 1294 SGNVDQGAARGVTGTSSIDTITMTDATREALNKALVEVFRNHKVCSLQLINDCLRDQAVF 1473
            S   D GA R   GT  +    M+  TREAL KAL EVFR HKVCS QLI   LRD AV 
Sbjct: 513  STKSD-GATRATNGT-PVRRTAMSAETREALPKALEEVFRLHKVCSFQLICQALRDLAVS 570

Query: 1474 KSTRPKXXXXXXXXXXXXXXXHLPELQSFITQIAINIHGVYVLKSSDSPTLNPFRNVVIN 1653
            KST PK                  EL + I++ A  +HGVYV K+S+    NP R VV++
Sbjct: 571  KSTSPKVDPRTFVAAAYGADAPQEELHAIISKYATTVHGVYVWKTSEHSEHNPLRKVVVD 630

Query: 1654 LFCGKPPNXXXXXXXXXXXXXXXLNRDITNSEYTQVLTELCVS 1782
            LFCGK PN               L ++IT  EY +V++ELC S
Sbjct: 631  LFCGKEPNAKLKRADIMEAAKIALKKEITTHEYNKVVSELCES 673


>ref|XP_002525112.1| DNA-directed RNA polymerase, putative [Ricinus communis]
            gi|223535571|gb|EEF37239.1| DNA-directed RNA polymerase,
            putative [Ricinus communis]
          Length = 677

 Score =  317 bits (813), Expect = 9e-84
 Identities = 176/396 (44%), Positives = 246/396 (62%), Gaps = 4/396 (1%)
 Frame = +1

Query: 586  QPWVSLEYYGIDSDFSSRYLQKMTPQESSPIQFSMSPYAYVNSICPGSSTENNRAKGPPR 765
            Q W+SL+Y+G  SDFSSRYL+KM  QESSP++F+M+PY Y++S+CP +S E  ++KGPPR
Sbjct: 268  QCWISLKYHGSKSDFSSRYLEKMIAQESSPMEFTMTPYDYMSSLCPVASNEKTKSKGPPR 327

Query: 766  RYLLTLPLDQRFKVLFSKGPQVHRFNFLKNLSPDDSNEEVLEVLQRYAYLIQGLWVSKTS 945
            R+LL+LPL +R K L  +GP V RF+ LK+ +PDDS E+VL+VLQ Y  L+QGLW  K+S
Sbjct: 328  RFLLSLPLAERLKKLILEGPPVQRFSVLKHFAPDDSVEDVLKVLQEYGQLVQGLWAPKSS 387

Query: 946  LLQP-KGAEYPIRDYILLLFRKNTLISNKLINDSGLSKETMKQVLIALAIYRQTFRDWKF 1122
            LL P   ++  IRDY+LLLF KN +I++  +N     KE +K  L   A+ R +F+DWKF
Sbjct: 388  LLFPDANSKQGIRDYVLLLFSKNLVINSSQVNFPVKIKEEIKSFLNLFAVERPSFKDWKF 447

Query: 1123 KEPTDVSFLKSHPDIVRKQEHDWKDREKKIMENLRPLRDGTA-IRNSL-NPSLTSRLGTS 1296
            KE TD +F+K +PDIV+KQE  W + EK++ +     R G A ++N++  P +       
Sbjct: 448  KEHTDTTFIKLYPDIVKKQEEAWDNTEKRLSKVFD--RSGKASMKNAIPKPPMVHNTVKH 505

Query: 1297 GNVDQGAARGVTGTSSIDTITMTDATREALNKALVEVFRNHKVCSLQLINDCLRDQAVFK 1476
             + ++   +  +G   +   T+T  TREAL KAL +VF++HKVCS QLI   LRD AV +
Sbjct: 506  LDSEKSMPKIASGMRRLTKTTITVETREALLKALPKVFQSHKVCSFQLICQGLRDLAVSQ 565

Query: 1477 STRPKXXXXXXXXXXXXXXXHLPELQSFITQIAINIHGVYVLKSS-DSPTLNPFRNVVIN 1653
            ST PK                  ELQ  I+Q+A NIHG YVLKSS + P  +  R V+I+
Sbjct: 566  STLPKADPRIAVAAASGADAPPEELQEIISQVATNIHGFYVLKSSPEHPQYDELRKVIID 625

Query: 1654 LFCGKPPNXXXXXXXXXXXXXXXLNRDITNSEYTQV 1761
            L   + PN                 RD+TN EY ++
Sbjct: 626  LLLARGPNAKLKKAEVFEAARLAFKRDVTNIEYNKL 661


>ref|XP_004149158.1| PREDICTED: DNA-directed RNA polymerase III subunit RPC5-like [Cucumis
            sativus]
          Length = 702

 Score =  291 bits (746), Expect = 5e-76
 Identities = 163/401 (40%), Positives = 233/401 (58%), Gaps = 4/401 (0%)
 Frame = +1

Query: 592  WVSLEYYGIDSDFSSRYLQKMTPQESSPIQFSMSPYAYVNSICPGSSTENNRAKGPPRRY 771
            W+ L+YYG++SD S+R+LQ M  Q  SP+QFSMSP+ Y++S+CPG+ST  N+ KGP ++Y
Sbjct: 290  WIPLKYYGLESDLSTRHLQSMVSQTVSPMQFSMSPHDYMDSLCPGTSTSGNKPKGPSKKY 349

Query: 772  LLTLPLDQRFKVLFSKGPQVHRFNFLKNLSPDDSNEEVLEVLQRYAYLIQGLWVSKTSLL 951
            LL+L L++R K L ++GP V RF+ LK+ +PD   EE +E LQ+YA L+QGLWV K+  L
Sbjct: 350  LLSLSLEERIKKLLTEGPPVQRFSALKHYAPDYETEEFIETLQQYAQLVQGLWVPKSLFL 409

Query: 952  QPK-GAEYPIRDYILLLFRKNTLISNKLINDSGLSKETMKQVLIALAIYRQTFRDWKFKE 1128
             P+ G+    RD++L LF KN ++S+  IN     ++ +K  L    + R  F+DWKFKE
Sbjct: 410  IPQDGSGRCARDFVLFLFSKNPVVSSSQINVPKSLRDRVKHFLNLFGVERPAFKDWKFKE 469

Query: 1129 PTDVSFLKSHPDIVRKQEHDWKDREK--KIMENLRPLRDGTAIRNSLNPSLTSRLGTSGN 1302
             TD  FL +H  I  KQE  W + EK    + +++ +    A      P +  +L    +
Sbjct: 470  KTDRLFLSNHVRIAEKQEELWNNVEKGFTFLRSIKSVHHANAATG--KPGVVPKLEKQVS 527

Query: 1303 VDQGAARGVTGTSSIDTITMTDATREALNKALVEVFRNHKVCSLQLINDCLRDQAVFKST 1482
             DQ   +      +     M+D TREAL KAL ++F+NHKVCS QLI   LRD AV +ST
Sbjct: 528  SDQTTTKSSNAPLNRKG-AMSDETREALPKALQKLFQNHKVCSFQLICQGLRDLAVSQST 586

Query: 1483 RPKXXXXXXXXXXXXXXXHLPELQSFITQIAINIHGVYVLKSS-DSPTLNPFRNVVINLF 1659
             PK                  EL+  I+Q+A  IHG+YVL SS + P  +P R VVI L 
Sbjct: 587  LPKADARMAVAAAYGVDAPPDELKKIISQVATEIHGLYVLTSSPEHPEYDPLRKVVIQLL 646

Query: 1660 CGKPPNXXXXXXXXXXXXXXXLNRDITNSEYTQVLTELCVS 1782
             G+ P                L R I ++EY++V+ E+C+S
Sbjct: 647  RGRGPKAVLKKADVLEASKHELGRAINSNEYSKVMNEICIS 687


>ref|XP_004164787.1| PREDICTED: LOW QUALITY PROTEIN: DNA-directed RNA polymerase III
            subunit RPC5-like [Cucumis sativus]
          Length = 702

 Score =  291 bits (744), Expect = 9e-76
 Identities = 163/401 (40%), Positives = 232/401 (57%), Gaps = 4/401 (0%)
 Frame = +1

Query: 592  WVSLEYYGIDSDFSSRYLQKMTPQESSPIQFSMSPYAYVNSICPGSSTENNRAKGPPRRY 771
            W+ L+YYG++SD S+R+LQ M  Q  SP+QFSMSP+ Y++S+CPG+ST  N+ KGP ++Y
Sbjct: 290  WIPLKYYGLESDLSTRHLQSMVSQTVSPMQFSMSPHDYMDSLCPGTSTSGNKPKGPSKKY 349

Query: 772  LLTLPLDQRFKVLFSKGPQVHRFNFLKNLSPDDSNEEVLEVLQRYAYLIQGLWVSKTSLL 951
            LL+L L++R K L ++GP V RF+ LK+ +PD   EE +E LQ+YA L+QGLWV K+  L
Sbjct: 350  LLSLSLEERIKKLLTEGPPVQRFSALKHYAPDYETEEFIETLQQYAQLVQGLWVPKSLFL 409

Query: 952  QPK-GAEYPIRDYILLLFRKNTLISNKLINDSGLSKETMKQVLIALAIYRQTFRDWKFKE 1128
             P+ G+    RD++L LF KN ++S+  IN     ++ +K  L    + R  F+DWKFKE
Sbjct: 410  IPQDGSGRCARDFVLFLFSKNPVVSSSQINVPKSLRDRVKHFLNLFGVERPAFKDWKFKE 469

Query: 1129 PTDVSFLKSHPDIVRKQEHDWKDREK--KIMENLRPLRDGTAIRNSLNPSLTSRLGTSGN 1302
             TD  FL +H  I  KQE  W + EK    + +++ +    A      P +  +L    +
Sbjct: 470  KTDRLFLSNHVRIAEKQEELWNNVEKGFTFLRSIKSVHHANAATG--KPGVVPKLEKQVS 527

Query: 1303 VDQGAARGVTGTSSIDTITMTDATREALNKALVEVFRNHKVCSLQLINDCLRDQAVFKST 1482
             DQ   +      +     M+D TREAL KAL ++F+NHKVCS QLI   LRD AV +ST
Sbjct: 528  SDQTTTKSSNAPLNRKG-AMSDETREALPKALQKLFQNHKVCSFQLICQGLRDLAVSQST 586

Query: 1483 RPKXXXXXXXXXXXXXXXHLPELQSFITQIAINIHGVYVLKSS-DSPTLNPFRNVVINLF 1659
             PK                  EL   I+Q+A  IHG+YVL SS + P  +P R VVI L 
Sbjct: 587  LPKADARMAVAAAYGVDAPPDELXKIISQVATEIHGLYVLTSSPEHPEYDPLRKVVIQLL 646

Query: 1660 CGKPPNXXXXXXXXXXXXXXXLNRDITNSEYTQVLTELCVS 1782
             G+ P                L R I ++EY++V+ E+C+S
Sbjct: 647  RGRGPKAVLKKADVLEASKHELGRAINSNEYSKVMNEICIS 687


>ref|XP_006425717.1| hypothetical protein CICLE_v10025048mg [Citrus clementina]
            gi|568824759|ref|XP_006466762.1| PREDICTED: DNA-directed
            RNA polymerase III subunit RPC5-like [Citrus sinensis]
            gi|557527707|gb|ESR38957.1| hypothetical protein
            CICLE_v10025048mg [Citrus clementina]
          Length = 690

 Score =  287 bits (734), Expect = 1e-74
 Identities = 160/408 (39%), Positives = 247/408 (60%), Gaps = 6/408 (1%)
 Frame = +1

Query: 592  WVSLEYYGIDSDFSSRYLQKMTPQESSPIQFSMSPYAYVNSICPGSSTENNRAKGPPRRY 771
            WV L+Y+G  SDFS+RYLQ+M  +E+SPI F+M+PY YV+S+CPG+ + N ++KGP RR+
Sbjct: 282  WVPLKYHGSKSDFSARYLQRMLVEENSPIHFTMNPYDYVSSLCPGAGSNNTKSKGPSRRF 341

Query: 772  LLTLPLDQRFKVLFSKGPQVHRFNFLKNLSPDDSNEEVLEVLQRYAYLIQGLWVSKTSLL 951
            LL++PL++RFK L  +G  V RF+ L + +P+D+ E+V+ VL +   L+QGLW  ++ LL
Sbjct: 342  LLSMPLEERFKKLLCEGEPVQRFSTLMHFAPNDTVEDVIGVLHKNGLLVQGLWAPRSPLL 401

Query: 952  -QPKGAEYPIRDYILLLFRKNTLISNKLINDSGLSKETMKQVLIALAIYRQTFRDWKFKE 1128
                  +   RDY+LL F KN+++  + ++ S   ++ +K  L   A+ R  F+DWKF++
Sbjct: 402  FNNDKMKCLARDYVLLSFSKNSVVKFQHLSVSPKLRDHIKCFLNIFAVERPDFKDWKFRQ 461

Query: 1129 PTDVSFLKSHPDIVRKQEHDWKDREKKIMENLRPL-RDGTAIRNSLNPS-LTSRLGTSGN 1302
             TD+SF+K HP+IV KQE  W   EK+I + +  L + G+ +RN    S + ++   + N
Sbjct: 462  QTDLSFIKEHPNIVIKQEQVWAAAEKQITDVINKLGKSGSTLRNDAGKSAMVNKHLKAIN 521

Query: 1303 VDQGAARGVTGTSSIDTITMTDATREALNKALVEVFRNHKVCSLQLINDCLRDQAVFKST 1482
               G +  +TG  +     +++ +REAL KAL ++F+ HKVCSL LI   LRD A+ +ST
Sbjct: 522  SSNGPSGALTGNKN-----LSNESREALPKALQKLFQIHKVCSLPLIKQGLRDLAISQST 576

Query: 1483 RPKXXXXXXXXXXXXXXXHLPELQSF---ITQIAINIHGVYVLKSSDSPTLNPFRNVVIN 1653
             PK                  + Q F   I+Q+A NIHG YV KSS+ P   P R VV +
Sbjct: 577  LPKADARMTVLAAEIVDSSFVDTQEFAEVISQVATNIHGFYVSKSSEDPQHGPLRKVVTD 636

Query: 1654 LFCGKPPNXXXXXXXXXXXXXXXLNRDITNSEYTQVLTELCVSVKGNA 1797
            L     P+               L R+I+N+EY++V++++C S KG+A
Sbjct: 637  LLLAGGPDAKLKKADVVEAARHVLKREISNAEYSKVMSDICES-KGSA 683


>ref|XP_007046991.1| SIN-like family protein, putative isoform 1 [Theobroma cacao]
            gi|508699252|gb|EOX91148.1| SIN-like family protein,
            putative isoform 1 [Theobroma cacao]
          Length = 700

 Score =  284 bits (727), Expect = 8e-74
 Identities = 168/399 (42%), Positives = 240/399 (60%), Gaps = 4/399 (1%)
 Frame = +1

Query: 592  WVSLEYYGIDSDFSSRYLQKMTPQESSPIQFSMSPYAYVNSICPGSSTENNRAKGPPRRY 771
            WV L+Y+   +DFS++YLQ+M  +ES  IQF+MSPY YV+S+CPG+S  NN+A+GP RR 
Sbjct: 293  WVPLKYHSSKNDFSAQYLQRMMAEESCRIQFTMSPYDYVDSLCPGASN-NNKAQGPSRRL 351

Query: 772  LLTLPLDQRFKVLFSKGPQVHRFNFLKNLSPDDSNEEVLEVLQRYAYLIQGLWVSKTSLL 951
            LL++PL++R K L S+GP  HRF+ LK+ +PD S E++ EVLQ++A L+QGLWV K+SLL
Sbjct: 352  LLSIPLEERLKKLLSEGPPFHRFSALKHFAPDASIEDIFEVLQKHALLVQGLWVPKSSLL 411

Query: 952  QPKGAEYPI-RDYILLLFRKNTLISNKLIND-SGLSKETMKQVLIALAIYRQTFRDWKFK 1125
             P+     + RDY+LLLF KN +IS   ++  S   KE +K  L  LAI R +F+DWK K
Sbjct: 412  FPEDPYKSLARDYVLLLFSKNPIISLAQVHALSPSRKEEVKGFLKILAIERPSFKDWKLK 471

Query: 1126 EPTDVSFLKSHPDIVRKQEHDWKDREKKIMENLRPLRDGTAIRNSLNPSLTSRLGTSGNV 1305
            E  D  F K +PDIV+ QE  W+  E  ++ ++   R      +   P    +   + N 
Sbjct: 472  ENADEGFKKLYPDIVKNQEQIWRAGEDNVINHI--CRGAKGGPSRTKPGTVIKPEKAMNS 529

Query: 1306 DQGAARGVTGTSSIDTITMTDATREALNKALVEVFRNHKVCSLQLINDCLRDQAVFKSTR 1485
            D+G  R      +    TM+D TREA+ KAL +VF+ HKVCSLQLI   LRD A+ +ST 
Sbjct: 530  DKGVRRVAPAVQA--GRTMSDETREAIPKALKKVFQTHKVCSLQLIRKGLRDLALSQSTL 587

Query: 1486 PKXXXXXXXXXXXXXXXHLPELQSFITQIAINIH-GVYVLKSS-DSPTLNPFRNVVINLF 1659
            PK                  ELQ  ++++A+ +H G++VL+SS + P  +P R VVINL 
Sbjct: 588  PKADARMVVKAAYGADAPEHELQEVVSEVAVELHGGLFVLRSSPEHPEYDPLREVVINLL 647

Query: 1660 CGKPPNXXXXXXXXXXXXXXXLNRDITNSEYTQVLTELC 1776
              K                  L R+I+N+EY +V+++ C
Sbjct: 648  RVK---GKLKKADVSAAALLSLKREISNNEYNKVMSDFC 683


>ref|XP_007046992.1| Transcription regulators,zinc ion binding, putative isoform 2
            [Theobroma cacao] gi|508699253|gb|EOX91149.1|
            Transcription regulators,zinc ion binding, putative
            isoform 2 [Theobroma cacao]
          Length = 588

 Score =  280 bits (715), Expect = 2e-72
 Identities = 167/401 (41%), Positives = 239/401 (59%), Gaps = 4/401 (0%)
 Frame = +1

Query: 592  WVSLEYYGIDSDFSSRYLQKMTPQESSPIQFSMSPYAYVNSICPGSSTENNRAKGPPRRY 771
            WV L+Y+   +DFS++YLQ+M  +ES  IQF+MSPY YV+S+CPG+S  NN+A+GP RR 
Sbjct: 196  WVPLKYHSSKNDFSAQYLQRMMAEESCRIQFTMSPYDYVDSLCPGASN-NNKAQGPSRRL 254

Query: 772  LLTLPLDQRFKVLFSKGPQVHRFNFLKNLSPDDSNEEVLEVLQRYAYLIQGLWVSKTSLL 951
            LL++PL++R K L S+GP  HRF+ LK+ +PD S E++ EVLQ++A L+QGLWV K+SLL
Sbjct: 255  LLSIPLEERLKKLLSEGPPFHRFSALKHFAPDASIEDIFEVLQKHALLVQGLWVPKSSLL 314

Query: 952  QPKGAEYPI-RDYILLLFRKNTLISNKLIND-SGLSKETMKQVLIALAIYRQTFRDWKFK 1125
             P+     + RDY+LLLF KN +IS   ++  S   KE +K  L  LAI R +F+DWK K
Sbjct: 315  FPEDPYKSLARDYVLLLFSKNPIISLAQVHALSPSRKEEVKGFLKILAIERPSFKDWKLK 374

Query: 1126 EPTDVSFLKSHPDIVRKQEHDWKDREKKIMENLRPLRDGTAIRNSLNPSLTSRLGTSGNV 1305
            E  D  F K +PDIV+ QE  W+  E  ++ ++   R      +   P    +   + N 
Sbjct: 375  ENADEGFKKLYPDIVKNQEQIWRAGEDNVINHI--CRGAKGGPSRTKPGTVIKPEKAMNS 432

Query: 1306 DQGAARGVTGTSSIDTITMTDATREALNKALVEVFRNHKVCSLQLINDCLRDQAVFKSTR 1485
            D+G  R      +    TM+D TREA+ KAL +VF+ HKVCSLQLI   LRD A+ +ST 
Sbjct: 433  DKGVRRVAPAVQA--GRTMSDETREAIPKALKKVFQTHKVCSLQLIRKGLRDLALSQSTL 490

Query: 1486 PKXXXXXXXXXXXXXXXHLPELQSFITQIAINIH-GVYVLKSS-DSPTLNPFRNVVINLF 1659
            PK                  ELQ  ++++A+ +H G++VL+SS + P  +P R VVINL 
Sbjct: 491  PKADARMVVKAAYGADAPEHELQEVVSEVAVELHGGLFVLRSSPEHPEYDPLREVVINLL 550

Query: 1660 CGKPPNXXXXXXXXXXXXXXXLNRDITNSEYTQVLTELCVS 1782
              K                  L R+I+N+EY + L  + ++
Sbjct: 551  RVK---GKLKKADVSAAALLSLKREISNNEYNKALRNMDIA 588


>ref|XP_002310208.2| hypothetical protein POPTR_0007s12540g [Populus trichocarpa]
            gi|550334731|gb|EEE90658.2| hypothetical protein
            POPTR_0007s12540g [Populus trichocarpa]
          Length = 667

 Score =  276 bits (707), Expect = 2e-71
 Identities = 172/415 (41%), Positives = 232/415 (55%), Gaps = 9/415 (2%)
 Frame = +1

Query: 580  VFQPWVSLEYYGIDSDFSSRYLQKMTPQESSPIQFSMSPYAYVNSICPGSSTENNRAKGP 759
            V + W+ L+Y+G  SD SSRYLQ M   ESS I+F+M+PY Y++S+CPG S  N +  GP
Sbjct: 271  VEESWIPLKYHGSKSDLSSRYLQNMVAPESSTIEFAMNPYDYMSSLCPGISNNNIKLNGP 330

Query: 760  PRRYLLTLPLDQRFKVLFSKGPQVHRFNFLKNLSPDDSNEEVLEVLQRYAYLIQGLWVSK 939
             RR LL+LPL++R K LF +GP +HRF  L++L P+DS E++L VLQ Y  L+QGLWV K
Sbjct: 331  SRRVLLSLPLEERIKRLFLEGPPIHRFAALRHLIPNDSIEDLLIVLQEYGQLVQGLWVPK 390

Query: 940  TSLLQP-----KGAEYPIRDYILLLFRKNTLISNKLINDSGLSKETMKQVLIALAIYRQT 1104
            TSLL P     +  +   RDYILLLF K+ +++   +N   +    +K  L   A+ R +
Sbjct: 391  TSLLFPNPKPTEKVKLAARDYILLLFSKSLVVTPSELN-VPMKPLILKSFLNIFAVERPS 449

Query: 1105 FRDWKFKEPTDVSFLKSHPDIVRKQEHDWKDREKKIMENLRPLRDGTAIRNSLNPSLTSR 1284
            F+DWKFKE  D  F++ +PDIVRKQE  W+   K I          +A  +    S++  
Sbjct: 450  FKDWKFKENVDTLFVELYPDIVRKQEQAWEVMGKNI----------SAAFDRAGKSVSKN 499

Query: 1285 LGTSGNVDQGAARGVTGTSSIDTITMTDATREALNKALVEVFRNHKVC--SLQLINDCLR 1458
            + T                     TMTD TREAL KAL +V + HKVC    Q+I   LR
Sbjct: 500  VITKPKK-----------------TMTDETREALRKALPKVLQTHKVCRYGFQMICQGLR 542

Query: 1459 DQAVFKSTRPKXXXXXXXXXXXXXXXHLPELQSFITQIAINIHGVYVLKSS-DSPTLNPF 1635
              A+ +ST PK                  ELQ  I+++A NIHG YVLKSS + P  +P 
Sbjct: 543  QLAISQSTLPKADPRIAVAAASGAEAPPEELQEVISEVATNIHGFYVLKSSPEHPDFDPL 602

Query: 1636 -RNVVINLFCGKPPNXXXXXXXXXXXXXXXLNRDITNSEYTQVLTELCVSVKGNA 1797
             R VVI LF  + PN               L R+ +NSEY +V+T+LC S KG+A
Sbjct: 603  SRKVVIGLFLARGPNANIKKSEVQAAARLELKREPSNSEYIKVMTDLCES-KGSA 656


>ref|XP_007201935.1| hypothetical protein PRUPE_ppa002228mg [Prunus persica]
            gi|462397466|gb|EMJ03134.1| hypothetical protein
            PRUPE_ppa002228mg [Prunus persica]
          Length = 698

 Score =  274 bits (701), Expect = 8e-71
 Identities = 172/418 (41%), Positives = 236/418 (56%), Gaps = 14/418 (3%)
 Frame = +1

Query: 586  QPWVSLEYYGIDSDFSSRYLQKMTPQESSPIQFSMSPYAYVNSICPGSSTENNRAKGPPR 765
            + WV L+Y+  +SDFS++YL++M  QESSPIQF+MSPY YVNS+CP         KG  R
Sbjct: 282  ESWVPLQYHSSESDFSAKYLRRMVGQESSPIQFTMSPYDYVNSLCP------RTCKGSSR 335

Query: 766  RYLLTLPLDQRFKVLFSKGPQVHRFNFLKN-LSPDDSNEEVLEVLQRYAYLI--QGLWVS 936
            R+LL+LPL++R K L  + P   RF+ LK   +PD + EE+L+VLQ++A L+   GLWV 
Sbjct: 336  RFLLSLPLEERIKKLLVEEPLARRFSDLKKYFAPDHTGEELLDVLQKHAQLLLDSGLWVP 395

Query: 937  KTSLLQPKG--------AEYPIRDYILLLFRKNTLISNKLINDSGLSKETMKQVLIALAI 1092
            KT LL P          A    R+Y+L LFRKNT+ISN  +N     K    + L  LA+
Sbjct: 396  KTLLLYPSKDMKDRDHVARQTARNYVLNLFRKNTVISNSQLNLPQNHKNHAYESLKILAV 455

Query: 1093 YRQTFRDWKFKEPTDVSFLKSHPDIVRKQEHDWKDREKKIMENLRPLRDGTAIRNSLNPS 1272
             R + +DWK KE +D SF + +PDI + QE +W+  E+K++   +   D    R   N  
Sbjct: 456  SRPSSQDWKLKEQSDKSFKELYPDIFKSQEQNWERMEEKLVNAFKAHTD----RGVKNAC 511

Query: 1273 LTSRLGTSGNVDQGAARGVTGTSSIDTITMTDATREALNKALVEVFRNHKVCSLQLINDC 1452
            +TS+ G S N D+G  +  +    I   TM+D TR AL +A+ EV   HKVC+ +LI + 
Sbjct: 512  MTSKPGKSLNSDKGTTKSASDV-QIGGRTMSDETRAALPEAIKEVLHEHKVCNFRLICEG 570

Query: 1453 LRDQAVFKSTRPKXXXXXXXXXXXXXXXHLP--ELQSFITQIAINIHGVYVLKSS-DSPT 1623
            LR  AV KS+ PK                 P  ELQ  I Q+A +IHG+YVLKSS +   
Sbjct: 571  LRRLAVRKSSLPKVDPKTKRVIDAAYGVDAPQHELQKVICQVAADIHGLYVLKSSPEHSE 630

Query: 1624 LNPFRNVVINLFCGKPPNXXXXXXXXXXXXXXXLNRDITNSEYTQVLTELCVSVKGNA 1797
             +  R VVI+L C K PN               L RDI  +EY +V+ + CV  KG+A
Sbjct: 631  HDRLRKVVIDLLCTKGPNAKLKRGEVFEAAKIALERDINTNEYNKVMNDFCV-FKGSA 687


>gb|EXB77882.1| DNA-directed RNA polymerase III subunit RPC5 [Morus notabilis]
          Length = 732

 Score =  272 bits (695), Expect = 4e-70
 Identities = 164/396 (41%), Positives = 230/396 (58%), Gaps = 7/396 (1%)
 Frame = +1

Query: 592  WVSLEYYGIDSDFSSRYLQKMTPQESSPIQFSMSPYAYVNSICPGSSTENNRAKGPPRRY 771
            WV L+Y+G +S+ S RYL+KM  QESSP+QF+MSPY Y+NS+CPGS    N  KGP RR 
Sbjct: 282  WVPLKYHGSESESSVRYLRKMAVQESSPLQFTMSPYDYLNSLCPGSCKNGNEPKGPSRRA 341

Query: 772  LLTLPLDQRFKVLFSKG-PQVHRFNFLKNLSPDDSNEEVLEVLQRYAYLIQGLWVSKTSL 948
            LL+LPL++R K L  +G   VHRF+ LK+ +PD + +E+L+ LQ +A L+QGLW  K+SL
Sbjct: 342  LLSLPLEERIKSLLCEGLAPVHRFSVLKHFAPDCTTKEILDALQNHALLVQGLWAPKSSL 401

Query: 949  L----QPKGAEYPIRDYILLLFRKNTLISNKLINDSGLSKETMKQVLIALAIYRQTFRDW 1116
            L    +  GA+   RDY+LLLF KN + S   ++     K  + + L  L + R + +DW
Sbjct: 402  LLGTSKETGAQRIARDYVLLLFWKNPVFSFSSLHFPSSLKTAVNKFLNILGVERPSVKDW 461

Query: 1117 KFKEPTDVSFLKSHPDIVRKQEHDWKDREKKIMENLRPLRDGTAIRNSLNPSLTSRLGTS 1296
            KFK  TD+SF+K++PD+V+KQE  W D E+ IM       DG + R   N S+ SR    
Sbjct: 462  KFKGQTDISFIKNYPDVVKKQEEVWGDLERDIM---NMFGDGKSGRGPKNTSIPSRPVKP 518

Query: 1297 GNVDQGAARGVTGTSSIDTITMTDATREAL-NKALVEVFRNHKVCSLQLINDCLRDQAVF 1473
             N ++G  +G   +  +    + D  RE L +K L +V + HKVCSLQL+   LR+ A+ 
Sbjct: 519  LNSNKGVPKGT--SEVVGGKKIPDDIREVLCSKILPKVIQEHKVCSLQLMCQGLRELALN 576

Query: 1474 KSTRPKXXXXXXXXXXXXXXXHLPELQSFITQIAINIHGVYVLKSS-DSPTLNPFRNVVI 1650
            K   PK                  EL   + + AINIHG+YVLKSS + P  +PFRNVVI
Sbjct: 577  KLNLPKADDRFARAAACGTASP-GELVKLLDETAINIHGLYVLKSSAEHPQYDPFRNVVI 635

Query: 1651 NLFCGKPPNXXXXXXXXXXXXXXXLNRDITNSEYTQ 1758
            +L                      L RD+T++EY++
Sbjct: 636  DLLRQNGLAAKLKKAEIFDAAKNALKRDVTSNEYSK 671


>gb|AEI98616.1| hypothetical protein 111O18.3 [Coffea canephora]
          Length = 643

 Score =  267 bits (683), Expect = 1e-68
 Identities = 149/344 (43%), Positives = 216/344 (62%), Gaps = 2/344 (0%)
 Frame = +1

Query: 586  QPWVSLEYYGIDSDFSSRYLQKMTPQESSPIQFSMSPYAYVNSICPGSSTENNRAKGPPR 765
            + W+ L Y+G  SD S  Y++KM   +SS IQFSM+ + YVN++CPG+S ENN + GP R
Sbjct: 273  EDWIPLNYHGARSDISMSYVRKMVEHDSSHIQFSMN-HDYVNTLCPGTSNENNGSNGPSR 331

Query: 766  RYLLTLPLDQRFKVLFSKGPQVHRFNFLKNLSPDDSNEEVLEVLQRYAYLIQGLWVSKTS 945
              LL+LPL++RF+    +GP +HRF+ LK+L+PD S E++L VL ++A L+QGLW+ K+S
Sbjct: 332  -VLLSLPLEERFRTWLLQGPPIHRFDALKHLAPDASVEDILAVLSQHAQLVQGLWIPKSS 390

Query: 946  LLQPK--GAEYPIRDYILLLFRKNTLISNKLINDSGLSKETMKQVLIALAIYRQTFRDWK 1119
            LL  K  G +   RDY+LLLF +  +I+N  +         M+ VL  +A  R +  DWK
Sbjct: 391  LLYGKDQGIDALARDYVLLLFSRTPIINNSQLPQQQKLNRAMRDVLDTVAFERVSLNDWK 450

Query: 1120 FKEPTDVSFLKSHPDIVRKQEHDWKDREKKIMENLRPLRDGTAIRNSLNPSLTSRLGTSG 1299
            FKEP D++F+K +P IVR+QE  W+  EK I E +   ++  A +NS  P  T+   TS 
Sbjct: 451  FKEPPDMTFIKLNPKIVREQEQTWERLEKLITEKIFGDKNRPATKNSSRPLTTNNPATSK 510

Query: 1300 NVDQGAARGVTGTSSIDTITMTDATREALNKALVEVFRNHKVCSLQLINDCLRDQAVFKS 1479
            ++ + A+  +   + +    M++ TREAL KAL ++F++HKVC  Q I   LR+ AV +S
Sbjct: 511  SLSKHASNSL--NAGVPRRPMSEETREALPKALQKLFQSHKVC-FQQICQRLREMAVSES 567

Query: 1480 TRPKXXXXXXXXXXXXXXXHLPELQSFITQIAINIHGVYVLKSS 1611
            +RPK                  ELQ+ I+Q+AINIHGVYVLKSS
Sbjct: 568  SRPKGFAREAIAAAHGVEAPPEELQAIISQVAINIHGVYVLKSS 611


>ref|XP_007046993.1| Transcription regulators,zinc ion binding, putative isoform 3
            [Theobroma cacao] gi|508699254|gb|EOX91150.1|
            Transcription regulators,zinc ion binding, putative
            isoform 3 [Theobroma cacao]
          Length = 736

 Score =  266 bits (681), Expect = 2e-68
 Identities = 154/353 (43%), Positives = 219/353 (62%), Gaps = 4/353 (1%)
 Frame = +1

Query: 592  WVSLEYYGIDSDFSSRYLQKMTPQESSPIQFSMSPYAYVNSICPGSSTENNRAKGPPRRY 771
            WV L+Y+   +DFS++YLQ+M  +ES  IQF+MSPY YV+S+CPG+S  NN+A+GP RR 
Sbjct: 293  WVPLKYHSSKNDFSAQYLQRMMAEESCRIQFTMSPYDYVDSLCPGASN-NNKAQGPSRRL 351

Query: 772  LLTLPLDQRFKVLFSKGPQVHRFNFLKNLSPDDSNEEVLEVLQRYAYLIQGLWVSKTSLL 951
            LL++PL++R K L S+GP  HRF+ LK+ +PD S E++ EVLQ++A L+QGLWV K+SLL
Sbjct: 352  LLSIPLEERLKKLLSEGPPFHRFSALKHFAPDASIEDIFEVLQKHALLVQGLWVPKSSLL 411

Query: 952  QPKGAEYPI-RDYILLLFRKNTLISNKLIND-SGLSKETMKQVLIALAIYRQTFRDWKFK 1125
             P+     + RDY+LLLF KN +IS   ++  S   KE +K  L  LAI R +F+DWK K
Sbjct: 412  FPEDPYKSLARDYVLLLFSKNPIISLAQVHALSPSRKEEVKGFLKILAIERPSFKDWKLK 471

Query: 1126 EPTDVSFLKSHPDIVRKQEHDWKDREKKIMENLRPLRDGTAIRNSLNPSLTSRLGTSGNV 1305
            E  D  F K +PDIV+ QE  W+  E  ++ ++   R      +   P    +   + N 
Sbjct: 472  ENADEGFKKLYPDIVKNQEQIWRAGEDNVINHI--CRGAKGGPSRTKPGTVIKPEKAMNS 529

Query: 1306 DQGAARGVTGTSSIDTITMTDATREALNKALVEVFRNHKVCSLQLINDCLRDQAVFKSTR 1485
            D+G  R      +    TM+D TREA+ KAL +VF+ HKVCSLQLI   LRD A+ +ST 
Sbjct: 530  DKGVRRVAPAVQA--GRTMSDETREAIPKALKKVFQTHKVCSLQLIRKGLRDLALSQSTL 587

Query: 1486 PKXXXXXXXXXXXXXXXHLPELQSFITQIAINIH-GVYVLKSS-DSPTLNPFR 1638
            PK                  ELQ  ++++A+ +H G++VL+SS + P  +P R
Sbjct: 588  PKADARMVVKAAYGADAPEHELQEVVSEVAVELHGGLFVLRSSPEHPEYDPLR 640


>ref|XP_006395054.1| hypothetical protein EUTSA_v10003751mg [Eutrema salsugineum]
            gi|557091693|gb|ESQ32340.1| hypothetical protein
            EUTSA_v10003751mg [Eutrema salsugineum]
          Length = 682

 Score =  265 bits (678), Expect = 4e-68
 Identities = 152/408 (37%), Positives = 224/408 (54%), Gaps = 11/408 (2%)
 Frame = +1

Query: 592  WVSLEYYGIDSDFSSRYLQKMTPQESSPIQFSMSPYAYVNSICPGSSTENNRAKGPPRRY 771
            WV+L+Y+G+ S+F SRYL  M    +S I F+MSP  Y+NS+C G S+ N+ ++   +R 
Sbjct: 270  WVALKYHGLQSEFCSRYLNGMMANGNSSIDFNMSPDVYINSLCRGESSRNSESRDSSKRV 329

Query: 772  LLTLPLDQRFKVLFSKGPQVHRFNFLKNLSPDDSNEEVLEVLQRYAYLIQGLWVSKTSLL 951
            L +LPL++R + L  +GP + R++ LK+ +P+ S+ + L+VLQ YA+L+QGLW  KT LL
Sbjct: 330  LTSLPLEERVQKLLCQGPPLFRYSVLKHYAPEFSDNDFLKVLQDYAWLVQGLWTPKTRLL 389

Query: 952  QPKGAEYPIRDYILLLFRKNTLISNKLINDSGLSKETMKQVLIALAIYRQTFRDWKFKEP 1131
            Q  G +   RDY+L+LF K + I+   +  +G  KE +  +L   A  R    DWKFKEP
Sbjct: 390  QLDGPQEASRDYVLMLFSKGSTITYSEVAATGRLKEKITSMLTKFAKERPLLCDWKFKEP 449

Query: 1132 TDVSFLKSHPDIVRKQEHDWKDREKKIMENLRP--------LRDGTAIRNS--LNPSLTS 1281
             DVSF+KS+ +I  KQE  WK  ++K+   +          LR+G     S  + P + +
Sbjct: 450  ADVSFIKSYKEIANKQEIFWKALDEKLTPKITQGGKSRADNLRNGVGKNPSGTVKPEIPT 509

Query: 1282 RLGTSGNVDQGAARGVTGTSSIDTITMTDATREALNKALVEVFRNHKVCSLQLINDCLRD 1461
             L   G   + A     G        M++  R A+ KAL +VF++HKVCS + I   LRD
Sbjct: 510  TLSDKGGSSRNAIHRFVGQK------MSEDIRRAILKALKKVFQSHKVCSYETICQRLRD 563

Query: 1462 QAVFKSTRPKXXXXXXXXXXXXXXXHLPELQSFITQIAINIHGVYVLK-SSDSPTLNPFR 1638
             AV  S  PK               H  ELQ  I+++ ++IHG +V K S D P  +P R
Sbjct: 564  LAVSTSNNPKADSGMAQQVALAVDAHKEELQQIISEVTVDIHGSFVYKLSPDHPEHDPLR 623

Query: 1639 NVVINLFCGKPPNXXXXXXXXXXXXXXXLNRDITNSEYTQVLTELCVS 1782
            +VVI+L  G  P                L R IT++EY +V+ +LC S
Sbjct: 624  SVVIDLLLGNSPGAKLMRADVFVAGETVLRRKITSNEYQKVMHDLCES 671


>ref|XP_006425716.1| hypothetical protein CICLE_v10025048mg [Citrus clementina]
            gi|557527706|gb|ESR38956.1| hypothetical protein
            CICLE_v10025048mg [Citrus clementina]
          Length = 637

 Score =  264 bits (674), Expect = 1e-67
 Identities = 147/364 (40%), Positives = 223/364 (61%), Gaps = 6/364 (1%)
 Frame = +1

Query: 592  WVSLEYYGIDSDFSSRYLQKMTPQESSPIQFSMSPYAYVNSICPGSSTENNRAKGPPRRY 771
            WV L+Y+G  SDFS+RYLQ+M  +E+SPI F+M+PY YV+S+CPG+ + N ++KGP RR+
Sbjct: 282  WVPLKYHGSKSDFSARYLQRMLVEENSPIHFTMNPYDYVSSLCPGAGSNNTKSKGPSRRF 341

Query: 772  LLTLPLDQRFKVLFSKGPQVHRFNFLKNLSPDDSNEEVLEVLQRYAYLIQGLWVSKTSLL 951
            LL++PL++RFK L  +G  V RF+ L + +P+D+ E+V+ VL +   L+QGLW  ++ LL
Sbjct: 342  LLSMPLEERFKKLLCEGEPVQRFSTLMHFAPNDTVEDVIGVLHKNGLLVQGLWAPRSPLL 401

Query: 952  -QPKGAEYPIRDYILLLFRKNTLISNKLINDSGLSKETMKQVLIALAIYRQTFRDWKFKE 1128
                  +   RDY+LL F KN+++  + ++ S   ++ +K  L   A+ R  F+DWKF++
Sbjct: 402  FNNDKMKCLARDYVLLSFSKNSVVKFQHLSVSPKLRDHIKCFLNIFAVERPDFKDWKFRQ 461

Query: 1129 PTDVSFLKSHPDIVRKQEHDWKDREKKIMENLRPL-RDGTAIRNSLNPS-LTSRLGTSGN 1302
             TD+SF+K HP+IV KQE  W   EK+I + +  L + G+ +RN    S + ++   + N
Sbjct: 462  QTDLSFIKEHPNIVIKQEQVWAAAEKQITDVINKLGKSGSTLRNDAGKSAMVNKHLKAIN 521

Query: 1303 VDQGAARGVTGTSSIDTITMTDATREALNKALVEVFRNHKVCSLQLINDCLRDQAVFKST 1482
               G +  +TG  +     +++ +REAL KAL ++F+ HKVCSL LI   LRD A+ +ST
Sbjct: 522  SSNGPSGALTGNKN-----LSNESREALPKALQKLFQIHKVCSLPLIKQGLRDLAISQST 576

Query: 1483 RPKXXXXXXXXXXXXXXXHLPELQSF---ITQIAINIHGVYVLKSSDSPTLNPFRNVVIN 1653
             PK                  + Q F   I+Q+A NIHG YV KSS+ P   P R   +N
Sbjct: 577  LPKADARMTVLAAEIVDSSFVDTQEFAEVISQVATNIHGFYVSKSSEDPQHGPLR---LN 633

Query: 1654 LFCG 1665
            L  G
Sbjct: 634  LLIG 637


>ref|XP_002863995.1| hypothetical protein ARALYDRAFT_495012 [Arabidopsis lyrata subsp.
            lyrata] gi|297309830|gb|EFH40254.1| hypothetical protein
            ARALYDRAFT_495012 [Arabidopsis lyrata subsp. lyrata]
          Length = 676

 Score =  258 bits (659), Expect = 6e-66
 Identities = 153/411 (37%), Positives = 220/411 (53%), Gaps = 14/411 (3%)
 Frame = +1

Query: 586  QPWVSLEYYGIDSDFSSRYLQKMTPQESSPIQFSMSPYAYVNSICPGSSTENNRAKGPPR 765
            + WV+L+Y+G+ S++ S YL  M    +S + F+MSP  Y+N +C G S+ N+  K   +
Sbjct: 260  ETWVALKYHGLQSEYCSTYLNGMMANGNSSLDFNMSPDVYINELCRGGSSRNSELKETSK 319

Query: 766  RYLLTLPLDQRFKVLFSKGPQVHRFNFLKNLSPDDSNEEVLEVLQRYAYLIQGLWVSKTS 945
            R LL+LPL++R K L  +G  + R+N LK+ +P+ S+E+ L  LQ   +L+QGLW  KT 
Sbjct: 320  RVLLSLPLEERVKKLLCEGSPLLRYNVLKHYAPEFSDEDFLGALQEDGWLVQGLWTPKTK 379

Query: 946  LLQPKGAEYPIRDYILLLFRKNTLISNKLINDSGLSKE---TMKQVLIALAIYRQTFRDW 1116
            LL        IR+Y+L LF +NT I    +  +G  +E    MK +L   A  R    DW
Sbjct: 380  LLGLDENCRSIREYVLSLFSQNTTIKYSEVEATGFQREKMIIMKSMLTEFAKERPLLNDW 439

Query: 1117 KFKEPTDVSFLKSHPDIVRKQEHDWKDREKKIMENLRPLRDGTAIRN----------SLN 1266
            KFKEPTDVSF+KS+P+IV++Q+  W +R KKI+E++   R   A             ++ 
Sbjct: 440  KFKEPTDVSFIKSYPEIVKEQDILWTNR-KKIIESILTTRKSRADNRRNVVGKNSSVTVK 498

Query: 1267 PSLTSRLGTSGNVDQGAARGVTGTSSIDTITMTDATREALNKALVEVFRNHKVCSLQLIN 1446
            P + + L   G   +     V G        M +  R AL KAL +VF+ HKVC  + I 
Sbjct: 499  PEVPTTLSDKGGSSRNTIPRVVGQK------MPEELRWALPKALKKVFQTHKVCRYETIC 552

Query: 1447 DCLRDQAVFKSTRPKXXXXXXXXXXXXXXXHLPELQSFITQIAINIHGVYV-LKSSDSPT 1623
              LRD AV  S  PK               +  EL+  I+++A NIHG YV + S D P 
Sbjct: 553  QGLRDLAVSTSNNPKADSGMAVNVALAVDAYQDELKDVISEVAANIHGSYVSISSPDHPE 612

Query: 1624 LNPFRNVVINLFCGKPPNXXXXXXXXXXXXXXXLNRDITNSEYTQVLTELC 1776
             +  R VVI+LFCG  P                LNR+ITN+EY +V+ +LC
Sbjct: 613  YDSLRGVVISLFCGTGPGAKLMKAEVFAAGRNELNREITNNEYIKVMHDLC 663


>ref|XP_004300617.1| PREDICTED: DNA-directed RNA polymerase III subunit RPC5-like
            [Fragaria vesca subsp. vesca]
          Length = 685

 Score =  256 bits (655), Expect = 2e-65
 Identities = 162/413 (39%), Positives = 232/413 (56%), Gaps = 14/413 (3%)
 Frame = +1

Query: 586  QPWVSLEYYGIDSDFSSRYLQKMTPQESSPIQFSMSPYAYVNSICPGSSTENNRAKGPPR 765
            + WV L+Y+G +SDFS+ YL++M  Q+SSP++F+M+PY YVNS+CP +       KG  +
Sbjct: 271  ESWVPLQYHGSESDFSAGYLKRMVVQDSSPLEFTMTPYDYVNSLCPRT------CKGSSK 324

Query: 766  RYLLTLPLDQRFKVLFSKGPQVHRFNFLKNL-SPDDSNEEVLEVLQRYAYLIQGLWVSKT 942
            R LL LPL++R + L  + P   RF+ LK   +P +  +E+L+VLQ+   L++GLWV KT
Sbjct: 325  RALLNLPLEERIQKLLVEEPIARRFSDLKKYYAPRNQEKELLDVLQKNGLLLRGLWVPKT 384

Query: 943  SLLQPK--GAEYP--------IRDYILLLFRKNTLISNKLINDSGLSKETMKQVLIALAI 1092
            +LL PK  G+            R++IL  F+KN +IS   +N     K    + L  LA+
Sbjct: 385  ALLYPKKEGSSRKKDDDNLRTARNHILNSFQKNPVISYSELNVYPPLKPHFDETLKFLAV 444

Query: 1093 YRQTFRDWKFKEPTDVSFLKSHPDIVRKQEHDWKDREKKIMENLRPLRDGTAIRNSLNPS 1272
            YR + RDWK KE +DVSF + HPDI   QE  W+  +K+++E L+P RD        N S
Sbjct: 445  YRPSTRDWKLKEQSDVSFAELHPDISESQEQIWERMDKQLVEALKPHRD------LKNAS 498

Query: 1273 LTSRLGTSGNVDQGAARGVTGTSSIDTITMTDATREALNKALVEVFRNHKVCSLQLINDC 1452
            ++S+ G   N D+G  +  +G  S    TM+D T   L +A+ EVF+  KVCS QLI D 
Sbjct: 499  MSSKTGKLPNSDKGPNKSASGAPSGGVRTMSDETLAVLPQAIKEVFKTRKVCSFQLICDT 558

Query: 1453 LRDQAVFKSTRPKXXXXXXXXXXXXXXXHLP--ELQSFITQIAINIHGVYVLK-SSDSPT 1623
            L +  + +S   K                 P  EL++ ITQ A+ I GVYVLK SS+ P 
Sbjct: 559  LGNMTLERSQHAKVDPNSRKLTAVRNGLAAPPEELKNVITQFAVEIGGVYVLKSSSEHPE 618

Query: 1624 LNPFRNVVINLFCGKPPNXXXXXXXXXXXXXXXLNRDITNSEYTQVLTELCVS 1782
             +  R+VVI L  GK                  L R+I+N+EY +V+ ELCVS
Sbjct: 619  HDQLRDVVIKLLQGK-NKGPIKKLDVTVAAQEELGREISNNEYNKVMNELCVS 670


>ref|XP_006355442.1| PREDICTED: DNA-directed RNA polymerase III subunit RPC5-like isoform
            X2 [Solanum tuberosum]
          Length = 657

 Score =  256 bits (654), Expect = 2e-65
 Identities = 160/405 (39%), Positives = 223/405 (55%), Gaps = 4/405 (0%)
 Frame = +1

Query: 586  QPWVSLEYYGIDSDFSSRYLQKMTPQESSPIQFSMSPYAYVNSICPGSSTENNRAKGPPR 765
            Q W+ L+Y+G  SD S+RYLQKM  +E SP+ FSMSP  Y+N+  PG  T+ +R K   R
Sbjct: 249  QHWLHLKYHGARSDISARYLQKMAMEEGSPVPFSMSPVDYLNAFFPGRPTDTDRLK-ILR 307

Query: 766  RYLLTLPLDQRFKVLFSKGPQVHRFNFLKNLSPDDSNEEVLEVLQRYAYLIQGLWVSKTS 945
              L  LPL++R +    +GP +HRF+ LK+L+PD+S +E++ VLQ YA L+QGLWV K+S
Sbjct: 308  TRLSQLPLEERVRTWLLEGPPIHRFDALKHLAPDNSADEIIRVLQIYAQLVQGLWVPKSS 367

Query: 946  LL--QPKGAEYPIRDYILLLFRKNTLISNKLINDSGLSKETMKQVLIALAIYRQTFRDWK 1119
            L+     G E   R+++L  F K  LI   +        +     L +LA+ R    DWK
Sbjct: 368  LVYGTNSGVEVLARNFVLYEFTKGILIKKSVFGRRPEFLKAATPALKSLAVERPDLNDWK 427

Query: 1120 FKEPTDVSFLKSHPDIVRKQEHDWKDREKKIMENLRPLRDGTAIRNSLNPSLTSRLGTSG 1299
             KE  D  F   + D+VR+++  W+   K+I + L   R+   ++N LNP+       SG
Sbjct: 428  LKEHPDKKFENLYGDVVREKQATWECLGKQINDVLPGGRNRPTMKNPLNPNADIPALPSG 487

Query: 1300 NVDQGAARGVTGTSSIDTITMTDATREALNKALVEVFRNHKVCSLQLINDCLRDQAVFKS 1479
            +           +SS+   +M++  REAL KAL EVFR +KVCS Q I   LR   V KS
Sbjct: 488  DKPT--------SSSLLRTSMSEEIREALPKALQEVFRTYKVCSFQQIRQGLRKLGVSKS 539

Query: 1480 TRPK-XXXXXXXXXXXXXXXHLPELQSFITQIAINIHGVYVLKSS-DSPTLNPFRNVVIN 1653
              PK                   E+Q+ I Q+A+NIHGVYVLKSS D+P  +  R VVI+
Sbjct: 540  YPPKGAPRKAITASIDVFDAPQEEIQAVINQVAVNIHGVYVLKSSPDNPQYDTLRKVVID 599

Query: 1654 LFCGKPPNXXXXXXXXXXXXXXXLNRDITNSEYTQVLTELCVSVK 1788
            LF  + P+               LNRDITN E+ +V+ ELC S K
Sbjct: 600  LFMAEGPSAKLKKASVTEAAKLQLNRDITNVEFLKVMKELCHSEK 644


>ref|NP_199764.1| SIN-like protein [Arabidopsis thaliana] gi|10177619|dbj|BAB10766.1|
            unnamed protein product [Arabidopsis thaliana]
            gi|332008443|gb|AED95826.1| SIN-like protein [Arabidopsis
            thaliana]
          Length = 689

 Score =  255 bits (651), Expect = 5e-65
 Identities = 149/410 (36%), Positives = 218/410 (53%), Gaps = 13/410 (3%)
 Frame = +1

Query: 586  QPWVSLEYYGIDSDFSSRYLQKMTPQESSPIQFSMSPYAYVNSICPGSSTENNRAKGPPR 765
            + WVSL+Y+G+ S++ SRYL  M    +S I F+MSP  Y+N +C G S+ N+ +K   +
Sbjct: 273  ETWVSLKYHGLQSEYCSRYLNGMMANGNSSIDFNMSPGTYINELCRGGSSRNSESKETLK 332

Query: 766  RYLLTLPLDQRFKVLFSKGPQVHRFNFLKNLSPDDSNEEVLEVLQRYAYLIQGLWVSKTS 945
            R LL+LPL +R + L  +G  + R++ LK+ +P+ S+E+ L  LQ Y  L+QGLW  KT 
Sbjct: 333  RVLLSLPLKERVQKLLCEGSPLIRYSVLKHYAPEFSDEDFLGALQEYGRLVQGLWTPKTR 392

Query: 946  LLQPKGAEYPIRDYILLLFRKNTLISNKLINDSG-LSKETMKQVLIALAIYRQTFRDWKF 1122
            LL+  G     RDY+L LF +NT I    +  +G   K  M+++L   A  R   +DWKF
Sbjct: 393  LLKLDGPVEAARDYVLSLFSQNTTIKYSEVEATGDKMKPLMERMLTEFAKERHVLKDWKF 452

Query: 1123 KEPTDVSFLKSHPDIVRKQEHDWKDREKKIMENL-----------RPLRDGTAIRNSLNP 1269
            KEPTDVSF+KS+P+IV++Q+  W D+ + +   +           R    GT+   ++ P
Sbjct: 453  KEPTDVSFIKSYPEIVKEQDIFWTDKRENLKSRITAQGGKSRADKRRNVVGTSSSVTVKP 512

Query: 1270 SLTSRLGTSGNVDQGAARGVTGTSSIDTITMTDATREALNKALVEVFRNHKVCSLQLIND 1449
             + + L   G   +     V       T  M +  ++AL KAL +VF+ HKVC  + I  
Sbjct: 513  EVPTTLSDKGGSSKNTIHRVV------TQEMPEELKKALPKALKKVFQTHKVCRYETICQ 566

Query: 1450 CLRDQAVFKSTRPKXXXXXXXXXXXXXXXHLPELQSFITQIAINIHGVYV-LKSSDSPTL 1626
             LRD AV  S  PK               +  EL+  I  +A NIHG YV + S D P  
Sbjct: 567  GLRDLAVSTSNNPKADSGMAVNVALAVDAYQGELEDVINGVATNIHGSYVSISSPDHPEY 626

Query: 1627 NPFRNVVINLFCGKPPNXXXXXXXXXXXXXXXLNRDITNSEYTQVLTELC 1776
            +  R VVI+L  G PP                L R+ITN+EY +V+ E+C
Sbjct: 627  DSLREVVISLLTGSPPGTKLMKAEVFAAGRTKLEREITNNEYIKVMHEIC 676


>ref|XP_006355441.1| PREDICTED: DNA-directed RNA polymerase III subunit RPC5-like isoform
            X1 [Solanum tuberosum]
          Length = 669

 Score =  255 bits (651), Expect = 5e-65
 Identities = 159/403 (39%), Positives = 222/403 (55%), Gaps = 4/403 (0%)
 Frame = +1

Query: 592  WVSLEYYGIDSDFSSRYLQKMTPQESSPIQFSMSPYAYVNSICPGSSTENNRAKGPPRRY 771
            W+ L+Y+G  SD S+RYLQKM  +E SP+ FSMSP  Y+N+  PG  T+ +R K   R  
Sbjct: 263  WLHLKYHGARSDISARYLQKMAMEEGSPVPFSMSPVDYLNAFFPGRPTDTDRLK-ILRTR 321

Query: 772  LLTLPLDQRFKVLFSKGPQVHRFNFLKNLSPDDSNEEVLEVLQRYAYLIQGLWVSKTSLL 951
            L  LPL++R +    +GP +HRF+ LK+L+PD+S +E++ VLQ YA L+QGLWV K+SL+
Sbjct: 322  LSQLPLEERVRTWLLEGPPIHRFDALKHLAPDNSADEIIRVLQIYAQLVQGLWVPKSSLV 381

Query: 952  --QPKGAEYPIRDYILLLFRKNTLISNKLINDSGLSKETMKQVLIALAIYRQTFRDWKFK 1125
                 G E   R+++L  F K  LI   +        +     L +LA+ R    DWK K
Sbjct: 382  YGTNSGVEVLARNFVLYEFTKGILIKKSVFGRRPEFLKAATPALKSLAVERPDLNDWKLK 441

Query: 1126 EPTDVSFLKSHPDIVRKQEHDWKDREKKIMENLRPLRDGTAIRNSLNPSLTSRLGTSGNV 1305
            E  D  F   + D+VR+++  W+   K+I + L   R+   ++N LNP+       SG+ 
Sbjct: 442  EHPDKKFENLYGDVVREKQATWECLGKQINDVLPGGRNRPTMKNPLNPNADIPALPSGDK 501

Query: 1306 DQGAARGVTGTSSIDTITMTDATREALNKALVEVFRNHKVCSLQLINDCLRDQAVFKSTR 1485
                      +SS+   +M++  REAL KAL EVFR +KVCS Q I   LR   V KS  
Sbjct: 502  PT--------SSSLLRTSMSEEIREALPKALQEVFRTYKVCSFQQIRQGLRKLGVSKSYP 553

Query: 1486 PK-XXXXXXXXXXXXXXXHLPELQSFITQIAINIHGVYVLKSS-DSPTLNPFRNVVINLF 1659
            PK                   E+Q+ I Q+A+NIHGVYVLKSS D+P  +  R VVI+LF
Sbjct: 554  PKGAPRKAITASIDVFDAPQEEIQAVINQVAVNIHGVYVLKSSPDNPQYDTLRKVVIDLF 613

Query: 1660 CGKPPNXXXXXXXXXXXXXXXLNRDITNSEYTQVLTELCVSVK 1788
              + P+               LNRDITN E+ +V+ ELC S K
Sbjct: 614  MAEGPSAKLKKASVTEAAKLQLNRDITNVEFLKVMKELCHSEK 656