BLASTX nr result
ID: Akebia27_contig00007613
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Akebia27_contig00007613
(744 letters)
Database: ./nr
38,876,450 sequences; 13,856,398,315 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_007044902.1| RNA-binding family protein isoform 1 [Theobr... 283 6e-74
ref|XP_006438179.1| hypothetical protein CICLE_v10030915mg [Citr... 282 1e-73
ref|XP_006483997.1| PREDICTED: cleavage and polyadenylation spec... 279 8e-73
ref|XP_007044909.1| RNA-binding family protein isoform 6 [Theobr... 276 5e-72
ref|XP_007044908.1| RNA-binding family protein isoform 5, partia... 276 5e-72
ref|XP_007044907.1| RNA-binding family protein isoform 4 [Theobr... 276 5e-72
ref|XP_007044904.1| RNA-binding family protein isoform 1 [Theobr... 276 5e-72
ref|XP_006483998.1| PREDICTED: cleavage and polyadenylation spec... 275 1e-71
ref|XP_006438180.1| hypothetical protein CICLE_v10030917mg [Citr... 275 1e-71
ref|XP_007225677.1| hypothetical protein PRUPE_ppa002814mg [Prun... 271 2e-70
ref|XP_002282072.2| PREDICTED: uncharacterized protein LOC100268... 265 1e-68
ref|XP_004310003.1| PREDICTED: uncharacterized protein LOC101309... 263 4e-68
ref|XP_002515040.1| RNA binding protein, putative [Ricinus commu... 263 5e-68
ref|XP_006341786.1| PREDICTED: cleavage and polyadenylation spec... 259 7e-67
emb|CBI16834.3| unnamed protein product [Vitis vinifera] 258 2e-66
ref|XP_002312652.1| RNA recognition motif-containing family prot... 253 6e-65
gb|EXB82464.1| Cleavage and polyadenylation specificity factor s... 246 5e-63
ref|XP_006378268.1| hypothetical protein POPTR_0010s06150g [Popu... 239 7e-61
ref|XP_002315647.1| RNA recognition motif-containing family prot... 239 7e-61
gb|EYU30596.1| hypothetical protein MIMGU_mgv1a002773mg [Mimulus... 212 1e-52
>ref|XP_007044902.1| RNA-binding family protein isoform 1 [Theobroma cacao]
gi|590695488|ref|XP_007044903.1| RNA-binding family
protein isoform 1 [Theobroma cacao]
gi|508708837|gb|EOY00734.1| RNA-binding family protein
isoform 1 [Theobroma cacao] gi|508708838|gb|EOY00735.1|
RNA-binding family protein isoform 1 [Theobroma cacao]
Length = 653
Score = 283 bits (723), Expect = 6e-74
Identities = 150/270 (55%), Positives = 187/270 (69%), Gaps = 23/270 (8%)
Frame = -3
Query: 742 LQYQGSGAIPALAEEELMGEDDEYDDLYNDVNVGEGFMQMQQSE-PVSAGGVANEGVQAQ 566
+QYQGSGAIPALA+EE+MGEDDEYDDLYNDVNVGEGF+Q+Q+SE P GG+ + G+QAQ
Sbjct: 22 MQYQGSGAIPALADEEMMGEDDEYDDLYNDVNVGEGFLQLQRSEAPPQPGGMGSTGLQAQ 81
Query: 565 MNDDLGSRIPKHGVSKEVTIPGVEIEKKDSNVGATFPDQITK--------GIGDYPD--E 416
N+ R + G S+ + IPGV ++ K NV A +P+Q + G G YP
Sbjct: 82 KNEAPEPR-GEAGGSQGLNIPGVSVQGKHLNVTARYPEQDGQPAVSRPEMGSGSYPSGTS 140
Query: 415 VSQKGSVSAMGSEAQVGNTEFRGPSPMPPKSGVDPN------------QMSLGPGAPRGV 272
+SQKG V + QV N F+G S K G+DP+ ++ G G P+G
Sbjct: 141 ISQKGRVMEGTQDTQVKNMGFQGLSSASHKVGIDPSGVPQKIANVPAQSLNSGTGGPQGA 200
Query: 271 TQMPINQVNLNANRPMMNENVIRPVVENGNSMLFVGELHWWTTDAELESVLSQYGRVKEI 92
+P NQ+ LN N PM++EN +RP +ENG +MLFVGELHWWTTDAELESVLSQYGRVKEI
Sbjct: 201 PHVPPNQMGLNVNHPMISENQVRPPIENGPTMLFVGELHWWTTDAELESVLSQYGRVKEI 260
Query: 91 KFFDERASGKSKGYCQVEFFESVAASACKE 2
KFFDERASGKSKGYCQVEF++ +A+ACKE
Sbjct: 261 KFFDERASGKSKGYCQVEFYDPASAAACKE 290
>ref|XP_006438179.1| hypothetical protein CICLE_v10030915mg [Citrus clementina]
gi|557540375|gb|ESR51419.1| hypothetical protein
CICLE_v10030915mg [Citrus clementina]
Length = 658
Score = 282 bits (721), Expect = 1e-73
Identities = 157/273 (57%), Positives = 188/273 (68%), Gaps = 26/273 (9%)
Frame = -3
Query: 742 LQYQGSGAIPALAEEELMGEDDEYDDLYNDVNVGEGFMQMQQSE-PVSAGGVANEGVQAQ 566
+QYQG GAIPALA+EELMGEDDEYDDLYNDVNVG+G +Q QQ E P + GV N +Q +
Sbjct: 22 MQYQGGGAIPALADEELMGEDDEYDDLYNDVNVGDGLLQFQQPEAPPPSAGVGNGRLQVK 81
Query: 565 MNDDLGSRIPKHGVSKEVTIPGVEIEKKDSNVGATFPDQI---------TKGIGDYPD-- 419
D ++ + GVS+ +PGV +E K +N G FP Q G G+YPD
Sbjct: 82 KTDVPEQQV-QAGVSQGSNVPGVSVEGKYTNAGTHFPAQNDVQVAVNRPNMGSGNYPDGA 140
Query: 418 EVSQKGSVSAMGSEAQVGNTEFRGPSPMPPKSGVDPNQMS----------LGPGA--PRG 275
VSQKGSV +A V N F+G + PP++GVDP+ M L PGA P+G
Sbjct: 141 SVSQKGSVQETTHDAHVRNMGFQGSTSGPPRTGVDPSNMPGRVANEPAPVLNPGAAGPQG 200
Query: 274 VTQMPINQ--VNLNANRPMMNENVIRPVVENGNSMLFVGELHWWTTDAELESVLSQYGRV 101
+P NQ VN+N NR M+NEN IRP +ENG +MLFVGELHWWTTDAELESVLSQYGRV
Sbjct: 201 AL-IPANQMGVNINVNRAMVNENQIRPPLENGGTMLFVGELHWWTTDAELESVLSQYGRV 259
Query: 100 KEIKFFDERASGKSKGYCQVEFFESVAASACKE 2
KEIKFFDERASGKSKGYCQVEFF++ AA+ACK+
Sbjct: 260 KEIKFFDERASGKSKGYCQVEFFDAAAAAACKD 292
>ref|XP_006483997.1| PREDICTED: cleavage and polyadenylation specificity factor subunit
CG7185-like isoform X1 [Citrus sinensis]
Length = 658
Score = 279 bits (713), Expect = 8e-73
Identities = 156/273 (57%), Positives = 187/273 (68%), Gaps = 26/273 (9%)
Frame = -3
Query: 742 LQYQGSGAIPALAEEELMGEDDEYDDLYNDVNVGEGFMQMQQSE-PVSAGGVANEGVQAQ 566
+QYQG GAIPALA+EELMGEDDEYDDLYNDVNVG+G +Q QQ E P + GV N +Q +
Sbjct: 22 MQYQGGGAIPALADEELMGEDDEYDDLYNDVNVGDGLLQFQQPEAPPPSAGVGNGRLQVK 81
Query: 565 MNDDLGSRIPKHGVSKEVTIPGVEIEKKDSNVGATFPDQI---------TKGIGDYPD-- 419
D ++ + GVS+ +PGV +E K +N G FP Q G G+YPD
Sbjct: 82 KTDVPEQQV-QAGVSQGSNVPGVSVEGKYTNAGTHFPAQNDVQVAVNRPNMGSGNYPDGA 140
Query: 418 EVSQKGSVSAMGSEAQVGNTEFRGPSPMPPKSGVDPNQMS----------LGPGA--PRG 275
VSQKGSV +A V N F+G + P ++GVDP+ M L PGA P+G
Sbjct: 141 SVSQKGSVQETTHDAHVRNMGFQGSTSGPSRTGVDPSNMPGRVANEPAPVLNPGAAGPQG 200
Query: 274 VTQMPINQ--VNLNANRPMMNENVIRPVVENGNSMLFVGELHWWTTDAELESVLSQYGRV 101
+P NQ VN+N NR M+NEN IRP +ENG +MLFVGELHWWTTDAELESVLSQYGRV
Sbjct: 201 AL-IPANQMGVNINVNRAMVNENQIRPPLENGGTMLFVGELHWWTTDAELESVLSQYGRV 259
Query: 100 KEIKFFDERASGKSKGYCQVEFFESVAASACKE 2
KEIKFFDERASGKSKGYCQVEFF++ AA+ACK+
Sbjct: 260 KEIKFFDERASGKSKGYCQVEFFDAAAAAACKD 292
>ref|XP_007044909.1| RNA-binding family protein isoform 6 [Theobroma cacao]
gi|508708844|gb|EOY00741.1| RNA-binding family protein
isoform 6 [Theobroma cacao]
Length = 602
Score = 276 bits (706), Expect = 5e-72
Identities = 146/270 (54%), Positives = 188/270 (69%), Gaps = 23/270 (8%)
Frame = -3
Query: 742 LQYQGSGAIPALAEEELMGEDDEYDDLYNDVNVGEGFMQMQQSE-PVSAGGVANEGVQAQ 566
+QYQGSGAIPALA+EE+MGEDDEYDDLYNDVNVGEGF+Q+Q+SE P+ GG+ + G++AQ
Sbjct: 22 MQYQGSGAIPALADEEMMGEDDEYDDLYNDVNVGEGFLQLQRSEAPLQPGGLGSTGLKAQ 81
Query: 565 MNDDLGSRIPKHGVSKEVTIPGVEIEKKDSNVGATFPDQITKGI--------GDYPD--E 416
N+ R+ G S+ + IPGV ++ K NV A +P++ + G YP
Sbjct: 82 RNEAPEPRVEAGG-SQGLNIPGVSVQGKHPNVSARYPEKEEQPAVNRPEMVSGSYPSGSS 140
Query: 415 VSQKGSVSAMGSEAQVGNTEFRG-----------PSPMPPKSGVDPNQ-MSLGPGAPRGV 272
+SQKGSV+ + QV N F+G PS +P K DP Q ++ G G P+G
Sbjct: 141 ISQKGSVTEGTHDKQVKNLGFQGLTSASNKVGIDPSGVPQKIANDPAQSLNSGTGGPQGP 200
Query: 271 TQMPINQVNLNANRPMMNENVIRPVVENGNSMLFVGELHWWTTDAELESVLSQYGRVKEI 92
+P NQ+ N N P+MNEN ++P +ENG +MLFVGELHWWTTDAELESVLSQYGR+KEI
Sbjct: 201 PHVPPNQMGTNVNHPVMNENQVQPPIENGPTMLFVGELHWWTTDAELESVLSQYGRLKEI 260
Query: 91 KFFDERASGKSKGYCQVEFFESVAASACKE 2
KFFDE+ASGKSKGYCQVEF++ +A+ CKE
Sbjct: 261 KFFDEKASGKSKGYCQVEFYDPSSAAVCKE 290
>ref|XP_007044908.1| RNA-binding family protein isoform 5, partial [Theobroma cacao]
gi|508708843|gb|EOY00740.1| RNA-binding family protein
isoform 5, partial [Theobroma cacao]
Length = 656
Score = 276 bits (706), Expect = 5e-72
Identities = 146/270 (54%), Positives = 188/270 (69%), Gaps = 23/270 (8%)
Frame = -3
Query: 742 LQYQGSGAIPALAEEELMGEDDEYDDLYNDVNVGEGFMQMQQSE-PVSAGGVANEGVQAQ 566
+QYQGSGAIPALA+EE+MGEDDEYDDLYNDVNVGEGF+Q+Q+SE P+ GG+ + G++AQ
Sbjct: 22 MQYQGSGAIPALADEEMMGEDDEYDDLYNDVNVGEGFLQLQRSEAPLQPGGLGSTGLKAQ 81
Query: 565 MNDDLGSRIPKHGVSKEVTIPGVEIEKKDSNVGATFPDQITKGI--------GDYPD--E 416
N+ R+ G S+ + IPGV ++ K NV A +P++ + G YP
Sbjct: 82 RNEAPEPRVEAGG-SQGLNIPGVSVQGKHPNVSARYPEKEEQPAVNRPEMVSGSYPSGSS 140
Query: 415 VSQKGSVSAMGSEAQVGNTEFRG-----------PSPMPPKSGVDPNQ-MSLGPGAPRGV 272
+SQKGSV+ + QV N F+G PS +P K DP Q ++ G G P+G
Sbjct: 141 ISQKGSVTEGTHDKQVKNLGFQGLTSASNKVGIDPSGVPQKIANDPAQSLNSGTGGPQGP 200
Query: 271 TQMPINQVNLNANRPMMNENVIRPVVENGNSMLFVGELHWWTTDAELESVLSQYGRVKEI 92
+P NQ+ N N P+MNEN ++P +ENG +MLFVGELHWWTTDAELESVLSQYGR+KEI
Sbjct: 201 PHVPPNQMGTNVNHPVMNENQVQPPIENGPTMLFVGELHWWTTDAELESVLSQYGRLKEI 260
Query: 91 KFFDERASGKSKGYCQVEFFESVAASACKE 2
KFFDE+ASGKSKGYCQVEF++ +A+ CKE
Sbjct: 261 KFFDEKASGKSKGYCQVEFYDPSSAAVCKE 290
>ref|XP_007044907.1| RNA-binding family protein isoform 4 [Theobroma cacao]
gi|508708842|gb|EOY00739.1| RNA-binding family protein
isoform 4 [Theobroma cacao]
Length = 697
Score = 276 bits (706), Expect = 5e-72
Identities = 146/270 (54%), Positives = 188/270 (69%), Gaps = 23/270 (8%)
Frame = -3
Query: 742 LQYQGSGAIPALAEEELMGEDDEYDDLYNDVNVGEGFMQMQQSE-PVSAGGVANEGVQAQ 566
+QYQGSGAIPALA+EE+MGEDDEYDDLYNDVNVGEGF+Q+Q+SE P+ GG+ + G++AQ
Sbjct: 22 MQYQGSGAIPALADEEMMGEDDEYDDLYNDVNVGEGFLQLQRSEAPLQPGGLGSTGLKAQ 81
Query: 565 MNDDLGSRIPKHGVSKEVTIPGVEIEKKDSNVGATFPDQITKGI--------GDYPD--E 416
N+ R+ G S+ + IPGV ++ K NV A +P++ + G YP
Sbjct: 82 RNEAPEPRVEAGG-SQGLNIPGVSVQGKHPNVSARYPEKEEQPAVNRPEMVSGSYPSGSS 140
Query: 415 VSQKGSVSAMGSEAQVGNTEFRG-----------PSPMPPKSGVDPNQ-MSLGPGAPRGV 272
+SQKGSV+ + QV N F+G PS +P K DP Q ++ G G P+G
Sbjct: 141 ISQKGSVTEGTHDKQVKNLGFQGLTSASNKVGIDPSGVPQKIANDPAQSLNSGTGGPQGP 200
Query: 271 TQMPINQVNLNANRPMMNENVIRPVVENGNSMLFVGELHWWTTDAELESVLSQYGRVKEI 92
+P NQ+ N N P+MNEN ++P +ENG +MLFVGELHWWTTDAELESVLSQYGR+KEI
Sbjct: 201 PHVPPNQMGTNVNHPVMNENQVQPPIENGPTMLFVGELHWWTTDAELESVLSQYGRLKEI 260
Query: 91 KFFDERASGKSKGYCQVEFFESVAASACKE 2
KFFDE+ASGKSKGYCQVEF++ +A+ CKE
Sbjct: 261 KFFDEKASGKSKGYCQVEFYDPSSAAVCKE 290
>ref|XP_007044904.1| RNA-binding family protein isoform 1 [Theobroma cacao]
gi|590695496|ref|XP_007044905.1| RNA-binding family
protein isoform 1 [Theobroma cacao]
gi|590695500|ref|XP_007044906.1| RNA-binding family
protein isoform 1 [Theobroma cacao]
gi|508708839|gb|EOY00736.1| RNA-binding family protein
isoform 1 [Theobroma cacao] gi|508708840|gb|EOY00737.1|
RNA-binding family protein isoform 1 [Theobroma cacao]
gi|508708841|gb|EOY00738.1| RNA-binding family protein
isoform 1 [Theobroma cacao]
Length = 652
Score = 276 bits (706), Expect = 5e-72
Identities = 146/270 (54%), Positives = 188/270 (69%), Gaps = 23/270 (8%)
Frame = -3
Query: 742 LQYQGSGAIPALAEEELMGEDDEYDDLYNDVNVGEGFMQMQQSE-PVSAGGVANEGVQAQ 566
+QYQGSGAIPALA+EE+MGEDDEYDDLYNDVNVGEGF+Q+Q+SE P+ GG+ + G++AQ
Sbjct: 22 MQYQGSGAIPALADEEMMGEDDEYDDLYNDVNVGEGFLQLQRSEAPLQPGGLGSTGLKAQ 81
Query: 565 MNDDLGSRIPKHGVSKEVTIPGVEIEKKDSNVGATFPDQITKGI--------GDYPD--E 416
N+ R+ G S+ + IPGV ++ K NV A +P++ + G YP
Sbjct: 82 RNEAPEPRVEAGG-SQGLNIPGVSVQGKHPNVSARYPEKEEQPAVNRPEMVSGSYPSGSS 140
Query: 415 VSQKGSVSAMGSEAQVGNTEFRG-----------PSPMPPKSGVDPNQ-MSLGPGAPRGV 272
+SQKGSV+ + QV N F+G PS +P K DP Q ++ G G P+G
Sbjct: 141 ISQKGSVTEGTHDKQVKNLGFQGLTSASNKVGIDPSGVPQKIANDPAQSLNSGTGGPQGP 200
Query: 271 TQMPINQVNLNANRPMMNENVIRPVVENGNSMLFVGELHWWTTDAELESVLSQYGRVKEI 92
+P NQ+ N N P+MNEN ++P +ENG +MLFVGELHWWTTDAELESVLSQYGR+KEI
Sbjct: 201 PHVPPNQMGTNVNHPVMNENQVQPPIENGPTMLFVGELHWWTTDAELESVLSQYGRLKEI 260
Query: 91 KFFDERASGKSKGYCQVEFFESVAASACKE 2
KFFDE+ASGKSKGYCQVEF++ +A+ CKE
Sbjct: 261 KFFDEKASGKSKGYCQVEFYDPSSAAVCKE 290
>ref|XP_006483998.1| PREDICTED: cleavage and polyadenylation specificity factor subunit
CG7185-like isoform X1 [Citrus sinensis]
Length = 655
Score = 275 bits (703), Expect = 1e-71
Identities = 156/273 (57%), Positives = 184/273 (67%), Gaps = 26/273 (9%)
Frame = -3
Query: 742 LQYQGSGAIPALAEEELMGEDDEYDDLYNDVNVGEGFMQMQQSE-PVSAGGVANEGVQAQ 566
+QYQG GAIPALA+EELMGEDDEYDDLYNDVNVG+G +Q QQ E P + GV N +Q +
Sbjct: 19 MQYQGGGAIPALADEELMGEDDEYDDLYNDVNVGDGLLQFQQPEAPPPSAGVGNGRLQVK 78
Query: 565 MNDDLGSRIPKHGVSKEVTIPGVEIEKKDSNVGATFPDQI---------TKGIGDYPD-- 419
D R+ G S+ IPGV +E K +N G+ FP Q G G+YPD
Sbjct: 79 KTDVPEQRVQVGG-SQGSNIPGVSVEGKYTNAGSHFPAQNDVQVAVNRPNMGSGNYPDGA 137
Query: 418 EVSQKGSVSAMGSEAQVGNTEFRGPSPMPPKSGVDPNQMS----------LGPGA--PRG 275
VSQKGSV +A V N F+G + P ++GVDP+ M L PGA P+G
Sbjct: 138 SVSQKGSVQETTHDAHVRNMGFQGSTSGPSRTGVDPSNMPGRVANEPAPVLNPGAAGPQG 197
Query: 274 VTQMPINQ--VNLNANRPMMNENVIRPVVENGNSMLFVGELHWWTTDAELESVLSQYGRV 101
+P NQ VN N NR M+NEN IRP +ENG +MLFVGELHWWTTDAELESVLSQYGR
Sbjct: 198 AL-IPANQMGVNANVNRVMVNENQIRPPLENGGTMLFVGELHWWTTDAELESVLSQYGRA 256
Query: 100 KEIKFFDERASGKSKGYCQVEFFESVAASACKE 2
KEIKFFDERASGKSKGYCQVEFF++ AA+ACK+
Sbjct: 257 KEIKFFDERASGKSKGYCQVEFFDAAAAAACKD 289
>ref|XP_006438180.1| hypothetical protein CICLE_v10030917mg [Citrus clementina]
gi|567891321|ref|XP_006438181.1| hypothetical protein
CICLE_v10030917mg [Citrus clementina]
gi|557540376|gb|ESR51420.1| hypothetical protein
CICLE_v10030917mg [Citrus clementina]
gi|557540377|gb|ESR51421.1| hypothetical protein
CICLE_v10030917mg [Citrus clementina]
Length = 655
Score = 275 bits (703), Expect = 1e-71
Identities = 155/273 (56%), Positives = 184/273 (67%), Gaps = 26/273 (9%)
Frame = -3
Query: 742 LQYQGSGAIPALAEEELMGEDDEYDDLYNDVNVGEGFMQMQQSE-PVSAGGVANEGVQAQ 566
+QYQG GAIPALA+EELMGEDDEYDDLYND+NVG+G +Q QQ E P + GV N +Q +
Sbjct: 19 MQYQGGGAIPALADEELMGEDDEYDDLYNDINVGDGLLQFQQPEAPPPSAGVGNGRLQVK 78
Query: 565 MNDDLGSRIPKHGVSKEVTIPGVEIEKKDSNVGATFPDQI---------TKGIGDYPD-- 419
D R+ G S+ IPGV +E K +N G+ FP Q G G+YPD
Sbjct: 79 KTDVPEQRVQVGG-SQGSNIPGVSVEGKYTNAGSDFPAQNDVQVAVNRPNMGSGNYPDGA 137
Query: 418 EVSQKGSVSAMGSEAQVGNTEFRGPSPMPPKSGVDPNQMS----------LGPGA--PRG 275
VSQKGSV +A V N F+G + P ++GVDP+ M L PGA P+G
Sbjct: 138 SVSQKGSVQETTHDAHVRNMGFQGSTSGPSRTGVDPSNMPGRAANEPAPVLNPGAAGPQG 197
Query: 274 VTQMPINQ--VNLNANRPMMNENVIRPVVENGNSMLFVGELHWWTTDAELESVLSQYGRV 101
+P NQ VN N NR M+NEN IRP +ENG +MLFVGELHWWTTDAELESVLSQYGR
Sbjct: 198 AL-IPANQMGVNANVNRVMVNENQIRPPLENGGTMLFVGELHWWTTDAELESVLSQYGRA 256
Query: 100 KEIKFFDERASGKSKGYCQVEFFESVAASACKE 2
KEIKFFDERASGKSKGYCQVEFF++ AA+ACK+
Sbjct: 257 KEIKFFDERASGKSKGYCQVEFFDAAAAAACKD 289
>ref|XP_007225677.1| hypothetical protein PRUPE_ppa002814mg [Prunus persica]
gi|462422613|gb|EMJ26876.1| hypothetical protein
PRUPE_ppa002814mg [Prunus persica]
Length = 630
Score = 271 bits (692), Expect = 2e-70
Identities = 153/262 (58%), Positives = 181/262 (69%), Gaps = 15/262 (5%)
Frame = -3
Query: 742 LQYQGSGAIPALAEEELMGEDDEYDDLYNDVNVGEGFMQMQQSE-PVSAGGVANEGVQAQ 566
LQYQGSGAI ALA+EE M EDDEYDDLYNDVNV EGF+QM +SE P+ GGV N G+QAQ
Sbjct: 19 LQYQGSGAISALADEEPMVEDDEYDDLYNDVNVREGFLQMHRSEAPLPPGGVGNGGLQAQ 78
Query: 565 MNDDLGSRIPKHGVSKEVTIPGVEIEKKDSNVGATFPDQITKGIGDYPDEVSQKGSVSAM 386
D +R+ + GVS+E IPGV ++ K S+ A FP+Q G P +
Sbjct: 79 KTDVTETRV-QAGVSQESKIPGVSVQGKYSSAVAQFPEQQ----GQPP-----------V 122
Query: 385 GSEAQVGNTEFRGPSPMPPKSGVDPNQ------------MSLGPGAPRGVTQMPINQVNL 242
E ++G+T + G + MPP G D + M+ G P GVTQMP NQ+++
Sbjct: 123 AKEPELGSTGY-GSTTMPPNVGGDSSDITGKTALESVPSMNSGTAGPTGVTQMPTNQISI 181
Query: 241 --NANRPMMNENVIRPVVENGNSMLFVGELHWWTTDAELESVLSQYGRVKEIKFFDERAS 68
NANRPM NEN IRP VENG++MLFVGELHWWTTDAELESVLSQYGRVKEIKFFDERAS
Sbjct: 182 KVNANRPMFNENQIRPPVENGSTMLFVGELHWWTTDAELESVLSQYGRVKEIKFFDERAS 241
Query: 67 GKSKGYCQVEFFESVAASACKE 2
GKSKGYCQVEF + AA+ACKE
Sbjct: 242 GKSKGYCQVEFHDPAAATACKE 263
>ref|XP_002282072.2| PREDICTED: uncharacterized protein LOC100268141 isoform 1 [Vitis
vinifera] gi|359473133|ref|XP_003631251.1| PREDICTED:
uncharacterized protein LOC100268141 isoform 2 [Vitis
vinifera]
Length = 647
Score = 265 bits (678), Expect = 1e-68
Identities = 147/271 (54%), Positives = 180/271 (66%), Gaps = 24/271 (8%)
Frame = -3
Query: 742 LQYQGSGAIPALAEEELMGEDDEYDDLYNDVNVGEGFMQMQQSEPVSAGGVANEGVQAQM 563
+ +QG GAI ALA++ELMGEDDEYDDLYNDVNVGEGF+QM +SE + GV G
Sbjct: 19 MPFQGGGAISALADDELMGEDDEYDDLYNDVNVGEGFLQMHRSEAPAPSGVMAGGPFQAH 78
Query: 562 NDDLGSRIPKHGVSKEVTIPGVEIEKKDSN----------VGATFPDQITKGIGDYPDEV 413
D+ + + G S+ + IPGV IE K SN + P+ + D P V
Sbjct: 79 KTDVPPQKLEAGTSQGLIIPGVSIEGKYSNPHFHEKKEGPMAVKGPEMGSTSHLDGPS-V 137
Query: 412 SQKGSVSAMGSEAQVGNTEFRGPSPMPPKSGVDPNQ------------MSLGPGAPRGVT 269
SQKG V M + QV N F+G +P+P K+G +P+ ++ G G PR V
Sbjct: 138 SQKGRVLEMTHDTQVRNLGFQGSTPIPQKTGAEPSDVHGKIANESTPVLNSGTGGPRAVP 197
Query: 268 QMPINQV--NLNANRPMMNENVIRPVVENGNSMLFVGELHWWTTDAELESVLSQYGRVKE 95
QM NQ+ N+N NRPM+NEN IRP V+NG +MLFVGELHWWTTDAELESVLSQYGRVKE
Sbjct: 198 QMLSNQMGMNVNVNRPMVNENQIRPAVDNGATMLFVGELHWWTTDAELESVLSQYGRVKE 257
Query: 94 IKFFDERASGKSKGYCQVEFFESVAASACKE 2
IKFFDERASGKSKGYCQVEF+++ AA+ACKE
Sbjct: 258 IKFFDERASGKSKGYCQVEFYDASAAAACKE 288
>ref|XP_004310003.1| PREDICTED: uncharacterized protein LOC101309507 [Fragaria vesca
subsp. vesca]
Length = 646
Score = 263 bits (673), Expect = 4e-68
Identities = 148/263 (56%), Positives = 178/263 (67%), Gaps = 16/263 (6%)
Frame = -3
Query: 742 LQYQGSGAIPALAEEELMGEDDEYDDLYNDVNVGEGFMQMQQSEP-VSAGGVANEGVQAQ 566
LQYQ SGAIPALA+EE M EDDEYDDLYNDVNVGEGF+QM + EP + GV N G+QAQ
Sbjct: 22 LQYQESGAIPALADEEPMVEDDEYDDLYNDVNVGEGFLQMHRPEPPLPPAGVGNGGLQAQ 81
Query: 565 MNDDLGSRIPKHGVSKEVTIPGVEIEKKDSNVGATFPDQITKG-IGDYPDEVSQKGSVSA 389
N+ R+ + G S+EV PG +E K S+V P+Q + + P+ SQKG V
Sbjct: 82 KNNVPEQRV-QGGASQEVKNPGFSVEGKYSSV----PEQKDQPPVSVVPEMASQKGRVME 136
Query: 388 MGSEAQVGNTEFRGPSPMPPKSGVDPNQ------------MSLGPGAPRGVTQMPINQVN 245
M +AQV N F+G + M D + M+ G P V QMP NQ+N
Sbjct: 137 MTHDAQVRNMGFQGAATMQSNVVADSSDLTGKIANGPIPSMNSGSNGPPAVQQMPANQMN 196
Query: 244 L--NANRPMMNENVIRPVVENGNSMLFVGELHWWTTDAELESVLSQYGRVKEIKFFDERA 71
+ N NRPM+NEN IRP VENG++ LFVGELHWWTTDAELE VLSQ+GR+KEIKFFDERA
Sbjct: 197 MKINVNRPMVNENQIRPPVENGSATLFVGELHWWTTDAELEGVLSQFGRIKEIKFFDERA 256
Query: 70 SGKSKGYCQVEFFESVAASACKE 2
SGKSKGYCQV+F++ AASACKE
Sbjct: 257 SGKSKGYCQVDFYDPAAASACKE 279
>ref|XP_002515040.1| RNA binding protein, putative [Ricinus communis]
gi|223546091|gb|EEF47594.1| RNA binding protein,
putative [Ricinus communis]
Length = 644
Score = 263 bits (672), Expect = 5e-68
Identities = 152/266 (57%), Positives = 187/266 (70%), Gaps = 19/266 (7%)
Frame = -3
Query: 742 LQYQGSGAIPALAEEELMGEDDEYDDLYNDVNVGEGFMQMQQSE-PVSAGGVANEGVQAQ 566
LQYQGSGAIPALAEEE MGEDDEYDDLYNDVN+GE F+QM +SE P + V N G Q +
Sbjct: 19 LQYQGSGAIPALAEEE-MGEDDEYDDLYNDVNIGENFLQMHRSEAPPAPPSVGNGGFQPR 77
Query: 565 MNDDLGSRIPKHGVSKEVTIPGVEIEKKDSNVGATFPDQITKG--IGD--YPD--EVSQK 404
++DL R+ G S+ + IPGV +E K S G FP+Q KG IG YPD ++QK
Sbjct: 78 NSNDL--RVESGG-SQGLNIPGVAVESKYST-GTHFPEQNVKGPEIGSVGYPDGSSIAQK 133
Query: 403 GSVSAMGSEAQVGNTEFRGPSPMPPKSGVDP----NQMSLGP------GAPRGVTQMPIN 254
V M +++Q N F+G + P GVDP N++S P G PR + Q+P +
Sbjct: 134 TRVMEMTNDSQARNMGFQGSTSGPSNIGVDPSDMNNKISNDPTPVPNAGVPRVIPQLPAS 193
Query: 253 QVNLN--ANRPMMNENVIRPVVENGNSMLFVGELHWWTTDAELESVLSQYGRVKEIKFFD 80
Q+N+N NR NEN IRP +ENG++ML+VGELHWWTTDAELE+VLSQYG VKEIKFFD
Sbjct: 194 QMNMNMDTNRSATNENQIRPPLENGSTMLYVGELHWWTTDAELENVLSQYGMVKEIKFFD 253
Query: 79 ERASGKSKGYCQVEFFESVAASACKE 2
ERASGKSKGYCQVEF+++ AA+ACKE
Sbjct: 254 ERASGKSKGYCQVEFYDAAAAAACKE 279
>ref|XP_006341786.1| PREDICTED: cleavage and polyadenylation specificity factor subunit
CG7185-like isoform X1 [Solanum tuberosum]
gi|565349616|ref|XP_006341787.1| PREDICTED: cleavage and
polyadenylation specificity factor subunit CG7185-like
isoform X2 [Solanum tuberosum]
Length = 648
Score = 259 bits (662), Expect = 7e-67
Identities = 145/271 (53%), Positives = 178/271 (65%), Gaps = 24/271 (8%)
Frame = -3
Query: 742 LQYQGSGAIPALAEEELMGEDDEYDDLYNDVNVGEGFMQMQQSE-PVSAGGVANEGVQAQ 566
+QY GSG IPALAE+E+MGEDDEYDDLYNDVN+GEGF+Q+Q+SE PV + N QAQ
Sbjct: 22 MQYHGSGTIPALAEDEMMGEDDEYDDLYNDVNIGEGFLQLQRSEVPVPSVDAGNGNFQAQ 81
Query: 565 MNDDLGSRIPKHGVSKEVTIPGVEIEKKDSNVGATFPDQ----ITKGIGDYPDEVSQKGS 398
+ SR G S+E IPG+ E K + FP Q + + + P + +QK
Sbjct: 82 KDSFPASRAGGLG-SEEAKIPGIATEGKYAGTEVQFPQQKGEPVVERETERPADAAQKAR 140
Query: 397 VSA--MGSEAQVGNTEFRGPSPMPPKSGVDPNQM-------------SLGPGAPRGVTQM 263
SA M +Q GN+ ++G PMP K G DP M S+ PG PR V M
Sbjct: 141 PSAITMTLNSQAGNSGYQGSMPMPQKIGADPMAMPEKNASEATPLMNSVVPG-PRVVPHM 199
Query: 262 PINQVN----LNANRPMMNENVIRPVVENGNSMLFVGELHWWTTDAELESVLSQYGRVKE 95
P NQ+N +N N P+++E RP +ENGN+MLFVGELHWWTTDAELESVL+QYG VKE
Sbjct: 200 PTNQLNSSGNVNMNNPVISETPFRPSLENGNTMLFVGELHWWTTDAELESVLTQYGNVKE 259
Query: 94 IKFFDERASGKSKGYCQVEFFESVAASACKE 2
IKFFDERASGKSKGYCQVEFF+ +A+ACKE
Sbjct: 260 IKFFDERASGKSKGYCQVEFFDPASAAACKE 290
>emb|CBI16834.3| unnamed protein product [Vitis vinifera]
Length = 491
Score = 258 bits (659), Expect = 2e-66
Identities = 144/268 (53%), Positives = 177/268 (66%), Gaps = 24/268 (8%)
Frame = -3
Query: 742 LQYQGSGAIPALAEEELMGEDDEYDDLYNDVNVGEGFMQMQQSEPVSAGGVANEGVQAQM 563
+ +QG GAI ALA++ELMGEDDEYDDLYNDVNVGEGF+QM +SE + GV G
Sbjct: 1 MPFQGGGAISALADDELMGEDDEYDDLYNDVNVGEGFLQMHRSEAPAPSGVMAGGPFQAH 60
Query: 562 NDDLGSRIPKHGVSKEVTIPGVEIEKKDSN----------VGATFPDQITKGIGDYPDEV 413
D+ + + G S+ + IPGV IE K SN + P+ + D P V
Sbjct: 61 KTDVPPQKLEAGTSQGLIIPGVSIEGKYSNPHFHEKKEGPMAVKGPEMGSTSHLDGPS-V 119
Query: 412 SQKGSVSAMGSEAQVGNTEFRGPSPMPPKSGVDPNQ------------MSLGPGAPRGVT 269
SQKG V M + QV N F+G +P+P K+G +P+ ++ G G PR V
Sbjct: 120 SQKGRVLEMTHDTQVRNLGFQGSTPIPQKTGAEPSDVHGKIANESTPVLNSGTGGPRAVP 179
Query: 268 QMPINQV--NLNANRPMMNENVIRPVVENGNSMLFVGELHWWTTDAELESVLSQYGRVKE 95
QM NQ+ N+N NRPM+NEN IRP V+NG +MLFVGELHWWTTDAELESVLSQYGRVKE
Sbjct: 180 QMLSNQMGMNVNVNRPMVNENQIRPAVDNGATMLFVGELHWWTTDAELESVLSQYGRVKE 239
Query: 94 IKFFDERASGKSKGYCQVEFFESVAASA 11
IKFFDERASGKSKGYCQVEF+++ AA+A
Sbjct: 240 IKFFDERASGKSKGYCQVEFYDASAAAA 267
>ref|XP_002312652.1| RNA recognition motif-containing family protein [Populus
trichocarpa] gi|222852472|gb|EEE90019.1| RNA recognition
motif-containing family protein [Populus trichocarpa]
Length = 619
Score = 253 bits (645), Expect = 6e-65
Identities = 144/271 (53%), Positives = 176/271 (64%), Gaps = 24/271 (8%)
Frame = -3
Query: 742 LQYQGSGAIPALAEEELMGEDDEYDDLYNDVNVGEGFMQMQQSE-PVSAGGVANEGVQAQ 566
+QYQGSGAIPALAEEE MGEDDEYDDLYNDVNVGE F+QM SE P V N G Q +
Sbjct: 9 MQYQGSGAIPALAEEE-MGEDDEYDDLYNDVNVGENFLQMHGSEAPAPPATVGNGGFQTR 67
Query: 565 MNDDLGSRIPKHGVSK-EVTIPGVEIEKKDSNVGATFPDQITKGIGDYPDEV-------- 413
+ SRI G +T G +E SN A FP+Q + +V
Sbjct: 68 NAHE--SRIETGGSQALAITGGGPAVEGIYSNAKAHFPEQKQVAVAVEAQDVGPVDGSSV 125
Query: 412 SQKGSVSAMGSEAQVGNTEFRGPSPMPPKSGVDPNQMS------------LGPGAPRGVT 269
+QKG V M + QV N F+ +P+PP GVDP+ MS G PRG
Sbjct: 126 AQKGRVIEMSHDVQVRNMGFQKSTPVPPGIGVDPSDMSRKNAIEPEPLPITGSAGPRGAP 185
Query: 268 QMPINQVNLNA--NRPMMNENVIRPVVENGNSMLFVGELHWWTTDAELESVLSQYGRVKE 95
QM +NQ++++A NRP++NEN +RP +ENG++ L+VGELHWWTTDAELES SQ+GRVKE
Sbjct: 186 QMQVNQMHMSADVNRPVVNENQVRPPIENGSTTLYVGELHWWTTDAELESFASQFGRVKE 245
Query: 94 IKFFDERASGKSKGYCQVEFFESVAASACKE 2
IKFFDERASGKSKGYCQV+F+E+ AA+ACKE
Sbjct: 246 IKFFDERASGKSKGYCQVDFYEAAAAAACKE 276
>gb|EXB82464.1| Cleavage and polyadenylation specificity factor subunit [Morus
notabilis]
Length = 636
Score = 246 bits (629), Expect = 5e-63
Identities = 149/268 (55%), Positives = 180/268 (67%), Gaps = 22/268 (8%)
Frame = -3
Query: 739 QYQGSG-AIPALAEEELMGEDDEYDDLYNDVNVGEGFMQMQQSEPVS---AGGVANEGVQ 572
QYQGSG AI ALA+EELMG+DDEYDDLYNDVNVGEGF+Q+Q+SE S A GV N G+Q
Sbjct: 20 QYQGSGGAISALADEELMGDDDEYDDLYNDVNVGEGFLQLQRSEAPSLPAAAGVGN-GLQ 78
Query: 571 AQMNDDLGSRIPKHGVSKEVTIPGVEIEKKDSNVGATFPDQITKGIGDYPDEVSQKGSV- 395
AQ + R + G S++ IPGV E + S+ G+ FP Q G D+ S+ GS+
Sbjct: 79 AQKRNFPEPR-EEIGGSQQPNIPGVSAEGRFSSAGSQFPGQQD---GLKVDKKSEAGSMV 134
Query: 394 ---SAMGSEAQVGNTEFRGPSPMPPKSGVD----PNQM--------SLGPGAPRGVTQMP 260
A GS+ F+G PM GVD P +M + G PRG+ M
Sbjct: 135 YPDGASGSQKGRIVAGFQGSKPMLHSVGVDSSDIPGKMVNEPIQAPNSGGAGPRGILPMQ 194
Query: 259 INQVNLNAN--RPMMNENVIRPVVENGNSMLFVGELHWWTTDAELESVLSQYGRVKEIKF 86
NQ +NAN P++NEN IRP +ENG++MLFVGELHWWTTDAELESVLSQYGRVKEIKF
Sbjct: 195 GNQTTVNANVSHPIVNENQIRPSIENGSTMLFVGELHWWTTDAELESVLSQYGRVKEIKF 254
Query: 85 FDERASGKSKGYCQVEFFESVAASACKE 2
FDERASGKSKGYCQVE++++ AA ACKE
Sbjct: 255 FDERASGKSKGYCQVEYYDAAAAVACKE 282
>ref|XP_006378268.1| hypothetical protein POPTR_0010s06150g [Populus trichocarpa]
gi|550329195|gb|ERP56065.1| hypothetical protein
POPTR_0010s06150g [Populus trichocarpa]
Length = 591
Score = 239 bits (610), Expect = 7e-61
Identities = 138/251 (54%), Positives = 161/251 (64%), Gaps = 4/251 (1%)
Frame = -3
Query: 742 LQYQGSGAIPALAEEELMGEDDEYDDLYNDVNVGEGFMQMQQSE-PVSAGGVANEGVQAQ 566
+QYQGSGAIPALAEEEL GEDDEYDDLYNDVNVGE F+QM SE P N G Q +
Sbjct: 9 MQYQGSGAIPALAEEEL-GEDDEYDDLYNDVNVGENFLQMHGSEAPAPPATAGNGGFQTR 67
Query: 565 MNDDLGSRIPKHGVSKEVTI-PGVEIEKKDSNVGATFPDQITKGIGDYPDEVSQKGSVSA 389
+ SR+ G T GV +E K SN GA FP+Q GIG ++V G
Sbjct: 68 NAHE--SRVETGGSQVLATSGAGVAVEGKYSNAGAHFPEQKQAGIGVEANDVGSIG---- 121
Query: 388 MGSEAQVGNTEFRGPSPMPPKSGVDPNQMSLGPGAPRGVTQMPINQVNLNA--NRPMMNE 215
G + V G PRGV QM +NQ+N+NA NRP++NE
Sbjct: 122 YGDGSSVAQK---------------------GSAGPRGVPQMQVNQMNMNADVNRPVVNE 160
Query: 214 NVIRPVVENGNSMLFVGELHWWTTDAELESVLSQYGRVKEIKFFDERASGKSKGYCQVEF 35
N +RP +ENG + L+VGELHWWTTDAELESV SQYGRVKEIKFFDERASGKSKGYCQV+F
Sbjct: 161 NQVRPPIENGPTTLYVGELHWWTTDAELESVASQYGRVKEIKFFDERASGKSKGYCQVDF 220
Query: 34 FESVAASACKE 2
+E+ AA+ACKE
Sbjct: 221 YEAAAAAACKE 231
>ref|XP_002315647.1| RNA recognition motif-containing family protein [Populus
trichocarpa] gi|222864687|gb|EEF01818.1| RNA recognition
motif-containing family protein [Populus trichocarpa]
Length = 573
Score = 239 bits (610), Expect = 7e-61
Identities = 138/251 (54%), Positives = 161/251 (64%), Gaps = 4/251 (1%)
Frame = -3
Query: 742 LQYQGSGAIPALAEEELMGEDDEYDDLYNDVNVGEGFMQMQQSE-PVSAGGVANEGVQAQ 566
+QYQGSGAIPALAEEEL GEDDEYDDLYNDVNVGE F+QM SE P N G Q +
Sbjct: 9 MQYQGSGAIPALAEEEL-GEDDEYDDLYNDVNVGENFLQMHGSEAPAPPATAGNGGFQTR 67
Query: 565 MNDDLGSRIPKHGVSKEVTI-PGVEIEKKDSNVGATFPDQITKGIGDYPDEVSQKGSVSA 389
+ SR+ G T GV +E K SN GA FP+Q GIG ++V G
Sbjct: 68 NAHE--SRVETGGSQVLATSGAGVAVEGKYSNAGAHFPEQKQAGIGVEANDVGSIG---- 121
Query: 388 MGSEAQVGNTEFRGPSPMPPKSGVDPNQMSLGPGAPRGVTQMPINQVNLNA--NRPMMNE 215
G + V G PRGV QM +NQ+N+NA NRP++NE
Sbjct: 122 YGDGSSVAQK---------------------GSAGPRGVPQMQVNQMNMNADVNRPVVNE 160
Query: 214 NVIRPVVENGNSMLFVGELHWWTTDAELESVLSQYGRVKEIKFFDERASGKSKGYCQVEF 35
N +RP +ENG + L+VGELHWWTTDAELESV SQYGRVKEIKFFDERASGKSKGYCQV+F
Sbjct: 161 NQVRPPIENGPTTLYVGELHWWTTDAELESVASQYGRVKEIKFFDERASGKSKGYCQVDF 220
Query: 34 FESVAASACKE 2
+E+ AA+ACKE
Sbjct: 221 YEAAAAAACKE 231
>gb|EYU30596.1| hypothetical protein MIMGU_mgv1a002773mg [Mimulus guttatus]
Length = 639
Score = 212 bits (540), Expect = 1e-52
Identities = 127/270 (47%), Positives = 158/270 (58%), Gaps = 23/270 (8%)
Frame = -3
Query: 742 LQYQGSGAIPALAEEELMGEDDEYDDLYNDVNVGEGFMQMQQSEPVSAGGVANEGVQAQM 563
+QY GAIPALAE+E++G+DDEYDDLYNDVNVGEGFMQMQ+SE V N
Sbjct: 22 MQYHHGGAIPALAEDEMIGDDDEYDDLYNDVNVGEGFMQMQRSEAPPPSAVGNNSFSISK 81
Query: 562 NDDLGSRIPKHGVSKEVTIPGVEIEKKDSNVGATFPDQITK----GIGDYPDEVSQKGSV 395
N G+R S+EV V E + G DQ G P + SQ+ +
Sbjct: 82 NTAPGTRAEAIA-SQEVNNGRVGNEGSYAPNGVQLSDQKNNLTAVGGPAQPVDASQRVRL 140
Query: 394 SAMGSEAQVGNTEFRGPSPMPPKSGVDPNQMSLG------------PGAPRGVTQMPIN- 254
+ + +Q + ++G M K+ D S G+ +GV Q P N
Sbjct: 141 PEVANSSQAAHLGYQGSEIMLHKTATDRMNNSENIVGEPASLVYPNTGSSKGVPQAPSNL 200
Query: 253 -----QVNLNANRPMMNENVIRPVV-ENGNSMLFVGELHWWTTDAELESVLSQYGRVKEI 92
VN+N NR M +E +IRP ENGN M++VGELHWWTTDAE+ESVL QYGRVKEI
Sbjct: 201 MNSNANVNVNVNRSMDDEYLIRPSGGENGNPMIYVGELHWWTTDAEVESVLIQYGRVKEI 260
Query: 91 KFFDERASGKSKGYCQVEFFESVAASACKE 2
KFFDERASGKSKGYCQVEF++ AA+ACK+
Sbjct: 261 KFFDERASGKSKGYCQVEFYDPAAATACKD 290