BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Akebia27_contig00007364
         (1941 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002524027.1| RNA polymerase sigma factor rpoD, putative [...   714   0.0  
ref|XP_006484698.1| PREDICTED: RNA polymerase sigma factor sigA-...   706   0.0  
ref|XP_006437403.1| hypothetical protein CICLE_v10031289mg [Citr...   705   0.0  
ref|XP_007029766.1| Sigma factor A isoform 1 [Theobroma cacao] g...   700   0.0  
ref|XP_002325882.1| RNA POLYMERASE SIGMA SUBUNIT 1 family protei...   699   0.0  
ref|XP_007219023.1| hypothetical protein PRUPE_ppa004393mg [Prun...   688   0.0  
dbj|BAA88921.1| sigma factor [Nicotiana tabacum]                      676   0.0  
ref|XP_003539986.1| PREDICTED: RNA polymerase sigma factor sigA-...   670   0.0  
ref|XP_004151855.1| PREDICTED: RNA polymerase sigma factor sigA-...   669   0.0  
ref|XP_006878659.1| hypothetical protein AMTR_s00011p00266100 [A...   667   0.0  
ref|XP_002319237.2| hypothetical protein POPTR_0013s07290g [Popu...   665   0.0  
ref|XP_004235299.1| PREDICTED: RNA polymerase sigma factor sigA-...   664   0.0  
ref|XP_003534364.1| PREDICTED: RNA polymerase sigma factor sigA-...   660   0.0  
ref|XP_004307835.1| PREDICTED: RNA polymerase sigma factor sigA-...   659   0.0  
emb|CBI26421.3| unnamed protein product [Vitis vinifera]              656   0.0  
dbj|BAA88922.1| sigma factor [Nicotiana tabacum]                      652   0.0  
ref|XP_002264964.2| PREDICTED: RNA polymerase sigma-B factor-lik...   651   0.0  
ref|XP_007131471.1| hypothetical protein PHAVU_011G016400g [Phas...   650   0.0  
ref|XP_006419162.1| hypothetical protein EUTSA_v10002486mg [Eutr...   649   0.0  
ref|XP_006347341.1| PREDICTED: RNA polymerase sigma factor sigA-...   638   e-180

>ref|XP_002524027.1| RNA polymerase sigma factor rpoD, putative [Ricinus communis]
            gi|223536754|gb|EEF38395.1| RNA polymerase sigma factor
            rpoD, putative [Ricinus communis]
          Length = 508

 Score =  714 bits (1842), Expect = 0.0
 Identities = 377/508 (74%), Positives = 424/508 (83%), Gaps = 2/508 (0%)
 Frame = -1

Query: 1716 MATAAVIGLSAGKRLLSSSSYYSDITDKLLPFHDYGLTQYQTSLAKNVTIAKKSSNFGLN 1537
            MATAAVIGLSAGKRLLSS+ YYSD+T+KL   +++GLT YQ +  K + +AKKSSN+G +
Sbjct: 1    MATAAVIGLSAGKRLLSSTFYYSDLTEKLSSANEHGLTHYQITSTKTLIVAKKSSNYGPS 60

Query: 1536 FPS-NRHTEHINALKEHVDASSTPATDAWLQRS-NFIEEGSSDIESSVEVLLLLQKSMLE 1363
            FPS NR+T+ I ALKEHVD +S P+T A   ++ N +EE SSD++ SVE LLLLQKSMLE
Sbjct: 61   FPSSNRNTQSIKALKEHVDTASAPSTAATQFKTFNDMEEESSDLDYSVEALLLLQKSMLE 120

Query: 1362 KQWNLSFEQRRIMGVPGDERLKKFQVTXXXXXXXXXXXXXXXXSLDQNSIEVPPGRRKHF 1183
            KQWNLSFE+      P  +  KK  VT                +L Q+   V     K  
Sbjct: 121  KQWNLSFERTDSSDSPSRKSQKKIPVTCSGVSARQRRINIRRKNLSQSKFTVQANVFKQL 180

Query: 1182 RSIVSPELLQSRLKGYVKGVTSEELLTHAEVVHLSKKIKAGLSLEDHKSRLKERLGYDPS 1003
            +S VSPELLQ+RLKGYVKGV SEELL+HAEVV LS+ IKAGLSLEDHKSRLKERLG DPS
Sbjct: 181  KSAVSPELLQNRLKGYVKGVVSEELLSHAEVVRLSRIIKAGLSLEDHKSRLKERLGCDPS 240

Query: 1002 DEQLATSLKITRAELHSKLIECSLAREKLAMSNVRLVMSIAQKYDNMGAEMGDLVQGGLI 823
            DEQ+ATSLKI+RAEL SK I CSLAREKLAMSNVRLVMSIAQ+YDNMGAEM DLVQGGLI
Sbjct: 241  DEQVATSLKISRAELQSKSIACSLAREKLAMSNVRLVMSIAQRYDNMGAEMADLVQGGLI 300

Query: 822  GLLRGIEKFDSSKGFKISTYVYWWIRQGVSRALIENSRTLRLPTYLHERLSLIRNAKIRL 643
            GLLRGIEKFDSSKGF+ISTYVYWWIRQGVSRAL+ENSRTLRLP +LHERL LIRNAKIRL
Sbjct: 301  GLLRGIEKFDSSKGFRISTYVYWWIRQGVSRALVENSRTLRLPNHLHERLGLIRNAKIRL 360

Query: 642  EEKGITPSIDRIAECLNMSQKKVRNATEAISKVISLDKEAFPSLNGLPGETLHSYIADNR 463
            EEKG+TPSIDRIAE LN+SQKKVRNATEA+SKV SLD+EAFPSLNGLPGET HSYIADN 
Sbjct: 361  EEKGVTPSIDRIAESLNISQKKVRNATEAVSKVFSLDREAFPSLNGLPGETHHSYIADNC 420

Query: 462  LENNPWHGVDEWSLKDEVNNLISTTLGERERDIIRLYHGLDKECLTWEDISRRIGLSRER 283
            LENNPWHGVD+W+LKDEVN LI+ TL ERE++IIRLY+GLD E LTWEDIS+RIGLSRER
Sbjct: 421  LENNPWHGVDDWALKDEVNKLINLTLQEREQEIIRLYYGLDNESLTWEDISKRIGLSRER 480

Query: 282  VRQVGLVALEKLKHAARKRRLEAMLVKH 199
            VRQVGLVALEKLKHAARK++LEAMLVKH
Sbjct: 481  VRQVGLVALEKLKHAARKKKLEAMLVKH 508


>ref|XP_006484698.1| PREDICTED: RNA polymerase sigma factor sigA-like isoform X1 [Citrus
            sinensis] gi|568862456|ref|XP_006484699.1| PREDICTED: RNA
            polymerase sigma factor sigA-like isoform X2 [Citrus
            sinensis] gi|568862458|ref|XP_006484700.1| PREDICTED: RNA
            polymerase sigma factor sigA-like isoform X3 [Citrus
            sinensis]
          Length = 508

 Score =  706 bits (1821), Expect = 0.0
 Identities = 368/507 (72%), Positives = 409/507 (80%), Gaps = 1/507 (0%)
 Frame = -1

Query: 1716 MATAAVIGLSAGKRLLSSSSYYSDITDKLLPFHDYGLTQYQTSLAKNVTIAKKSSNFGLN 1537
            MATAAVIGLSAGKRLLSSS YYSDI++K    +D G    Q    KNV  AKKSSN+  +
Sbjct: 2    MATAAVIGLSAGKRLLSSSFYYSDISEKFSYINDLGSANSQVGSTKNVVAAKKSSNYNPS 61

Query: 1536 FPS-NRHTEHINALKEHVDASSTPATDAWLQRSNFIEEGSSDIESSVEVLLLLQKSMLEK 1360
            FPS NR T+ I ALKEHVD +     + W +  N IEE SS+++ SVE LLLLQKSMLEK
Sbjct: 62   FPSSNRQTQPIKALKEHVDTNFASTAEPWAEPPNSIEEESSELDYSVEALLLLQKSMLEK 121

Query: 1359 QWNLSFEQRRIMGVPGDERLKKFQVTXXXXXXXXXXXXXXXXSLDQNSIEVPPGRRKHFR 1180
            QWNLSFE+  +   P  +  KK  VT                 L QN         K  R
Sbjct: 122  QWNLSFERTVLTDSPSKKTHKKVPVTCSGVSARQRRLNSKKKILSQNKSVPQQNGSKQLR 181

Query: 1179 SIVSPELLQSRLKGYVKGVTSEELLTHAEVVHLSKKIKAGLSLEDHKSRLKERLGYDPSD 1000
            S++SPEL+Q+ LKGYVKGV SEELLTHAEVV LSKKIK GLSL+DHK RLKERLG +PS 
Sbjct: 182  SMISPELIQNHLKGYVKGVVSEELLTHAEVVRLSKKIKTGLSLDDHKLRLKERLGCEPSM 241

Query: 999  EQLATSLKITRAELHSKLIECSLAREKLAMSNVRLVMSIAQKYDNMGAEMGDLVQGGLIG 820
            EQLA SL+I+R EL S L+ECSLAREKL MSNVRLVMSIAQ+YDNMGA+M DLVQGGLIG
Sbjct: 242  EQLAASLRISRPELQSILMECSLAREKLVMSNVRLVMSIAQRYDNMGADMADLVQGGLIG 301

Query: 819  LLRGIEKFDSSKGFKISTYVYWWIRQGVSRALIENSRTLRLPTYLHERLSLIRNAKIRLE 640
            LLRGIEKFDSSKGFKISTYVYWWIRQGVSRAL+ENSRTLRLP +LHERL LIRNAK+RLE
Sbjct: 302  LLRGIEKFDSSKGFKISTYVYWWIRQGVSRALVENSRTLRLPNHLHERLGLIRNAKLRLE 361

Query: 639  EKGITPSIDRIAECLNMSQKKVRNATEAISKVISLDKEAFPSLNGLPGETLHSYIADNRL 460
            EKG+TPS+DRIAE LNMSQKKVRNATEAI KV SLD+EAFPSLNGLPGET HSYIADNR+
Sbjct: 362  EKGVTPSVDRIAEYLNMSQKKVRNATEAIGKVFSLDREAFPSLNGLPGETHHSYIADNRV 421

Query: 459  ENNPWHGVDEWSLKDEVNNLISTTLGERERDIIRLYHGLDKECLTWEDISRRIGLSRERV 280
            ENNPWHGVD+W+LKDEVN LI  TLGERER+IIRLY+GLDKECLTWEDIS+RIGLSRERV
Sbjct: 422  ENNPWHGVDDWALKDEVNKLIIVTLGEREREIIRLYYGLDKECLTWEDISKRIGLSRERV 481

Query: 279  RQVGLVALEKLKHAARKRRLEAMLVKH 199
            RQVGLVALEKLKHAARK+++EAMLVKH
Sbjct: 482  RQVGLVALEKLKHAARKKKMEAMLVKH 508


>ref|XP_006437403.1| hypothetical protein CICLE_v10031289mg [Citrus clementina]
            gi|557539599|gb|ESR50643.1| hypothetical protein
            CICLE_v10031289mg [Citrus clementina]
          Length = 508

 Score =  705 bits (1820), Expect = 0.0
 Identities = 366/507 (72%), Positives = 410/507 (80%), Gaps = 1/507 (0%)
 Frame = -1

Query: 1716 MATAAVIGLSAGKRLLSSSSYYSDITDKLLPFHDYGLTQYQTSLAKNVTIAKKSSNFGLN 1537
            MATAAVIGLSAGKRLLSSS YYSDI++K    +D G    Q    KNV  AKKSSN+  +
Sbjct: 2    MATAAVIGLSAGKRLLSSSFYYSDISEKFSYINDLGSANSQVGSTKNVVAAKKSSNYNPS 61

Query: 1536 FPS-NRHTEHINALKEHVDASSTPATDAWLQRSNFIEEGSSDIESSVEVLLLLQKSMLEK 1360
            FPS NR T+ I ALKEHVD +     + W +  N IEE SS+++ SVE LLLLQKSMLEK
Sbjct: 62   FPSSNRQTQPIKALKEHVDTNFASTAEPWAEPPNSIEEESSELDYSVEALLLLQKSMLEK 121

Query: 1359 QWNLSFEQRRIMGVPGDERLKKFQVTXXXXXXXXXXXXXXXXSLDQNSIEVPPGRRKHFR 1180
            QWNLSFE+  +   P  +  KK  VT                 L QN   +     K  R
Sbjct: 122  QWNLSFERTVLTDSPSKKTHKKVPVTCSGVSARQRRLNSKKKILSQNKSVLQQNGSKQLR 181

Query: 1179 SIVSPELLQSRLKGYVKGVTSEELLTHAEVVHLSKKIKAGLSLEDHKSRLKERLGYDPSD 1000
            S++SPEL+Q+ LKGYVKGV SEELLTHAEVV LSKKIK GLSL+DHK RLKERLG +PS 
Sbjct: 182  SMISPELIQNHLKGYVKGVVSEELLTHAEVVRLSKKIKTGLSLDDHKLRLKERLGCEPSM 241

Query: 999  EQLATSLKITRAELHSKLIECSLAREKLAMSNVRLVMSIAQKYDNMGAEMGDLVQGGLIG 820
            EQLA SL+I+R EL S L+ECSLAREKL MSNVRLVMSIAQ+YDNMGA+M DL+QGGLIG
Sbjct: 242  EQLAASLRISRPELQSILMECSLAREKLVMSNVRLVMSIAQRYDNMGADMADLIQGGLIG 301

Query: 819  LLRGIEKFDSSKGFKISTYVYWWIRQGVSRALIENSRTLRLPTYLHERLSLIRNAKIRLE 640
            LLRGIEKFDSSKGFKISTYVYWWIRQGVSRAL+ENSRTLRLP +LHERL LIRNAK+RLE
Sbjct: 302  LLRGIEKFDSSKGFKISTYVYWWIRQGVSRALVENSRTLRLPNHLHERLGLIRNAKLRLE 361

Query: 639  EKGITPSIDRIAECLNMSQKKVRNATEAISKVISLDKEAFPSLNGLPGETLHSYIADNRL 460
            EKG+TP++DRIAE LNMSQKKVRNATEAI KV SLD+EAFPSLNGLPGET HSYIADNR+
Sbjct: 362  EKGVTPAVDRIAEYLNMSQKKVRNATEAIGKVFSLDREAFPSLNGLPGETHHSYIADNRV 421

Query: 459  ENNPWHGVDEWSLKDEVNNLISTTLGERERDIIRLYHGLDKECLTWEDISRRIGLSRERV 280
            ENNPWHGVD+W+LKDEVN LI  TLGERER+IIRLY+GLDKECLTWEDIS+RIGLSRERV
Sbjct: 422  ENNPWHGVDDWALKDEVNKLIIVTLGEREREIIRLYYGLDKECLTWEDISKRIGLSRERV 481

Query: 279  RQVGLVALEKLKHAARKRRLEAMLVKH 199
            RQVGLVALEKLKHAARK+++EAMLVKH
Sbjct: 482  RQVGLVALEKLKHAARKKKMEAMLVKH 508


>ref|XP_007029766.1| Sigma factor A isoform 1 [Theobroma cacao]
            gi|508718371|gb|EOY10268.1| Sigma factor A isoform 1
            [Theobroma cacao]
          Length = 508

 Score =  700 bits (1807), Expect = 0.0
 Identities = 373/508 (73%), Positives = 419/508 (82%), Gaps = 2/508 (0%)
 Frame = -1

Query: 1716 MATAAVIGLSAGKRLLSSSSYYSDITDKLLPFHDYGLTQYQTSLAKNVTIAKKSSNFGLN 1537
            MATAAVIGL+ GKRLLSSS  YSDI +KL   +DYG + +QTS  K++ +AKKSSN   +
Sbjct: 2    MATAAVIGLTTGKRLLSSSFSYSDIIEKLSYANDYGSSHHQTSSTKSLIVAKKSSNCSQS 61

Query: 1536 FPS-NRHTEHINALKEHVDASSTPAT-DAWLQRSNFIEEGSSDIESSVEVLLLLQKSMLE 1363
             PS NR  + I ALKEHVD++S  +T +   Q SN +E  S D++ SVE LLLLQKSMLE
Sbjct: 62   LPSSNRRAQSIKALKEHVDSASIVSTAEPLFQGSNDLEVESYDLDYSVEALLLLQKSMLE 121

Query: 1362 KQWNLSFEQRRIMGVPGDERLKKFQVTXXXXXXXXXXXXXXXXSLDQNSIEVPPGRRKHF 1183
            KQW LSFE+      P  +  KK  VT                 L QN   + P   K  
Sbjct: 122  KQWTLSFERTVFTESPSRKIHKKIPVTCSGVSARQRRFNTKRKILIQNKSIIQPNA-KQL 180

Query: 1182 RSIVSPELLQSRLKGYVKGVTSEELLTHAEVVHLSKKIKAGLSLEDHKSRLKERLGYDPS 1003
            RS++SPELLQSRLKGYVKGV S+ELL+HAEVV LSKKIKAGLSLE+H+ RLKERLG +PS
Sbjct: 181  RSLISPELLQSRLKGYVKGVVSDELLSHAEVVRLSKKIKAGLSLEEHRLRLKERLGCEPS 240

Query: 1002 DEQLATSLKITRAELHSKLIECSLAREKLAMSNVRLVMSIAQKYDNMGAEMGDLVQGGLI 823
            DEQLATSLKI+RAEL SKLIECSLAREKLAMSNVRLVMSIAQ+YDNMGAEM DL+QGGLI
Sbjct: 241  DEQLATSLKISRAELRSKLIECSLAREKLAMSNVRLVMSIAQRYDNMGAEMSDLIQGGLI 300

Query: 822  GLLRGIEKFDSSKGFKISTYVYWWIRQGVSRALIENSRTLRLPTYLHERLSLIRNAKIRL 643
            GLLRGIEKFDSSKG+KISTYVYWWIRQGVSRAL+ENSRTLRLPT+LHERL LIRNAKIRL
Sbjct: 301  GLLRGIEKFDSSKGYKISTYVYWWIRQGVSRALVENSRTLRLPTHLHERLGLIRNAKIRL 360

Query: 642  EEKGITPSIDRIAECLNMSQKKVRNATEAISKVISLDKEAFPSLNGLPGETLHSYIADNR 463
            EEKGITP+IDRIAE LNMSQKKVRNATEA+SKV SLD++AFPSLNGLPGET HSYIADN 
Sbjct: 361  EEKGITPTIDRIAESLNMSQKKVRNATEAVSKVFSLDRDAFPSLNGLPGETHHSYIADNH 420

Query: 462  LENNPWHGVDEWSLKDEVNNLISTTLGERERDIIRLYHGLDKECLTWEDISRRIGLSRER 283
            +EN PWHGVDEW+LKDEVN LI+ TLGERER+IIRLY+GLDKE LTWEDIS+RIGLSRER
Sbjct: 421  VENIPWHGVDEWALKDEVNRLITITLGEREREIIRLYYGLDKESLTWEDISKRIGLSRER 480

Query: 282  VRQVGLVALEKLKHAARKRRLEAMLVKH 199
            VRQVGLVALEKLKHAARK+++EAMLVKH
Sbjct: 481  VRQVGLVALEKLKHAARKKKMEAMLVKH 508


>ref|XP_002325882.1| RNA POLYMERASE SIGMA SUBUNIT 1 family protein [Populus trichocarpa]
            gi|222862757|gb|EEF00264.1| RNA POLYMERASE SIGMA SUBUNIT
            1 family protein [Populus trichocarpa]
          Length = 509

 Score =  699 bits (1805), Expect = 0.0
 Identities = 366/508 (72%), Positives = 416/508 (81%), Gaps = 2/508 (0%)
 Frame = -1

Query: 1716 MATAAVIGLSAGKRLLSSSSYYSDITDKLLPFHDYGLTQYQTSLAKNVTIAKKSSNFGLN 1537
            MATAAVIGLS+GKRLLSSS YYSD+T+KL   +D+G+T Y T+  KNV +AKKSSN+G +
Sbjct: 2    MATAAVIGLSSGKRLLSSSFYYSDLTEKLSNVNDHGITYYPTATTKNVIVAKKSSNYGPS 61

Query: 1536 FPS-NRHTEHINALKEHVDASSTPATDA-WLQRSNFIEEGSSDIESSVEVLLLLQKSMLE 1363
            FPS NR++  I ALKEHVD +S  +  A W +  +  EE SS ++ SVE LLLLQKSMLE
Sbjct: 62   FPSSNRNSHSIKALKEHVDTASASSNVATWFKTFDDFEEESSALDYSVEALLLLQKSMLE 121

Query: 1362 KQWNLSFEQRRIMGVPGDERLKKFQVTXXXXXXXXXXXXXXXXSLDQNSIEVPPGRRKHF 1183
            KQWNLSFE+         +  KK  VT                + +Q+         K  
Sbjct: 122  KQWNLSFERTNSSDSTSKKNNKKIPVTCSGVSARQRRVNNRRKNQNQSKFMSQSSDFKFL 181

Query: 1182 RSIVSPELLQSRLKGYVKGVTSEELLTHAEVVHLSKKIKAGLSLEDHKSRLKERLGYDPS 1003
            RS+ SP+LLQ+RLKGYVKGV S+E+L H EVV LS+ I+AGLS EDHKSRLKERLG +PS
Sbjct: 182  RSVSSPDLLQNRLKGYVKGVVSDEVLPHTEVVRLSRIIRAGLSFEDHKSRLKERLGCEPS 241

Query: 1002 DEQLATSLKITRAELHSKLIECSLAREKLAMSNVRLVMSIAQKYDNMGAEMGDLVQGGLI 823
            DEQ+A SL+I+RA+L SKLI+CSLAREKLAMSNVRLVMSIAQKYDNMGAEM DLVQGGLI
Sbjct: 242  DEQIADSLRISRADLQSKLIQCSLAREKLAMSNVRLVMSIAQKYDNMGAEMADLVQGGLI 301

Query: 822  GLLRGIEKFDSSKGFKISTYVYWWIRQGVSRALIENSRTLRLPTYLHERLSLIRNAKIRL 643
            GLLRGIEKFDSSKGFKISTYVYWWIRQGVSRAL++NSRTLRLP +LHERL LIRNAKIRL
Sbjct: 302  GLLRGIEKFDSSKGFKISTYVYWWIRQGVSRALVDNSRTLRLPNHLHERLGLIRNAKIRL 361

Query: 642  EEKGITPSIDRIAECLNMSQKKVRNATEAISKVISLDKEAFPSLNGLPGETLHSYIADNR 463
            EEKG+TPSIDRIAE LNMSQ+KVRNATEAISKV SLD+EAFPSLNGLPGET HSYIADNR
Sbjct: 362  EEKGVTPSIDRIAESLNMSQRKVRNATEAISKVFSLDREAFPSLNGLPGETHHSYIADNR 421

Query: 462  LENNPWHGVDEWSLKDEVNNLISTTLGERERDIIRLYHGLDKECLTWEDISRRIGLSRER 283
             ENNPWHGVDEW+LK+EVN LI +TL ERE++IIRLYHGLD+ECLTWEDIS+R+GLSRER
Sbjct: 422  PENNPWHGVDEWALKEEVNKLIDSTLQEREKEIIRLYHGLDQECLTWEDISKRMGLSRER 481

Query: 282  VRQVGLVALEKLKHAARKRRLEAMLVKH 199
            VRQVGLVALEKLKHAARKR  EAMLVKH
Sbjct: 482  VRQVGLVALEKLKHAARKRNTEAMLVKH 509


>ref|XP_007219023.1| hypothetical protein PRUPE_ppa004393mg [Prunus persica]
            gi|462415485|gb|EMJ20222.1| hypothetical protein
            PRUPE_ppa004393mg [Prunus persica]
          Length = 512

 Score =  688 bits (1776), Expect = 0.0
 Identities = 366/511 (71%), Positives = 412/511 (80%), Gaps = 5/511 (0%)
 Frame = -1

Query: 1716 MATAAVIGLSAGKRLLSSSSYYSDITDKLLPFHDY-GLTQYQTSLAKNVTIAKKSSNFGL 1540
            MATAAVIGLS GKRLL+SS YYSDIT+KL   +D+ G      S  KNV  A+K SN   
Sbjct: 2    MATAAVIGLSTGKRLLNSSFYYSDITEKLFHLNDHHGFLHCHFSSTKNVVTARKPSNCSS 61

Query: 1539 NFPS-NRHTEHINALKEHVDASSTP--ATDAWLQRSNFIEEGSSDIESSVEVLLLLQKSM 1369
             FPS NR  + I ALKEHV  +S P  AT  W Q  N +EE SSD+E SVE LLLLQKSM
Sbjct: 62   RFPSSNRPQQSIRALKEHVQTASAPSSATQQWFQELNDLEEESSDLEYSVEALLLLQKSM 121

Query: 1368 LEKQWNLSFEQRRIMGVPGDERLKKFQVTXXXXXXXXXXXXXXXXS-LDQNSIEVPPGRR 1192
            LEKQWNLSFE++ +         KK  VT                   ++++  + P   
Sbjct: 122  LEKQWNLSFEKKVLRDSTSKTTDKKIPVTCSGVSARQRRMTSTKRKTFNKSTCVMHPSTN 181

Query: 1191 KHFRSIVSPELLQSRLKGYVKGVTSEELLTHAEVVHLSKKIKAGLSLEDHKSRLKERLGY 1012
            K  R+IVSPELLQ+ +KGYVKGV SE+LLTH EVV LSKKIK GLS+E+HKSRLKERLG 
Sbjct: 182  KPLRAIVSPELLQNHVKGYVKGVLSEDLLTHTEVVRLSKKIKVGLSVEEHKSRLKERLGC 241

Query: 1011 DPSDEQLATSLKITRAELHSKLIECSLAREKLAMSNVRLVMSIAQKYDNMGAEMGDLVQG 832
            +PSDEQLATSL+I+RA+L SKLIEC LAREKLAMSNVRLVMSIAQ+YDNMGAEM DL+QG
Sbjct: 242  EPSDEQLATSLRISRAQLQSKLIECKLAREKLAMSNVRLVMSIAQRYDNMGAEMADLIQG 301

Query: 831  GLIGLLRGIEKFDSSKGFKISTYVYWWIRQGVSRALIENSRTLRLPTYLHERLSLIRNAK 652
            GLIGLLRGIEKFDSSKGFKISTYVYWWIRQGVSRAL+ENSRTLRLPT+LHERL LIRNAK
Sbjct: 302  GLIGLLRGIEKFDSSKGFKISTYVYWWIRQGVSRALVENSRTLRLPTHLHERLGLIRNAK 361

Query: 651  IRLEEKGITPSIDRIAECLNMSQKKVRNATEAISKVISLDKEAFPSLNGLPGETLHSYIA 472
            IRLEEKGITPSIDRIAE LNMS+KKVRNATEAISKV SLD++AFPSLNGLPGET HSYIA
Sbjct: 362  IRLEEKGITPSIDRIAESLNMSKKKVRNATEAISKVFSLDRDAFPSLNGLPGETHHSYIA 421

Query: 471  DNRLENNPWHGVDEWSLKDEVNNLISTTLGERERDIIRLYHGLDKECLTWEDISRRIGLS 292
            DNRLEN PWHGVD W+LK+EV+ LI+  LGERE++II+LY+GL+ ECLTWEDIS+RIGLS
Sbjct: 422  DNRLENIPWHGVDAWALKEEVSKLINMMLGEREKEIIQLYYGLENECLTWEDISKRIGLS 481

Query: 291  RERVRQVGLVALEKLKHAARKRRLEAMLVKH 199
            RERVRQVGLVALEKLKHAARKR +EAML+KH
Sbjct: 482  RERVRQVGLVALEKLKHAARKREMEAMLLKH 512


>dbj|BAA88921.1| sigma factor [Nicotiana tabacum]
          Length = 508

 Score =  676 bits (1744), Expect = 0.0
 Identities = 352/506 (69%), Positives = 406/506 (80%), Gaps = 1/506 (0%)
 Frame = -1

Query: 1716 MATAAVIGLSAGKRLLSSSSYYSDITDKLLPFHDYGLTQYQTSLAKNVTIAKKSSNFGLN 1537
            M+TAAVIGLSAGKRLLSSS YYSD+ +KL    D+ L  +     KNV  AKKSS++  +
Sbjct: 2    MSTAAVIGLSAGKRLLSSSFYYSDLNEKLTCTSDHSLPCHHVPSIKNVITAKKSSDYSPS 61

Query: 1536 FPSNRHTEHINALKEHVDASSTPA-TDAWLQRSNFIEEGSSDIESSVEVLLLLQKSMLEK 1360
              S+R ++   +LKEHVD ++ P+   +W +    ++  S D + SVEVLLLLQKSMLEK
Sbjct: 62   CVSSRKSQSAKSLKEHVDITADPSDVPSWFEMYEQLQNESDDEDESVEVLLLLQKSMLEK 121

Query: 1359 QWNLSFEQRRIMGVPGDERLKKFQVTXXXXXXXXXXXXXXXXSLDQNSIEVPPGRRKHFR 1180
            QWNLS EQ        +++ KK  +T                 LD++S   P    K  R
Sbjct: 122  QWNLSLEQTLTASPQHEKKSKKMHITCSGTSARRRRMDSRQRVLDRHSSATPTSAAKPLR 181

Query: 1179 SIVSPELLQSRLKGYVKGVTSEELLTHAEVVHLSKKIKAGLSLEDHKSRLKERLGYDPSD 1000
            SI+ PELLQ+RLKGYVKGV SEELLTHAEV+ LSKKI+ GL LE+ KSRLKERLG +PSD
Sbjct: 182  SIIGPELLQNRLKGYVKGVVSEELLTHAEVLQLSKKIQVGLYLEEQKSRLKERLGCEPSD 241

Query: 999  EQLATSLKITRAELHSKLIECSLAREKLAMSNVRLVMSIAQKYDNMGAEMGDLVQGGLIG 820
            +QLA SLK++R +L S LIECSLARE+LAMSNVRLVMSIAQ+YDN+GAEM DLVQGGLIG
Sbjct: 242  DQLAVSLKMSRTDLQSTLIECSLARERLAMSNVRLVMSIAQRYDNVGAEMADLVQGGLIG 301

Query: 819  LLRGIEKFDSSKGFKISTYVYWWIRQGVSRALIENSRTLRLPTYLHERLSLIRNAKIRLE 640
            LLRGIEKFD SKG+KISTYVYWWIRQGVSRAL+ENSRTLRLPTYLHERLSLIRNAK RLE
Sbjct: 302  LLRGIEKFDPSKGYKISTYVYWWIRQGVSRALVENSRTLRLPTYLHERLSLIRNAKARLE 361

Query: 639  EKGITPSIDRIAECLNMSQKKVRNATEAISKVISLDKEAFPSLNGLPGETLHSYIADNRL 460
            EKGITPS++ IA  LNMSQKKVRNATEA SK+ SLD+EAFPSLNGLPGETLHSYIADN L
Sbjct: 362  EKGITPSVNNIAASLNMSQKKVRNATEASSKMYSLDREAFPSLNGLPGETLHSYIADNHL 421

Query: 459  ENNPWHGVDEWSLKDEVNNLISTTLGERERDIIRLYHGLDKECLTWEDISRRIGLSRERV 280
            ENNPWHGVD W+LKDEVNNLIS+TL +RER+IIRLY+GLD ECLTWEDIS+RIGLSRERV
Sbjct: 422  ENNPWHGVDVWALKDEVNNLISSTLRDREREIIRLYYGLDNECLTWEDISKRIGLSRERV 481

Query: 279  RQVGLVALEKLKHAARKRRLEAMLVK 202
            RQVGLVALEKLKHAARKR+L+AML+K
Sbjct: 482  RQVGLVALEKLKHAARKRQLDAMLIK 507


>ref|XP_003539986.1| PREDICTED: RNA polymerase sigma factor sigA-like [Glycine max]
          Length = 503

 Score =  670 bits (1729), Expect = 0.0
 Identities = 360/510 (70%), Positives = 414/510 (81%), Gaps = 4/510 (0%)
 Frame = -1

Query: 1716 MATAAVIGLSAGKRLLSSSSYYSDITDKLLPFHDYGLTQYQTSLAKNVTIAKKSSNFGLN 1537
            MATAAVIGLS GKRLLSSS +YSDI +KL    D+G T YQ    K++ +AKKSSN+   
Sbjct: 1    MATAAVIGLSGGKRLLSSSYHYSDIIEKLSYGSDFGSTHYQIVPTKSLIVAKKSSNYTPT 60

Query: 1536 FP-SNRHTEHINALKEHVDASSTPATDAWLQ--RSNFIEEGSSDIESSVEVLLLLQKSML 1366
            FP SN+  + I ALKEHVD + T A D W Q   SN +E  SS++  SVE LLLLQKSML
Sbjct: 61   FPASNQQNQSIKALKEHVDDAPTIA-DPWFQSYNSNDLEVESSEMGYSVEALLLLQKSML 119

Query: 1365 EKQWNLSFEQRRIM-GVPGDERLKKFQVTXXXXXXXXXXXXXXXXSLDQNSIEVPPGRRK 1189
            EKQWNLSFE+  +       ++ +K  VT                   +    +      
Sbjct: 120  EKQWNLSFEREVLTENSSKGKKCRKVAVTCSGVSARQRRMNT------KRKTAIKTCGAM 173

Query: 1188 HFRSIVSPELLQSRLKGYVKGVTSEELLTHAEVVHLSKKIKAGLSLEDHKSRLKERLGYD 1009
              +S +SPELLQ RLKGYVKG+ SEELL+HAEVV+LS+KIK GLSLE+HKSRLKE+LG +
Sbjct: 174  QLKSKISPELLQHRLKGYVKGLVSEELLSHAEVVNLSEKIKVGLSLEEHKSRLKEKLGCE 233

Query: 1008 PSDEQLATSLKITRAELHSKLIECSLAREKLAMSNVRLVMSIAQKYDNMGAEMGDLVQGG 829
            PSD+Q+ATSLKI+R EL +++IECSLAREKLAMSNVRLVMSIAQKYDN+GAEMGDLVQGG
Sbjct: 234  PSDDQMATSLKISRTELRARMIECSLAREKLAMSNVRLVMSIAQKYDNLGAEMGDLVQGG 293

Query: 828  LIGLLRGIEKFDSSKGFKISTYVYWWIRQGVSRALIENSRTLRLPTYLHERLSLIRNAKI 649
            LIGLLRGIEKFDSSKGFKISTYVYWWIRQGVSRAL+ENSRTLRLP +LHERLSLIRNAK 
Sbjct: 294  LIGLLRGIEKFDSSKGFKISTYVYWWIRQGVSRALVENSRTLRLPAHLHERLSLIRNAKF 353

Query: 648  RLEEKGITPSIDRIAECLNMSQKKVRNATEAISKVISLDKEAFPSLNGLPGETLHSYIAD 469
            RLEE+GITP+IDRIA+ LNMSQKKVRNATEAISK+ISLD+EAFPSLNGL GET HSYIAD
Sbjct: 354  RLEERGITPTIDRIAKYLNMSQKKVRNATEAISKIISLDREAFPSLNGLQGETHHSYIAD 413

Query: 468  NRLENNPWHGVDEWSLKDEVNNLISTTLGERERDIIRLYHGLDKECLTWEDISRRIGLSR 289
            NR+EN PW+GVDEW+LKDEVN LI+ TL ERER+IIRLY+GL+KECLTWEDIS+RIGLSR
Sbjct: 414  NRVENIPWNGVDEWALKDEVNRLINVTLVEREREIIRLYYGLEKECLTWEDISKRIGLSR 473

Query: 288  ERVRQVGLVALEKLKHAARKRRLEAMLVKH 199
            ERVRQVGLVALEKLKHAARKR++EAML+KH
Sbjct: 474  ERVRQVGLVALEKLKHAARKRQMEAMLLKH 503


>ref|XP_004151855.1| PREDICTED: RNA polymerase sigma factor sigA-like [Cucumis sativus]
            gi|449514942|ref|XP_004164521.1| PREDICTED: RNA
            polymerase sigma factor sigA-like [Cucumis sativus]
          Length = 508

 Score =  669 bits (1727), Expect = 0.0
 Identities = 349/508 (68%), Positives = 412/508 (81%), Gaps = 2/508 (0%)
 Frame = -1

Query: 1716 MATAAVIGLSAGKRLLSSSSYYSDITDKLLPFHDYGLTQYQTSLAKNVTIAKKSSNFGLN 1537
            MATAA+IGL A KRLL+SSSYYSD T+K+L  +DY L Q Q S +K+V IAK S+NF   
Sbjct: 2    MATAAIIGLGAAKRLLNSSSYYSDFTEKILYANDYRLGQTQVSSSKSVVIAKSSANFSPR 61

Query: 1536 FPS-NRHTEH-INALKEHVDASSTPATDAWLQRSNFIEEGSSDIESSVEVLLLLQKSMLE 1363
            +PS NRH++  I A+KEHV+  S+P  + W   +++ E+  ++++ +VE LLLLQKSMLE
Sbjct: 62   YPSSNRHSQQCIKAVKEHVETPSSPIAEPWHNTTSW-EDEETELKYTVEALLLLQKSMLE 120

Query: 1362 KQWNLSFEQRRIMGVPGDERLKKFQVTXXXXXXXXXXXXXXXXSLDQNSIEVPPGRRKHF 1183
            KQW+LSFEQ      P ++ LKK  VT                   ++     P   K  
Sbjct: 121  KQWSLSFEQTVSTDTPKEKTLKKVPVTCSGVSARQRRMSSKRKIQSKHVFMAQPKISKQL 180

Query: 1182 RSIVSPELLQSRLKGYVKGVTSEELLTHAEVVHLSKKIKAGLSLEDHKSRLKERLGYDPS 1003
            R  +SPELLQ+RLKGYVKG+ SEELL+HAEVV LSKKIK GL+LE+ K+RLK+RLG +PS
Sbjct: 181  RPTISPELLQNRLKGYVKGLLSEELLSHAEVVRLSKKIKVGLTLEERKTRLKQRLGCEPS 240

Query: 1002 DEQLATSLKITRAELHSKLIECSLAREKLAMSNVRLVMSIAQKYDNMGAEMGDLVQGGLI 823
            ++QLA SLKI+RAEL S+++E SLAREKLAMSNVRLVMSIAQ+YDNMGAEM DLVQGGLI
Sbjct: 241  EDQLAISLKISRAELRSRMMESSLAREKLAMSNVRLVMSIAQRYDNMGAEMADLVQGGLI 300

Query: 822  GLLRGIEKFDSSKGFKISTYVYWWIRQGVSRALIENSRTLRLPTYLHERLSLIRNAKIRL 643
            GLLRGIEKFDSSKGFKISTYVYWWIRQGVSRAL+ENSRTLRLPT+LHERL LIRNAK++L
Sbjct: 301  GLLRGIEKFDSSKGFKISTYVYWWIRQGVSRALVENSRTLRLPTHLHERLGLIRNAKVKL 360

Query: 642  EEKGITPSIDRIAECLNMSQKKVRNATEAISKVISLDKEAFPSLNGLPGETLHSYIADNR 463
            +EKGITPS+DRIAE LNMS+KKV+NATEAISKV SLD+EAFPSLNGLPGET HSYIADN 
Sbjct: 361  QEKGITPSLDRIAESLNMSKKKVQNATEAISKVFSLDREAFPSLNGLPGETHHSYIADNC 420

Query: 462  LENNPWHGVDEWSLKDEVNNLISTTLGERERDIIRLYHGLDKECLTWEDISRRIGLSRER 283
            LENNPWHG D W LK EVN LI+ TLG+RER+IIRLYHGLD ECLTWE+IS+RIGLSRER
Sbjct: 421  LENNPWHGTDTWILKVEVNQLINMTLGDREREIIRLYHGLDNECLTWEEISKRIGLSRER 480

Query: 282  VRQVGLVALEKLKHAARKRRLEAMLVKH 199
            VRQVGLVALEKLK AA+ R++EAML+KH
Sbjct: 481  VRQVGLVALEKLKKAAKTRKMEAMLLKH 508


>ref|XP_006878659.1| hypothetical protein AMTR_s00011p00266100 [Amborella trichopoda]
            gi|548832002|gb|ERM94804.1| hypothetical protein
            AMTR_s00011p00266100 [Amborella trichopoda]
          Length = 497

 Score =  667 bits (1720), Expect = 0.0
 Identities = 350/506 (69%), Positives = 411/506 (81%)
 Frame = -1

Query: 1716 MATAAVIGLSAGKRLLSSSSYYSDITDKLLPFHDYGLTQYQTSLAKNVTIAKKSSNFGLN 1537
            MATAAVIG+S GKRLL SS   SDI ++++P +D+G TQ+     K+  ++KKS  FG N
Sbjct: 1    MATAAVIGISTGKRLLRSSFLASDI-ERVIPIYDFGATQFPAVSHKSFIVSKKSPGFGPN 59

Query: 1536 FPSNRHTEHINALKEHVDASSTPATDAWLQRSNFIEEGSSDIESSVEVLLLLQKSMLEKQ 1357
             PSNR T++INA+KEHV+A S+ +       S+   E + D ESS+E L+LLQKSMLEKQ
Sbjct: 60   SPSNRQTQYINAIKEHVNAPSSSS-------SSSTTEANPDFESSLEALILLQKSMLEKQ 112

Query: 1356 WNLSFEQRRIMGVPGDERLKKFQVTXXXXXXXXXXXXXXXXSLDQNSIEVPPGRRKHFRS 1177
            WNLSF+Q        +E  KK  V                  L+Q +  V   R+K    
Sbjct: 113  WNLSFDQAGTSTDLCEESCKKLGVISSGASARQRRNSLRRP-LNQRAGTVLVRRKKQATP 171

Query: 1176 IVSPELLQSRLKGYVKGVTSEELLTHAEVVHLSKKIKAGLSLEDHKSRLKERLGYDPSDE 997
            IVSPELLQ   +GYVKG++++ LL+HAEVVHLS KI+AGLSLE+HKSRLKE+LG+DPSDE
Sbjct: 172  IVSPELLQGHFRGYVKGISNDSLLSHAEVVHLSWKIRAGLSLEEHKSRLKEKLGFDPSDE 231

Query: 996  QLATSLKITRAELHSKLIECSLAREKLAMSNVRLVMSIAQKYDNMGAEMGDLVQGGLIGL 817
             LA+SLKI+R+ELHSKLIECSLA+EKLAMSN+RLVMSIAQKYDNMG EM DL+QGGLIGL
Sbjct: 232  LLASSLKISRSELHSKLIECSLAKEKLAMSNIRLVMSIAQKYDNMGIEMADLIQGGLIGL 291

Query: 816  LRGIEKFDSSKGFKISTYVYWWIRQGVSRALIENSRTLRLPTYLHERLSLIRNAKIRLEE 637
            LRGIEKFDSSKGFKISTYVYWWIRQGVSRA++ENSRTLRLPT+LHERLSLIRNAKIRL+E
Sbjct: 292  LRGIEKFDSSKGFKISTYVYWWIRQGVSRAMVENSRTLRLPTHLHERLSLIRNAKIRLKE 351

Query: 636  KGITPSIDRIAECLNMSQKKVRNATEAISKVISLDKEAFPSLNGLPGETLHSYIADNRLE 457
            +G+TPSI RIA+ LNMS+KKV+NATEA++KV SLD+EAFP+LNGLPGETLHSYIADN L 
Sbjct: 352  QGLTPSIHRIAKSLNMSKKKVKNATEAMTKVFSLDREAFPTLNGLPGETLHSYIADNNLM 411

Query: 456  NNPWHGVDEWSLKDEVNNLISTTLGERERDIIRLYHGLDKECLTWEDISRRIGLSRERVR 277
            NNPWHGVDEW LK EVN LIS+TL ERE+DIIRLY+GLDKEC TWEDISR+IGLSRERVR
Sbjct: 412  NNPWHGVDEWLLKAEVNKLISSTLAEREQDIIRLYYGLDKECHTWEDISRKIGLSRERVR 471

Query: 276  QVGLVALEKLKHAARKRRLEAMLVKH 199
            QVGLVALEKLK+AAR +RLEAMLVKH
Sbjct: 472  QVGLVALEKLKNAARNKRLEAMLVKH 497


>ref|XP_002319237.2| hypothetical protein POPTR_0013s07290g [Populus trichocarpa]
            gi|550325184|gb|EEE95160.2| hypothetical protein
            POPTR_0013s07290g [Populus trichocarpa]
          Length = 499

 Score =  665 bits (1715), Expect = 0.0
 Identities = 354/508 (69%), Positives = 405/508 (79%), Gaps = 2/508 (0%)
 Frame = -1

Query: 1716 MATAAVIGLSAGKRLLSSSSYYSDITDKLLPFHDYGLTQYQTSLAKNVTIAKKSSNFGLN 1537
            MATA+ IGL+ GKRLLSSS Y+SD+T+KL   +D+G+  YQ +  K+V +AKKSS +G +
Sbjct: 2    MATASFIGLTTGKRLLSSSFYFSDLTEKLSNVNDHGVAHYQITTTKSVIVAKKSSKYGPS 61

Query: 1536 FPSNRHTEHIN-ALKEHVDASSTPATDA-WLQRSNFIEEGSSDIESSVEVLLLLQKSMLE 1363
            FPS+    H N ALKE +D +S  +T A W +  +  EE SS ++ SVE L+LLQKSMLE
Sbjct: 62   FPSSYRNPHSNKALKELIDTASASSTVATWFKTLDDFEEESSVLDYSVEALILLQKSMLE 121

Query: 1362 KQWNLSFEQRRIMGVPGDERLKKFQVTXXXXXXXXXXXXXXXXSLDQNSIEVPPGRRKHF 1183
            KQWNLSFE          +  KK  VT                + +Q+           F
Sbjct: 122  KQWNLSFESINSSDSKIKKSNKKIPVTCSGVSARQRRLNNKRKNQNQSK----------F 171

Query: 1182 RSIVSPELLQSRLKGYVKGVTSEELLTHAEVVHLSKKIKAGLSLEDHKSRLKERLGYDPS 1003
             S +SP+LL +RLKGYVKGV S+E+L H EVV LS+ I+AGLSLEDHKS LKERLG +PS
Sbjct: 172  MSDISPDLLLNRLKGYVKGVVSDEVLPHTEVVRLSRIIRAGLSLEDHKSSLKERLGCEPS 231

Query: 1002 DEQLATSLKITRAELHSKLIECSLAREKLAMSNVRLVMSIAQKYDNMGAEMGDLVQGGLI 823
            DEQLA SL+I+RA+L S+LI+CSLAREKLAMSNVRLVMSIAQK DNMGAEM DLVQ GLI
Sbjct: 232  DEQLADSLRISRADLQSQLIQCSLAREKLAMSNVRLVMSIAQKNDNMGAEMADLVQAGLI 291

Query: 822  GLLRGIEKFDSSKGFKISTYVYWWIRQGVSRALIENSRTLRLPTYLHERLSLIRNAKIRL 643
            GLLRGIEKFDSSKGFKISTYVYWWIRQGVSRAL+EN RTLRLP +LHERL LIRNAKIRL
Sbjct: 292  GLLRGIEKFDSSKGFKISTYVYWWIRQGVSRALVENPRTLRLPNHLHERLGLIRNAKIRL 351

Query: 642  EEKGITPSIDRIAECLNMSQKKVRNATEAISKVISLDKEAFPSLNGLPGETLHSYIADNR 463
            EEKG+TPSIDRIAE LNMSQ+KVRNATEAISKV SLD+EAFPSLNGLPGET HSYIADNR
Sbjct: 352  EEKGVTPSIDRIAESLNMSQRKVRNATEAISKVFSLDREAFPSLNGLPGETHHSYIADNR 411

Query: 462  LENNPWHGVDEWSLKDEVNNLISTTLGERERDIIRLYHGLDKECLTWEDISRRIGLSRER 283
            LENNPWHGVDEW+LK+EVN LI + L ERER+IIRLYHGLDKECLTWEDIS+R+GLSRER
Sbjct: 412  LENNPWHGVDEWALKEEVNKLIDSALQEREREIIRLYHGLDKECLTWEDISKRMGLSRER 471

Query: 282  VRQVGLVALEKLKHAARKRRLEAMLVKH 199
            VRQVGLVALEKLKHAARK +LEAMLVKH
Sbjct: 472  VRQVGLVALEKLKHAARKGKLEAMLVKH 499


>ref|XP_004235299.1| PREDICTED: RNA polymerase sigma factor sigA-like [Solanum
            lycopersicum]
          Length = 509

 Score =  664 bits (1712), Expect = 0.0
 Identities = 349/507 (68%), Positives = 397/507 (78%), Gaps = 2/507 (0%)
 Frame = -1

Query: 1716 MATAAVIGLSAGKRLLSSSSYYSDITDKLLPFHDYGLTQYQTSLAKNVTIAKKSSNFGLN 1537
            MAT AVIGLSAGKRLLSSS YYSD+ +KL    D+ L  +Q    KNV  AKKSS++  +
Sbjct: 2    MATTAVIGLSAGKRLLSSSFYYSDLNEKLSCSSDHSLPCHQVPTVKNVISAKKSSDYSPS 61

Query: 1536 FPSNRHTEHINALKEHVDASSTPA-TDAWLQRSNFIEEGSSDIES-SVEVLLLLQKSMLE 1363
              S+R  + + ALKEHVD +S P+   +W +R   ++  S D E  SVEVLLLLQKSMLE
Sbjct: 62   CVSSRKLQSVKALKEHVDIASDPSDVQSWFERFEQLQNESDDEEDDSVEVLLLLQKSMLE 121

Query: 1362 KQWNLSFEQRRIMGVPGDERLKKFQVTXXXXXXXXXXXXXXXXSLDQNSIEVPPGRRKHF 1183
            KQWNLS E+         +  KK  +                  L Q S   P    K  
Sbjct: 122  KQWNLSAEETLTASTQRKKNCKKMHIACSGTSARRRRMDSRQRVLAQKSSATPISATKPL 181

Query: 1182 RSIVSPELLQSRLKGYVKGVTSEELLTHAEVVHLSKKIKAGLSLEDHKSRLKERLGYDPS 1003
            RSI+ P+LLQ+RLKGYVKG+ SEELLTH EV+ LSKKIK GL +E+ KSRLKERLG +PS
Sbjct: 182  RSILGPDLLQNRLKGYVKGIVSEELLTHTEVLQLSKKIKVGLHVEEQKSRLKERLGCEPS 241

Query: 1002 DEQLATSLKITRAELHSKLIECSLAREKLAMSNVRLVMSIAQKYDNMGAEMGDLVQGGLI 823
            D+QLA SLK++R +L S LIECSLARE+L+MSNVRLVMSIAQ+YDNMGAEM DLVQGGLI
Sbjct: 242  DDQLAVSLKMSRTDLQSTLIECSLARERLSMSNVRLVMSIAQRYDNMGAEMADLVQGGLI 301

Query: 822  GLLRGIEKFDSSKGFKISTYVYWWIRQGVSRALIENSRTLRLPTYLHERLSLIRNAKIRL 643
            GLLRGIEKFD SKG+KISTYVYWWIRQGVSR L+ENSRTLRLPT+LHERL LIRNAK+RL
Sbjct: 302  GLLRGIEKFDPSKGYKISTYVYWWIRQGVSRTLVENSRTLRLPTHLHERLGLIRNAKMRL 361

Query: 642  EEKGITPSIDRIAECLNMSQKKVRNATEAISKVISLDKEAFPSLNGLPGETLHSYIADNR 463
            EEKGI PS++ IA  LNMSQKKVRNATEA SKV SLD+E FPSLNGLPG TLHSYIADN 
Sbjct: 362  EEKGINPSVNNIAASLNMSQKKVRNATEASSKVYSLDREVFPSLNGLPGTTLHSYIADNH 421

Query: 462  LENNPWHGVDEWSLKDEVNNLISTTLGERERDIIRLYHGLDKECLTWEDISRRIGLSRER 283
            LENNPWHGVD W+LKDEVNNLIS+TL ERER+IIRLY+GLD ECLTWEDIS+RIGLSRER
Sbjct: 422  LENNPWHGVDVWALKDEVNNLISSTLREREREIIRLYYGLDSECLTWEDISKRIGLSRER 481

Query: 282  VRQVGLVALEKLKHAARKRRLEAMLVK 202
            VRQVGLVALEKLKHAARKRRL+AML+K
Sbjct: 482  VRQVGLVALEKLKHAARKRRLDAMLIK 508


>ref|XP_003534364.1| PREDICTED: RNA polymerase sigma factor sigA-like isoform X1 [Glycine
            max] gi|571478813|ref|XP_006587676.1| PREDICTED: RNA
            polymerase sigma factor sigA-like isoform X2 [Glycine
            max]
          Length = 503

 Score =  660 bits (1703), Expect = 0.0
 Identities = 356/510 (69%), Positives = 411/510 (80%), Gaps = 4/510 (0%)
 Frame = -1

Query: 1716 MATAAVIGLSAGKRLLSSSSYYSDITDKLLPFHDYGLTQYQTSLAKNVTIAKKSSNFGLN 1537
            MATAAVIGLS GKRLLSSS +YSD+ +KL    D+G T YQ    K++  AKKSSN+   
Sbjct: 1    MATAAVIGLSGGKRLLSSSYHYSDVIEKLSYGSDFGSTHYQIVPTKSLIAAKKSSNYTPT 60

Query: 1536 FP-SNRHTEHINALKEHVDASSTPATDAWLQ--RSNFIEEGSSDIESSVEVLLLLQKSML 1366
            FP SN+  + I ALKEHVD + T A D+W Q   SN +E  SS++  SVE LLLLQKSML
Sbjct: 61   FPASNQQNQSIKALKEHVDDAPTIA-DSWFQSCNSNDLEVESSEMGYSVEALLLLQKSML 119

Query: 1365 EKQWNLSFEQRRIMGVPGD-ERLKKFQVTXXXXXXXXXXXXXXXXSLDQNSIEVPPGRRK 1189
            EKQWNLSFE+  +       ++ KK  VT                   +    +      
Sbjct: 120  EKQWNLSFEREVLTEHSSKGKKCKKVAVTCSGVSARQRRMNT------KRKTAIKTCGAM 173

Query: 1188 HFRSIVSPELLQSRLKGYVKGVTSEELLTHAEVVHLSKKIKAGLSLEDHKSRLKERLGYD 1009
              +S +SPELLQ RLKGYVKG+ SEELL+HAEVV+LS++IK GLSLE+HKSRLKERLG +
Sbjct: 174  QLKSKISPELLQHRLKGYVKGIVSEELLSHAEVVNLSERIKVGLSLEEHKSRLKERLGCE 233

Query: 1008 PSDEQLATSLKITRAELHSKLIECSLAREKLAMSNVRLVMSIAQKYDNMGAEMGDLVQGG 829
            PSD+Q+A SLKI+R EL +++IEC+LAREKLAMSNVRLVMSIAQKYDN+GAEMGDLVQGG
Sbjct: 234  PSDDQMAISLKISRTELRARMIECTLAREKLAMSNVRLVMSIAQKYDNLGAEMGDLVQGG 293

Query: 828  LIGLLRGIEKFDSSKGFKISTYVYWWIRQGVSRALIENSRTLRLPTYLHERLSLIRNAKI 649
            LIGLLRGIEKFDSSKGFKISTYVYWWIRQGVSRAL+ENSRTLRLP +LHERLSLIRNAK 
Sbjct: 294  LIGLLRGIEKFDSSKGFKISTYVYWWIRQGVSRALVENSRTLRLPAHLHERLSLIRNAKF 353

Query: 648  RLEEKGITPSIDRIAECLNMSQKKVRNATEAISKVISLDKEAFPSLNGLPGETLHSYIAD 469
            RLEE+GITP+IDRIA+ LNMSQKKVRNATEAISK ISLD+EAFPSLNG+ GET HSYIAD
Sbjct: 354  RLEERGITPTIDRIAKYLNMSQKKVRNATEAISKTISLDREAFPSLNGIQGETHHSYIAD 413

Query: 468  NRLENNPWHGVDEWSLKDEVNNLISTTLGERERDIIRLYHGLDKECLTWEDISRRIGLSR 289
            +R+EN PW+GVDEW+LKDEVN LI+ TL ERER+IIRLY+GLDKE LTWEDIS+RIGLSR
Sbjct: 414  DRVENIPWNGVDEWALKDEVNKLINVTLVEREREIIRLYYGLDKEGLTWEDISKRIGLSR 473

Query: 288  ERVRQVGLVALEKLKHAARKRRLEAMLVKH 199
            ERVRQVGLVALEKLKHAARKR++EAML+KH
Sbjct: 474  ERVRQVGLVALEKLKHAARKRQMEAMLLKH 503


>ref|XP_004307835.1| PREDICTED: RNA polymerase sigma factor sigA-like [Fragaria vesca
            subsp. vesca]
          Length = 511

 Score =  659 bits (1700), Expect = 0.0
 Identities = 360/514 (70%), Positives = 408/514 (79%), Gaps = 8/514 (1%)
 Frame = -1

Query: 1716 MATAA-VIGLSA-GKRLLSSSSYYSDITDKLLPFHDYGLTQYQTSLAKNVTIAKKSSNFG 1543
            MATAA V+GLS+ GKRLLSSS  YSDITDKL   +D+G    Q S  KNV  A+KSS+  
Sbjct: 1    MATAAAVVGLSSTGKRLLSSSLSYSDITDKLFYLNDHGFVNCQLSSTKNVVTARKSSSKY 60

Query: 1542 LN--FPS-NRHTEH-INALKEHVDASSTPA--TDAWLQRSNFIEEGSSDIESSVEVLLLL 1381
             N  FPS NRH E  I AL+EH D +S P+  T   L+    +EE SSD+E SVE LLLL
Sbjct: 61   SNSRFPSSNRHHEQSIRALQEHADTASAPSSTTHQLLEEYTDLEEESSDLEYSVEALLLL 120

Query: 1380 QKSMLEKQWNLSFEQRRIMGVPGDERLKKFQVTXXXXXXXXXXXXXXXXSLDQNSIEVPP 1201
            QKS+LEKQWNLSFE++       D    K  VT                +  +N+ E+ P
Sbjct: 121  QKSLLEKQWNLSFEKKLSTRKITDN---KIPVTCSGVSARQRRMSTKRKAFSKNTSELQP 177

Query: 1200 GRRKHFRSIVSPELLQSRLKGYVKGVTSEELLTHAEVVHLSKKIKAGLSLEDHKSRLKER 1021
               K+ R+ +SP LLQ+R  GYVKGVTS+ LLTH EVV LSKKIK GLS+E+HKSRLKE+
Sbjct: 178  STNKYCRATISPSLLQNRTSGYVKGVTSDHLLTHTEVVRLSKKIKIGLSVEEHKSRLKEK 237

Query: 1020 LGYDPSDEQLATSLKITRAELHSKLIECSLAREKLAMSNVRLVMSIAQKYDNMGAEMGDL 841
            LG +PS EQLATSL+I+R EL SKLI+CSLAREKL MSNVRLVMSIAQ+YDNMGAEM DL
Sbjct: 238  LGCEPSVEQLATSLRISRTELQSKLIQCSLAREKLTMSNVRLVMSIAQRYDNMGAEMADL 297

Query: 840  VQGGLIGLLRGIEKFDSSKGFKISTYVYWWIRQGVSRALIENSRTLRLPTYLHERLSLIR 661
            +QGGLIGLLRGIEKFD+SKGFKISTYVYWWIRQGVSRAL+ENSRTLRLPT+LHERL LIR
Sbjct: 298  IQGGLIGLLRGIEKFDASKGFKISTYVYWWIRQGVSRALVENSRTLRLPTHLHERLGLIR 357

Query: 660  NAKIRLEEKGITPSIDRIAECLNMSQKKVRNATEAISKVISLDKEAFPSLNGLPGETLHS 481
            NAK+RLEEKGITPSID IAE LNMS+KKVRNATEAISKV SLD++AFPSLNGLPGET HS
Sbjct: 358  NAKVRLEEKGITPSIDSIAESLNMSKKKVRNATEAISKVFSLDRDAFPSLNGLPGETHHS 417

Query: 480  YIADNRLENNPWHGVDEWSLKDEVNNLISTTLGERERDIIRLYHGLDKECLTWEDISRRI 301
            YIADNR EN PWHG+DE +LKDEVN LI+  LGERER+IIRLY+GLD ECLTWEDIS+RI
Sbjct: 418  YIADNRHENIPWHGLDELALKDEVNKLINLMLGEREREIIRLYYGLDNECLTWEDISKRI 477

Query: 300  GLSRERVRQVGLVALEKLKHAARKRRLEAMLVKH 199
            GLSRERVRQVGLVALEKLKH ARK+ LEAMLV+H
Sbjct: 478  GLSRERVRQVGLVALEKLKHGARKKELEAMLVQH 511


>emb|CBI26421.3| unnamed protein product [Vitis vinifera]
          Length = 555

 Score =  656 bits (1693), Expect = 0.0
 Identities = 360/514 (70%), Positives = 410/514 (79%), Gaps = 2/514 (0%)
 Frame = -1

Query: 1734 VRRSHRMATAAVIGLSAGKRLLSSSSYYSDITDKLLPF-HDYGLTQYQTSLAKNVTIAKK 1558
            V +SH M TAAVIGLSAG RLL+SS +YSD+ +KL  + +D G   + +   KN+  AKK
Sbjct: 67   VLQSHMMGTAAVIGLSAGNRLLASSHHYSDVAEKLSSYVNDVGFPHHPSPPPKNLISAKK 126

Query: 1557 SSNFGLNFPSNRHTEHINALKEHVDASSTPAT-DAWLQRSNFIEEGSSDIESSVEVLLLL 1381
             SN+  +  SNR  + + ALKEHV+++S P+T D  L  S+   E   D E  VE  LLL
Sbjct: 127  PSNYTPS--SNRSIQSMKALKEHVESASAPSTADPDLSSSSSEVE---DEEYLVEAFLLL 181

Query: 1380 QKSMLEKQWNLSFEQRRIMGVPGDERLKKFQVTXXXXXXXXXXXXXXXXSLDQNSIEVPP 1201
            QKSMLEKQWNLSF+ R+          K+ +VT                 +++ S     
Sbjct: 182  QKSMLEKQWNLSFKARQ----------KRREVTCSGTSARQRRISGRKRVMNEKS----- 226

Query: 1200 GRRKHFRSIVSPELLQSRLKGYVKGVTSEELLTHAEVVHLSKKIKAGLSLEDHKSRLKER 1021
              +   R+ +  E   +RLKGYVKGV SEELLTHA+VV LS KIKAGL LEDHKSRLKER
Sbjct: 227  --KSRVRAALGVE---NRLKGYVKGVVSEELLTHAQVVLLSNKIKAGLLLEDHKSRLKER 281

Query: 1020 LGYDPSDEQLATSLKITRAELHSKLIECSLAREKLAMSNVRLVMSIAQKYDNMGAEMGDL 841
            +G +P+DEQ+A SL+++RAEL SKLIECSLAREKLAMSNVRLVMSIAQ+YDNMGAEM DL
Sbjct: 282  IGSEPTDEQVAASLRMSRAELQSKLIECSLAREKLAMSNVRLVMSIAQRYDNMGAEMADL 341

Query: 840  VQGGLIGLLRGIEKFDSSKGFKISTYVYWWIRQGVSRALIENSRTLRLPTYLHERLSLIR 661
            VQGGLIGLLRGIEKFDSSKGFKISTYVYWWIRQGVSRAL+ENSRTLRLP++LHERLSLIR
Sbjct: 342  VQGGLIGLLRGIEKFDSSKGFKISTYVYWWIRQGVSRALVENSRTLRLPSHLHERLSLIR 401

Query: 660  NAKIRLEEKGITPSIDRIAECLNMSQKKVRNATEAISKVISLDKEAFPSLNGLPGETLHS 481
            NAKIRLEEKGITPSIDRIAECLNMSQKKVRNATEAISKV SLD+EAFPSLNGLPGETLHS
Sbjct: 402  NAKIRLEEKGITPSIDRIAECLNMSQKKVRNATEAISKVFSLDREAFPSLNGLPGETLHS 461

Query: 480  YIADNRLENNPWHGVDEWSLKDEVNNLISTTLGERERDIIRLYHGLDKECLTWEDISRRI 301
            YIAD RLENNPWHGVDEW+LKDEVN LI+TTLGERERDIIRLY+GLD ECLTWEDIS+RI
Sbjct: 462  YIADVRLENNPWHGVDEWALKDEVNKLINTTLGERERDIIRLYYGLDNECLTWEDISKRI 521

Query: 300  GLSRERVRQVGLVALEKLKHAARKRRLEAMLVKH 199
            GLSRERVRQVGLVALEKLK+AARK R+EAMLVK+
Sbjct: 522  GLSRERVRQVGLVALEKLKNAARKGRMEAMLVKY 555


>dbj|BAA88922.1| sigma factor [Nicotiana tabacum]
          Length = 502

 Score =  652 bits (1683), Expect = 0.0
 Identities = 347/504 (68%), Positives = 392/504 (77%), Gaps = 2/504 (0%)
 Frame = -1

Query: 1704 AVIGLSAGKRLLSSSSYYSDITDKLLPFHDYGLTQYQTSLAKNVTIAKKSSNFGLNFPSN 1525
            A+IGLSAG R+LSSS YYS +T+K     D+ L  +     KNV  AK SSN+  ++ SN
Sbjct: 3    AIIGLSAGNRILSSSFYYSVLTEKFC-VSDHALPCHHFPSPKNVINAKNSSNYSPSYVSN 61

Query: 1524 RHTEHINALKEHVDASSTPATDA--WLQRSNFIEEGSSDIESSVEVLLLLQKSMLEKQWN 1351
            R  + + ALKEHVD +S   +D   W+Q    ++ GS   E SVEVLLLLQKSMLEKQWN
Sbjct: 62   RKKQSVKALKEHVDIASNRDSDTEPWVQMFKQLQNGSCSEEDSVEVLLLLQKSMLEKQWN 121

Query: 1350 LSFEQRRIMGVPGDERLKKFQVTXXXXXXXXXXXXXXXXSLDQNSIEVPPGRRKHFRSIV 1171
            LS E+        +   KK Q+T                 L   +        K  RS++
Sbjct: 122  LSAEKAM---TNENNCKKKMQITCSGTSARRRRMDTRKRDLLPKNSATSDSSSKRLRSVI 178

Query: 1170 SPELLQSRLKGYVKGVTSEELLTHAEVVHLSKKIKAGLSLEDHKSRLKERLGYDPSDEQL 991
             PELLQ+R KGY+ GV  +ELLTH EVV LSKKIK GL LE+ KSRLKERLG +PSD+QL
Sbjct: 179  GPELLQNRSKGYINGVVGQELLTHTEVVQLSKKIKFGLYLEEQKSRLKERLGCEPSDDQL 238

Query: 990  ATSLKITRAELHSKLIECSLAREKLAMSNVRLVMSIAQKYDNMGAEMGDLVQGGLIGLLR 811
            A SLKI+RA+L S LIECSLAREKLAMSNVRLVMSIAQ+YD  G EM DL+QGGLIGLLR
Sbjct: 239  AISLKISRADLRSTLIECSLAREKLAMSNVRLVMSIAQRYDTNGTEMADLIQGGLIGLLR 298

Query: 810  GIEKFDSSKGFKISTYVYWWIRQGVSRALIENSRTLRLPTYLHERLSLIRNAKIRLEEKG 631
            GIEKFD S+GFKISTYVYWWIRQGVSRAL+ENSRTLRLP +LHERLSLIRNAKI+L+E G
Sbjct: 299  GIEKFDHSRGFKISTYVYWWIRQGVSRALVENSRTLRLPIHLHERLSLIRNAKIKLKENG 358

Query: 630  ITPSIDRIAECLNMSQKKVRNATEAISKVISLDKEAFPSLNGLPGETLHSYIADNRLENN 451
            ITPSI++IAECLNMSQKKVRNATEA SKV SLD+EAFPSLNGLPGETLHSYIADNRLEN 
Sbjct: 359  ITPSIEKIAECLNMSQKKVRNATEASSKVFSLDREAFPSLNGLPGETLHSYIADNRLENI 418

Query: 450  PWHGVDEWSLKDEVNNLISTTLGERERDIIRLYHGLDKECLTWEDISRRIGLSRERVRQV 271
            PWHGVDEW LKDEVNNLIS+TL ERER+I+RLY+GLD ECLTWEDISRRIGLSRERVRQV
Sbjct: 419  PWHGVDEWMLKDEVNNLISSTLREREREIVRLYYGLDNECLTWEDISRRIGLSRERVRQV 478

Query: 270  GLVALEKLKHAARKRRLEAMLVKH 199
            GLVALEKLKHAARKRRL+AMLVKH
Sbjct: 479  GLVALEKLKHAARKRRLDAMLVKH 502


>ref|XP_002264964.2| PREDICTED: RNA polymerase sigma-B factor-like isoform 2 [Vitis
            vinifera]
          Length = 497

 Score =  651 bits (1680), Expect = 0.0
 Identities = 360/513 (70%), Positives = 408/513 (79%), Gaps = 7/513 (1%)
 Frame = -1

Query: 1716 MATAAVIGLSAGKRLLSSSSYYSDITDKLLPF-HDYGLTQYQTSLAKNVTIAKKSSNFGL 1540
            M TAAVIGLSAG RLL+SS +YSD+ +KL  + +D G   + +   KN+  AKK SN+  
Sbjct: 2    MGTAAVIGLSAGNRLLASSHHYSDVAEKLSSYVNDVGFPHHPSPPPKNLISAKKPSNYTP 61

Query: 1539 NFPSNRHTEHINALKEHVDASSTPAT-DAWLQRSNFIEEGSSDIESSVEVLLLLQKSMLE 1363
            +  SNR  + + ALKEHV+++S P+T D  L  S+   E   D E  VE  LLLQKSMLE
Sbjct: 62   S--SNRSIQSMKALKEHVESASAPSTADPDLSSSSSEVE---DEEYLVEAFLLLQKSMLE 116

Query: 1362 KQWNLSFEQRRI-----MGVPGDERLKKFQVTXXXXXXXXXXXXXXXXSLDQNSIEVPPG 1198
            KQWNLSFE+        MG     R K+ +VT                 +++ S      
Sbjct: 117  KQWNLSFEEEEEEEEEDMGKKA--RQKRREVTCSGTSARQRRISGRKRVMNEKS------ 168

Query: 1197 RRKHFRSIVSPELLQSRLKGYVKGVTSEELLTHAEVVHLSKKIKAGLSLEDHKSRLKERL 1018
             +   R+ +  E   +RLKGYVKGV SEELLTHA+VV LS KIKAGL LEDHKSRLKER+
Sbjct: 169  -KSRVRAALGVE---NRLKGYVKGVVSEELLTHAQVVLLSNKIKAGLLLEDHKSRLKERI 224

Query: 1017 GYDPSDEQLATSLKITRAELHSKLIECSLAREKLAMSNVRLVMSIAQKYDNMGAEMGDLV 838
            G +P+DEQ+A SL+++RAEL SKLIECSLAREKLAMSNVRLVMSIAQ+YDNMGAEM DLV
Sbjct: 225  GSEPTDEQVAASLRMSRAELQSKLIECSLAREKLAMSNVRLVMSIAQRYDNMGAEMADLV 284

Query: 837  QGGLIGLLRGIEKFDSSKGFKISTYVYWWIRQGVSRALIENSRTLRLPTYLHERLSLIRN 658
            QGGLIGLLRGIEKFDSSKGFKISTYVYWWIRQGVSRAL+ENSRTLRLP++LHERLSLIRN
Sbjct: 285  QGGLIGLLRGIEKFDSSKGFKISTYVYWWIRQGVSRALVENSRTLRLPSHLHERLSLIRN 344

Query: 657  AKIRLEEKGITPSIDRIAECLNMSQKKVRNATEAISKVISLDKEAFPSLNGLPGETLHSY 478
            AKIRLEEKGITPSIDRIAECLNMSQKKVRNATEAISKV SLD+EAFPSLNGLPGETLHSY
Sbjct: 345  AKIRLEEKGITPSIDRIAECLNMSQKKVRNATEAISKVFSLDREAFPSLNGLPGETLHSY 404

Query: 477  IADNRLENNPWHGVDEWSLKDEVNNLISTTLGERERDIIRLYHGLDKECLTWEDISRRIG 298
            IAD RLENNPWHGVDEW+LKDEVN LI+TTLGERERDIIRLY+GLD ECLTWEDIS+RIG
Sbjct: 405  IADVRLENNPWHGVDEWALKDEVNKLINTTLGERERDIIRLYYGLDNECLTWEDISKRIG 464

Query: 297  LSRERVRQVGLVALEKLKHAARKRRLEAMLVKH 199
            LSRERVRQVGLVALEKLK+AARK R+EAMLVK+
Sbjct: 465  LSRERVRQVGLVALEKLKNAARKGRMEAMLVKY 497


>ref|XP_007131471.1| hypothetical protein PHAVU_011G016400g [Phaseolus vulgaris]
            gi|561004471|gb|ESW03465.1| hypothetical protein
            PHAVU_011G016400g [Phaseolus vulgaris]
          Length = 504

 Score =  650 bits (1678), Expect = 0.0
 Identities = 353/511 (69%), Positives = 404/511 (79%), Gaps = 5/511 (0%)
 Frame = -1

Query: 1716 MATAAVIGLSAGKRLLSSSSYYSDITDKLLPFHDYGLTQYQTSLAKNVTIAKKSSNFGLN 1537
            MA+AAVIGLS GKRLLSSS +YSDI +KL    D+G T YQ    K+V +AKKSSN+   
Sbjct: 1    MASAAVIGLSGGKRLLSSSYHYSDIIEKLSYGSDFGSTHYQIVSTKSVIVAKKSSNYTPT 60

Query: 1536 FPS-NRHTEHINALKEHVDASSTPATDAWLQR--SNFIEEGSSDIESSVEVLLLLQKSML 1366
            FP+ NR  + I  LKE VD ++T A DAW Q   SN +E  SS++  SVE LLLLQKSML
Sbjct: 61   FPAPNRQNQSIKVLKEIVDDAATVA-DAWFQSLSSNDLEVESSEMGYSVEALLLLQKSML 119

Query: 1365 EKQWNLSFEQRRIMGVPGDER--LKKFQVTXXXXXXXXXXXXXXXXSLDQNSIEVPPGRR 1192
            EKQW+LSFE   +      E+   K   VT                   +    V  G  
Sbjct: 120  EKQWSLSFEGEGVTEHSSKEKNCRKVAAVTCSGVSARQRRMNA------KRKTAVKTGGA 173

Query: 1191 KHFRSIVSPELLQSRLKGYVKGVTSEELLTHAEVVHLSKKIKAGLSLEDHKSRLKERLGY 1012
               +S +SPELLQ+RLKGYVKGV SEELL+HA+VV LS+KIK GLSLE+HKSR+KERLG 
Sbjct: 174  VQLKSKISPELLQNRLKGYVKGVVSEELLSHAQVVSLSEKIKVGLSLEEHKSRMKERLGC 233

Query: 1011 DPSDEQLATSLKITRAELHSKLIECSLAREKLAMSNVRLVMSIAQKYDNMGAEMGDLVQG 832
            +PSD+++ATSLKI+  EL  K++ECSLAREKLAMSNVRLVMSIAQ+Y+N G EMGDLVQG
Sbjct: 234  EPSDDEIATSLKISSTELREKMLECSLAREKLAMSNVRLVMSIAQRYENAGTEMGDLVQG 293

Query: 831  GLIGLLRGIEKFDSSKGFKISTYVYWWIRQGVSRALIENSRTLRLPTYLHERLSLIRNAK 652
            GLIGLLRGIEKFDSSKGFKISTYVYWWIRQGVS+ALIENSRTLRLP +LHERLSLIRNAK
Sbjct: 294  GLIGLLRGIEKFDSSKGFKISTYVYWWIRQGVSKALIENSRTLRLPAHLHERLSLIRNAK 353

Query: 651  IRLEEKGITPSIDRIAECLNMSQKKVRNATEAISKVISLDKEAFPSLNGLPGETLHSYIA 472
            +RLEE+GITP+IDRIA+ LNMSQKKVRNATEAISK ISLD+EAFPSLNGL G+T HSYIA
Sbjct: 354  LRLEERGITPTIDRIAQHLNMSQKKVRNATEAISKTISLDREAFPSLNGLRGDTHHSYIA 413

Query: 471  DNRLENNPWHGVDEWSLKDEVNNLISTTLGERERDIIRLYHGLDKECLTWEDISRRIGLS 292
            DNR+EN PW GVDEW+LKDEVN LI+ TL ERER+IIRLY+GL KECLTWEDIS+R+GLS
Sbjct: 414  DNRVENIPWEGVDEWALKDEVNRLINVTLKEREREIIRLYYGLGKECLTWEDISKRMGLS 473

Query: 291  RERVRQVGLVALEKLKHAARKRRLEAMLVKH 199
            RERVRQVGLVALEKLKH AR R LEAML+KH
Sbjct: 474  RERVRQVGLVALEKLKHGARNRELEAMLLKH 504


>ref|XP_006419162.1| hypothetical protein EUTSA_v10002486mg [Eutrema salsugineum]
            gi|557097090|gb|ESQ37598.1| hypothetical protein
            EUTSA_v10002486mg [Eutrema salsugineum]
          Length = 519

 Score =  649 bits (1675), Expect = 0.0
 Identities = 351/519 (67%), Positives = 413/519 (79%), Gaps = 13/519 (2%)
 Frame = -1

Query: 1716 MATAAVIGLSAGKRLLSSSSYYSDITDKLLPFHDYGLTQYQTSLAKNVTIAKK----SSN 1549
            MATAAVIGL+AGKRLLSSS YYSD+T+K L  +D+  +QY  +  ++   AKK    SSN
Sbjct: 2    MATAAVIGLNAGKRLLSSSFYYSDVTEKFLSVNDHCSSQYHIASTRSGITAKKTPSSSSN 61

Query: 1548 FGLNFPSN-RHTEHINALKEHVDASSTPATDAWLQRSNFIE-EGSS---DIESSVEVLLL 1384
            +  + PS+ RHT+   ALKE VD  ++ +   WL   +  E EG S   D+  SVE LLL
Sbjct: 62   YSPSLPSSSRHTQSAKALKETVDVVAS-SVQPWLPPGSDKEMEGESYEDDLGHSVEALLL 120

Query: 1383 LQKSMLEKQWNLSFEQRRIMGVPGDERL--KKFQVTXXXXXXXXXXXXXXXXS-LDQNSI 1213
            LQKSMLEKQWNLSFE+      P  +R+  KK  VT                + +    +
Sbjct: 121  LQKSMLEKQWNLSFEKAATSESPSKKRMTRKKNPVTCSGISARQRRIGAKKKTNMSHVKV 180

Query: 1212 EVPPGRRKHFRSIVSPELLQS-RLKGYVKGVTSEELLTHAEVVHLSKKIKAGLSLEDHKS 1036
                   K  +S+++ EL Q+ R+KGYV+GV SE++L+HAEVV LSKKIK+GL L+DHKS
Sbjct: 181  VSEVSSGKQVKSVINSELFQNNRVKGYVRGVVSEDVLSHAEVVRLSKKIKSGLRLDDHKS 240

Query: 1035 RLKERLGYDPSDEQLATSLKITRAELHSKLIECSLAREKLAMSNVRLVMSIAQKYDNMGA 856
            RLK+RLG +PSDEQLA SLKI+R EL + L+EC LAREKLAMSNVRLVMSIAQ+YDNMGA
Sbjct: 241  RLKDRLGCEPSDEQLAISLKISRGELQAWLMECHLAREKLAMSNVRLVMSIAQRYDNMGA 300

Query: 855  EMGDLVQGGLIGLLRGIEKFDSSKGFKISTYVYWWIRQGVSRALIENSRTLRLPTYLHER 676
            EM DLVQGGLIGLLRGIEKFDSSKGF+ISTYVYWWIRQGVSRAL++NSRTLRLPT+LHER
Sbjct: 301  EMSDLVQGGLIGLLRGIEKFDSSKGFRISTYVYWWIRQGVSRALVDNSRTLRLPTHLHER 360

Query: 675  LSLIRNAKIRLEEKGITPSIDRIAECLNMSQKKVRNATEAISKVISLDKEAFPSLNGLPG 496
            L LIRNAK+RL+EKGITPSIDRIAE LNMSQKKVRNATEA+SK+ SLD++AFPSLNGLPG
Sbjct: 361  LGLIRNAKLRLQEKGITPSIDRIAESLNMSQKKVRNATEAVSKIFSLDRDAFPSLNGLPG 420

Query: 495  ETLHSYIADNRLENNPWHGVDEWSLKDEVNNLISTTLGERERDIIRLYHGLDKECLTWED 316
            ET HSYIADNRLENNPWHG DEW+LKDEV+ LIS TLGERER+IIRLY+GLDKECLTWED
Sbjct: 421  ETHHSYIADNRLENNPWHGYDEWALKDEVSKLISATLGEREREIIRLYYGLDKECLTWED 480

Query: 315  ISRRIGLSRERVRQVGLVALEKLKHAARKRRLEAMLVKH 199
            IS+RIGLSRERVRQVGLVALEKLKHAARKR++EAM++K+
Sbjct: 481  ISKRIGLSRERVRQVGLVALEKLKHAARKRKMEAMILKN 519


>ref|XP_006347341.1| PREDICTED: RNA polymerase sigma factor sigA-like isoform X1 [Solanum
            tuberosum] gi|565361192|ref|XP_006347342.1| PREDICTED:
            RNA polymerase sigma factor sigA-like isoform X2 [Solanum
            tuberosum]
          Length = 505

 Score =  638 bits (1645), Expect = e-180
 Identities = 339/508 (66%), Positives = 396/508 (77%), Gaps = 2/508 (0%)
 Frame = -1

Query: 1716 MATAAVIGLSAGKRLLSSSSYYSDITDKLLPFHDYGLTQYQTSLAKNVTIAKKSSNFGLN 1537
            MA AAVIGL AG R+LSSS YYSD+T+KL    D+ L    T    NV  AKKSSN+   
Sbjct: 1    MAIAAVIGLYAGNRILSSSFYYSDLTEKLACSGDHALICNPTW---NVINAKKSSNYSTG 57

Query: 1536 FPSNRHTEHINALKEHVD-ASSTPATDAWLQRSNFIEEGSSDIESSVEVLLLLQKSMLEK 1360
            + SNR  + + A+KEHV+ AS+    +  ++    ++  S   E SVEVLLLLQKSMLEK
Sbjct: 58   YVSNRKKQSVKAVKEHVNIASNHSDVEPMVEMFKKLQNESFSEEDSVEVLLLLQKSMLEK 117

Query: 1359 QWNLSFEQRRIMGVPGDERLKK-FQVTXXXXXXXXXXXXXXXXSLDQNSIEVPPGRRKHF 1183
            QWNLS E+      P ++  KK  Q+T                     +        K  
Sbjct: 118  QWNLSAEKTLAAFPPNEKNCKKKMQITCSGTSARRRRMDTRKRVQIPKTSAAANSASKRL 177

Query: 1182 RSIVSPELLQSRLKGYVKGVTSEELLTHAEVVHLSKKIKAGLSLEDHKSRLKERLGYDPS 1003
            RS+V PEL Q+RL+GY+KGV ++ELLTH EVV LSKKIK GL LE+ K+ LKERLG +PS
Sbjct: 178  RSVVGPELQQNRLRGYMKGVVNQELLTHKEVVQLSKKIKFGLYLEEQKASLKERLGCEPS 237

Query: 1002 DEQLATSLKITRAELHSKLIECSLAREKLAMSNVRLVMSIAQKYDNMGAEMGDLVQGGLI 823
            D+QLA SLK++ A+L S L+ECSLAREKLAMSNVRLVMSIAQ+YD+MG EM DL+QGGLI
Sbjct: 238  DDQLAVSLKMSLADLRSTLMECSLAREKLAMSNVRLVMSIAQRYDSMGTEMADLIQGGLI 297

Query: 822  GLLRGIEKFDSSKGFKISTYVYWWIRQGVSRALIENSRTLRLPTYLHERLSLIRNAKIRL 643
            GLLRGIEKFD S+GFKISTYVYWWIRQGVSRAL++NSRTLRLP +LHERLSLIRNAK++L
Sbjct: 298  GLLRGIEKFDHSRGFKISTYVYWWIRQGVSRALVDNSRTLRLPIHLHERLSLIRNAKVKL 357

Query: 642  EEKGITPSIDRIAECLNMSQKKVRNATEAISKVISLDKEAFPSLNGLPGETLHSYIADNR 463
            ++ GITPSI++IAECLNMSQKKVRNATEA SKV SLD+EA+PSLNGLPG TLHSYIADNR
Sbjct: 358  KDNGITPSIEKIAECLNMSQKKVRNATEASSKVFSLDREAYPSLNGLPGATLHSYIADNR 417

Query: 462  LENNPWHGVDEWSLKDEVNNLISTTLGERERDIIRLYHGLDKECLTWEDISRRIGLSRER 283
            LENNPWHGVD W+LKDEVNNLIS+TL ERERDI+RLY+GLD ECLTWEDISRRIGLSRER
Sbjct: 418  LENNPWHGVDGWALKDEVNNLISSTLRERERDIVRLYYGLDNECLTWEDISRRIGLSRER 477

Query: 282  VRQVGLVALEKLKHAARKRRLEAMLVKH 199
            VRQVGLVALEKLKHAARK++L+AMLVKH
Sbjct: 478  VRQVGLVALEKLKHAARKKQLDAMLVKH 505