BLASTX nr result
ID: Akebia27_contig00007038
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Akebia27_contig00007038
(2999 letters)
Database: ./nr
38,876,450 sequences; 13,856,398,315 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
emb|CBI28010.3| unnamed protein product [Vitis vinifera] 1054 0.0
ref|XP_002280491.1| PREDICTED: probable RNA-dependent RNA polyme... 1045 0.0
ref|XP_006451272.1| hypothetical protein CICLE_v10007331mg [Citr... 979 0.0
ref|XP_006451271.1| hypothetical protein CICLE_v10007331mg [Citr... 976 0.0
ref|XP_006380470.1| hypothetical protein POPTR_0007s06560g [Popu... 971 0.0
ref|XP_006380469.1| hypothetical protein POPTR_0007s06560g [Popu... 971 0.0
ref|XP_006853665.1| hypothetical protein AMTR_s00056p00110240 [A... 945 0.0
ref|XP_006381765.1| hypothetical protein POPTR_0006s17780g [Popu... 927 0.0
ref|XP_002883963.1| RNA-dependent RNA polymerase family protein ... 900 0.0
ref|XP_004135802.1| PREDICTED: probable RNA-dependent RNA polyme... 895 0.0
ref|XP_004288887.1| PREDICTED: probable RNA-dependent RNA polyme... 890 0.0
ref|XP_006296906.1| hypothetical protein CARUB_v10012898mg [Caps... 879 0.0
ref|NP_179583.3| probable RNA-dependent RNA polymerase 5 [Arabid... 871 0.0
ref|XP_006572940.1| PREDICTED: probable RNA-dependent RNA polyme... 869 0.0
ref|XP_006408908.1| hypothetical protein EUTSA_v10001897mg [Eutr... 867 0.0
ref|XP_007204275.1| hypothetical protein PRUPE_ppa001584mg [Prun... 862 0.0
ref|NP_179581.2| probable RNA-dependent RNA polymerase 3 [Arabid... 856 0.0
ref|XP_006353487.1| PREDICTED: probable RNA-dependent RNA polyme... 845 0.0
ref|XP_004513037.1| PREDICTED: probable RNA-dependent RNA polyme... 843 0.0
gb|EEE54052.1| hypothetical protein OsJ_00745 [Oryza sativa Japo... 828 0.0
>emb|CBI28010.3| unnamed protein product [Vitis vinifera]
Length = 929
Score = 1054 bits (2725), Expect = 0.0
Identities = 564/986 (57%), Positives = 694/986 (70%), Gaps = 9/986 (0%)
Frame = +3
Query: 3 ICEEQSLLSPDIRARRELSLLGEEASLQLLQRT-----RNLSDYIIYMAGVSDPVSSQEX 167
IC EQ P+ RR L+ LGEE++L+LL++ RNLS I YM G + +
Sbjct: 16 ICTEQQQPPPEAHTRRNLASLGEESTLELLRKISHLKIRNLSALINYMVGKAAQGDAAS- 74
Query: 168 XXXXXXXXXXXXXXXXXXXXXTKLPFSNLEEPKPKGQMNLNXXXXXXXXXXXXXXXXXXH 347
P PK ++
Sbjct: 75 -----------------------------HSPTPKHLIS----SPSSTPKKARRQASSPQ 101
Query: 348 LLSLGELEFRKAFLILSYCGKKKLEESISVDLIQSMKNLPMTEFESQLWRLVGQKCIEET 527
L++LGELEFRKAFLILSY G K+ E+ +S + I +KNLPM FE+++W +G+K I+E
Sbjct: 102 LVALGELEFRKAFLILSYIGDKRPEDLLSAEEILKLKNLPMGVFETEVWNNLGRKFIKEE 161
Query: 528 DRSKSLDWDSGRTYIYRCYVDPDGSYTFKGPHLHLQKQKTHLQRVLGDDNVLDVRFAEEV 707
DR +S DWDS +T+IY C+V PDGSY FKGP+L+ K +THLQRVLGD+N+L V+FAE+V
Sbjct: 162 DRQRSFDWDSDKTHIYHCHVSPDGSYRFKGPYLN--KTRTHLQRVLGDENILLVKFAEDV 219
Query: 708 VNRNDFN---RSNAGYQNIANEGIYVGLRRYQFFVFKDGGKEEKKKSLTSSPVKCYFVRM 878
+R+ N SNA Y IA EGI+VGLR+Y+FFVFKDGGKEEKKK+ TSS VKCYFV M
Sbjct: 220 TDRSSLNCSTDSNASYNKIAREGIFVGLRQYRFFVFKDGGKEEKKKNPTSS-VKCYFVFM 278
Query: 879 ESNASIDAEKPYIFSNKSIHEARSVFMHVHTVSSVAKYMARFSLILSKTLKLDVDHASVH 1058
ES+A S K++HEAR +FMH H VSSVAKYMARFSLILSKT+KLDVD ++V+
Sbjct: 279 ESSA---------LSGKTVHEARCIFMHAHMVSSVAKYMARFSLILSKTVKLDVDLSTVN 329
Query: 1059 IDTIEDIDCLDGDGRIIRNEDGEALIHTDGTGFISEDLALKCPRNVYKGHYSSHGEFERN 1238
I I+D D DG ++ +ED + LI TDGTGFISEDLAL+CP N+ +G Y ++G +
Sbjct: 330 IQRIDDEPGRDEDGHVVYDEDWKPLILTDGTGFISEDLALRCPNNLCRGKYMNNGNSD-- 387
Query: 1239 LDRIEFEDKSSELTKSTSHIREPPLLIQFRLFNNGRAVKGTFLVNKKLPPKTIQIRPSMI 1418
PLLIQ RLFNNG AVKGT L+N+KLPP+TIQIRPSMI
Sbjct: 388 -----------------------PLLIQCRLFNNGCAVKGTLLLNRKLPPRTIQIRPSMI 424
Query: 1419 KVDTDPKHLDTQTANSLEIVSTSNRPRKTSYLSRFLIAHLNYGGVPREYFMELLMNALEA 1598
KV+TDPK DTQT NS+EI TSN+PR+ SYLS++LIA L+YGGVP EYFM LL +ALE
Sbjct: 425 KVETDPKLSDTQTVNSVEINGTSNQPRR-SYLSKYLIALLSYGGVPNEYFMNLLKDALED 483
Query: 1599 AQSVHYNKSEALTVSLRYGEMDDFLVPRMILCGIPLNEPYLQYRMSVLLKEERKGLKVGK 1778
A SV +K AL VSLR+GEMDD +V RMIL GIP++EP+L + +S ++ EERKGL+VGK
Sbjct: 484 APSVQSSKRAALRVSLRFGEMDDSIVTRMILSGIPIDEPFLHHCLSFMVNEERKGLRVGK 543
Query: 1779 LPVSECYYLMGTADPTGMLNSDQVCIILDSGQISGKVLVYKHPGLHFGDIHVLTATYVKD 1958
LPV++C+YLMGTADPTG L SD+VCIILD GQ+ G+VLVYKHPGLHFGDIHVL ATYV+
Sbjct: 544 LPVNDCFYLMGTADPTGTLKSDEVCIILDHGQVQGRVLVYKHPGLHFGDIHVLNATYVEA 603
Query: 1959 LELIVGNAKYAIFFPTKGPRSLADEMANSDFDGDMYWVSRNPQLLQYFQPSEPWKRPHSA 2138
LE VGNAKYAIFFP KGPRSLADEMANSDFDGDMYWVSRN QLLQYF+ SEPW R S
Sbjct: 604 LEEFVGNAKYAIFFPIKGPRSLADEMANSDFDGDMYWVSRNQQLLQYFRASEPWMRKRST 663
Query: 2139 KCVCHQKPTDFSTDELENVLFQQFLTARFPLSNTLGMAADSWLSFMDRVLTLGDECAAEK 2318
+ V ++PTDFS DELE+ LFQ FLT RF S+ +GMAAD+WL FMDR+LTL D+C+ EK
Sbjct: 664 RHVPSKRPTDFSPDELEHELFQLFLTTRFQTSSAIGMAADNWLVFMDRLLTLRDDCSDEK 723
Query: 2319 CRVKEKMLQLVDIYYDALDASKTGKKVEVPNELKADKFPHFMKRANSYYSKSILGLIYDK 2498
+K KML+L DIYYDALDA K+G KV V ELKA+KFPHFM R +SY+S SILG IYD
Sbjct: 724 ECLKRKMLELTDIYYDALDAPKSGMKVNVSKELKAEKFPHFMGRESSYHSTSILGQIYDA 783
Query: 2499 VDSFQATELPSKEVWKLPCFSGEA-PVSCLKSWKDHYDHYRNEMTHALKLDSESRQVAAD 2675
V+SFQ +KE+W+LP F+ +A P +CL+SWKD YD YR+EM AL+ E++ A
Sbjct: 784 VESFQPENQSTKEIWRLPLFNIDAVPQACLRSWKDRYDQYRSEMAAALQHGGETKDEYAA 843
Query: 2676 EVIQKYKQKLYGAAEFEESARKQEEIFNEALAIYEISYDYAKKINDVGKCSFAWRVAGRA 2855
EVI KYKQ LYGAAEFEES R E+IF+EALAIY ++Y++ V C+F WRVAGRA
Sbjct: 844 EVINKYKQILYGAAEFEESPRNLEDIFDEALAIYHVTYEFVINGARVSYCNFPWRVAGRA 903
Query: 2856 LCMLHASNQDKDTIVCVKSVLREVLN 2933
LC L+ + ++VCV SVLR+V N
Sbjct: 904 LCKLYTVKLGEKSMVCVPSVLRQVFN 929
>ref|XP_002280491.1| PREDICTED: probable RNA-dependent RNA polymerase 5-like [Vitis
vinifera]
Length = 943
Score = 1045 bits (2703), Expect = 0.0
Identities = 565/994 (56%), Positives = 698/994 (70%), Gaps = 17/994 (1%)
Frame = +3
Query: 3 ICEEQSLLSPDIRARRELSLLGEEASLQLLQRT-----RNLSDYIIYMAGVSDPVSSQEX 167
IC EQ P+ RR L+ LGEE++L+LL++ RNLS I YM G + +
Sbjct: 16 ICTEQQQPPPEAHTRRNLASLGEESTLELLRKISHLKIRNLSALINYMVGKAAQGDAAS- 74
Query: 168 XXXXXXXXXXXXXXXXXXXXXTKLPFSNLEEPKPKGQMNLNXXXXXXXXXXXXXXXXXXH 347
P PK ++
Sbjct: 75 -----------------------------HSPTPKHLIS----SPSSTPKKARRQASSPQ 101
Query: 348 LLSLGELEFRKAFLILSYCGKKKLEESISVDLIQSMKNLPMTEFESQLWRLVGQKCIEET 527
L++LGELEFRKAFLILSY G+ + E+ +S + I +KNLPM FE+++W +G+K I+E
Sbjct: 102 LVALGELEFRKAFLILSYIGELRPEDLLSAEEILKLKNLPMGVFETEVWNNLGRKFIKEE 161
Query: 528 DRSKSLDWDSGRTYIYRCYVDPDGSYTFK--------GPHLHLQKQKTHLQRVLGDDNVL 683
DR +S DWDS +T+IY C+V PDGSY FK GP+L+ K +THLQRVLGD+N+L
Sbjct: 162 DRQRSFDWDSDKTHIYHCHVSPDGSYRFKVCISSSLNGPYLN--KTRTHLQRVLGDENIL 219
Query: 684 DVRFAEEVVNRNDFN---RSNAGYQNIANEGIYVGLRRYQFFVFKDGGKEEKKKSLTSSP 854
V+FAE+V +R+ N SNA Y IA EGI+VGLR+Y+FFVFKDGGKEEKKK+ TSS
Sbjct: 220 LVKFAEDVTDRSSLNCSTDSNASYNKIAREGIFVGLRQYRFFVFKDGGKEEKKKNPTSS- 278
Query: 855 VKCYFVRMESNASIDAEKPYIFSNKSIHEARSVFMHVHTVSSVAKYMARFSLILSKTLKL 1034
VKCYFV MES+A S K++HEAR +FMH H VSSVAKYMARFSLILSKT+KL
Sbjct: 279 VKCYFVFMESSA---------LSGKTVHEARCIFMHAHMVSSVAKYMARFSLILSKTVKL 329
Query: 1035 DVDHASVHIDTIEDIDCLDGDGRIIRNEDGEALIHTDGTGFISEDLALKCPRNVYKGHYS 1214
DVD ++V+I I+D D DG ++ +ED + LI TDGTGFISEDLAL+CP N+ +G Y
Sbjct: 330 DVDLSTVNIQRIDDEPGRDEDGHVVYDEDWKPLILTDGTGFISEDLALRCPNNLCRGKYM 389
Query: 1215 SHGEFERNLDRIEFEDKSSELTKSTSHIREPPLLIQFRLFNNGRAVKGTFLVNKKLPPKT 1394
++G +S++ S PLLIQ RLFNNG AVKGT L+N+KLPP+T
Sbjct: 390 NNG--------------NSDVCDSRY-----PLLIQCRLFNNGCAVKGTLLLNRKLPPRT 430
Query: 1395 IQIRPSMIKVDTDPKHLDTQTANSLEIVSTSNRPRKTSYLSRFLIAHLNYGGVPREYFME 1574
IQIRPSMIKV+TDPK DTQT NS+EI TSN+PR+ SYLS++LIA L+YGGVP EYFM
Sbjct: 431 IQIRPSMIKVETDPKLSDTQTVNSVEINGTSNQPRR-SYLSKYLIALLSYGGVPNEYFMN 489
Query: 1575 LLMNALEAAQSVHYNKSEALTVSLRYGEMDDFLVPRMILCGIPLNEPYLQYRMSVLLKEE 1754
LL +ALE A SV +K AL VSLR+GEMDD +V RMIL GIP++EP+L + +S ++ EE
Sbjct: 490 LLKDALEDAPSVQSSKRAALRVSLRFGEMDDSIVTRMILSGIPIDEPFLHHCLSFMVNEE 549
Query: 1755 RKGLKVGKLPVSECYYLMGTADPTGMLNSDQVCIILDSGQISGKVLVYKHPGLHFGDIHV 1934
RKGL+VGKLPV++C+YLMGTADPTG L SD+VCIILD GQ+ G+VLVYKHPGLHFGDIHV
Sbjct: 550 RKGLRVGKLPVNDCFYLMGTADPTGTLKSDEVCIILDHGQVQGRVLVYKHPGLHFGDIHV 609
Query: 1935 LTATYVKDLELIVGNAKYAIFFPTKGPRSLADEMANSDFDGDMYWVSRNPQLLQYFQPSE 2114
L ATYV+ LE VGNAKYAIFFP KGPRSLADEMANSDFDGDMYWVSRN QLLQYF+ SE
Sbjct: 610 LNATYVEALEEFVGNAKYAIFFPIKGPRSLADEMANSDFDGDMYWVSRNQQLLQYFRASE 669
Query: 2115 PWKRPHSAKCVCHQKPTDFSTDELENVLFQQFLTARFPLSNTLGMAADSWLSFMDRVLTL 2294
PW R S + V ++PTDFS DELE+ LFQ FLT RF S+ +GMAAD+WL FMDR+LTL
Sbjct: 670 PWMRKRSTRHVPSKRPTDFSPDELEHELFQLFLTTRFQTSSAIGMAADNWLVFMDRLLTL 729
Query: 2295 GDECAAEKCRVKEKMLQLVDIYYDALDASKTGKKVEVPNELKADKFPHFMKRANSYYSKS 2474
D+C+ EK +K KML+L DIYYDALDA K+G KV V ELKA+KFPHFM R +SY+S S
Sbjct: 730 RDDCSDEKECLKRKMLELTDIYYDALDAPKSGMKVNVSKELKAEKFPHFMGRESSYHSTS 789
Query: 2475 ILGLIYDKVDSFQATELPSKEVWKLPCFSGEA-PVSCLKSWKDHYDHYRNEMTHALKLDS 2651
ILG IYD V+SFQ +KE+W+LP F+ +A P +CL+SWKD YD YR+EM AL+
Sbjct: 790 ILGQIYDAVESFQPENQSTKEIWRLPLFNIDAVPQACLRSWKDRYDQYRSEMAAALQHGG 849
Query: 2652 ESRQVAADEVIQKYKQKLYGAAEFEESARKQEEIFNEALAIYEISYDYAKKINDVGKCSF 2831
E++ A EVI KYKQ LYGAAEFEES R E+IF+EALAIY ++Y++ V C+F
Sbjct: 850 ETKDEYAAEVINKYKQILYGAAEFEESPRNLEDIFDEALAIYHVTYEFVINGARVSYCNF 909
Query: 2832 AWRVAGRALCMLHASNQDKDTIVCVKSVLREVLN 2933
WRVAGRALC L+ + ++VCV SVLR+V N
Sbjct: 910 PWRVAGRALCKLYTVKLGEKSMVCVPSVLRQVFN 943
>ref|XP_006451272.1| hypothetical protein CICLE_v10007331mg [Citrus clementina]
gi|568843311|ref|XP_006475557.1| PREDICTED: probable
RNA-dependent RNA polymerase 3-like isoform X2 [Citrus
sinensis] gi|557554498|gb|ESR64512.1| hypothetical
protein CICLE_v10007331mg [Citrus clementina]
Length = 1013
Score = 979 bits (2530), Expect = 0.0
Identities = 534/991 (53%), Positives = 673/991 (67%), Gaps = 16/991 (1%)
Frame = +3
Query: 3 ICEEQSLLSPDIRARRELSLLGEEASLQLLQRTRN------LSDYIIYMAGVSDPVSS-- 158
I EQ+ L PD ARR L+ LGE+A+L +L+ + S YI Y+ + S
Sbjct: 26 IYTEQNKLPPDDGARRSLASLGEDAALDVLRTIASDKIKYSFSGYINYLVKKRNNNGSPL 85
Query: 159 QEXXXXXXXXXXXXXXXXXXXXXXTKLPFSNLEEPKPKGQMNLNXXXXXXXXXXXXXXXX 338
+ LP + + P
Sbjct: 86 KRVCFSPSSPQQNRSPVTVTTVRLLNLPQDYVVKQSPVADQQPRGSPMSSISHAMRHRAS 145
Query: 339 XXHLLSLGELEFRKAFLILSYCGKKKLEESISVDLIQSMKNLPMTEFESQLWRLVGQKCI 518
++LGELEFRKAFLILSY G+ LEE I+ D I+ M++L M FES++W +G+K I
Sbjct: 146 IPQYVALGELEFRKAFLILSYIGENSLEEVITADEIRGMRDLQMARFESEVWEKLGRKNI 205
Query: 519 EETDRSKSLDWDSGRTYIYRCYVDPDGSYTFKGPHLHLQKQKTHLQRVLGDDNVLDVRFA 698
+ DR SL WDSG+T++Y C++ G+ TFKGP+L+ + +THLQR LGDDN+L V+F
Sbjct: 206 SQEDRRMSLKWDSGKTHMYHCHISTKGNCTFKGPYLN--QTRTHLQRELGDDNILLVKFD 263
Query: 699 EEVVNR---NDFNRSNAGYQNIANEGIYVGLRRYQFFVFKDGGKEEKKKSLTSSPVKCYF 869
EE+ N++N S + Y IA EGI VGLR Y FFVFKDGGKEEKKK ++SPVKCYF
Sbjct: 264 EELGGHRSSNNWNDSYSKYNEIAREGILVGLRCYHFFVFKDGGKEEKKKDPSTSPVKCYF 323
Query: 870 VRMESNASIDAEKPYIFSNKSIHEARSVFMHVHTVSSVAKYMARFSLILSKTLKLDVDHA 1049
VRMES+A ID YI S K++HEAR +FMHV TVSSVA YM+R SLILSKT+KL+VD +
Sbjct: 324 VRMESSAFIDMGYQYILSGKTVHEARYMFMHVRTVSSVANYMSRLSLILSKTMKLEVDFS 383
Query: 1050 SVHIDTIEDIDCLDGDGRIIRNEDGEALIHTDGTGFISEDLALKCPRNVYKGHYSSHGEF 1229
++I+ IED C D DG ++ +DGEALIHTDGTGFISEDLALKCP VYK ++
Sbjct: 384 RINIERIEDEPCRDKDGNVV-YKDGEALIHTDGTGFISEDLALKCPTYVYKEKCTNDDST 442
Query: 1230 ERNLDRIEFEDKSSELTKSTSHIREPPLLIQFRLFNNGRAVKGTFLVNKKLPPKTIQIRP 1409
ER++DR E E S++ ++ SH EPPLL+Q RLF NG AVKGT L+NKKLPP+TIQIRP
Sbjct: 443 ERSIDRKELEANFSDVARTESHYGEPPLLMQVRLFYNGTAVKGTLLLNKKLPPQTIQIRP 502
Query: 1410 SMIKVDTDPKHLDTQTANSLEIVSTSNRPRKTSYLSRFLIAHLNYGGVPREYFMELLMNA 1589
SMIKV D D QT NSLE+V TSN+PRKT YLSR LIA L+YGGVP +F+++L NA
Sbjct: 503 SMIKVKADRDLSDGQTFNSLEVVKTSNQPRKT-YLSRNLIALLSYGGVPEIFFLDILRNA 561
Query: 1590 LEAAQSVHYNKSEALTVSLRYGEMD-DFLVPRMILCGIPLNEPYLQYRMSVLLKEERKGL 1766
L+ A+ V NK AL VS YG MD DF RMIL GI L+EPYLQ+R+S+L+KEE+K L
Sbjct: 562 LDDARGVFSNKRNALKVSFNYGGMDYDFTSARMILSGISLDEPYLQHRLSILMKEEKKSL 621
Query: 1767 KVGKLPVSECYYLMGTADPTGMLNSDQVCIILDSGQIS-GKVLVYKHPGLHFGDIHVLTA 1943
+ GKLPV+E YYLMGT DPTG+L S++VCIIL GQ+S KVLVY++PGLHFGDIHVL A
Sbjct: 622 QAGKLPVTESYYLMGTVDPTGILKSNEVCIILKDGQVSWEKVLVYRNPGLHFGDIHVLKA 681
Query: 1944 TYVKDLELIVGNAKYAIFFPTKGPRSLADEMANSDFDGDMYWVSRNPQLLQYFQPSEPWK 2123
TYVK+LE VG +KYAIFFP GPRSLADE+A DFDGDMY+VSRNP+LL++F+ SE W
Sbjct: 682 TYVKELEDFVGTSKYAIFFPCNGPRSLADEIAGGDFDGDMYFVSRNPELLKHFKESERWM 741
Query: 2124 RPHSAKCVCHQKPTDFSTDELENVLFQQFLTARFPLSNTLGMAADSWLSFMDRVLTLGDE 2303
S +++P DFS +ELE+ LF+ FL RF SN +AAD W + MDR LTLGDE
Sbjct: 742 ST-SKNLSANKRPIDFSLEELESELFKLFLNTRFCPSNAKSLAADCWQAVMDRFLTLGDE 800
Query: 2304 CAAEKCRVKEKMLQLVDIYYDALDA-SKTGKKVEVPNELKADKFPHFMKR--ANSYYSKS 2474
A EK +KE ML+L++IYYDALDA K+G KVEVP +LK +KFP +M+R + S+ S S
Sbjct: 801 SAEEKAAMKENMLRLINIYYDALDAPKKSGIKVEVPEDLKVEKFPCYMRRDESVSFESTS 860
Query: 2475 ILGLIYDKVDSFQATELPSKEVWKLPCFSGEAPVSCLKSWKDHYDHYRNEMTHALKLDSE 2654
+LG IY+ V S++A + E+WKLPCF P +C+ WK +YD YR EM A+ +
Sbjct: 861 VLGTIYNTVKSYEAVDRSVTEIWKLPCFDDGVPEACMTKWKGYYDQYRWEMKEAIDKCTV 920
Query: 2655 SRQVAADEVIQKYKQKLYGAAEFEESARKQEEIFNEALAIYEISYDYAKKINDVGKCSFA 2834
R+ AA+ VI+KYKQ LYGAAEFE+S R EEI+NEALAIY I+YD A V CSFA
Sbjct: 921 EREEAAELVIEKYKQILYGAAEFEQSTRTLEEIYNEALAIYNITYDLAASRRQVSYCSFA 980
Query: 2835 WRVAGRALCMLHASNQDKDTIVCVKSVLREV 2927
WRVAG AL +A Q +++C SVLRE+
Sbjct: 981 WRVAGSALRKFYARRQGDRSMLCSASVLREI 1011
>ref|XP_006451271.1| hypothetical protein CICLE_v10007331mg [Citrus clementina]
gi|568843309|ref|XP_006475556.1| PREDICTED: probable
RNA-dependent RNA polymerase 3-like isoform X1 [Citrus
sinensis] gi|557554497|gb|ESR64511.1| hypothetical
protein CICLE_v10007331mg [Citrus clementina]
Length = 1015
Score = 976 bits (2523), Expect = 0.0
Identities = 537/1001 (53%), Positives = 678/1001 (67%), Gaps = 26/1001 (2%)
Frame = +3
Query: 3 ICEEQSLLSPDIRARRELSLLGEEASLQLLQRTRN------LSDYIIYMAGVSD------ 146
I EQ+ L PD ARR L+ LGE+A+L +L+ + S YI Y+ +
Sbjct: 26 IYTEQNKLPPDDGARRSLASLGEDAALDVLRTIASDKIKYSFSGYINYLVKKRNNNGSPL 85
Query: 147 ------PVSSQEXXXXXXXXXXXXXXXXXXXXXXTKLPFSNLEEPKPKGQMNLNXXXXXX 308
P S Q+ K S + + +P+G
Sbjct: 86 KRVCFSPSSPQQNRSPVTVTTVRLLNLPQGTDYVVKQ--SPVADQQPRGS------PMSS 137
Query: 309 XXXXXXXXXXXXHLLSLGELEFRKAFLILSYCGKKKLEESISVDLIQSMKNLPMTEFESQ 488
++LGELEFRKAFLILSY G+ LEE I+ D I+ M++L M FES+
Sbjct: 138 ISHAMRHRASIPQYVALGELEFRKAFLILSYIGENSLEEVITADEIRGMRDLQMARFESE 197
Query: 489 LWRLVGQKCIEETDRSKSLDWDSGRTYIYRCYVDPDGSYTFKGPHLHLQKQKTHLQRVLG 668
+W +G+K I + DR SL WDSG+T++Y C++ G+ TFKGP+L+ + +THLQR LG
Sbjct: 198 VWEKLGRKNISQEDRRMSLKWDSGKTHMYHCHISTKGNCTFKGPYLN--QTRTHLQRELG 255
Query: 669 DDNVLDVRFAEEVVNR---NDFNRSNAGYQNIANEGIYVGLRRYQFFVFKDGGKEEKKKS 839
DDN+L V+F EE+ N++N S + Y IA EGI VGLR Y FFVFKDGGKEEKKK
Sbjct: 256 DDNILLVKFDEELGGHRSSNNWNDSYSKYNEIAREGILVGLRCYHFFVFKDGGKEEKKKD 315
Query: 840 LTSSPVKCYFVRMESNASIDAEKPYIFSNKSIHEARSVFMHVHTVSSVAKYMARFSLILS 1019
++SPVKCYFVRMES+A ID YI S K++HEAR +FMHV TVSSVA YM+R SLILS
Sbjct: 316 PSTSPVKCYFVRMESSAFIDMGYQYILSGKTVHEARYMFMHVRTVSSVANYMSRLSLILS 375
Query: 1020 KTLKLDVDHASVHIDTIEDIDCLDGDGRIIRNEDGEALIHTDGTGFISEDLALKCPRNVY 1199
KT+KL+VD + ++I+ IED C D DG ++ +DGEALIHTDGTGFISEDLALKCP VY
Sbjct: 376 KTMKLEVDFSRINIERIEDEPCRDKDGNVV-YKDGEALIHTDGTGFISEDLALKCPTYVY 434
Query: 1200 KGHYSSHGEFERNLDRIEFEDKSSELTKSTSHIREPPLLIQFRLFNNGRAVKGTFLVNKK 1379
K ++ ER++DR E E S++ ++ SH EPPLL+Q RLF NG AVKGT L+NKK
Sbjct: 435 KEKCTNDDSTERSIDRKELEANFSDVARTESHYGEPPLLMQVRLFYNGTAVKGTLLLNKK 494
Query: 1380 LPPKTIQIRPSMIKVDTDPKHLDTQTANSLEIVSTSNRPRKTSYLSRFLIAHLNYGGVPR 1559
LPP+TIQIRPSMIKV D D QT NSLE+V TSN+PRKT YLSR LIA L+YGGVP
Sbjct: 495 LPPQTIQIRPSMIKVKADRDLSDGQTFNSLEVVKTSNQPRKT-YLSRNLIALLSYGGVPE 553
Query: 1560 EYFMELLMNALEAAQSVHYNKSEALTVSLRYGEMD-DFLVPRMILCGIPLNEPYLQYRMS 1736
+F+++L NAL+ A+ V NK AL VS YG MD DF RMIL GI L+EPYLQ+R+S
Sbjct: 554 IFFLDILRNALDDARGVFSNKRNALKVSFNYGGMDYDFTSARMILSGISLDEPYLQHRLS 613
Query: 1737 VLLKEERKGLKVGKLPVSECYYLMGTADPTGMLNSDQVCIILDSGQIS-GKVLVYKHPGL 1913
+L+KEE+K L+ GKLPV+E YYLMGT DPTG+L S++VCIIL GQ+S KVLVY++PGL
Sbjct: 614 ILMKEEKKSLQAGKLPVTESYYLMGTVDPTGILKSNEVCIILKDGQVSWEKVLVYRNPGL 673
Query: 1914 HFGDIHVLTATYVKDLELIVGNAKYAIFFPTKGPRSLADEMANSDFDGDMYWVSRNPQLL 2093
HFGDIHVL ATYVK+LE VG +KYAIFFP GPRSLADE+A DFDGDMY+VSRNP+LL
Sbjct: 674 HFGDIHVLKATYVKELEDFVGTSKYAIFFPCNGPRSLADEIAGGDFDGDMYFVSRNPELL 733
Query: 2094 QYFQPSEPWKRPHSAKCVCHQKPTDFSTDELENVLFQQFLTARFPLSNTLGMAADSWLSF 2273
++F+ SE W S +++P DFS +ELE+ LF+ FL RF SN +AAD W +
Sbjct: 734 KHFKESERWMST-SKNLSANKRPIDFSLEELESELFKLFLNTRFCPSNAKSLAADCWQAV 792
Query: 2274 MDRVLTLGDECAAEKCRVKEKMLQLVDIYYDALDA-SKTGKKVEVPNELKADKFPHFMKR 2450
MDR LTLGDE A EK +KE ML+L++IYYDALDA K+G KVEVP +LK +KFP +M+R
Sbjct: 793 MDRFLTLGDESAEEKAAMKENMLRLINIYYDALDAPKKSGIKVEVPEDLKVEKFPCYMRR 852
Query: 2451 --ANSYYSKSILGLIYDKVDSFQATELPSKEVWKLPCFSGEAPVSCLKSWKDHYDHYRNE 2624
+ S+ S S+LG IY+ V S++A + E+WKLPCF P +C+ WK +YD YR E
Sbjct: 853 DESVSFESTSVLGTIYNTVKSYEAVDRSVTEIWKLPCFDDGVPEACMTKWKGYYDQYRWE 912
Query: 2625 MTHALKLDSESRQVAADEVIQKYKQKLYGAAEFEESARKQEEIFNEALAIYEISYDYAKK 2804
M A+ + R+ AA+ VI+KYKQ LYGAAEFE+S R EEI+NEALAIY I+YD A
Sbjct: 913 MKEAIDKCTVEREEAAELVIEKYKQILYGAAEFEQSTRTLEEIYNEALAIYNITYDLAAS 972
Query: 2805 INDVGKCSFAWRVAGRALCMLHASNQDKDTIVCVKSVLREV 2927
V CSFAWRVAG AL +A Q +++C SVLRE+
Sbjct: 973 RRQVSYCSFAWRVAGSALRKFYARRQGDRSMLCSASVLREI 1013
>ref|XP_006380470.1| hypothetical protein POPTR_0007s06560g [Populus trichocarpa]
gi|550334280|gb|ERP58267.1| hypothetical protein
POPTR_0007s06560g [Populus trichocarpa]
Length = 877
Score = 971 bits (2509), Expect = 0.0
Identities = 515/872 (59%), Positives = 638/872 (73%), Gaps = 10/872 (1%)
Frame = +3
Query: 345 HLLSLGELEFRKAFLILSYCGKKKLEESISVDLIQSMKNLPMTEFESQLWRLVG--QKCI 518
HL++LGELEFRKAFLILSY G K LEE +SVD I+ K+LPM FES++W G + I
Sbjct: 16 HLVALGELEFRKAFLILSYLGGKNLEEVVSVDQIRGYKDLPMRTFESKIWEAFGCRRDYI 75
Query: 519 EETDRSKSLDWDSGRTYIYRCYVDPDGSYTFKGPHLHLQKQKTHLQRVLGDDNVLDVRFA 698
+E DR K LDWDSG+T+IY C+VDPDGSY FKGP+L K + LQR LGDDN+L V+F
Sbjct: 76 KEEDRVKYLDWDSGKTHIYHCHVDPDGSYRFKGPYL--SKLRNVLQRTLGDDNILMVKFG 133
Query: 699 EEVVNRNDFNRSN----AGYQNIANEGIYVGLRRYQFFVFKDGGKEEKKKSLTSSPVKCY 866
E +R+ +RS + Y + EGI+VGLR Y+FFVFKDGGKEEKKK T+SPVKC+
Sbjct: 134 EVKDDRDSGSRSLDDYFSKYNKVLGEGIHVGLRCYRFFVFKDGGKEEKKKDPTTSPVKCF 193
Query: 867 FVRMESNASIDAEKPYIFSNKSIHEARSVFMHVHTVSSVAKYMARFSLILSKTLKLDVDH 1046
FVRMES ASID + I S K+I +ARSVFMHV +SS++ YMARFSLILSKT+ L+VD
Sbjct: 194 FVRMESVASID-NQDNILSGKTIRQARSVFMHVDNLSSLSNYMARFSLILSKTMNLEVDL 252
Query: 1047 ASVHIDTIEDIDCLDGDGRIIRNEDGEALIHTDGTGFISEDLALKCPRNVYKGHYSSHGE 1226
+ V I TI D C D DG ++ DG+ LIHTDGTGFIS DLALKCP+N +KG
Sbjct: 253 SCVDIKTIADEPCRDKDGNVVYGTDGKPLIHTDGTGFISHDLALKCPKNQFKGTCLRASN 312
Query: 1227 FERNLDRIEFEDKSSELTKSTSHIREPPLLIQFRLFNNGRAVKGTFLVNKKLPPKTIQIR 1406
ER E ++ E +PPLLIQFRLFNNGRAVKGTFLVNKKL +T+ IR
Sbjct: 313 IERLNVHNEVMEQYPECRNG-----DPPLLIQFRLFNNGRAVKGTFLVNKKLTHQTLHIR 367
Query: 1407 PSMIKVDTDPKHLDTQTANSLEIVSTSNRPRKTSYLSRFLIAHLNYGGVPREYFMELLMN 1586
PSMIKV+TDPK T + NSLEIV TS+RP+KT +LS+ LIA L+YGGVP E+FM ++ N
Sbjct: 368 PSMIKVETDPKLSSTFSKNSLEIVGTSSRPKKT-FLSKNLIALLSYGGVPEEFFMGIVNN 426
Query: 1587 ALEAAQSVHYNKSEALTVSLRYGEMDDFLVPRMILCGIPLNEPYLQYRMSVLLKEERKGL 1766
ALE A + NK+ AL V+L YG+MDD +V MI CGIPL EPYLQ R+S+L+KEE+K L
Sbjct: 427 ALEDAHGILSNKNAALRVALNYGDMDDNIVATMIGCGIPLEEPYLQCRLSILMKEEKKSL 486
Query: 1767 KVGKLPVSECYYLMGTADPTGMLNSDQVCIILDSGQISGKVLVYKHPGLHFGDIHVLTAT 1946
K GK+PV E YYLMGTADPTG+L SD+VCIILD GQISG+VL+Y++PGLHFGDIH+L AT
Sbjct: 487 KGGKIPVPESYYLMGTADPTGLLESDEVCIILDCGQISGEVLIYRNPGLHFGDIHILKAT 546
Query: 1947 YVKDLELIVGNAKYAIFFPTKGPRSLADEMANSDFDGDMYWVSRNPQLLQYFQPSEPWKR 2126
YV++LE VGNAKYAIFFP KGPRSLADEM+ DFDGDM++VSRNPQLL+ F+ +EPW
Sbjct: 547 YVRELEDFVGNAKYAIFFPCKGPRSLADEMSGGDFDGDMFFVSRNPQLLETFKQTEPWTP 606
Query: 2127 PHSAKCVCHQKPTDFSTDELENVLFQQFLTARFPLSNTLGMAADSWLSFMDRVLTLGDEC 2306
S V ++KP++FS +ELE LF+ FL RF S+T+G+AADSWL+ MDR+LTLG++C
Sbjct: 607 STSTPNVPNRKPSEFSDEELEVELFKLFLRNRFQPSSTVGVAADSWLAMMDRLLTLGNDC 666
Query: 2307 AAEKCRVKEKMLQLVDIYYDALDA-SKTGKKVEVPNELKADKFPHFM--KRANSYYSKSI 2477
A E +KE + L+DIYYDALDA K G+++EVP LKA+ FPHFM +Y S SI
Sbjct: 667 AEEIVCMKENINLLIDIYYDALDAPKKGGRRIEVPEGLKAELFPHFMGKNEKKTYRSTSI 726
Query: 2478 LGLIYDKVDSFQATELPSKEVWKLPCFSGEAPVSCLKSWKDHYDHYRNEMTHALKLDSES 2657
LG IYDKV +++ +L S +VWKLPCF E L WK+ Y YR EM +ALK ES
Sbjct: 727 LGKIYDKVKAYEDMDLSSNDVWKLPCFDDEVHELYLVKWKELYGQYRKEMRNALKAGEES 786
Query: 2658 RQVAADEVIQKYKQKLYGAAEFEESARKQEEIFNEALAIYEISYDYAKKINDVGKCSFAW 2837
A+EVI+KYK+ LY AAEF S R+ EEIF EA+A+Y++SY++AK VG CSFAW
Sbjct: 787 ND-KANEVIRKYKEFLYEAAEFNLSKRRDEEIFEEAMALYQVSYNHAKSQGVVGNCSFAW 845
Query: 2838 RVAGRALCMLHA-SNQDKDTIVCVKSVLREVL 2930
RVAG ALC L+ NQ + ++C S L+ +L
Sbjct: 846 RVAGLALCTLYVLKNQGERPMICSPSALKGIL 877
>ref|XP_006380469.1| hypothetical protein POPTR_0007s06560g [Populus trichocarpa]
gi|550334279|gb|ERP58266.1| hypothetical protein
POPTR_0007s06560g [Populus trichocarpa]
Length = 899
Score = 971 bits (2509), Expect = 0.0
Identities = 515/872 (59%), Positives = 638/872 (73%), Gaps = 10/872 (1%)
Frame = +3
Query: 345 HLLSLGELEFRKAFLILSYCGKKKLEESISVDLIQSMKNLPMTEFESQLWRLVG--QKCI 518
HL++LGELEFRKAFLILSY G K LEE +SVD I+ K+LPM FES++W G + I
Sbjct: 38 HLVALGELEFRKAFLILSYLGGKNLEEVVSVDQIRGYKDLPMRTFESKIWEAFGCRRDYI 97
Query: 519 EETDRSKSLDWDSGRTYIYRCYVDPDGSYTFKGPHLHLQKQKTHLQRVLGDDNVLDVRFA 698
+E DR K LDWDSG+T+IY C+VDPDGSY FKGP+L K + LQR LGDDN+L V+F
Sbjct: 98 KEEDRVKYLDWDSGKTHIYHCHVDPDGSYRFKGPYL--SKLRNVLQRTLGDDNILMVKFG 155
Query: 699 EEVVNRNDFNRSN----AGYQNIANEGIYVGLRRYQFFVFKDGGKEEKKKSLTSSPVKCY 866
E +R+ +RS + Y + EGI+VGLR Y+FFVFKDGGKEEKKK T+SPVKC+
Sbjct: 156 EVKDDRDSGSRSLDDYFSKYNKVLGEGIHVGLRCYRFFVFKDGGKEEKKKDPTTSPVKCF 215
Query: 867 FVRMESNASIDAEKPYIFSNKSIHEARSVFMHVHTVSSVAKYMARFSLILSKTLKLDVDH 1046
FVRMES ASID + I S K+I +ARSVFMHV +SS++ YMARFSLILSKT+ L+VD
Sbjct: 216 FVRMESVASID-NQDNILSGKTIRQARSVFMHVDNLSSLSNYMARFSLILSKTMNLEVDL 274
Query: 1047 ASVHIDTIEDIDCLDGDGRIIRNEDGEALIHTDGTGFISEDLALKCPRNVYKGHYSSHGE 1226
+ V I TI D C D DG ++ DG+ LIHTDGTGFIS DLALKCP+N +KG
Sbjct: 275 SCVDIKTIADEPCRDKDGNVVYGTDGKPLIHTDGTGFISHDLALKCPKNQFKGTCLRASN 334
Query: 1227 FERNLDRIEFEDKSSELTKSTSHIREPPLLIQFRLFNNGRAVKGTFLVNKKLPPKTIQIR 1406
ER E ++ E +PPLLIQFRLFNNGRAVKGTFLVNKKL +T+ IR
Sbjct: 335 IERLNVHNEVMEQYPECRNG-----DPPLLIQFRLFNNGRAVKGTFLVNKKLTHQTLHIR 389
Query: 1407 PSMIKVDTDPKHLDTQTANSLEIVSTSNRPRKTSYLSRFLIAHLNYGGVPREYFMELLMN 1586
PSMIKV+TDPK T + NSLEIV TS+RP+KT +LS+ LIA L+YGGVP E+FM ++ N
Sbjct: 390 PSMIKVETDPKLSSTFSKNSLEIVGTSSRPKKT-FLSKNLIALLSYGGVPEEFFMGIVNN 448
Query: 1587 ALEAAQSVHYNKSEALTVSLRYGEMDDFLVPRMILCGIPLNEPYLQYRMSVLLKEERKGL 1766
ALE A + NK+ AL V+L YG+MDD +V MI CGIPL EPYLQ R+S+L+KEE+K L
Sbjct: 449 ALEDAHGILSNKNAALRVALNYGDMDDNIVATMIGCGIPLEEPYLQCRLSILMKEEKKSL 508
Query: 1767 KVGKLPVSECYYLMGTADPTGMLNSDQVCIILDSGQISGKVLVYKHPGLHFGDIHVLTAT 1946
K GK+PV E YYLMGTADPTG+L SD+VCIILD GQISG+VL+Y++PGLHFGDIH+L AT
Sbjct: 509 KGGKIPVPESYYLMGTADPTGLLESDEVCIILDCGQISGEVLIYRNPGLHFGDIHILKAT 568
Query: 1947 YVKDLELIVGNAKYAIFFPTKGPRSLADEMANSDFDGDMYWVSRNPQLLQYFQPSEPWKR 2126
YV++LE VGNAKYAIFFP KGPRSLADEM+ DFDGDM++VSRNPQLL+ F+ +EPW
Sbjct: 569 YVRELEDFVGNAKYAIFFPCKGPRSLADEMSGGDFDGDMFFVSRNPQLLETFKQTEPWTP 628
Query: 2127 PHSAKCVCHQKPTDFSTDELENVLFQQFLTARFPLSNTLGMAADSWLSFMDRVLTLGDEC 2306
S V ++KP++FS +ELE LF+ FL RF S+T+G+AADSWL+ MDR+LTLG++C
Sbjct: 629 STSTPNVPNRKPSEFSDEELEVELFKLFLRNRFQPSSTVGVAADSWLAMMDRLLTLGNDC 688
Query: 2307 AAEKCRVKEKMLQLVDIYYDALDA-SKTGKKVEVPNELKADKFPHFM--KRANSYYSKSI 2477
A E +KE + L+DIYYDALDA K G+++EVP LKA+ FPHFM +Y S SI
Sbjct: 689 AEEIVCMKENINLLIDIYYDALDAPKKGGRRIEVPEGLKAELFPHFMGKNEKKTYRSTSI 748
Query: 2478 LGLIYDKVDSFQATELPSKEVWKLPCFSGEAPVSCLKSWKDHYDHYRNEMTHALKLDSES 2657
LG IYDKV +++ +L S +VWKLPCF E L WK+ Y YR EM +ALK ES
Sbjct: 749 LGKIYDKVKAYEDMDLSSNDVWKLPCFDDEVHELYLVKWKELYGQYRKEMRNALKAGEES 808
Query: 2658 RQVAADEVIQKYKQKLYGAAEFEESARKQEEIFNEALAIYEISYDYAKKINDVGKCSFAW 2837
A+EVI+KYK+ LY AAEF S R+ EEIF EA+A+Y++SY++AK VG CSFAW
Sbjct: 809 ND-KANEVIRKYKEFLYEAAEFNLSKRRDEEIFEEAMALYQVSYNHAKSQGVVGNCSFAW 867
Query: 2838 RVAGRALCMLHA-SNQDKDTIVCVKSVLREVL 2930
RVAG ALC L+ NQ + ++C S L+ +L
Sbjct: 868 RVAGLALCTLYVLKNQGERPMICSPSALKGIL 899
>ref|XP_006853665.1| hypothetical protein AMTR_s00056p00110240 [Amborella trichopoda]
gi|548857326|gb|ERN15132.1| hypothetical protein
AMTR_s00056p00110240 [Amborella trichopoda]
Length = 988
Score = 945 bits (2443), Expect = 0.0
Identities = 515/991 (51%), Positives = 673/991 (67%), Gaps = 15/991 (1%)
Frame = +3
Query: 3 ICEEQSLLSPDIRARRELSLLGEEASLQLL-----QRTRNLSDYIIYMAG----VSDPVS 155
IC QS+ +RAR L+ +GE +++ LL Q+ R+ S +IIYM D +S
Sbjct: 35 ICRYQSVQPASMRAREMLASIGESSAMNLLNWISTQKIRDFSAFIIYMVKNMNRPPDVLS 94
Query: 156 SQEXXXXXXXXXXXXXXXXXXXXXXTKLPFSNLEEPKPKGQMNLNXXXXXXXXXXXXXXX 335
S + NLE N
Sbjct: 95 STDDVCECAP---------------------NLEPSSLMNDFRCNTYGSNEFQFRK---- 129
Query: 336 XXXHLLSLGELEFRKAFLILSYCGKKKLEESISVDLIQSMKNLPMTEFESQLWRLVGQKC 515
+LGELEFRKAFLIL+Y GK+++++ +S++ I++ K+L M FE ++WR VG++
Sbjct: 130 ------ALGELEFRKAFLILNYIGKQRIDDVLSIEKIRTWKDLSMQCFEYEVWRTVGERY 183
Query: 516 IEETDRSKSLDWDSGRTYIYRCYVDPDGSYTFKGPHLHLQKQKTHLQRVLGDDNVLDVRF 695
+TDR ++LDWDSG+ Y+C+VDP G+++FKGP L + +THL+RVLGDD VL V+F
Sbjct: 184 ASQTDR-RNLDWDSGKAENYQCHVDPVGNFSFKGPFL--ESTQTHLRRVLGDDKVLTVKF 240
Query: 696 AEEVVN--RNDFN--RSNAGYQNIANEGIYVGLRRYQFFVFKDGGKEEKKKSLTSSPVKC 863
AEE+V+ R +FN RS ++ IA +GI VGLRRY FFVFKDGGKEEK+K+ ++ VKC
Sbjct: 241 AEEMVDERRGEFNLSRSKNIFRRIAKDGILVGLRRYHFFVFKDGGKEEKRKNANTTGVKC 300
Query: 864 YFVRMESNASIDAEKPYIFSNKSIHEARSVFMHVHTVSSVAKYMARFSLILSKTLKLDVD 1043
YFV M+S+A D PYI SNK+I EARS+FM VHTV ++AKYMARFSLILSKT+KL+VD
Sbjct: 301 YFVCMKSDAESDMHTPYILSNKTIQEARSMFMDVHTVPNLAKYMARFSLILSKTIKLEVD 360
Query: 1044 HASVHIDTIEDIDCLDGDGRIIRNEDGEALIHTDGTGFISEDLALKCPRNVYKGHYSSHG 1223
SV+I+ I D CLD I+ +++G+ LIHTDGTGFISEDL K +N++K Y
Sbjct: 361 LGSVNIERINDKPCLDNHNEIVYDQNGQCLIHTDGTGFISEDLMSKFSKNIFKERYLKQK 420
Query: 1224 EFERNLDRIEFEDKSSELTKSTSHIR-EPPLLIQFRLFNNGRAVKGTFLVNKKLPPKTIQ 1400
+ E L+ +E KS L + ++ + LLIQFRLF +G AVKGT LVNK LPP TIQ
Sbjct: 421 KVETCLNGMELNAKSV-LDEEIKYVSGDLHLLIQFRLFYDGCAVKGTVLVNKLLPPNTIQ 479
Query: 1401 IRPSMIKVDTDPKHLDTQTANSLEIVSTSNRPRKTSYLSRFLIAHLNYGGVPREYFMELL 1580
+RPSM+KV+ D + NS E+V TSNRPR + LSR+LI L++GGVP+ FM L+
Sbjct: 480 VRPSMVKVERDTDFSRLPSFNSFEMVGTSNRPRGAA-LSRYLITLLSHGGVPKSCFMFLI 538
Query: 1581 MNALEAAQSVHYNKSEALTVSLRYGEM-DDFLVPRMILCGIPLNEPYLQYRMSVLLKEER 1757
AL+ Q+V Y+K ALT +++Y E+ D+ LV RMI CG+PL EPYLQ+R+S+L+KEER
Sbjct: 539 QAALDDVQNVRYSKKLALTAAVKYQEISDNLLVARMIFCGLPLEEPYLQHRLSILMKEER 598
Query: 1758 KGLKVGKLPVSECYYLMGTADPTGMLNSDQVCIILDSGQISGKVLVYKHPGLHFGDIHVL 1937
KGLK GK+ + YYLMGTADPTG L ++VCIILD GQISGKVLVY+HPGLHFGDIHV
Sbjct: 599 KGLKEGKVLLPNSYYLMGTADPTGKLKGNEVCIILDHGQISGKVLVYRHPGLHFGDIHVF 658
Query: 1938 TATYVKDLELIVGNAKYAIFFPTKGPRSLADEMANSDFDGDMYWVSRNPQLLQYFQPSEP 2117
TATY++DL IVGNAK+AIFF T+GPRS ADE+AN DFDGDMYW+S NP+LL YF+ P
Sbjct: 659 TATYIEDLVEIVGNAKFAIFFSTQGPRSAADEIANGDFDGDMYWISTNPELLHYFKAGPP 718
Query: 2118 WKRPHSAKCVCHQKPTDFSTDELENVLFQQFLTARFPLSNTLGMAADSWLSFMDRVLTLG 2297
W+R S K +KP ++S DELE LF FL +RF S AADSWL +MDR+LTLG
Sbjct: 719 WERSSSEKPPPQRKPIEYSPDELETELFDLFLESRFHPSIAKCAAADSWLVYMDRLLTLG 778
Query: 2298 DECAAEKCRVKEKMLQLVDIYYDALDASKTGKKVEVPNELKADKFPHFMKRANSYYSKSI 2477
DECA EK + +KML+L D+YY+A+DA K+GKKVEVP +LK +++PHFM+R Y S SI
Sbjct: 779 DECAEEKGCLHQKMLKLADLYYEAVDAPKSGKKVEVPKDLKPERYPHFMERTYQYTSTSI 838
Query: 2478 LGLIYDKVDSFQATELPSKEVWKLPCFSGEAPVSCLKSWKDHYDHYRNEMTHALKLDSES 2657
LG IYD V S Q ++P +++ LPCF E S ++ WK Y YR+EM AL ++
Sbjct: 839 LGQIYDLVASAQ-MDVPCEDIELLPCFLEEVEPSGMEKWKGLYAQYRDEMNKALS-STDQ 896
Query: 2658 RQVAADEVIQKYKQKLYGAAEFEESARKQEEIFNEALAIYEISYDYAKKINDVGKCSFAW 2837
++ ADEVIQ YK+ LYGA E+EE R +EEIF EA IY ISY YAK+ +D+ KC FAW
Sbjct: 897 KKSNADEVIQNYKKILYGAQEYEERTRPREEIFREACEIYAISYFYAKEKSDIAKCGFAW 956
Query: 2838 RVAGRALCMLHASNQDKDTIVCVKSVLREVL 2930
+VAG ALC LHA Q K++I C+ SVL+E+L
Sbjct: 957 KVAGCALCELHALKQKKNSITCLSSVLQELL 987
>ref|XP_006381765.1| hypothetical protein POPTR_0006s17780g [Populus trichocarpa]
gi|550336519|gb|ERP59562.1| hypothetical protein
POPTR_0006s17780g [Populus trichocarpa]
Length = 866
Score = 927 bits (2396), Expect = 0.0
Identities = 498/872 (57%), Positives = 622/872 (71%), Gaps = 10/872 (1%)
Frame = +3
Query: 345 HLLSLGELEFRKAFLILSYCGKKKLEESISVDLIQSMKNLPMTEFESQLWRLVG--QKCI 518
HL++LGELEFRKAFLIL+Y G K LEE +S D I+ K+LPM FES++W G + I
Sbjct: 16 HLVALGELEFRKAFLILNYLGGKNLEEVVSADQIRGYKDLPMETFESKIWDAFGCRRDYI 75
Query: 519 EETDRSKSLDWDSGRTYIYRCYVDPDGSYTFKGPHLHLQKQKTHLQRVLGDDNVLDVRFA 698
+E DR K LDWDSG+ +IY C+VDPDGSY FKGP+L KQ+ LQR LGDDN+L V+F
Sbjct: 76 KEEDRVKYLDWDSGKAHIYHCHVDPDGSYRFKGPYL--SKQRNVLQRTLGDDNILMVKFE 133
Query: 699 EEVVNRNDFNRSN----AGYQNIANEGIYVGLRRYQFFVFKDGGKEEKKKSLTSSPVKCY 866
E R + S A Y + EGI+VGLR Y+FFVFKDGGKEEKKK T+SPVKC+
Sbjct: 134 EVKDERYSVSSSLDNYFAKYNKVLREGIHVGLRCYRFFVFKDGGKEEKKKDPTTSPVKCF 193
Query: 867 FVRMESNASIDAEKPYIFSNKSIHEARSVFMHVHTVSSVAKYMARFSLILSKTLKLDVDH 1046
FV MES AS+D + I K+I +ARSVFMHV +SS++ YMARFSLILSKT+ L+VD
Sbjct: 194 FVCMESVASVD-NQDNILCGKTIRQARSVFMHVDNLSSLSNYMARFSLILSKTMNLEVDL 252
Query: 1047 ASVHIDTIEDIDCLDGDGRIIRNEDGEALIHTDGTGFISEDLALKCPRNVYKGHYSSHGE 1226
+ V I I D C D DG + DG+ LIHTDGTGFIS DLALKCP+N KG
Sbjct: 253 SFVDIKPIADEPCRDKDGNAVYGTDGKPLIHTDGTGFISHDLALKCPKNQVKGTCLQAS- 311
Query: 1227 FERNLDRIEFEDKSSELTKSTSHIREPPLLIQFRLFNNGRAVKGTFLVNKKLPPKTIQIR 1406
N++R+ ++ E H +PPLLIQFRLFNNGRAVKGTFLVNKKL +T+ +R
Sbjct: 312 ---NIERLRVHNEVMEQNPECLH-GDPPLLIQFRLFNNGRAVKGTFLVNKKLNHRTLHVR 367
Query: 1407 PSMIKVDTDPKHLDTQTANSLEIVSTSNRPRKTSYLSRFLIAHLNYGGVPREYFMELLMN 1586
PSMIKV+TDPK +T + NSLEIV TS RP+KT +LS+ LIA L+YGGVP E+FM +L N
Sbjct: 368 PSMIKVETDPKLSNTFSKNSLEIVGTSCRPKKT-FLSKNLIALLSYGGVPEEFFMGILNN 426
Query: 1587 ALEAAQSVHYNKSEALTVSLRYGEMDDFLVPRMILCGIPLNEPYLQYRMSVLLKEERKGL 1766
ALE A + NK AL V+L YG+MDD +V MI CGIPL EPYLQ+ +S+L KEE+K L
Sbjct: 427 ALEDAHGILSNKKAALRVALNYGDMDDNIVATMIGCGIPLEEPYLQHHLSILKKEEKKSL 486
Query: 1767 KVGKLPVSECYYLMGTADPTGMLNSDQVCIILDSGQISGKVLVYKHPGLHFGDIHVLTAT 1946
K GK+PV E YYLMGTADPTG+L SD+VCIILD GQ+SG+VLVY++PGLHFGDIH+L AT
Sbjct: 487 KGGKIPVPESYYLMGTADPTGLLESDEVCIILDCGQVSGEVLVYRNPGLHFGDIHILKAT 546
Query: 1947 YVKDLELIVGNAKYAIFFPTKGPRSLADEMANSDFDGDMYWVSRNPQLLQYFQPSEPWKR 2126
YV++LE VGNAKYAIFFP KGPRSLADEM+ DFDGDM++VSRNP+LL+ F+ +EPW
Sbjct: 547 YVRELEDFVGNAKYAIFFPCKGPRSLADEMSGGDFDGDMFFVSRNPRLLENFKQTEPWTP 606
Query: 2127 PHSAKCVCHQKPTDFSTDELENVLFQQFLTARFPLSNTLGMAADSWLSFMDRVLTLGDEC 2306
S V ++KP++FS +ELE LF+ FL RF S T+G+AADSWL+ MDR+LTLG++C
Sbjct: 607 STSTPNVPNRKPSEFSDEELEVELFKLFLRNRFQPSFTVGVAADSWLAMMDRLLTLGNDC 666
Query: 2307 AAEKCRVKEKMLQLVDIYYDALDA-SKTGKKVEVPNELKADKFPHFMKR--ANSYYSKSI 2477
E VK+ + L+DIYYDALDA K G+K+EVP LKA+ FPHFM++ +Y S SI
Sbjct: 667 TEEIACVKKNINLLIDIYYDALDAPKKGGRKIEVPEALKAELFPHFMEKHEKKTYRSTSI 726
Query: 2478 LGLIYDKVDSFQATELPSKEVWKLPCFSGEAPVSCLKSWKDHYDHYRNEMTHALKLDSES 2657
LG IYDKV +++ +L S SCL WK Y YR EM +AL+ E
Sbjct: 727 LGKIYDKVKAYEDMDL-----------SSNVHESCLVKWKGLYGQYRTEMRNALQAGKEK 775
Query: 2658 RQVAADEVIQKYKQKLYGAAEFEESARKQEEIFNEALAIYEISYDYAKKINDVGKCSFAW 2837
A+EVI+KYK+ LY AAEF S R+ EEIF EA A+Y+++Y++AK+ VGKC FAW
Sbjct: 776 NN-EANEVIKKYKEILYEAAEFNLSRRRDEEIFEEARALYQVTYNHAKRQGAVGKCGFAW 834
Query: 2838 RVAGRALCMLHA-SNQDKDTIVCVKSVLREVL 2930
RVAG ALC L+ NQ++ ++C S L+ +L
Sbjct: 835 RVAGLALCTLYVLKNQEERPLICSPSALKGIL 866
>ref|XP_002883963.1| RNA-dependent RNA polymerase family protein [Arabidopsis lyrata
subsp. lyrata] gi|297329803|gb|EFH60222.1| RNA-dependent
RNA polymerase family protein [Arabidopsis lyrata subsp.
lyrata]
Length = 981
Score = 900 bits (2326), Expect = 0.0
Identities = 468/867 (53%), Positives = 620/867 (71%), Gaps = 7/867 (0%)
Frame = +3
Query: 348 LLSLGELEFRKAFLILSYCGKKKLEESISVDLIQSMKNLPMTEFESQLWRLVGQKCIEET 527
L++LGELEF+KAFL+LSY ++L + + D I+ K+LPM +E+ +W +G++ +T
Sbjct: 141 LVALGELEFKKAFLLLSYIPGQQLGQVTTADEIRLWKDLPMVAYEAAVWDRLGRRYCPQT 200
Query: 528 DRSKSLDWDSGRTYIYRCYVDPDGSYTFKGPHLHLQKQKTHLQRVLGDDNVLDVRFAEEV 707
DR + L WDSG+T+ Y+C+V PDGSYTFKGP L + THL +VLGD+NVL V+FA+
Sbjct: 201 DR-RMLQWDSGKTHYYQCHVAPDGSYTFKGPLL--EHTGTHLHKVLGDENVLTVKFADVP 257
Query: 708 VNRNDFNRSNA-GYQNIANEGIYVGLRRYQFFVFKDGGKEEKKKSLTSSPVKCYFVRMES 884
N + ++ Y+ IA GI +GLRRYQFFVFKDGGKEEKKK L++ VKCYF+R +S
Sbjct: 258 KNSSTYSNDRYFTYKEIAKNGIMIGLRRYQFFVFKDGGKEEKKKDLSTKKVKCYFIRTDS 317
Query: 885 NASIDAEKPYIFSNKSIHEARSVFMHVHTVSSVAKYMARFSLILSKTLKLDVDHASVHID 1064
AS D E PYIF+ KSIHEAR FMHVH ++A YMARFSLILSKT L+VD + D
Sbjct: 318 TASCDMENPYIFTGKSIHEARMHFMHVHRAPTLANYMARFSLILSKTKTLEVDMTGITFD 377
Query: 1065 TIEDIDCLDGDGRIIRNEDGEALIHTDGTGFISEDLALKCPRNVYKGHYSSHGEFERNLD 1244
I+DI C D DG+ + +++ + IH+DGTG+ISEDLA CP N++KG
Sbjct: 378 PIDDIHCHDQDGKDVLDKNKKPCIHSDGTGYISEDLARMCPLNIFKGKCL---------- 427
Query: 1245 RIEFEDKSSELTKSTSHIREPPLLIQFRLFNNGRAVKGTFLVNKKLPPKTIQIRPSMIKV 1424
+S + ++ + ++PPLLIQFR+F +G AVKGTFL+NKKL P+T+Q+RPSMIKV
Sbjct: 428 ------RSENIQEACN--QDPPLLIQFRMFYDGYAVKGTFLLNKKLCPRTVQVRPSMIKV 479
Query: 1425 DTDPKHLDTQTANSLEIVSTSNRPRKTSYLSRFLIAHLNYGGVPREYFMELLMNALEAAQ 1604
DP + T N+LE+V+TSN PR+T LS+ L+A L+YGG+P E+F+++L+N LE ++
Sbjct: 480 SKDPSLSNFSTFNALEVVTTSNPPRRTK-LSKNLVALLSYGGIPNEFFLDILLNTLEESK 538
Query: 1605 SVHYNKSEALTVSLRYGEMDDFLVPRMILCGIPLNEPYLQYRMSVLLKEERKGLKVGKLP 1784
S+ YNK AL V+L YGEMDD +MIL GIPL+EP+L+ +S+LLK E+ LK G+LP
Sbjct: 539 SIFYNKHAALNVALNYGEMDDQNAAQMILVGIPLDEPHLKNHLSILLKTEKNDLKAGRLP 598
Query: 1785 VSECYYLMGTADPTGMLNSDQVCIILDSGQISGKVLVYKHPGLHFGDIHVLTATYVKDLE 1964
V+E YYLMGT DPTG L D+VC+IL+SGQISG+VLVY++PGLHFGDIH+L ATYVK LE
Sbjct: 599 VTESYYLMGTVDPTGELKEDEVCVILESGQISGEVLVYRNPGLHFGDIHILKATYVKALE 658
Query: 1965 LIVGNAKYAIFFPTKGPRSLADEMANSDFDGDMYWVSRNPQLLQYFQPSEPW-KRPHSAK 2141
VGN+KYA+FFP KGPRSL DE+A DFDGDMY++SRNP+LL++F+PSEPW +K
Sbjct: 659 EYVGNSKYAVFFPQKGPRSLGDEIAGGDFDGDMYFISRNPELLEHFKPSEPWVSLTPPSK 718
Query: 2142 CVCHQKPTDFSTDELENVLFQQFLTARFPLSNTLGMAADSWLSFMDRVLTLGDECAAEKC 2321
+ P+ S +ELE LF+ FL A F SN +G+AADSWL+ MDR+L LGDE A EK
Sbjct: 719 SNSGRAPSQLSPEELEEELFEMFLKAGFHASNVIGIAADSWLTIMDRLLILGDERAEEKA 778
Query: 2322 RVKEKMLQLVDIYYDALDASKTGKKVEVPNELKADKFPHFMKRANSYYSKSILGLIYDKV 2501
+K+KML+L+DIYYDALDA K G KV +PNEL+ D FPH+M+R + S SILGLIYD V
Sbjct: 779 EMKKKMLKLIDIYYDALDAPKKGDKVYLPNELRPDIFPHYMEREKKFKSTSILGLIYDFV 838
Query: 2502 DSFQATE--LPSKEVWKLPCFSGEAPVS--CLKSWKDHYDHYRNEMTHALKLDSESRQVA 2669
S Q TE PS E+ KLPCF E PVS ++ + YD+YR+EMT A+K D + +
Sbjct: 839 KS-QTTEEPTPSSEISKLPCFEDE-PVSEFHMEKCRRWYDNYRSEMTQAMKTDKDE---S 893
Query: 2670 ADEVIQKYKQKLYGAAEFEESARKQEEIFNEALAIYEISYDYAKKINDVGKCSFAWRVAG 2849
A+EVIQ+YKQ+ YGAA FE+S + EE++ +AL +Y+I YDYA V KC F W+VAG
Sbjct: 894 ANEVIQRYKQEFYGAAGFEDSKKSLEELYPQALTLYKIVYDYAIHAG-VSKCGFVWKVAG 952
Query: 2850 RALCMLH-ASNQDKDTIVCVKSVLREV 2927
LC + + ++VC SVL+E+
Sbjct: 953 PVLCRFYLMKKMQEKSLVCAPSVLKEL 979
>ref|XP_004135802.1| PREDICTED: probable RNA-dependent RNA polymerase 5-like [Cucumis
sativus]
Length = 1056
Score = 895 bits (2314), Expect = 0.0
Identities = 485/876 (55%), Positives = 612/876 (69%), Gaps = 17/876 (1%)
Frame = +3
Query: 351 LSLGELEFRKAFLILSYCGKKKLEESISVDLIQSMKNLPMTEFESQLWRLVGQKCIEETD 530
++LGELEFRK L+ K P + +Q+ R +G + + T
Sbjct: 207 VALGELEFRKITLL---------------------KKRPWLLYGNQVERWLGWELVSVT- 244
Query: 531 RSKSL--------DWDSGRTYIYRCYVDPDGSYTFKGPHLHLQKQKTHLQRVLGDDNVLD 686
S+SL DWD +T+IY C+V DGS FKGP L+ KTHLQRVLGDDNVL
Sbjct: 245 HSESLPSYLVQYVDWDRRKTHIYHCHVALDGSCRFKGPFLN--NTKTHLQRVLGDDNVLM 302
Query: 687 VRFAEEVVNRNDFNRSNAG---YQNIANEGIYVGLRRYQFFVFKDGGKEEKKKSLTSSPV 857
V+FAE+ + N S Y IA +GI +GLRRY FFVFKDGGKEEKKK+ T+S V
Sbjct: 303 VKFAEDKSDTPLSNHSGGSFYAYSKIARDGILLGLRRYHFFVFKDGGKEEKKKNPTTSAV 362
Query: 858 KCYFVRMESNASIDAEKPYIFSNKSIHEARSVFMHVHTVSSVAKYMARFSLILSKTLKLD 1037
KCYFVRMES+A ID +PY SN+++ EARS+FMH H VSS+A YMARFSLILSKT+ L
Sbjct: 363 KCYFVRMESDAYIDKIEPYKLSNRTVFEARSLFMHAHMVSSIASYMARFSLILSKTINLK 422
Query: 1038 VDHASVHIDTIEDIDCLDGDGRIIRNEDGEALIHTDGTGFISEDLALKCPRNVYKGHYSS 1217
+D ++V++ I DI C D G +I DG+ LIHTDGTGFISEDLAL+CP NV+KG
Sbjct: 423 IDLSTVNVQRIGDIPCKDIYGNVIYR-DGKPLIHTDGTGFISEDLALECPMNVFKGQAKH 481
Query: 1218 HGEFERNLDRIE----FEDKSSELTKSTSHIREPPLLIQFRLFNNGRAVKGTFLVNKKLP 1385
+ + RI F++K+ +LT +REPPLLIQFRLF NG AVKGTFL+NK+LP
Sbjct: 482 DADLKAIWQRIPAFEGFQNKTLQLTLPGLELREPPLLIQFRLFYNGLAVKGTFLLNKQLP 541
Query: 1386 PKTIQIRPSMIKVDTDPKHLDTQTANSLEIVSTSNRPRKTSYLSRFLIAHLNYGGVPREY 1565
P+TIQIR SMIKV+ DP + +T NSLE+V TSN P++T +LSR LIA LNYGGVPREY
Sbjct: 542 PRTIQIRDSMIKVEIDPDLENFETENSLELVGTSNPPKRT-FLSRNLIALLNYGGVPREY 600
Query: 1566 FMELLMNALEAAQSVHYNKSEALTVSLRYGEMDDFLVPRMILCGIPLNEPYLQYRMSVLL 1745
FM +L++AL+ Q V +K AL VS+ GEMDDFLV RMIL GIPL+E YLQYR+SVLL
Sbjct: 601 FMNILVDALKDVQGVFSSKRAALRVSINNGEMDDFLVARMILAGIPLDESYLQYRLSVLL 660
Query: 1746 KEERKGLKVGKLPVSECYYLMGTADPTGMLNSDQVCIILDSGQISGKVLVYKHPGLHFGD 1925
KEE+K LK G+L V ECYYLMGT DPT L S +VC+IL +GQI+GKVLVY++PGLHFGD
Sbjct: 661 KEEKKSLKSGRLHVPECYYLMGTVDPTFTLESGEVCVILYNGQINGKVLVYRNPGLHFGD 720
Query: 1926 IHVLTATYVKDLELIVGNAKYAIFFPTKGPRSLADEMANSDFDGDMYWVSRNPQLLQYFQ 2105
IHVLTA YV+ L +VGNAKYAIFF +KGPRS+ADE+A DFDGDMYWVSRN QLL+YF+
Sbjct: 721 IHVLTAKYVEKLVPVVGNAKYAIFFSSKGPRSVADEIAGGDFDGDMYWVSRNSQLLEYFR 780
Query: 2106 PSEPWKRPHSAKCVCHQKPTDFSTDELENVLFQQFLTARFPLSNTLGMAADSWLSFMDRV 2285
P EPW+ S + V ++KP +FS DELEN LF+ FL+ RF S +AAD+WL+ MD+
Sbjct: 781 PCEPWRPSPSTEVVTNKKPKEFSADELENELFKLFLSTRFQPSYAKSVAADNWLALMDQF 840
Query: 2286 LTLGDECAAEKCRVKEKMLQLVDIYYDALDA-SKTGKKVEVPNELKADKFPHFMKRA-NS 2459
L LG+E E+ ++ K+LQL++IYYDALDA K GKK+EVP LKA PHFM+R NS
Sbjct: 841 LMLGEERKEERNCIRAKILQLINIYYDALDAPKKGGKKIEVPKHLKAGTLPHFMERGKNS 900
Query: 2460 YYSKSILGLIYDKVDSFQATELPSKEVWKLPCFSGEAPVSCLKSWKDHYDHYRNEMTHAL 2639
Y S SILG I+D + +Q E+P+ EV KLPCF E P WK Y+ YR +M A+
Sbjct: 901 YVSTSILGQIFDTANMYQ-EEVPNIEVQKLPCFEEELPEYIFMKWKFLYELYRKDMVDAM 959
Query: 2640 KLDSESRQVAADEVIQKYKQKLYGAAEFEESARKQEEIFNEALAIYEISYDYAKKINDVG 2819
+LD +++ +AA+ I+KYK+ LYGA E E S R EE++ EALAIY+++YD+A V
Sbjct: 960 QLDPDAKNIAAEATIKKYKEILYGAEELEGSPRSNEEVYQEALAIYQVTYDHAMS-RSVR 1018
Query: 2820 KCSFAWRVAGRALCMLHASNQDKDTIVCVKSVLREV 2927
C FAW+VAG AL L+A + + C+ SV+RE+
Sbjct: 1019 NCGFAWKVAGSALFKLYAIKHSERSFHCLPSVMREI 1054
>ref|XP_004288887.1| PREDICTED: probable RNA-dependent RNA polymerase 3-like [Fragaria
vesca subsp. vesca]
Length = 1405
Score = 890 bits (2299), Expect = 0.0
Identities = 480/868 (55%), Positives = 601/868 (69%), Gaps = 6/868 (0%)
Frame = +3
Query: 345 HLLSLGELEFRKAFLILSYCGKKKLEESISVDLIQSMKNLPMTEFESQLWRLVGQKCIEE 524
HL +LGELE+R+ FLILSY G KL + I + I+ K+LPM FES +W +G+KCI
Sbjct: 547 HLAALGELEYRRQFLILSYAGGMKLRDLIVAEAIRHWKDLPMVMFESTVWEHLGRKCIST 606
Query: 525 TDRSKSLDWDSGRTYIYRCYVDPDGSYTFKGPHLHLQKQKTHLQRVLGDDNVLDVRFAEE 704
DR DWDSG T++Y CYV+ DGSY FKGP+L+ + ++T LQ+ LGDDNVL V+FA+E
Sbjct: 607 EDRRLYFDWDSGSTHVYHCYVNVDGSYRFKGPYLY-KIRRTLLQKELGDDNVLMVKFAKE 665
Query: 705 VVNRNDFNRSN--AGYQNIANEGIYVGLRRYQFFVFKDGGKEEKKKSLTSSPVKCYFVRM 878
V R + Y +A EGI VGLRRY+FFVFKDGG EEKKK+ TSSPVKCYFVR+
Sbjct: 666 EVQRGQSGACHNYPTYMKVAREGILVGLRRYRFFVFKDGGNEEKKKNPTSSPVKCYFVRV 725
Query: 879 ESNASIDAEKPYIFSNKSIHEARSVFMHVHTVSSVAKYMARFSLILSKTLKLDVDHASVH 1058
S+A+ID Y S+ +++EAR +FMH HT++S+ YMARFSLILSKT+ L D + V
Sbjct: 726 ASDAAIDKGVYYRLSHMTMYEARCLFMHAHTLASIDNYMARFSLILSKTMSLKADWSLVK 785
Query: 1059 IDTIEDIDCLDGDGRIIRNEDGEALIHTDGTGFISEDLALKCPRNVYKGHYSSHGEFERN 1238
++ I++ CLD G I ++ + LIHTDGTGFISEDLAL CP+ KG + S +
Sbjct: 786 VEIIDEEYCLDESGNCIYRDE-KPLIHTDGTGFISEDLALLCPKIEAKGQWISDEHMKGL 844
Query: 1239 LDRIEFEDKSSELTKSTSHIREPPLLIQFRLFNNGRAVKGTFLVNKKLPPKTIQIRPSMI 1418
D E +D ++ EPPLLIQ RLF+NG A KGT LVNKKL P IQIRPSM+
Sbjct: 845 PDPDELDDTGKN--RAGLRTEEPPLLIQCRLFHNGSASKGTLLVNKKLQPNRIQIRPSML 902
Query: 1419 KVDTDPKHLDTQTANSLEIVSTSNRPRKTSYLSRFLIAHLNYGGVPREYFMELLMNALEA 1598
KV TDP + QT NSLEIV TS PR T +LSR LIA L +GGVP E+FM++L ALE
Sbjct: 903 KVKTDPVISNNQTLNSLEIVGTSTPPRNT-HLSRILIALLVHGGVPEEFFMQILNKALED 961
Query: 1599 AQSVHYNKSEALTVSLRYGEMDD-FLVPRMILCGIPLNEPYLQYRMSVLLKEERKGLKVG 1775
+ V K AL V+ +YGEMDD FL MI GIPL E YL+YR+SVL+KEE L+ G
Sbjct: 962 SHGVFCKKRAALKVAEKYGEMDDNFLGRLMISFGIPLEESYLRYRLSVLMKEENNSLRKG 1021
Query: 1776 KLPVSECYYLMGTADPTGMLNSDQVCIILDSGQISGKVLVYKHPGLHFGDIHVLTATYVK 1955
+L + + Y LMGTADPTG L D+VC GQ+SGKVLVY++PGLH GDIHVL ATYVK
Sbjct: 1022 RLYIPDSYNLMGTADPTGTLKEDEVC----DGQLSGKVLVYRYPGLHIGDIHVLKATYVK 1077
Query: 1956 DLELIVGNAKYAIFFPTKGPRSLADEMANSDFDGDMYWVSRNPQLLQYFQPSEPW-KRPH 2132
++E IVGNAKY IFF KGPRS+ADEM DFDGD+YWVSRNPQLL++++PSEPW +
Sbjct: 1078 EIEYIVGNAKYGIFFSCKGPRSIADEMGGGDFDGDLYWVSRNPQLLEWYKPSEPWIEASI 1137
Query: 2133 SAKCVCHQKPTDFSTDELENVLFQQFLTARFPLSNTLGMAADSWLSFMDRVLTLGDECAA 2312
S K + P+D S ++LE+VLF+ FLT RF S + AAD+WL++MD LTLGD
Sbjct: 1138 STKKNPSRCPSDHSPEDLEDVLFRSFLTTRFEPSFAMSEAADNWLAWMDHFLTLGDSNIH 1197
Query: 2313 EKCRVKEKMLQLVDIYYDALDASKTGKKVEVPNELKADKFPHFMKRANSYYSKSILGLIY 2492
EK VKEK+LQLVD+YY ALDA+K G KV+VP ELK FPH+M + SY S SILG IY
Sbjct: 1198 EKNNVKEKILQLVDLYYTALDAAKKGVKVDVPKELKVSCFPHYMGKNRSYPSTSILGSIY 1257
Query: 2493 DKVDSFQATELPSKEVWKLPCF-SGEAPVSCLKSWKDHYDHYRNEMTHAL-KLDSESRQV 2666
++VD Q + KEV KLP F E P +CL W + + YR EM AL D +S+
Sbjct: 1258 NRVDEHQTEDRSLKEVEKLPAFDENEVPDACLDKWAELHRQYRKEMASALDDDDKQSKNQ 1317
Query: 2667 AADEVIQKYKQKLYGAAEFEESARKQEEIFNEALAIYEISYDYAKKINDVGKCSFAWRVA 2846
+AD VI+KY++ LY A +FEES R EEI+NEA AIY + YD+AK++ +V CSFAWRVA
Sbjct: 1318 SADVVIRKYRKILYEANDFEESRRPIEEIYNEAHAIYHVCYDHAKRVGNVKVCSFAWRVA 1377
Query: 2847 GRALCMLHASNQDKDTIVCVKSVLREVL 2930
G+ALC LHA N ++ V SVL E+L
Sbjct: 1378 GKALCQLHARNNNERFCTIVSSVLMEIL 1405
>ref|XP_006296906.1| hypothetical protein CARUB_v10012898mg [Capsella rubella]
gi|482565615|gb|EOA29804.1| hypothetical protein
CARUB_v10012898mg [Capsella rubella]
Length = 982
Score = 879 bits (2271), Expect = 0.0
Identities = 463/866 (53%), Positives = 612/866 (70%), Gaps = 6/866 (0%)
Frame = +3
Query: 348 LLSLGELEFRKAFLILSYCGKKKLEESISVDLIQSMKNLPMTEFESQLWRLVGQKCIEET 527
L++LGELEF+KAFL+LSY ++L E ++ + I+ K+LPM +E+ +W +G+K +T
Sbjct: 145 LVALGELEFKKAFLLLSYIPGQRLGEVVTAEEIRRWKDLPMVAYEAAVWDSLGRKFCPQT 204
Query: 528 DRSKSLDWDSGRTYIYRCYVDPDGSYTFKGPHLHLQKQKTHLQRVLGDDNVLDVRFAEEV 707
D + L WDSG+T+ Y+C+V PDGSYTFKGP L + THL +VLGD+NVL V+FA
Sbjct: 205 DE-RVLQWDSGKTHYYQCHVAPDGSYTFKGPLL--ESTGTHLHKVLGDENVLTVKFANVQ 261
Query: 708 VNRNDF-NRSNAGYQNIANEGIYVGLRRYQFFVFKDGGKEEKKKSLTSSPVKCYFVRMES 884
N + + + S Y+ IA GI VGLRRY+FFVFKDGGK++K K +++ KCYF+R +S
Sbjct: 262 KNSSTYCSDSYFTYKGIAKNGIMVGLRRYKFFVFKDGGKDDKNKDVSTKRAKCYFIRTDS 321
Query: 885 NASIDAEKPYIFSNKSIHEARSVFMHVHTVSSVAKYMARFSLILSKTLKLDVDHASVHID 1064
ASID EKPYIFS KSIHEAR FMHVHT+ S+A YMARFSLILSKT KL+VD V+ +
Sbjct: 322 TASIDMEKPYIFSGKSIHEARMHFMHVHTLPSLANYMARFSLILSKTKKLEVDLTGVNFE 381
Query: 1065 TIEDIDCLDGDGRIIRNEDGEALIHTDGTGFISEDLALKCPRNVYKGHYSSHGEFERNLD 1244
I+DI C D DG+ + +++ + IH+DGTG+ISEDLA CP N+YKG
Sbjct: 382 IIKDIPCHDQDGKDVLDKNKKPRIHSDGTGYISEDLAQMCPVNIYKG------------- 428
Query: 1245 RIEFEDKSSELTKSTSHIREPPLLIQFRLFNNGRAVKGTFLVNKKLPPKTIQIRPSMIKV 1424
+ DK E +EPPLLIQFR+F NG A+KGTFL+NKK+P +T+Q+RPSMIKV
Sbjct: 429 KCLRSDKIKEACG-----QEPPLLIQFRMFYNGYAIKGTFLLNKKIPSRTVQVRPSMIKV 483
Query: 1425 DTDPKHLDTQTANSLEIVSTSNRPRKTSYLSRFLIAHLNYGGVPREYFMELLMNALEAAQ 1604
D + T N+LE+V+TS P++T LSR L+A L+YGG+P E+F+++L N LE ++
Sbjct: 484 LPDSLP-NISTFNTLEVVNTSFPPKRTK-LSRNLVALLSYGGIPDEFFLDILHNTLEESK 541
Query: 1605 SVHYNKSEALTVSLRYGEMDDFLVPRMILCGIPLNEPYLQYRMSVLLKEERKGLKVGKLP 1784
++ YNK AL +L YGEMDD +MIL GIPL+EP+L+ +S LK E+ LK G+LP
Sbjct: 542 AIFYNKRAALNAALSYGEMDDQNAAQMILAGIPLDEPHLKTCLSSFLKREKNDLKAGRLP 601
Query: 1785 VSECYYLMGTADPTGMLNSDQVCIILDSGQISGKVLVYKHPGLHFGDIHVLTATYVKDLE 1964
V+E YYLMGT DPTG L D+VC+IL+SGQISG+VLVY++PGLHFGDIHVL ATYVK LE
Sbjct: 602 VTESYYLMGTVDPTGELKEDEVCVILESGQISGEVLVYRNPGLHFGDIHVLKATYVKALE 661
Query: 1965 LIVGNAKYAIFFPTKGPRSLADEMANSDFDGDMYWVSRNPQLLQYFQPSEPW-KRPHSAK 2141
VGN+K+A+FFP KGPRSL DE+A DFDGD+Y++SRNP+LL++F+PSEPW +K
Sbjct: 662 EYVGNSKFAVFFPQKGPRSLGDEIAGGDFDGDIYFISRNPELLEHFKPSEPWVSLTPPSK 721
Query: 2142 CVCHQKPTDFSTDELENVLFQQFLTARFPLSNTLGMAADSWLSFMDRVLTLGDECAAEKC 2321
+ P FS +ELE LF+ FL A F SN +GMAADSWL+ MDR L LGDE A EK
Sbjct: 722 SNSARGPCQFSPEELEEELFEMFLKAGFHASNVIGMAADSWLTIMDRFLILGDESADEKA 781
Query: 2322 RVKEKMLQLVDIYYDALDASKTGKKVEVPNELKADKFPHFMKRANSYYSKSILGLIYDKV 2501
+K+KML+L+DIYYDALDA K G KV +PNEL+ D FPH+M+R + S SILGLIYD V
Sbjct: 782 EMKQKMLELIDIYYDALDAPKKGAKVYLPNELRPDIFPHYMERDKKFKSTSILGLIYDFV 841
Query: 2502 DSFQATELPS--KEVWKLPCFSGEAPVS--CLKSWKDHYDHYRNEMTHALKLDSESRQVA 2669
S Q T+ PS E+ KLPCF E PVS +K + YD Y++EMTHA+ D+ ++
Sbjct: 842 QS-QTTKQPSPPSEINKLPCFEDE-PVSEFHMKECRRWYDEYKDEMTHAMNTDASNK--- 896
Query: 2670 ADEVIQKYKQKLYGAAEFEESARKQEEIFNEALAIYEISYDYAKKINDVGKCSFAWRVAG 2849
+E+I++ K+ YGAA FEES + EE++ +ALA+Y I YD+A V +C F W+VAG
Sbjct: 897 -NEIIERCKEDFYGAASFEESKKSLEELYPQALALYNIVYDHATHAG-VSRCGFVWKVAG 954
Query: 2850 RALCMLHASNQDKDTIVCVKSVLREV 2927
LC + + + T+V SVL+E+
Sbjct: 955 PVLCRFYLKKRHEKTLVSSPSVLKEI 980
>ref|NP_179583.3| probable RNA-dependent RNA polymerase 5 [Arabidopsis thaliana]
gi|322967572|sp|O82188.2|RDR5_ARATH RecName:
Full=Probable RNA-dependent RNA polymerase 5;
Short=AtRDRP5; AltName: Full=RNA-directed RNA polymerase
5 gi|330251850|gb|AEC06944.1| probable RNA-dependent RNA
polymerase 5 [Arabidopsis thaliana]
Length = 977
Score = 871 bits (2251), Expect = 0.0
Identities = 461/873 (52%), Positives = 614/873 (70%), Gaps = 13/873 (1%)
Frame = +3
Query: 348 LLSLGELEFRKAFLILSYCGKKKLEESISVDLIQSMKNLPMTEFESQLWRLVGQKCIEET 527
L++LGELEF+K FL+LSY + + + I+ D I+ K+LPM E+E+ +W +G+ +
Sbjct: 131 LVALGELEFKKVFLLLSYIPGQHVGQVITADEIRLWKDLPMVEYEAAVWDRLGRHYCPQK 190
Query: 528 DRSKSLDWDSGRTYIYRCYVDPDGSYTFK------GPHLHLQKQKTHLQRVLGDDNVLDV 689
DR + L WDSG+T+ Y+C V P+GSYTFK GP L + THL +VLGDDNVL V
Sbjct: 191 DR-RMLQWDSGKTHYYQCNVAPNGSYTFKVLSALQGPLL--EHTGTHLHKVLGDDNVLTV 247
Query: 690 RFAEEVVNRNDFNRSNA-GYQNIANEGIYVGLRRYQFFVFKDGGKEEKKKSLTSSPVKCY 866
+FA+ + + ++ + Y+ IA GI +GLRRYQFFVFKDGGKEEKKK L++ VKCY
Sbjct: 248 KFADVQKSSSTYSIDHYFTYKGIAKNGIMIGLRRYQFFVFKDGGKEEKKKDLSTKKVKCY 307
Query: 867 FVRMESNASIDAEKPYIFSNKSIHEARSVFMHVHTVSSVAKYMARFSLILSKTLKLDVDH 1046
F+R +S A D + PYI + KSI+EAR FMHVH ++A YMARFSLILSKT L+VD
Sbjct: 308 FIRTDSTAFYDMQNPYILTGKSIYEARMHFMHVHRAPTLANYMARFSLILSKTKTLEVDM 367
Query: 1047 ASVHIDTIEDIDCLDGDGRIIRNEDGEALIHTDGTGFISEDLALKCPRNVYKGHYSSHGE 1226
+ D I+DI C D DG+ + +++ + IH+DGTG+ISEDLA CP N++KG
Sbjct: 368 TGITFDQIDDIHCHDQDGKDVLDKNKKPCIHSDGTGYISEDLARMCPLNIFKG------- 420
Query: 1227 FERNLDRIEFEDKSSELTKSTSHIREPPLLIQFRLFNNGRAVKGTFLVNKKLPPKTIQIR 1406
+ SE + + ++PPLLIQFR+F +G AVKGTFL+NKKL P+T+Q+R
Sbjct: 421 ----------KCLRSESIQEACY-QDPPLLIQFRMFYDGYAVKGTFLLNKKLCPRTVQVR 469
Query: 1407 PSMIKVDTDPKHLDTQTANSLEIVSTSNRPRKTSYLSRFLIAHLNYGGVPREYFMELLMN 1586
PSMIKV DP + T N+LE+V+TSN P++T LS+ L+A L+YGG+P E+F+++L+N
Sbjct: 470 PSMIKVSKDPSLSNFSTFNALEVVTTSNPPKRTK-LSKNLVALLSYGGIPNEFFLDILLN 528
Query: 1587 ALEAAQSVHYNKSEALTVSLRYGEMDDFLVPRMILCGIPLNEPYLQYRMSVLLKEERKGL 1766
LE ++S+ YNK AL +L YGEMDD +MIL GIPL+EP+L+ +S+LLK E+ L
Sbjct: 529 TLEESKSIFYNKRAALNAALNYGEMDDQNAAQMILVGIPLDEPHLKNYLSILLKTEKNDL 588
Query: 1767 KVGKLPVSECYYLMGTADPTGMLNSDQVCIILDSGQISGKVLVYKHPGLHFGDIHVLTAT 1946
K GKLPV+E YYLMGT DPTG L D+VC+IL+SGQISG+VLVY++PGLHFGDIH+L AT
Sbjct: 589 KAGKLPVTESYYLMGTVDPTGALKEDEVCVILESGQISGEVLVYRNPGLHFGDIHILKAT 648
Query: 1947 YVKDLELIVGNAKYAIFFPTKGPRSLADEMANSDFDGDMYWVSRNPQLLQYFQPSEPW-K 2123
YVK LE VGN+K+A+FFP KGPRSL DE+A DFDGDMY++SRNP+LL+ F+PSEPW
Sbjct: 649 YVKALEEYVGNSKFAVFFPQKGPRSLGDEIAGGDFDGDMYFISRNPELLENFKPSEPWVS 708
Query: 2124 RPHSAKCVCHQKPTDFSTDELENVLFQQFLTARFPLSNTLGMAADSWLSFMDRVLTLGDE 2303
+K + P+ S +ELE LF+ FLTA F SN +G+AADSWL+ MDR L LGD+
Sbjct: 709 LTPPSKSNSGRAPSQLSPEELEEELFEMFLTAGFHASNVIGIAADSWLTIMDRFLILGDD 768
Query: 2304 CAAEKCRVKEKMLQLVDIYYDALDASKTGKKVEVPNELKADKFPHFMKRANSYYSKSILG 2483
A EK +K+KML+L+DIYYDALDA K G KV +PN+LK D FPH+M+R + S SILG
Sbjct: 769 RAEEKAEMKKKMLELIDIYYDALDAPKKGDKVYLPNKLKPDIFPHYMERDKKFQSTSILG 828
Query: 2484 LIYDKVDSFQATE--LPSKEVWKLPCFSGEAPVS--CLKSWKDHYDHYRNEMTHALKLDS 2651
LI+D V S Q TE PS E+ KLPCF E PVS ++ + YD+YR EMT A+K D
Sbjct: 829 LIFDFVKS-QTTEEPSPSSEISKLPCFEDE-PVSEFHMQKCRLWYDNYRTEMTQAMKTDK 886
Query: 2652 ESRQVAADEVIQKYKQKLYGAAEFEESARKQEEIFNEALAIYEISYDYAKKINDVGKCSF 2831
+ +A+EVIQ+YKQ+ YGAA FE+S + EE++ +ALA+Y+I YDYA V KC F
Sbjct: 887 DE---SANEVIQRYKQEFYGAAGFEDSKKSLEELYPQALALYKIVYDYAIHAG-VSKCRF 942
Query: 2832 AWRVAGRALCMLHASNQ-DKDTIVCVKSVLREV 2927
W+VAG LC + + + + +VC SVL+E+
Sbjct: 943 VWKVAGPVLCRFYLNKKMQEKCLVCAPSVLKEL 975
>ref|XP_006572940.1| PREDICTED: probable RNA-dependent RNA polymerase 5-like [Glycine max]
Length = 988
Score = 869 bits (2245), Expect = 0.0
Identities = 475/990 (47%), Positives = 644/990 (65%), Gaps = 15/990 (1%)
Frame = +3
Query: 3 ICEEQSLLSPDIRARRELSLLGEEASLQLLQR---TRNLSDYIIYMAGVSDPVSSQEXXX 173
IC +Q+ D R L L GEE SL++L + TR + ++ + D ++ Q
Sbjct: 24 ICRDQNRPPLDYSTRHRLKLQGEEQSLRILNKIAATRIRLSFAGFVNHMLDDINHQNNNN 83
Query: 174 XXXXXXXXXXXXXXXXXXX--TKLPFSNLEEPKPKGQMNLNXXXXXXXXXXXXXXXXXXH 347
T+ S P+P L+
Sbjct: 84 NNNNNNNNNNNNNSHSQPEPSTRQQTSPTRPPRPTPSSLLH------------------- 124
Query: 348 LLSLGELEFRKAFLILSYCGKKKLEESISVDLIQSMKNLPMTEFESQLWRLVGQKCI-EE 524
+LGELEFRKAFLILSY G++ LE I+ I+S+K+LPM +FE +W G+KCI ++
Sbjct: 125 --ALGELEFRKAFLILSYIGRESLENCITDAKIRSLKDLPMAKFEKTIWEDFGEKCIYDQ 182
Query: 525 TDRSKSLDWDSGRTYIYRCYVDPDGSYTFKGPHLHLQKQKTHLQRVLGDDNVLDVRFAEE 704
+DR DW+SGRT++Y+C+V PDG+ FKGP L Q +THLQ+ LGDDNVL V+FAE+
Sbjct: 183 SDRQLHRDWNSGRTHVYQCFVFPDGNLRFKGPIL--QSTRTHLQKTLGDDNVLLVKFAED 240
Query: 705 VVNRN---DFNRSNAGYQNIANEGIYVGLRRYQFFVFKDGGKEEKKKSLTSSPVKCYFVR 875
+N +NA Y EGI VGLR Y+FFVFKDGG EEK+K TSS VKCYFVR
Sbjct: 241 GSGKNFRTHAEEANALYGKFGKEGIRVGLRLYRFFVFKDGGNEEKQKDPTSSTVKCYFVR 300
Query: 876 MESNASIDAEKPYIFSNKSIHEARSVFMHVHTV-SSVAKYMARFSLILSKTLKLDVDHAS 1052
M+S S D YI SNK++ EAR++FMH H + ++ KYMARFSLILSKTLKL++D +
Sbjct: 301 MQSGCSADEGADYILSNKTVSEARTLFMHAHMLLPNLNKYMARFSLILSKTLKLNIDLTT 360
Query: 1053 VHIDTIEDIDCLDGDGRIIRNEDGEALIHTDGTGFISEDLALKCPRNVYKGHYSSHGEFE 1232
V + I D C D +G I+ + + ++ TDGTGFIS DLAL CP NVYKG + +
Sbjct: 361 VSVQKIPDEYCKDANGNIMVDNEKPRIL-TDGTGFISRDLALLCPNNVYKGSNLENNCIQ 419
Query: 1233 RNLDRIEFEDKSSELTKSTS-HIREPPLLIQFRLFNNGRAVKGTFLVNKKLPPKTIQIRP 1409
+ +E ED S+ + ++ EPPLLIQ RLF+ G A+KGT LVN+KLPP+TIQ+RP
Sbjct: 420 EINNLVELEDMSNAMGEAEQLSTHEPPLLIQCRLFHMGHAIKGTLLVNRKLPPRTIQVRP 479
Query: 1410 SMIKVDTDPKHLDTQTANSLEIVSTSNRPRKTSYLSRFLIAHLNYGGVPREYFMELLMNA 1589
SMIKV+ DP + Q+ NSLE+V+TSN+P++ YLS+ LIA L++GGVP E+FM+LL +
Sbjct: 480 SMIKVEKDPS-VHMQSINSLEVVTTSNKPKR-GYLSKHLIALLSFGGVPNEFFMDLLRSN 537
Query: 1590 LEAAQSVHYNKSEALTVSLRYGEMDDFLVPRMILCGIPLNEPYLQYRMSVLLKEERKGLK 1769
+E A V+ NK AL S+ GE D++ MILCGIPL+EP+L++ +S +EE+K L+
Sbjct: 538 MEDANHVYSNKRSALRASINCGEKDEYNAAEMILCGIPLDEPFLKHHLSRFAREEKKKLR 597
Query: 1770 VGKLPVSECYYLMGTADPTGMLNSDQVCIILDSGQISGKVLVYKHPGLHFGDIHVLTATY 1949
GKL + +C+YLMGT DPTG L +QVCII ++ QI G VLVY++PGLHFGDIH + ATY
Sbjct: 598 GGKLYMPDCFYLMGTVDPTGHLKKNQVCIIHENSQIVGDVLVYRNPGLHFGDIHKMDATY 657
Query: 1950 VKDLELIVGNAKYAIFFPTKGPRSLADEMANSDFDGDMYWVSRNPQLLQYFQPSEPWKRP 2129
VK+LE VG++KY IFFP G RS+ADE+A DFDGD YWVS +PQLLQYF+ +PW
Sbjct: 658 VKELESYVGHSKYGIFFPRVGTRSVADEIAGGDFDGDTYWVSNHPQLLQYFRKGDPWIEN 717
Query: 2130 HSAKCVCHQKPTDFSTDELENVLFQQFLTARFPLSNTLGMAADSWLSFMDRVLTLGDECA 2309
+KP++FS +ELE LF+ FL RF S +GM+ +SW++ MDR+LTL + C
Sbjct: 718 SVPLDSSVKKPSEFSPEELEEELFRLFLKTRFQPSYAMGMSENSWMALMDRLLTL-NNCT 776
Query: 2310 --AEKCRVKEKMLQLVDIYYDALDASKTGKKVEVPNELKADKFPHFMKRANSYYSKSILG 2483
EK RVKE ML+L+DIYY+ALDA K+G+KV+VPN+L A+ FPH+M++ S+ S SILG
Sbjct: 777 NENEKERVKENMLKLIDIYYEALDAPKSGRKVQVPNDLIAELFPHYMEKDKSFTSTSILG 836
Query: 2484 LIYDKVDSFQATELPSKEVWKLPCFSGEAPVSCLKSWKDHYDHYRNEMTHALKLDSESR- 2660
LIYD+V+ + ++ E+WKLPCF E P SCL+ WK Y+ YR +MT AL L +S+
Sbjct: 837 LIYDEVEIWLENDMVG-EIWKLPCFDVEVPPSCLEKWKTKYEEYRKDMTDALNLKDKSKS 895
Query: 2661 QVAADEVIQKYKQKLYG-AAEFEESARKQEEIFNEALAIYEISYDYAKKINDVGKCSFAW 2837
A EV +KYK++ YG E E + +IFNEALA+Y +SY+YA +V +C FAW
Sbjct: 896 HEEAAEVNRKYKEEFYGPTLEMEGCLKSIGDIFNEALAVYNVSYEYAMLKKEVKRCGFAW 955
Query: 2838 RVAGRALCMLHASNQDKDTIVCVKSVLREV 2927
++AG AL L+ Q++ + C SV+RE+
Sbjct: 956 KIAGSALTRLYIIKQNEKALNCDPSVVREI 985
>ref|XP_006408908.1| hypothetical protein EUTSA_v10001897mg [Eutrema salsugineum]
gi|557110064|gb|ESQ50361.1| hypothetical protein
EUTSA_v10001897mg [Eutrema salsugineum]
Length = 988
Score = 867 bits (2240), Expect = 0.0
Identities = 455/865 (52%), Positives = 598/865 (69%), Gaps = 5/865 (0%)
Frame = +3
Query: 348 LLSLGELEFRKAFLILSYCGKKKLEESISVDLIQSMKNLPMTEFESQLWRLVGQKCIEET 527
+L+L ELEF+KAFL+LSY + L E +S D I+ K+LPM +E+ +W + + + +T
Sbjct: 148 ILALSELEFKKAFLLLSYFPGQSLAEVLSADEIRQWKDLPMVAYEAAVWDRLSRLELSQT 207
Query: 528 DRSKSLDWDSGRTYIYRCYVDPDGSYTFKGPHLHLQKQKTHLQRVLGDDNVLDVRFAEEV 707
SL+WDS +T+ Y+C+V DGSYTFKGP L + THL +VLGD+NVL V+FA+
Sbjct: 208 VERVSLEWDSEKTHYYQCHVASDGSYTFKGPLL--EPTGTHLHKVLGDENVLTVKFADVQ 265
Query: 708 VNRNDFNRSN-AGYQNIANEGIYVGLRRYQFFVFKDGGKEEKKKSLTSSPVKCYFVRMES 884
N + ++ + Y+ IA GI VGLRRYQFFVFKD GK EKKK +++ VKCYF+R +S
Sbjct: 266 KNSSTYSNDRYSAYKRIAKNGIMVGLRRYQFFVFKDVGKAEKKKDFSTNGVKCYFIRTDS 325
Query: 885 NASIDAEKPYIFSNKSIHEARSVFMHVHTVSSVAKYMARFSLILSKTLKLDVDHASVHID 1064
A+ D K YIFS K+I+EAR FMHVHT+ S+AKYMARFSLILSKT KL+VD +
Sbjct: 326 TAANDMGKAYIFSGKTINEARMHFMHVHTLPSLAKYMARFSLILSKTKKLEVDMTGITYQ 385
Query: 1065 TIEDIDCLDGDGRIIRNEDGEALIHTDGTGFISEDLALKCPRNVYKGHYSSHGEFERNLD 1244
I++I C D + ++ +++ E +H+DGTG+ISEDLA CP N++KG S + +
Sbjct: 386 EIKEIHCHDQNNNVVLDKNKEPRMHSDGTGYISEDLARMCPVNIFKGKCLSKKNIQESCG 445
Query: 1245 RIEFEDKSSELTKSTSHIREPPLLIQFRLFNNGRAVKGTFLVNKKLPPKTIQIRPSMIKV 1424
+ +PPLLIQFR+F +G AVKGTFL+NKKLP +T+Q+RPSMIKV
Sbjct: 446 Q------------------DPPLLIQFRMFYDGNAVKGTFLLNKKLPDRTVQVRPSMIKV 487
Query: 1425 DTDPKHLDTQTANSLEIVSTSNRPRKTSYLSRFLIAHLNYGGVPREYFMELLMNALEAAQ 1604
D + T NSLE+V+TSN P++T LSR L+A L+YGGVP E+F++LL+N +E +
Sbjct: 488 SKDRALSNFSTFNSLEVVTTSNPPKRTK-LSRNLVALLSYGGVPNEFFLDLLLNTMEETK 546
Query: 1605 SVHYNKSEALTVSLRYGEMDDFLVPRMILCGIPLNEPYLQYRMSVLLKEERKGLKVGKLP 1784
++ NK AL +L +G+MDD +MIL GIPL+EP+L+ R+S+L E+ LK G+LP
Sbjct: 547 TIFNNKRAALKAALNHGDMDDQNAAQMILVGIPLDEPHLKDRLSILSNIEKNDLKAGRLP 606
Query: 1785 VSECYYLMGTADPTGMLNSDQVCIILDSGQISGKVLVYKHPGLHFGDIHVLTATYVKDLE 1964
V+E YYLMGT DPTG L D+VC+IL+SGQISG VLVY++PG+HFGDIHVL ATYVK LE
Sbjct: 607 VTESYYLMGTVDPTGELKEDEVCVILESGQISGDVLVYRNPGVHFGDIHVLKATYVKALE 666
Query: 1965 LIVGNAKYAIFFPTKGPRSLADEMANSDFDGDMYWVSRNPQLLQYFQPSEPW-KRPHSAK 2141
VGN+KYA+FFP KGPRSL DE+A DFDGDMY++SRNP+LL+ F+PSEPW +K
Sbjct: 667 EYVGNSKYAVFFPQKGPRSLGDEIAGGDFDGDMYFISRNPELLEQFKPSEPWVSLSPPSK 726
Query: 2142 CVCHQKPTDFSTDELENVLFQQFLTARFPLSNTLGMAADSWLSFMDRVLTLGDECAAEKC 2321
+KP DFS +ELE LF FL ARF SN +GMAADSWL+ MDR LTLGDE A EK
Sbjct: 727 SNSTRKPIDFSPEELEEELFDMFLKARFHSSNVIGMAADSWLTIMDRFLTLGDERAEEKA 786
Query: 2322 RVKEKMLQLVDIYYDALDASKTGKKVEVPNELKADKFPHFMKRANSYYSKSILGLIYDKV 2501
+K KML L+DIYYDALDA+K G KV +P+ LK D FPH+M+R + S SILG+IYD V
Sbjct: 787 EMKRKMLSLIDIYYDALDAAKKGVKVSLPDALKPDIFPHYMERDKKFKSTSILGIIYDFV 846
Query: 2502 DSFQATE-LPSKEVWKLPCFSGEAPVSCL--KSWKDHYDHYRNEMTHALKLDSESRQVAA 2672
S A E PS E+ KL CF E PVS + + YD+YR EM AL ++ A
Sbjct: 847 QSQTAEEHTPSSEISKLQCFEDE-PVSEFHKEKCRPWYDNYRAEMIQAL----SNKDDTA 901
Query: 2673 DEVIQKYKQKLYGAAEFEESARKQEEIFNEALAIYEISYDYAKKINDVGKCSFAWRVAGR 2852
EVI+KYKQ+ YGAA FE+S + EE++ +ALA+Y I YDYA ++ V KC FAW+VAG
Sbjct: 902 SEVIEKYKQEFYGAAGFEDSKKSLEELYPQALALYNIVYDYAIEMKSVRKCGFAWKVAGP 961
Query: 2853 ALCMLHASNQDKDTIVCVKSVLREV 2927
LC + ++C S+L+E+
Sbjct: 962 VLCRFYLKKTGGKALLCSLSMLKEL 986
>ref|XP_007204275.1| hypothetical protein PRUPE_ppa001584mg [Prunus persica]
gi|462399806|gb|EMJ05474.1| hypothetical protein
PRUPE_ppa001584mg [Prunus persica]
Length = 798
Score = 862 bits (2228), Expect = 0.0
Identities = 462/830 (55%), Positives = 576/830 (69%), Gaps = 9/830 (1%)
Frame = +3
Query: 468 MTEFESQLWRLVGQKCIEETDRSKSLDWDSGRTYIYRCYVDPDGSYTFKGPHLHLQKQKT 647
M FE+ +W +G+ I R + DWDSG+TY+Y C V DGSY FKGP L+ K +T
Sbjct: 1 MQLFETTVWEALGRNYIGT--RHPTFDWDSGKTYVYHCEVSVDGSYKFKGPCLNNTK-RT 57
Query: 648 HLQRVLGDDNVLDVRFAEEVVNR-----NDFNRSNAGYQNIANEGIYVGLRRYQFFVFKD 812
LQ+VLGDDNVL V+F++ V R D N +N Y +A EGI VGLRRYQFFVFKD
Sbjct: 58 LLQKVLGDDNVLMVKFSDVVTERVPTAIKDNNYAN--YSKVAREGILVGLRRYQFFVFKD 115
Query: 813 GGKEEKKKSLTSSPVKCYFVRMESNASIDAEKPYIFSNKSIHEARSVFMHVHTVSSVAKY 992
GG +EKKK+ TSSPVKCYF+ + SNA+ID + Y FSN+ IHE R +FMH HTVSSV+ Y
Sbjct: 116 GGNKEKKKNPTSSPVKCYFICVGSNAAIDRSEDYKFSNRKIHETRCIFMHAHTVSSVSNY 175
Query: 993 MARFSLILSKTLKLDVDHASVHIDTIEDIDCLDGDGRIIRNEDGEALIHTDGTGFISEDL 1172
MARFSLILSKT L+VD + V ++ I+D CLD G I + DG+ LIHTDGTGFISEDL
Sbjct: 176 MARFSLILSKTESLEVDWSLVKVEDIDDEYCLDESGNRI-DRDGKPLIHTDGTGFISEDL 234
Query: 1173 ALKCPRNVYKGHYSSHGEFERNLDRIEFEDKSSELTKSTSHIREPPLLIQFRLFNNGRAV 1352
AL CP+++ K Y S E PLL+QFRLF GRAV
Sbjct: 235 ALLCPKDLLKRDYISKEYIE-------------------------PLLLQFRLFYKGRAV 269
Query: 1353 KGTFLVNKKLPPKTIQIRPSMIKVDTDPKHLDTQTANSLEIVSTSNRPRKTSYLSRFLIA 1532
KGTFL+NK LPPKTIQIRPSM+KV+TDP D QT NSLEIV+ S R T + SR LIA
Sbjct: 270 KGTFLINKTLPPKTIQIRPSMVKVETDPMISDDQTVNSLEIVTVSKSHRNT-FFSRHLIA 328
Query: 1533 HLNYGGVPREYFMELLMNALEAAQSVHYNKSEALTVSLRYGEMDD-FLVPRMILCGIPLN 1709
L +GGVP+EYF ELLM LE + V ++ A V+ +GE+DD + +MIL GIPL
Sbjct: 329 LLCHGGVPKEYFRELLMKDLEDTRGVFCSRRAAFKVAYNHGEIDDDYNSVKMILSGIPLE 388
Query: 1710 EPYLQYRMSVLLKEERKGLKVGKLPVSECYYLMGTADPTGMLNSDQVCIILDSGQISGKV 1889
E YLQYR+S+L KEE K L+ GK+ + Y LMGTADPTG+L D+VCIILDSGQ+SG+V
Sbjct: 389 ESYLQYRLSILKKEENKSLQKGKICSPQSYMLMGTADPTGILERDEVCIILDSGQMSGQV 448
Query: 1890 LVYKHPGLHFGDIHVLTATYVKDLELIVGNAKYAIFFPTKGPRSLADEMANSDFDGDMYW 2069
LVY+HPGLHFGDIH+L A YVK+LE +VGNAKYAIFF KGPRS+ADEM DFDGD+YW
Sbjct: 449 LVYRHPGLHFGDIHLLKARYVKELEYVVGNAKYAIFFSCKGPRSVADEMGGGDFDGDLYW 508
Query: 2070 VSRNPQLLQYFQPSEPW-KRPHSAKCVCHQKPTDFSTDELENVLFQQFLTARFPLSNTLG 2246
VSRNPQLL+ F+PSEPW + S V +P++ + +E+ L + FL RF S +
Sbjct: 509 VSRNPQLLECFKPSEPWIEASSSTPKVASTRPSELLPNHIEDALIKLFLKTRFEPSFAMS 568
Query: 2247 MAADSWLSFMDRVLTLGDECAAEKCRVKEKMLQLVDIYYDALDASKTGKKVEVPNELKAD 2426
A+DSWL+ MDR+L LGD +EK VK ML+LVD+YY+ALDA K G KV VP ELK++
Sbjct: 569 EASDSWLAMMDRLLILGDSSNSEKTHVKANMLRLVDLYYEALDAPKKGGKVVVPGELKSN 628
Query: 2427 KFPHFMKRANSYYSKSILGLIYDKVDSFQATELPSKEVWKLPCFSGEAPVSCLKSWKDHY 2606
FPH+M+R NSY S SILGLIYD V+++QA + KEV KLP F E P CLK W++HY
Sbjct: 629 LFPHYMERVNSYKSTSILGLIYDTVNAYQAEDASIKEVKKLPMFDVEVPEECLKKWREHY 688
Query: 2607 DHYRNEMTHALKLDS-ESRQVAADEVIQKYKQKLYGAAE-FEESARKQEEIFNEALAIYE 2780
HYR+EM+ A++ D +S+ AAD+V++KYK+ LYG AE E S R EIF+EALAIY
Sbjct: 689 QHYRSEMSSAMQDDDRDSKNNAADKVLRKYKEILYGGAEDLENSTRPLHEIFDEALAIYR 748
Query: 2781 ISYDYAKKINDVGKCSFAWRVAGRALCMLHASNQDKDTIVCVKSVLREVL 2930
++YD+A VGKC FAW+VAG ALC + + Q TI SVL++++
Sbjct: 749 VTYDHAISQGAVGKCCFAWKVAGSALCKYYMNKQGARTIEASFSVLKDLV 798
>ref|NP_179581.2| probable RNA-dependent RNA polymerase 3 [Arabidopsis thaliana]
gi|322967566|sp|O82190.2|RDR3_ARATH RecName:
Full=Probable RNA-dependent RNA polymerase 3;
Short=AtRDRP3; AltName: Full=RNA-directed RNA polymerase
3 gi|330251848|gb|AEC06942.1| probable RNA-dependent RNA
polymerase 3 [Arabidopsis thaliana]
Length = 992
Score = 856 bits (2211), Expect = 0.0
Identities = 451/867 (52%), Positives = 596/867 (68%), Gaps = 6/867 (0%)
Frame = +3
Query: 348 LLSLGELEFRKAFLILSYCGKKKL-EESISVDLIQSMKNLPMTEFESQLWRLVGQKCIEE 524
LL+LGELEF+KAFL+LSY G + L EE IS D I+ K+LPM +E+ +W +GQ+
Sbjct: 140 LLALGELEFKKAFLLLSYIGGESLVEEVISGDQIRKWKDLPMVSYEAAVWNRLGQRYCSP 199
Query: 525 TDRSKSLDWDSGRTYIYRCYVDPDGSYTFKGPHLHLQKQKTHLQRVLGDDNVLDVRFAEE 704
+R + L+ DSG T+ Y+C+V DGSY FKG HL L+ THL +VLGDDNVL V+F +
Sbjct: 200 KERRRPLEGDSGMTHYYQCHVATDGSYKFKG-HL-LENTGTHLHKVLGDDNVLTVKFDKV 257
Query: 705 VVNRNDFNRSNAGYQNIANEGIYVGLRRYQFFVFKDGGKEEKKKSLTSSPVKCYFVRMES 884
+ N + Y+ IA GI VGLRRY+FFVFKDGGKEEKKK +++ VKCYF+R +S
Sbjct: 258 LGVETYCNDLYSTYKGIAKNGIMVGLRRYRFFVFKDGGKEEKKKDVSTKGVKCYFIRTDS 317
Query: 885 NASIDAEKPYIFSNKSIHEARSVFMHVHTVSSVAKYMARFSLILSKTLKLDVDHASVHID 1064
ASID + PYIF+ KS+HEAR FMHV+T+SS+ YM+RFSLILSKT L+VD + +
Sbjct: 318 TASIDMQNPYIFAGKSMHEARMHFMHVNTLSSLPNYMSRFSLILSKTKTLEVDMTGITFE 377
Query: 1065 TIEDIDCLDGDGRIIRNEDGEALIHTDGTGFISEDLALKCPRNVYKGHYSSHGEFERNLD 1244
I+DI C D D + + +++G+ IH+DGTG+ISEDLA CP N++KG +++
Sbjct: 378 QIDDIHCHDQDDKDVLDKNGKPCIHSDGTGYISEDLARMCPVNIFKG---------KSMR 428
Query: 1245 RIEFEDKSSELTKSTSHIREPPLLIQFRLFNNGRAVKGTFLVNKKLPPKTIQIRPSMIKV 1424
+ K+ +EPPLLIQFR+F NG AVKGTFL NKKLPP+T+Q+RPSMIKV
Sbjct: 429 SNNIQSKNLNFEGQGPCGQEPPLLIQFRIFYNGYAVKGTFLTNKKLPPRTVQVRPSMIKV 488
Query: 1425 DTDPKHLDTQTANSLEIVSTSNRPRKTSYLSRFLIAHLNYGGVPREYFMELLMNALEAAQ 1604
D + T NSLE+V+TSN PRK LSR L+A L+YGGVP ++F+ +L N LE ++
Sbjct: 489 YEDRTLSNLSTFNSLEVVTTSNPPRKAR-LSRNLVALLSYGGVPNDFFLNILRNTLEESK 547
Query: 1605 SVHYNKSEALTVSLRYGEMDDFLVPRMILCGIPLNEPYLQYRMSVLLKEERKGLKVGKLP 1784
++ Y++ A ++ YG DD MIL GIPL+EPYL+ R+S LLK ER LK G+ P
Sbjct: 548 TIFYSERAAFKAAINYG--DDQYTADMILVGIPLDEPYLKDRLSYLLKTERNALKAGRFP 605
Query: 1785 VSECYYLMGTADPTGMLNSDQVCIILDSGQISGKVLVYKHPGLHFGDIHVLTATYVKDLE 1964
+ E YY+MGT DPTG L +++C+IL SGQISG VLVY++PGLHFGDIHVL ATYVK LE
Sbjct: 606 IDESYYIMGTVDPTGELKENEICVILHSGQISGDVLVYRNPGLHFGDIHVLKATYVKALE 665
Query: 1965 LIVGNAKYAIFFPTKGPRSLADEMANSDFDGDMYWVSRNPQLLQYFQPSEPW-KRPHSAK 2141
VGNAK+A+FFP KGPRSL DE+A DFDGDMY++SRNP+LL++F+PSEPW +K
Sbjct: 666 DYVGNAKFAVFFPQKGPRSLGDEIAGGDFDGDMYFISRNPKLLEHFKPSEPWVSSSKPSK 725
Query: 2142 CVCHQKPTDFSTDELENVLFQQFLTARFPLSNTLGMAADSWLSFMDRVLTLGDECAAEKC 2321
C +KP++ S +ELE LF+ FL ARF + +GMAAD WL MD LTLGDE A EK
Sbjct: 726 IYCGRKPSELSEEELEEELFKMFLKARFCKRDVIGMAADCWLGIMDPFLTLGDESAKEKY 785
Query: 2322 RVKEKMLQLVDIYYDALDASKTGKKVEVPNELKADKFPHFMKR--ANSYYSKSILGLIYD 2495
K+ +L+L+DIYYDALDA K G KV++P +L+ FPH+M+R + S SILGLI+D
Sbjct: 786 ERKKNILKLIDIYYDALDAPKKGAKVDLPPDLEIKNFPHYMERDPKRDFRSTSILGLIFD 845
Query: 2496 KVDSFQATELPSKEVWKLPCFSGE-APVSCLKSWKDHYDHYRNEMTHA-LKLDSESRQVA 2669
VDS A E P E+ KL F E P S + + Y++YR+EM+ A ++ D R
Sbjct: 846 TVDSHNAEEPPPSEISKLWYFEDEPVPKSHMDKFTSWYENYRSEMSQAMMETDKVKRNQL 905
Query: 2670 ADEVIQKYKQKLYGAAEFEESARKQEEIFNEALAIYEISYDYAKKINDVGKCSFAWRVAG 2849
+EVIQ+YKQ YGAA FE+S + EE++ +ALA+Y + YDYA + V KC+FAW VAG
Sbjct: 906 TNEVIQRYKQDFYGAAGFEDSNKSLEELYPQALALYNVVYDYAIQ-EGVAKCTFAWNVAG 964
Query: 2850 RALCMLHASNQDKDTIVCVKSVLREVL 2930
LC + ++V SVL+++L
Sbjct: 965 PVLCKFYLKKTKDKSVVASTSVLKKLL 991
>ref|XP_006353487.1| PREDICTED: probable RNA-dependent RNA polymerase 3-like [Solanum
tuberosum]
Length = 1110
Score = 845 bits (2183), Expect = 0.0
Identities = 460/875 (52%), Positives = 589/875 (67%), Gaps = 13/875 (1%)
Frame = +3
Query: 348 LLSLGELEFRKAFLILSYCGKKKLEESI---SVDLIQSMKNLPMTEFESQLWRLVGQKCI 518
LL+L +LEFRK FLIL+Y G++K+E+ I V I M PM+ FES +W G C
Sbjct: 244 LLALSKLEFRKFFLILNYIGRRKVEDVIMLHDVGDILDMIYQPMSHFESYIWNKYGHLC- 302
Query: 519 EETDRSKSLDWDSGRTYIYRCYVDPDGSYTFKGPHLHLQKQKTHLQRVLGDDNVLDVRFA 698
E R + LDWDSGRT++Y C+V DGSYTFKGP+L + ++THLQ+ LGD+NVL V+F
Sbjct: 303 EHNKRVQYLDWDSGRTHLYHCHVHSDGSYTFKGPYL--KAERTHLQQSLGDENVLIVKFE 360
Query: 699 EEVVNRNDFNRSNAGYQNIANEGIYVGLRRYQFFVFKDGGKEE--KKKSLTSSPVKCYFV 872
+ + I GI VGLRRY+FFV+KD GK+ K K VKCYFV
Sbjct: 361 QNTPGCPE---------EIVQNGILVGLRRYRFFVYKDDGKKRSSKDKEEKIDSVKCYFV 411
Query: 873 RMESNASIDAEKPYIFSNKSIHEARSVFMHVHTVSSVAKYMARFSLILSKTLKLDVDHAS 1052
RMES + E YI +K +HEAR FMHVH VSS+AKYMARFSL LS T+KL VD S
Sbjct: 412 RMESLNPYEKET-YILRDKMVHEARCNFMHVHMVSSMAKYMARFSLTLSTTVKLQVDLNS 470
Query: 1053 VHIDTIEDIDCLDGDGRIIRNEDGEALIHTDGTGFISEDLALKCPRNVYKGHYSSHGEFE 1232
V+ID IEDI C D GRII +EDG+ LIHTDGTG+ISEDLA KCP++ + + E
Sbjct: 471 VNIDRIEDICCHDKSGRIIYDEDGKPLIHTDGTGYISEDLARKCPQDFFNVKHRC-ANLE 529
Query: 1233 RNLDRIEFEDKSSELTKSTSHIREPPLLIQFRLFNNGRAVKGTFLVNKKLPPKTIQIRPS 1412
R + ++ + SSEL ++ EPPLL+Q RLF NG AVKGT LVN+KLP +TIQIRPS
Sbjct: 530 RYTNGVKLGENSSELGEAEFQSGEPPLLMQCRLFYNGLAVKGTLLVNRKLPRRTIQIRPS 589
Query: 1413 MIKVDTDPKHLDTQTANSLEIVSTSNRPRKTSYLSRFLIAHLNYGGVPREYFMELLMNAL 1592
MIKV+ DP+ Q NSLEI + S +PR T YLSR LIA L YGGVP EYF ++L N L
Sbjct: 590 MIKVEADPRLSRAQMFNSLEINTPSLKPRNT-YLSRTLIALLTYGGVPVEYFYDILNNTL 648
Query: 1593 EAAQSVHYNKSEALTVSLRYGEMDDF-LVPRMILCGIPLNEPYLQYRMSVLLKEERKGLK 1769
E Q ++ ++ AL V++ + + DD MI+ G+PL EPYL +S L KEER GLK
Sbjct: 649 EETQRLYSDEVTALKVAVNHRDRDDASTATSMIMAGVPLTEPYLWCCLSSLAKEERNGLK 708
Query: 1770 VGKLPVSECYYLMGTADPTGMLNSDQVCIILDSGQISGKVLVYKHPGLHFGDIHVLTATY 1949
G+LP+++ +YLMGTADPT LN +VC+IL+ GQI G+VLVY++PGLHFGDIH L A
Sbjct: 709 GGRLPIADTFYLMGTADPTDTLNPHEVCVILEHGQIFGEVLVYRNPGLHFGDIHRLLAVP 768
Query: 1950 VKDLELIVGNAKYAIFFPTKGPRSLADEMANSDFDGDMYWVSRNPQLLQYFQPSEPWKRP 2129
VK+L IVGNAKY IFF TKGPRS A E+AN DFDGD YWVS+NPQLL+YF S PW R
Sbjct: 769 VKNLGDIVGNAKYGIFFSTKGPRSAATEIANGDFDGDKYWVSQNPQLLKYFTASRPWSRI 828
Query: 2130 HSAKCVCHQKPTDFSTDELENVLFQQFLTARFPLSNTLGMAADSWLSFMDRVLTLGDECA 2309
HS H++P +FS +E E+ LFQ FL R P + ++ A+ +W + MDR+L LG
Sbjct: 829 HSTPKTLHREPNNFSAEEREHDLFQTFLETRMP-NYSMADASANWYALMDRLLILGKNNT 887
Query: 2310 AEK---CRVKEKMLQLVDIYYDALDASKTGKKVEVPNELKADKFPHFMKRANSYYSKSIL 2480
E VKEK+ +L+D+YYDA+DA K+G KV +P LK DKFPHF+++ SY+S S+L
Sbjct: 888 TENEEIKSVKEKLFELIDLYYDAIDAPKSGNKVYIPKRLKVDKFPHFLQKKESYHSTSVL 947
Query: 2481 GLIYDKVDSFQATELPSKEVWKLPCFSGEAPVSCLKSWKDHYDHYRNEMTHALKLDSESR 2660
G IYD+V+ F+A E + E+ KL F P +CL+ W++ Y +YR EM AL SES+
Sbjct: 948 GEIYDRVEKFKAEEPAAVEIKKLSAFEVGIPDTCLRLWEERYRNYRFEMKEALNTSSESK 1007
Query: 2661 QVAADEVIQKYKQKLYGAAEFEESARKQEEIFNEALAIYEISYDYAKKINDVGKCSFAWR 2840
AD+VI+KYKQ LY A + EES R +++N+ALAIY ++YDYAK I DV KC FAW+
Sbjct: 1008 NDLADQVIKKYKQLLYEAPDMEESIRSTTDMYNDALAIYCVTYDYAKAIGDVRKCGFAWK 1067
Query: 2841 VAGRALCMLHASNQDKD----TIVCVKSVLREVLN 2933
VAG ALC LHA K+ + S+L ++LN
Sbjct: 1068 VAGAALCKLHAELHAKEHNQKVMAMSPSILHKLLN 1102
>ref|XP_004513037.1| PREDICTED: probable RNA-dependent RNA polymerase 5-like [Cicer
arietinum]
Length = 997
Score = 843 bits (2177), Expect = 0.0
Identities = 472/1002 (47%), Positives = 643/1002 (64%), Gaps = 27/1002 (2%)
Frame = +3
Query: 3 ICEEQSLLSPDIRARRELSLLGEEASLQLLQRT------RNLSDYIIYMAGV-------S 143
I E+QS D RR L+ LGE+ +LQ+L R+L+ + +YM S
Sbjct: 19 IREQQSQPPLDSSIRRNLAELGEQKALQILYYISTQPIKRSLNAFTVYMINQHRSPPSPS 78
Query: 144 DPVSSQEXXXXXXXXXXXXXXXXXXXXXXTKLPFSNLEEPKPKGQMNLNXXXXXXXXXXX 323
P SSQ ++ P P +L
Sbjct: 79 RPSSSQSQSQSQSQSRPYSLQSQLLSHLQSR------PSPLPLRSQSLPSSSTAPPPHSD 132
Query: 324 XXXXXXXHLLSLGELEFRKAFLILSYCGKKKLEESISVDLIQSMKNLPMTEFESQLWRLV 503
L +LGELEFRK+FL++SY G++ +E ++ + ++S+K L M FE ++W V
Sbjct: 133 V-------LTALGELEFRKSFLLMSYAGRENIENVVTAEYVRSLKELTMKNFEKEIWETV 185
Query: 504 GQKCIEE-TDRSKSLDWDSGRTYIYRCYVDPDGSYTFKGPHLHLQKQKTHLQRVLGDDNV 680
GQK IE TDR LDWDSGRT+IY+C+V P+GS FKGP L Q +THLQ+ LGDDNV
Sbjct: 186 GQKYIERPTDRLVYLDWDSGRTHIYQCFVSPNGSLRFKGPIL--QHTRTHLQKSLGDDNV 243
Query: 681 LDVRFAEEVVNRNDFNRSNAG---YQNIANEGIYVGLRRYQFFVFKDGGKEEKKKSLTSS 851
L V+FAE+ R + Y+ EG+ VGLR Y+FFVFK GGKEEKKK T+S
Sbjct: 244 LLVKFAEDQYARKSETSAQKAAKHYEKFGKEGLRVGLRLYRFFVFKVGGKEEKKKDPTTS 303
Query: 852 PVKCYFVRMESNASIDAEKPYIFSNKSIHEARSVFMHVHTVSSVAKYMARFSLILSKTLK 1031
VKCYFVR ES+ S D + YI SN+++ E+RS+FMH H + ++ KYMARFSLILSKT K
Sbjct: 304 SVKCYFVRTESSCSTDERESYILSNRTMFESRSLFMHAHMLPNIDKYMARFSLILSKTYK 363
Query: 1032 LDVDHASVHIDTIEDIDCLDGDGRIIRNEDGEALIHTDGTGFISEDLALKCPRNVYKGHY 1211
L+VD +V + TI D+ C D G + + + ++ TDGTGFISEDLA+ CP NV KG
Sbjct: 364 LNVDWTTVSVKTIPDVCCQDEHGNTVYHNEKRCIL-TDGTGFISEDLAVLCPNNVLKGSN 422
Query: 1212 SSHGEFERNLDRIEFEDKSSELTKSTSHIREPPLLIQFRLFNNGRAVKGTFLVNKKLPPK 1391
+ + + ++ ED S + ++ +PPLLIQ RLF+ G A+KGT LVNKKL P
Sbjct: 423 LKNTHIKEISNLVKLEDMSKAMGEAALSKHQPPLLIQCRLFHMGCAMKGTLLVNKKLSPS 482
Query: 1392 TIQIRPSMIKVDTDPKHLDTQTANSLEIVSTSNRPRKTSYLSRFLIAHLNYGGVPREYFM 1571
TIQ+RPSMIKV TDP + Q+ NS+E+V+TS++P + +YLS++LIA L+YG VP E+FM
Sbjct: 483 TIQVRPSMIKVMTDPSLSNIQSLNSMEVVNTSHKPNR-AYLSKYLIALLSYGRVPNEFFM 541
Query: 1572 ELLMNALEAAQSVHYNKSEALTVSLRYGEMDDFLVPRMILCGIPLNEPYLQYRMSVLLKE 1751
++L + LE A ++ NK AL SL Y EMDDF MILCGIPL+EP+LQ+ +S L+K
Sbjct: 542 DVLKSNLEDAGHIYTNKRAALRASLNYAEMDDFNAAGMILCGIPLDEPFLQHYLSKLVKL 601
Query: 1752 ERKGLKVGKLPVSECYYLMGTADPTG--MLNSDQVCIILDSGQISGKVLVYKHPGLHFGD 1925
E+ L+ GKL V +C+YLMGT DPT L ++QVCII ++GQI+G VLVY++PGLHFGD
Sbjct: 602 EKNKLRTGKLYVEDCFYLMGTVDPTEGHCLEANQVCIIHENGQITGDVLVYRNPGLHFGD 661
Query: 1926 IHVLTATYVKDLELIVGNAKYAIFFPTKGPRSLADEMANSDFDGDMYWVSRNPQLLQYFQ 2105
IH++ ATYV+ LE VG+ KYAIFFP GPRS+ADE+A DFDGDMYWVS+NPQLL+ F+
Sbjct: 662 IHIMQATYVEGLESYVGHGKYAIFFPCVGPRSVADEIAGGDFDGDMYWVSKNPQLLECFR 721
Query: 2106 PSEPWKRPHSAKCVCHQKPTDFSTDEL---ENVLFQQFLTARFPLSNTLGMAADSWLSFM 2276
S+PW S C P S+ + E LF+ +L RF S+ +G+AADSW++ M
Sbjct: 722 KSDPWM--ESPPC----NPVILSSSVIKPSEEELFKLYLQTRFQSSSAIGIAADSWMALM 775
Query: 2277 DRVLTLGDECAAEK--CRVKEKMLQLVDIYYDALDA-SKTGKKVEVPNELKADKFPHFMK 2447
DR+LTL ++ EK +VKE +L+L+DIYY+ALDA K G K++VP +L + FPH+M+
Sbjct: 776 DRLLTLRNDITKEKEVLQVKENILKLIDIYYEALDAPKKGGGKIQVPEDLTVELFPHYME 835
Query: 2448 R-ANSYYSKSILGLIYDKVDSFQATELPSKEVWKLPCFSGEAPVSCLKSWKDHYDHYRNE 2624
R S+ S SILGLIYD+V +Q +++ ++ KLPC E P+ C++ W+ Y YR +
Sbjct: 836 RDGKSFTSTSILGLIYDEVCRWQTSDMSGTKIRKLPCLDVEIPMHCVEKWETLYKEYRTD 895
Query: 2625 MTHALKLDSESRQVAADEVIQKYKQKLYGAAEFEESARKQEEIFNEALAIYEISYDYAKK 2804
M+ A + S S++ AA EVI+KYKQK AA E+ ++ +I++EALA+Y ++YDYA +
Sbjct: 896 MSFACQ--SNSKEEAA-EVIKKYKQKFDVAANIEDCSKNVTDIYHEALAVYHVTYDYAIQ 952
Query: 2805 INDVGKCSFAWRVAGRALCMLHASNQD-KDTIVCVKSVLREV 2927
NDV KC+FAW+VAG AL A NQ + C SVLRE+
Sbjct: 953 WNDVAKCAFAWKVAGPALTNYCAENQSHSKCLPCSSSVLREI 994
>gb|EEE54052.1| hypothetical protein OsJ_00745 [Oryza sativa Japonica Group]
Length = 1243
Score = 828 bits (2139), Expect = 0.0
Identities = 442/901 (49%), Positives = 603/901 (66%), Gaps = 40/901 (4%)
Frame = +3
Query: 348 LLSLGELEFRKAFLILSYCGKKKLEESISVDLIQSMKNLPMTEFESQLWRLVGQKCIEET 527
+L+L EL FRK F++ +Y +K+E +SVD I+S+K L M +FESQ+WR G K I +
Sbjct: 346 MLALEELGFRKIFMVFAYLASEKIENVLSVDYIRSLKFLSMAQFESQIWRTFGHKYIAAS 405
Query: 528 DRSKSLDWDSGRTYIYRCYVDPDGSYT---FKGPHLHLQKQKTHLQRVLGDDNVLDVRFA 698
DR+K+LD D G T +Y C V G FKGP++ + +THLQ+V+GDDNVL V+F
Sbjct: 406 DRAKNLDSDPGMTKVYHCNVAIRGDTVVKIFKGPYI--ENTRTHLQKVVGDDNVLVVKFM 463
Query: 699 EEVVN-RNDFNRSNAGYQNIANEGIYVGLRRYQFFVFKDGGKEEK-------KKSLTSSP 854
++ + + DF+ Y +A +GI +GLRRY+FFV+KDGGKEEK K+ +SP
Sbjct: 464 GKLSDTKTDFSTYCEHYHKVAEDGIVLGLRRYRFFVYKDGGKEEKLKQEKIEDKNKCTSP 523
Query: 855 VKCYFVRMESNASIDAEKPYIFSNKSIHEARSVFMHVHTVSSVAKYMARFSLILSKTLKL 1034
V CYFVR ES ++D +PYI S +++ +AR +FMH+ + ++AKYMARF+LILSKT+
Sbjct: 524 VMCYFVRTESGWNMD--EPYILSGRTVGQARELFMHISSAPTLAKYMARFALILSKTITW 581
Query: 1035 DVDHASVHIDTIEDIDCLDGDGRIIRNEDGEALIHTDGTGFISEDLALKCPRNVYKGHYS 1214
D D ++V++ I+D C+D G ++ ++D E LIHTDGTG +S DLAL CP +++KG +
Sbjct: 582 DADLSAVYVRRIKDEPCMDRHGNVV-HKDQEPLIHTDGTGLVSVDLALNCPTSIFKGKFL 640
Query: 1215 SHGEFERNLDRIEFEDKSSELTKSTSHIREPPLLIQFRLFNNGRAVKGTFLVNKKLPPKT 1394
D E + + L + S E PLL+QFRLF NG AVKGT LV+++LPP T
Sbjct: 641 KPQGIA-TCDESETVMRPNSLKRHRSLTAEHPLLMQFRLFYNGSAVKGTVLVDRRLPPAT 699
Query: 1395 IQIRPSMIKVDTDP--------------------KHLD-TQTANSLEIVSTSNRPRKTSY 1511
I IRPSM+K++T P K L Q+ NS EIVSTSNRPR+T
Sbjct: 700 ILIRPSMVKIETHPELSGVRSVNSSEIVSARNAKKSLSGVQSVNSFEIVSTSNRPRRT-L 758
Query: 1512 LSRFLIAHLNYGGVPREYFMELLMNALEAAQSVHYNKSEALTVSLRYGEMDDFLVPRMIL 1691
SRFLI L YGGVP EYF+ELL +A+E A++ Y+ +AL ++ Y +M+D + RMIL
Sbjct: 759 TSRFLITLLCYGGVPEEYFLELLQSAIEGAENACYDYEDALRIAFSYADMEDSMSARMIL 818
Query: 1692 CGIPLNEPYLQYRMSVLLKEERKGLKVGKLPVSECYYLMGTADPTGMLNSDQVCIILDSG 1871
GIPL E YLQ+R+ + ++ERKG+K GK+P+ ECYYLM T DPTG L ++VC+IL++G
Sbjct: 819 SGIPLEESYLQHRLDFMAQQERKGIKQGKIPIDECYYLMDTTDPTGTLRPNEVCVILENG 878
Query: 1872 QISGKVLVYKHPGLHFGDIHVLTATYVKDLEL-IVGNAKYAIFFPTKGPRSLADEMANSD 2048
Q SG VLVYKHPGLHFGDIHVL ATY++DLE VG AKYAI FP GPRSLADEMANSD
Sbjct: 879 QFSGDVLVYKHPGLHFGDIHVLKATYIRDLEKEYVGYAKYAILFPISGPRSLADEMANSD 938
Query: 2049 FDGDMYWVSRNPQLLQYFQPSEPWKRPHSAKCVCHQKPTDFSTDELENVLFQQFLTARFP 2228
FDGD+YWVS+NP+LL++F+PSEPW + K +KP D + +LE +LF +FL RF
Sbjct: 939 FDGDIYWVSKNPKLLEHFKPSEPWVQAIKPKKTKQKKPQDCNESKLERLLFHEFLKTRFT 998
Query: 2229 LSNTLGMAADSWLSFMDRVLTLG-DECAAEKCRVKEKMLQLVDIYYDALDASKTGKKVEV 2405
S LG AADSWL++MDR+LT DE EK ++EKML+LVD+YY ALDA KTG KV +
Sbjct: 999 PSFALGTAADSWLAYMDRLLTDSLDE--IEKKLIEEKMLKLVDLYYLALDAPKTGNKVNI 1056
Query: 2406 PNELKADKFPHFMKRANSYYSKSILGLIYDK---VDSFQATELPSKEVWKLPCF-SGEAP 2573
P++L ++PHFM R+ SY+S SILG IYDK V+S ++ + V LPCF EAP
Sbjct: 1057 PSDLMVKQYPHFMGRSFSYHSSSILGQIYDKAEDVESLRSCNVQPIGVSLLPCFMEREAP 1116
Query: 2574 VSCLKSWKDHYDHYRNE--MTHALKLDSESRQVAADEVIQKYKQKLYGAAEFEESARKQE 2747
+ W+ Y+ Y + M + +D E R + E+ +KYK LY A+EFE++ R +
Sbjct: 1117 PAARHLWQHRYEEYLTDSTMLYRAMVDKEERNMKFQELYEKYKHMLYDASEFEQTQRDPD 1176
Query: 2748 EIFNEALAIYEISYDYAKKINDVGKCSFAWRVAGRALCMLHASNQDKDTIVCVKSVLREV 2927
++F+EA IY+I Y+ A+ ND +C FAW+VAGRALC +A + DT +C +LR++
Sbjct: 1177 DVFSEACVIYQIVYEKARWSNDASRCGFAWKVAGRALCHFYALKNEGDTALCSLPLLRKI 1236
Query: 2928 L 2930
+
Sbjct: 1237 I 1237