BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Akebia27_contig00006816
         (1323 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI22720.3| unnamed protein product [Vitis vinifera]              440   e-133
ref|XP_002267664.2| PREDICTED: DNA-directed RNA polymerase III s...   408   e-123
ref|XP_006421933.1| hypothetical protein CICLE_v10004721mg [Citr...   348   e-106
emb|CBI26210.3| unnamed protein product [Vitis vinifera]              362   e-106
ref|XP_006490401.1| PREDICTED: DNA-directed RNA polymerase III s...   348   e-106
ref|XP_006421932.1| hypothetical protein CICLE_v10004721mg [Citr...   348   e-106
ref|XP_007038704.1| RNA polymerase III subunit RPC82 family prot...   348   e-106
ref|XP_006490400.1| PREDICTED: DNA-directed RNA polymerase III s...   346   e-106
gb|EXC19135.1| DNA-directed RNA polymerase III subunit RPC3 [Mor...   336   e-102
ref|XP_004240730.1| PREDICTED: DNA-directed RNA polymerase III s...   319   9e-97
ref|XP_006363319.1| PREDICTED: DNA-directed RNA polymerase III s...   319   1e-96
ref|XP_002510780.1| DNA-directed RNA polymerase III 62 kDa polyp...   308   7e-94
ref|XP_006374620.1| hypothetical protein POPTR_0015s13040g [Popu...   299   6e-90
ref|XP_007219003.1| hypothetical protein PRUPE_ppa004195mg [Prun...   298   1e-88
emb|CAN75989.1| hypothetical protein VITISV_012194 [Vitis vinifera]   329   1e-87
ref|XP_002321920.2| RNA polymerase 3 subunit RPC82 family protei...   299   4e-87
ref|XP_004140835.1| PREDICTED: DNA-directed RNA polymerase III s...   287   1e-86
ref|XP_004168254.1| PREDICTED: DNA-directed RNA polymerase III s...   284   8e-86
ref|XP_004308082.1| PREDICTED: DNA-directed RNA polymerase III s...   287   2e-85
ref|XP_007143425.1| hypothetical protein PHAVU_007G071300g [Phas...   282   7e-85

>emb|CBI22720.3| unnamed protein product [Vitis vinifera]
          Length = 524

 Score =  440 bits (1132), Expect(2) = e-133
 Identities = 230/337 (68%), Positives = 266/337 (78%)
 Frame = -1

Query: 1323 KVCECLLRKGTLTLTEISRYTEIPSQQVKNYLLVLIQHNCVQAFAIQQEGGFGVQPRVVT 1144
            KVC+CLLRKGTLTL  + R+TE+P QQVK+ +LVLIQHNCVQAFAIQQE GFG  PRVVT
Sbjct: 24   KVCDCLLRKGTLTLASVIRFTELPPQQVKSCILVLIQHNCVQAFAIQQEVGFGEAPRVVT 83

Query: 1143 QYTVVFENILHRLRFSKFLVIVSKALGKECVELLEGLLQHGRLTLEQIILRAISNKNEGN 964
            QY  +F NILHR+RF+KFL IVS+ L KEC E+LEGLLQHGRLTLEQI+ RA SN++EG 
Sbjct: 84   QYMALFHNILHRMRFAKFLAIVSEELDKECEEILEGLLQHGRLTLEQILDRAKSNQSEGE 143

Query: 963  SAFQDALRTSFVKLVNARYVERCPAAEPFLAPPSEDETPSAGKRGAKSAKLIEERVTVEQ 784
               QDALR SF+KLV A +VERCPA+EPFLAPPSE+ETP A KRGAKSAKL+EE  T+EQ
Sbjct: 144  PVVQDALRESFLKLVRAHFVERCPASEPFLAPPSEEETP-ARKRGAKSAKLVEEPQTIEQ 202

Query: 783  RATTAATPLEAERFSITTDTGTDVTSEAKSGGDPPPTTVGEKRKHETLEMDSKVMATICE 604
            RA  AA P++A+RFS+  +TGTDV        D P  T GEKRK + LE+D +  A+ CE
Sbjct: 203  RAIAAAAPMDAKRFSVIINTGTDV-------DDSPNVTAGEKRKQDALELDKETGAS-CE 254

Query: 603  KEVLWRANFEEFVRLLRIKACVTNVRSRLDDNAGIVLNAMLEATRRVEKKNKTEYSAPLS 424
            K+VLWRANFEEFVR LR KAC+ NV++RLDD A IVL+AMLEATR  EKK KTE S PLS
Sbjct: 255  KDVLWRANFEEFVRCLRHKACIANVKTRLDDGAAIVLSAMLEATRSEEKKVKTENSVPLS 314

Query: 423  MDAILEEVMKSEEGRSMTVEHVRAALSQLGCHPNARG 313
            MD I E VMKSE GRSMT+E VR +L QLGC P  RG
Sbjct: 315  MDTIFEGVMKSEAGRSMTLERVRGSLIQLGCAPCVRG 351



 Score = 63.2 bits (152), Expect(2) = e-133
 Identities = 30/41 (73%), Positives = 37/41 (90%)
 Frame = -2

Query: 302 IIEMAQNEEVESTVLKRYGRDAYRMFRLLSKAGRLVLTDQV 180
           IIE+AQN+EVES  LKRYGRDAYR+FRLLSK+ RL+ TD++
Sbjct: 363 IIELAQNDEVESITLKRYGRDAYRIFRLLSKSCRLLETDKI 403


>ref|XP_002267664.2| PREDICTED: DNA-directed RNA polymerase III subunit RPC3 [Vitis
            vinifera]
          Length = 511

 Score =  408 bits (1048), Expect(2) = e-123
 Identities = 222/337 (65%), Positives = 257/337 (76%)
 Frame = -1

Query: 1323 KVCECLLRKGTLTLTEISRYTEIPSQQVKNYLLVLIQHNCVQAFAIQQEGGFGVQPRVVT 1144
            KVC+CLLRKGTLTL  + R+TE+P QQVK+ +LVLIQHNCVQAFAIQQE      PRVVT
Sbjct: 24   KVCDCLLRKGTLTLASVIRFTELPPQQVKSCILVLIQHNCVQAFAIQQEA-----PRVVT 78

Query: 1143 QYTVVFENILHRLRFSKFLVIVSKALGKECVELLEGLLQHGRLTLEQIILRAISNKNEGN 964
            QY  +F NILHR+RF+KFL IVS+ L KEC E+LEGLLQHGRLTLEQI+ RA SN+ E  
Sbjct: 79   QYMALFHNILHRMRFAKFLAIVSEELDKECEEILEGLLQHGRLTLEQILDRAKSNQRE-- 136

Query: 963  SAFQDALRTSFVKLVNARYVERCPAAEPFLAPPSEDETPSAGKRGAKSAKLIEERVTVEQ 784
               QDALR SF+KLV A +VERCPA+EPFLAPPSE+ETP A KRGAKSAKL+EE  T+EQ
Sbjct: 137  PVVQDALRESFLKLVRAHFVERCPASEPFLAPPSEEETP-ARKRGAKSAKLVEEPQTIEQ 195

Query: 783  RATTAATPLEAERFSITTDTGTDVTSEAKSGGDPPPTTVGEKRKHETLEMDSKVMATICE 604
            RA  AA P++A+RFS+  +TGTDV        D P       RK + LE+D +  A+ CE
Sbjct: 196  RAIAAAAPMDAKRFSVIINTGTDVD-------DSP------NRKQDALELDKETGAS-CE 241

Query: 603  KEVLWRANFEEFVRLLRIKACVTNVRSRLDDNAGIVLNAMLEATRRVEKKNKTEYSAPLS 424
            K+VLWRANFEEFVR LR KAC+ NV++RLDD A IVL+AMLEATR  EKK KTE S PLS
Sbjct: 242  KDVLWRANFEEFVRCLRHKACIANVKTRLDDGAAIVLSAMLEATRSEEKKVKTENSVPLS 301

Query: 423  MDAILEEVMKSEEGRSMTVEHVRAALSQLGCHPNARG 313
            MD I E VMKSE GRSMT+E VR +L QLGC P  RG
Sbjct: 302  MDTIFEGVMKSEAGRSMTLERVRGSLIQLGCAPCVRG 338



 Score = 63.2 bits (152), Expect(2) = e-123
 Identities = 30/41 (73%), Positives = 37/41 (90%)
 Frame = -2

Query: 302 IIEMAQNEEVESTVLKRYGRDAYRMFRLLSKAGRLVLTDQV 180
           IIE+AQN+EVES  LKRYGRDAYR+FRLLSK+ RL+ TD++
Sbjct: 350 IIELAQNDEVESITLKRYGRDAYRIFRLLSKSCRLLETDKI 390


>ref|XP_006421933.1| hypothetical protein CICLE_v10004721mg [Citrus clementina]
            gi|568874593|ref|XP_006490399.1| PREDICTED: DNA-directed
            RNA polymerase III subunit RPC3-like isoform X1 [Citrus
            sinensis] gi|557523806|gb|ESR35173.1| hypothetical
            protein CICLE_v10004721mg [Citrus clementina]
          Length = 527

 Score =  348 bits (894), Expect(2) = e-106
 Identities = 185/330 (56%), Positives = 240/330 (72%)
 Frame = -1

Query: 1323 KVCECLLRKGTLTLTEISRYTEIPSQQVKNYLLVLIQHNCVQAFAIQQEGGFGVQPRVVT 1144
            KVCECLLRKG LT   + RYTE+  +QVKN LLVLIQ NCVQAF  +Q  GF   P+  T
Sbjct: 24   KVCECLLRKGPLTRQNVKRYTELSDEQVKNALLVLIQQNCVQAFTTEQPDGFADGPKANT 83

Query: 1143 QYTVVFENILHRLRFSKFLVIVSKALGKECVELLEGLLQHGRLTLEQIILRAISNKNEGN 964
            QY V+F+NILHR+RF+KFL I+S+   ++CVEL++GLL+HGRLTL+Q+  RA S++ EGN
Sbjct: 84   QYVVLFDNILHRVRFAKFLTILSQEFDQQCVELVQGLLEHGRLTLKQMFDRAKSSEKEGN 143

Query: 963  SAFQDALRTSFVKLVNARYVERCPAAEPFLAPPSEDETPSAGKRGAKSAKLIEERVTVEQ 784
                D+LR + VKLV A YVERCPA+EP L P SE+E P A K+G+KSAK I E  T+EQ
Sbjct: 144  LVDLDSLRETLVKLVTAHYVERCPASEPLLMPISEEEGP-ARKKGSKSAKKIGEPETIEQ 202

Query: 783  RATTAATPLEAERFSITTDTGTDVTSEAKSGGDPPPTTVGEKRKHETLEMDSKVMATICE 604
            +   AA P+EA RFS+ T+  +DV  + K+  +  P   GEKRKH+ LE+D   +A   E
Sbjct: 203  QVVEAALPMEAMRFSVVTNVESDVGEKEKNSNNVTP---GEKRKHDVLELDECGVAD--E 257

Query: 603  KEVLWRANFEEFVRLLRIKACVTNVRSRLDDNAGIVLNAMLEATRRVEKKNKTEYSAPLS 424
            + V++RANFE F+R LR K C+ +VR+ LDD A  VL+AML+AT   EKK KT+ S PLS
Sbjct: 258  QSVVYRANFEGFIRRLRHKGCIDHVRAHLDDGAANVLSAMLQATSSAEKKVKTKNSVPLS 317

Query: 423  MDAILEEVMKSEEGRSMTVEHVRAALSQLG 334
            + +I EEV+KSE GR+MT++HVRA+L QLG
Sbjct: 318  LSSIYEEVIKSEAGRNMTLDHVRASLVQLG 347



 Score = 67.0 bits (162), Expect(2) = e-106
 Identities = 32/41 (78%), Positives = 38/41 (92%)
 Frame = -2

Query: 302 IIEMAQNEEVESTVLKRYGRDAYRMFRLLSKAGRLVLTDQV 180
           IIE+AQNEEVES V KRYGRDAYR+FRLLSK+GRL+ TD++
Sbjct: 366 IIEIAQNEEVESVVSKRYGRDAYRIFRLLSKSGRLLETDKI 406


>emb|CBI26210.3| unnamed protein product [Vitis vinifera]
          Length = 517

 Score =  362 bits (928), Expect(2) = e-106
 Identities = 195/337 (57%), Positives = 238/337 (70%)
 Frame = -1

Query: 1323 KVCECLLRKGTLTLTEISRYTEIPSQQVKNYLLVLIQHNCVQAFAIQQEGGFGVQPRVVT 1144
            KVC+CLLRKGTL L +I R  ++  QQVK YL VLIQHNCVQAFA++ EGG G  P VVT
Sbjct: 24   KVCDCLLRKGTLALDDIVRTAKLSPQQVKTYLKVLIQHNCVQAFAMEHEGGCGEGPVVVT 83

Query: 1143 QYTVVFENILHRLRFSKFLVIVSKALGKECVELLEGLLQHGRLTLEQIILRAISNKNEGN 964
            QY ++F+NILHR+RF K L IVSK L KEC EL E  L+HG LTL+QI+ R  SN+NEGN
Sbjct: 84   QYMLLFDNILHRMRFPKLLAIVSKELDKECEELFEAFLKHGWLTLQQILDRVPSNQNEGN 143

Query: 963  SAFQDALRTSFVKLVNARYVERCPAAEPFLAPPSEDETPSAGKRGAKSAKLIEERVTVEQ 784
               QDALR SF KLVNA YVERCPA +PFL PP E++TP A K  A SAK +EE    EQ
Sbjct: 144  CTVQDALRGSFTKLVNAHYVERCPAPDPFLVPPDEEKTP-ARKHDANSAKAVEELEIGEQ 202

Query: 783  RATTAATPLEAERFSITTDTGTDVTSEAKSGGDPPPTTVGEKRKHETLEMDSKVMATICE 604
                 ATP +A+ F + TDT  D+  + KS G+PP   +G+KRK + L++D++  A   E
Sbjct: 203  CDIAKATPSKAKGFPVITDTCGDINGD-KSIGNPPGVVIGKKRKQDALKLDTESGAA-SE 260

Query: 603  KEVLWRANFEEFVRLLRIKACVTNVRSRLDDNAGIVLNAMLEATRRVEKKNKTEYSAPLS 424
            K+V WRAN++E V  LR KAC+ NVR+RLD  A IVL+AMLEAT+  EK  K E S  LS
Sbjct: 261  KDVPWRANYKELVCHLRHKACIENVRARLDSGAAIVLSAMLEATQSAEKNVKEEISVLLS 320

Query: 423  MDAILEEVMKSEEGRSMTVEHVRAALSQLGCHPNARG 313
            +  I E VM+SE G SMT+E +RA+L QLGCHPN  G
Sbjct: 321  ISTITEAVMQSEAGCSMTLERIRASLVQLGCHPNGVG 357



 Score = 53.9 bits (128), Expect(2) = e-106
 Identities = 25/32 (78%), Positives = 31/32 (96%)
 Frame = -2

Query: 302 IIEMAQNEEVESTVLKRYGRDAYRMFRLLSKA 207
           IIE+AQN+EVES VLKRYGR+A+R+FRLLSK+
Sbjct: 369 IIELAQNDEVESMVLKRYGREAHRIFRLLSKS 400


>ref|XP_006490401.1| PREDICTED: DNA-directed RNA polymerase III subunit RPC3-like isoform
            X3 [Citrus sinensis]
          Length = 444

 Score =  348 bits (894), Expect(2) = e-106
 Identities = 185/330 (56%), Positives = 240/330 (72%)
 Frame = -1

Query: 1323 KVCECLLRKGTLTLTEISRYTEIPSQQVKNYLLVLIQHNCVQAFAIQQEGGFGVQPRVVT 1144
            KVCECLLRKG LT   + RYTE+  +QVKN LLVLIQ NCVQAF  +Q  GF   P+  T
Sbjct: 24   KVCECLLRKGPLTRQNVKRYTELSDEQVKNALLVLIQQNCVQAFTTEQPDGFADGPKANT 83

Query: 1143 QYTVVFENILHRLRFSKFLVIVSKALGKECVELLEGLLQHGRLTLEQIILRAISNKNEGN 964
            QY V+F+NILHR+RF+KFL I+S+   ++CVEL++GLL+HGRLTL+Q+  RA S++ EGN
Sbjct: 84   QYVVLFDNILHRVRFAKFLTILSQEFDQQCVELVQGLLEHGRLTLKQMFDRAKSSEKEGN 143

Query: 963  SAFQDALRTSFVKLVNARYVERCPAAEPFLAPPSEDETPSAGKRGAKSAKLIEERVTVEQ 784
                D+LR + VKLV A YVERCPA+EP L P SE+E P A K+G+KSAK I E  T+EQ
Sbjct: 144  LVDLDSLRETLVKLVTAHYVERCPASEPLLMPISEEEGP-ARKKGSKSAKKIGEPETIEQ 202

Query: 783  RATTAATPLEAERFSITTDTGTDVTSEAKSGGDPPPTTVGEKRKHETLEMDSKVMATICE 604
            +   AA P+EA RFS+ T+  +DV  + K+  +  P   GEKRKH+ LE+D   +A   E
Sbjct: 203  QVVEAALPMEAMRFSVVTNVESDVGEKEKNSNNVTP---GEKRKHDVLELDECGVAD--E 257

Query: 603  KEVLWRANFEEFVRLLRIKACVTNVRSRLDDNAGIVLNAMLEATRRVEKKNKTEYSAPLS 424
            + V++RANFE F+R LR K C+ +VR+ LDD A  VL+AML+AT   EKK KT+ S PLS
Sbjct: 258  QSVVYRANFEGFIRRLRHKGCIDHVRAHLDDGAANVLSAMLQATSSAEKKVKTKNSVPLS 317

Query: 423  MDAILEEVMKSEEGRSMTVEHVRAALSQLG 334
            + +I EEV+KSE GR+MT++HVRA+L QLG
Sbjct: 318  LSSIYEEVIKSEAGRNMTLDHVRASLVQLG 347



 Score = 67.0 bits (162), Expect(2) = e-106
 Identities = 32/41 (78%), Positives = 38/41 (92%)
 Frame = -2

Query: 302 IIEMAQNEEVESTVLKRYGRDAYRMFRLLSKAGRLVLTDQV 180
           IIE+AQNEEVES V KRYGRDAYR+FRLLSK+GRL+ TD++
Sbjct: 366 IIEIAQNEEVESVVSKRYGRDAYRIFRLLSKSGRLLETDKI 406


>ref|XP_006421932.1| hypothetical protein CICLE_v10004721mg [Citrus clementina]
            gi|557523805|gb|ESR35172.1| hypothetical protein
            CICLE_v10004721mg [Citrus clementina]
          Length = 433

 Score =  348 bits (894), Expect(2) = e-106
 Identities = 185/330 (56%), Positives = 240/330 (72%)
 Frame = -1

Query: 1323 KVCECLLRKGTLTLTEISRYTEIPSQQVKNYLLVLIQHNCVQAFAIQQEGGFGVQPRVVT 1144
            KVCECLLRKG LT   + RYTE+  +QVKN LLVLIQ NCVQAF  +Q  GF   P+  T
Sbjct: 24   KVCECLLRKGPLTRQNVKRYTELSDEQVKNALLVLIQQNCVQAFTTEQPDGFADGPKANT 83

Query: 1143 QYTVVFENILHRLRFSKFLVIVSKALGKECVELLEGLLQHGRLTLEQIILRAISNKNEGN 964
            QY V+F+NILHR+RF+KFL I+S+   ++CVEL++GLL+HGRLTL+Q+  RA S++ EGN
Sbjct: 84   QYVVLFDNILHRVRFAKFLTILSQEFDQQCVELVQGLLEHGRLTLKQMFDRAKSSEKEGN 143

Query: 963  SAFQDALRTSFVKLVNARYVERCPAAEPFLAPPSEDETPSAGKRGAKSAKLIEERVTVEQ 784
                D+LR + VKLV A YVERCPA+EP L P SE+E P A K+G+KSAK I E  T+EQ
Sbjct: 144  LVDLDSLRETLVKLVTAHYVERCPASEPLLMPISEEEGP-ARKKGSKSAKKIGEPETIEQ 202

Query: 783  RATTAATPLEAERFSITTDTGTDVTSEAKSGGDPPPTTVGEKRKHETLEMDSKVMATICE 604
            +   AA P+EA RFS+ T+  +DV  + K+  +  P   GEKRKH+ LE+D   +A   E
Sbjct: 203  QVVEAALPMEAMRFSVVTNVESDVGEKEKNSNNVTP---GEKRKHDVLELDECGVAD--E 257

Query: 603  KEVLWRANFEEFVRLLRIKACVTNVRSRLDDNAGIVLNAMLEATRRVEKKNKTEYSAPLS 424
            + V++RANFE F+R LR K C+ +VR+ LDD A  VL+AML+AT   EKK KT+ S PLS
Sbjct: 258  QSVVYRANFEGFIRRLRHKGCIDHVRAHLDDGAANVLSAMLQATSSAEKKVKTKNSVPLS 317

Query: 423  MDAILEEVMKSEEGRSMTVEHVRAALSQLG 334
            + +I EEV+KSE GR+MT++HVRA+L QLG
Sbjct: 318  LSSIYEEVIKSEAGRNMTLDHVRASLVQLG 347



 Score = 67.0 bits (162), Expect(2) = e-106
 Identities = 32/41 (78%), Positives = 38/41 (92%)
 Frame = -2

Query: 302 IIEMAQNEEVESTVLKRYGRDAYRMFRLLSKAGRLVLTDQV 180
           IIE+AQNEEVES V KRYGRDAYR+FRLLSK+GRL+ TD++
Sbjct: 366 IIEIAQNEEVESVVSKRYGRDAYRIFRLLSKSGRLLETDKI 406


>ref|XP_007038704.1| RNA polymerase III subunit RPC82 family protein, putative isoform 1
            [Theobroma cacao] gi|508775949|gb|EOY23205.1| RNA
            polymerase III subunit RPC82 family protein, putative
            isoform 1 [Theobroma cacao]
          Length = 523

 Score =  348 bits (893), Expect(2) = e-106
 Identities = 192/333 (57%), Positives = 240/333 (72%)
 Frame = -1

Query: 1323 KVCECLLRKGTLTLTEISRYTEIPSQQVKNYLLVLIQHNCVQAFAIQQEGGFGVQPRVVT 1144
            KVCECLLRKG LTL  I R+TE+ S QVKN LLVLIQHNCVQAF ++Q G  G   ++ +
Sbjct: 24   KVCECLLRKGPLTLQAIVRFTELTSSQVKNSLLVLIQHNCVQAFILEQPGSHGDGAKLNS 83

Query: 1143 QYTVVFENILHRLRFSKFLVIVSKALGKECVELLEGLLQHGRLTLEQIILRAISNKNEGN 964
            QY  +F NI+HR RF KFL IVS+ L K+CVEL+E LL HGRLTL+Q+  RA S +NEG+
Sbjct: 84   QYIALFNNIIHRWRFPKFLTIVSQKLDKQCVELIEALLLHGRLTLKQMSDRAKSAQNEGD 143

Query: 963  SAFQDALRTSFVKLVNARYVERCPAAEPFLAPPSEDETPSAGKRGAKSAKLIEERVTVEQ 784
                DA+R +F+KL+NA +VERCPAAEP L  P+E+ET SA KR  KSAK++E + T+EQ
Sbjct: 144  DVILDAVREAFIKLLNAHFVERCPAAEPVLTKPTEEET-SARKRVPKSAKILEGKETLEQ 202

Query: 783  RATTAATPLEAERFSITTDTGTDVTSEAKSGGDPPPTTVGEKRKHETLEMDSKVMATICE 604
            R   AATP EA RF + T T        K   +    TVG+KRK + LE +++  AT  E
Sbjct: 203  RVLEAATPSEALRFLLVTRT-EPAADGGKDENNSSSMTVGKKRKLDALESETEGEAT-DE 260

Query: 603  KEVLWRANFEEFVRLLRIKACVTNVRSRLDDNAGIVLNAMLEATRRVEKKNKTEYSAPLS 424
            + VLWRANFEEF+R LR KA + NVR+ LDD A IV++AMLEATR  EKK KTE S PLS
Sbjct: 261  QVVLWRANFEEFIRRLRHKAFIENVRACLDDGAVIVISAMLEATRTAEKKVKTENSVPLS 320

Query: 423  MDAILEEVMKSEEGRSMTVEHVRAALSQLGCHP 325
            +++I EEV+KSEEGR++T + VRA+L QL C P
Sbjct: 321  LNSIYEEVIKSEEGRNITFDRVRASLVQLSCPP 353



 Score = 65.1 bits (157), Expect(2) = e-106
 Identities = 31/41 (75%), Positives = 36/41 (87%)
 Frame = -2

Query: 302 IIEMAQNEEVESTVLKRYGRDAYRMFRLLSKAGRLVLTDQV 180
           IIE+AQN+EVES VLKRYGRDAYRMFRLLS   RL+ TD++
Sbjct: 369 IIELAQNDEVESIVLKRYGRDAYRMFRLLSSTARLLETDKI 409


>ref|XP_006490400.1| PREDICTED: DNA-directed RNA polymerase III subunit RPC3-like isoform
            X2 [Citrus sinensis]
          Length = 512

 Score =  346 bits (888), Expect(2) = e-106
 Identities = 184/329 (55%), Positives = 239/329 (72%)
 Frame = -1

Query: 1323 KVCECLLRKGTLTLTEISRYTEIPSQQVKNYLLVLIQHNCVQAFAIQQEGGFGVQPRVVT 1144
            KVCECLLRKG LT   + RYTE+  +QVKN LLVLIQ NCVQAF  +Q  GF   P+  T
Sbjct: 24   KVCECLLRKGPLTRQNVKRYTELSDEQVKNALLVLIQQNCVQAFTTEQPDGFADGPKANT 83

Query: 1143 QYTVVFENILHRLRFSKFLVIVSKALGKECVELLEGLLQHGRLTLEQIILRAISNKNEGN 964
            QY V+F+NILHR+RF+KFL I+S+   ++CVEL++GLL+HGRLTL+Q+  RA S++ EGN
Sbjct: 84   QYVVLFDNILHRVRFAKFLTILSQEFDQQCVELVQGLLEHGRLTLKQMFDRAKSSEKEGN 143

Query: 963  SAFQDALRTSFVKLVNARYVERCPAAEPFLAPPSEDETPSAGKRGAKSAKLIEERVTVEQ 784
                D+LR + VKLV A YVERCPA+EP L P SE+E P A K+G+KSAK I E  T+EQ
Sbjct: 144  LVDLDSLRETLVKLVTAHYVERCPASEPLLMPISEEEGP-ARKKGSKSAKKIGEPETIEQ 202

Query: 783  RATTAATPLEAERFSITTDTGTDVTSEAKSGGDPPPTTVGEKRKHETLEMDSKVMATICE 604
            +   AA P+EA RFS+ T+  +DV  + K+  +  P   GEKRKH+ LE+D   +A   E
Sbjct: 203  QVVEAALPMEAMRFSVVTNVESDVGEKEKNSNNVTP---GEKRKHDVLELDECGVAD--E 257

Query: 603  KEVLWRANFEEFVRLLRIKACVTNVRSRLDDNAGIVLNAMLEATRRVEKKNKTEYSAPLS 424
            + V++RANFE F+R LR K C+ +VR+ LDD A  VL+AML+AT   EKK KT+ S PLS
Sbjct: 258  QSVVYRANFEGFIRRLRHKGCIDHVRAHLDDGAANVLSAMLQATSSAEKKVKTKNSVPLS 317

Query: 423  MDAILEEVMKSEEGRSMTVEHVRAALSQL 337
            + +I EEV+KSE GR+MT++HVRA+L QL
Sbjct: 318  LSSIYEEVIKSEAGRNMTLDHVRASLVQL 346



 Score = 67.0 bits (162), Expect(2) = e-106
 Identities = 32/41 (78%), Positives = 38/41 (92%)
 Frame = -2

Query: 302 IIEMAQNEEVESTVLKRYGRDAYRMFRLLSKAGRLVLTDQV 180
           IIE+AQNEEVES V KRYGRDAYR+FRLLSK+GRL+ TD++
Sbjct: 351 IIEIAQNEEVESVVSKRYGRDAYRIFRLLSKSGRLLETDKI 391


>gb|EXC19135.1| DNA-directed RNA polymerase III subunit RPC3 [Morus notabilis]
          Length = 564

 Score =  336 bits (862), Expect(2) = e-102
 Identities = 193/331 (58%), Positives = 227/331 (68%), Gaps = 1/331 (0%)
 Frame = -1

Query: 1320 VCECLLRKGTLTLTEISRYTEIPSQQVKNYLLVLIQHNCVQAFAIQQEGGFGVQPRVVTQ 1141
            VCE LLRKG LTL ++ R+TE+   Q+KN LL+LIQHNCVQ F+ +Q G  G + +V TQ
Sbjct: 25   VCENLLRKGPLTLQQLIRFTELTPLQIKNSLLILIQHNCVQPFSSEQIGAGGNEVKV-TQ 83

Query: 1140 YTVVFENILHRLRFSKFLVIVSKALGKECVELLEGLLQHGRLTLEQIILRAISNKNEGNS 961
            Y V+F+NILHRLRF KFL IVS+ L K C E+LEGLLQHGRLTLEQI  RA  N      
Sbjct: 84   YLVLFDNILHRLRFPKFLEIVSEELDKNCGEILEGLLQHGRLTLEQIYERARDN------ 137

Query: 960  AFQDALRTSFVKLVNARYVERCPAAEPFLAPPSEDETPSAGKRGAKSAKLIEERVTVEQR 781
            A QDA+R SF KL+N+R+VERCPA EPF+ P +     S+ KRGAKSAKL E   T EQR
Sbjct: 138  AVQDAVRESFQKLLNSRFVERCPAPEPFVEPST---IKSSNKRGAKSAKLDEVSETEEQR 194

Query: 780  ATTAATPLEAERFSITTDTGTDVTSEAKSGGDPPPTTVGEKRKHETLEMDSKVMATICEK 601
               AA  L+  RFSI T +GT+   + K G       VGEKRKH   + D    +   E 
Sbjct: 195  VLAAAASLDTLRFSILTPSGTEFDEDKKDGDSSSSMGVGEKRKHGAADSDDAFGSN--EN 252

Query: 600  EV-LWRANFEEFVRLLRIKACVTNVRSRLDDNAGIVLNAMLEATRRVEKKNKTEYSAPLS 424
            EV LWRANFEEF R LR KAC+ NVR+RLD  A  VL AML+ATR  EKK KTE S  LS
Sbjct: 253  EVILWRANFEEFTRYLRHKACIENVRARLDVGAATVLKAMLDATRSAEKKVKTENSVSLS 312

Query: 423  MDAILEEVMKSEEGRSMTVEHVRAALSQLGC 331
            MD I EEVMKSE GRS+T++ VRA+L QLGC
Sbjct: 313  MDTIFEEVMKSEAGRSLTLDRVRASLVQLGC 343



 Score = 65.9 bits (159), Expect(2) = e-102
 Identities = 35/46 (76%), Positives = 39/46 (84%), Gaps = 2/46 (4%)
 Frame = -2

Query: 302 IIEMAQNEEVESTVLKRYGRDAYRMFRLLSKAGRLVLTDQV--MTF 171
           IIE+AQ EEVES VL+RYGRDAYRMFRLLSKAG L  TD++  MTF
Sbjct: 359 IIELAQKEEVESIVLRRYGRDAYRMFRLLSKAGLLQETDKIADMTF 404


>ref|XP_004240730.1| PREDICTED: DNA-directed RNA polymerase III subunit rpc3-like [Solanum
            lycopersicum]
          Length = 525

 Score =  319 bits (818), Expect(2) = 9e-97
 Identities = 176/331 (53%), Positives = 232/331 (70%)
 Frame = -1

Query: 1323 KVCECLLRKGTLTLTEISRYTEIPSQQVKNYLLVLIQHNCVQAFAIQQEGGFGVQPRVVT 1144
            KVC+CLLR+GT TL ++   TE+  + VKN LLVLI HNCVQAFAI+Q GGFG + +++T
Sbjct: 24   KVCDCLLRRGTQTLHQVVSSTELSRKNVKNCLLVLIHHNCVQAFAIRQPGGFGEEAKIIT 83

Query: 1143 QYTVVFENILHRLRFSKFLVIVSKALGKECVELLEGLLQHGRLTLEQIILRAISNKNEGN 964
            QY  +F+NI+H+LRF KF+ IVS+ LGKEC E+LE LLQHGRL+L QII++      +G+
Sbjct: 84   QYMALFDNIIHKLRFPKFIEIVSEELGKECEEILEWLLQHGRLSLSQIIVKYKQASKQGD 143

Query: 963  SAFQDALRTSFVKLVNARYVERCPAAEPFLAPPSEDETPSAGKRGAKSAKLIEERVTVEQ 784
            S+  DA + SF +LVNAR+VERCPA +P L PP+E+ET +A KRGAKSAK+  +  T+EQ
Sbjct: 144  SS-ADAAQDSFNRLVNARFVERCPAPDPLLEPPAEEET-AAKKRGAKSAKI--QAQTMEQ 199

Query: 783  RATTAATPLEAERFSITTDTGTDVTSEAKSGGDPPPTTVGEKRKHETLEMDSKVMATICE 604
            +A  AA P+E+ RF +       V    K   D      G KRK E LE ++K  AT  E
Sbjct: 200  QALAAAAPMESMRFLVENIWNDSVEKADKRTTD---VKCGMKRKQEDLESNTKDPAT-GE 255

Query: 603  KEVLWRANFEEFVRLLRIKACVTNVRSRLDDNAGIVLNAMLEATRRVEKKNKTEYSAPLS 424
            KEVLWRANFEEF+R LR KACV NV+ R++++A IVL A LE +R  E K + + S P S
Sbjct: 256  KEVLWRANFEEFIRRLRHKACVANVKVRVNNDAAIVLAATLELSRHSETKLRIDNSVPQS 315

Query: 423  MDAILEEVMKSEEGRSMTVEHVRAALSQLGC 331
            ++AI +EV+K E G  M +E +RA+L  LGC
Sbjct: 316  INAIYDEVIKREGGLGMDLERIRASLDDLGC 346



 Score = 63.2 bits (152), Expect(2) = 9e-97
 Identities = 32/41 (78%), Positives = 36/41 (87%)
 Frame = -2

Query: 302 IIEMAQNEEVESTVLKRYGRDAYRMFRLLSKAGRLVLTDQV 180
           IIE A+ EEVES VLKRYGR+AYRMFRLLSKA RLV TD++
Sbjct: 364 IIEQARIEEVESIVLKRYGREAYRMFRLLSKADRLVETDKI 404


>ref|XP_006363319.1| PREDICTED: DNA-directed RNA polymerase III subunit rpc3-like [Solanum
            tuberosum]
          Length = 525

 Score =  319 bits (817), Expect(2) = 1e-96
 Identities = 176/333 (52%), Positives = 233/333 (69%), Gaps = 2/333 (0%)
 Frame = -1

Query: 1323 KVCECLLRKGTLTLTEISRYTEIPSQQVKNYLLVLIQHNCVQAFAIQQEGGFGVQPRVVT 1144
            KVC+CLLR+GT TL ++   TE+    VKN LLVLI HNCVQAFA+QQ GGFG +P+V+T
Sbjct: 24   KVCDCLLRRGTQTLYQVVSSTELTRTNVKNCLLVLIHHNCVQAFALQQPGGFGEEPKVIT 83

Query: 1143 QYTVVFENILHRLRFSKFLVIVSKALGKECVELLEGLLQHGRLTLEQIILRAISNKNEGN 964
            QY  +F+NI+H+LRF KF+ IVS+ +GKEC E+ EGLLQHGRLTL +II R      +G+
Sbjct: 84   QYMALFDNIIHKLRFPKFIEIVSEEMGKECEEIFEGLLQHGRLTLTEIIERYKEASKQGD 143

Query: 963  SAFQDALRTSFVKLVNARYVERCPAAEPFLAPPSEDETPSAGKRGAKSAKLIEERVTVEQ 784
            S+  DA R SF  LVNAR+VERCPA +P L PP+ +ET +A KRGAKSAK+  +  T+EQ
Sbjct: 144  SS-ADAARDSFNSLVNARFVERCPAPDPLLEPPAAEET-AAKKRGAKSAKI--QAQTMEQ 199

Query: 783  RATTAATPLEAERFSITTDTGTDVTSEAKSGGDPPPTTV--GEKRKHETLEMDSKVMATI 610
            +A  AA P+E+ RF +      D+ +++    D   T V  G KRK   LE ++K  AT 
Sbjct: 200  QALAAAAPMESMRFLV-----EDIWNDSVERADKRTTDVKCGMKRKQGDLESNTKDSAT- 253

Query: 609  CEKEVLWRANFEEFVRLLRIKACVTNVRSRLDDNAGIVLNAMLEATRRVEKKNKTEYSAP 430
             +KEVLWRANFEEF+R LR KACV NV+ R++++A +VL A LE +R  E K + + S P
Sbjct: 254  GKKEVLWRANFEEFIRRLRHKACVANVKVRVNNDAAVVLAATLELSRHSETKLRIDNSVP 313

Query: 429  LSMDAILEEVMKSEEGRSMTVEHVRAALSQLGC 331
             S++AI +EV+K E G  M +E +RA+L  LGC
Sbjct: 314  QSINAIYDEVIKREGGLGMDLERIRASLDDLGC 346



 Score = 63.2 bits (152), Expect(2) = 1e-96
 Identities = 32/41 (78%), Positives = 36/41 (87%)
 Frame = -2

Query: 302 IIEMAQNEEVESTVLKRYGRDAYRMFRLLSKAGRLVLTDQV 180
           IIE A+ EEVES VLKRYGR+AYRMFRLLSKA RLV TD++
Sbjct: 364 IIEQARIEEVESIVLKRYGREAYRMFRLLSKADRLVETDKI 404


>ref|XP_002510780.1| DNA-directed RNA polymerase III 62 kDa polypeptide, putative [Ricinus
            communis] gi|223549895|gb|EEF51382.1| DNA-directed RNA
            polymerase III 62 kDa polypeptide, putative [Ricinus
            communis]
          Length = 485

 Score =  308 bits (790), Expect(2) = 7e-94
 Identities = 168/333 (50%), Positives = 225/333 (67%)
 Frame = -1

Query: 1323 KVCECLLRKGTLTLTEISRYTEIPSQQVKNYLLVLIQHNCVQAFAIQQEGGFGVQPRVVT 1144
            KVC+CLLRKG LT+ ++  +TE+   QVKN LLVLIQHNCVQA+        G   ++ T
Sbjct: 25   KVCQCLLRKGPLTVQKVVEFTELNQTQVKNSLLVLIQHNCVQAYRS------GDDLKLTT 78

Query: 1143 QYTVVFENILHRLRFSKFLVIVSKALGKECVELLEGLLQHGRLTLEQIILRAISNKNEGN 964
             Y  +F+NILHR+RFSKFL I+S+   K CV+++EGLL+HGRLT++QI+ RA    N  N
Sbjct: 79   HYIALFDNILHRVRFSKFLAIISQDFHKSCVDIVEGLLEHGRLTVKQIVDRA----NSRN 134

Query: 963  SAFQDALRTSFVKLVNARYVERCPAAEPFLAPPSEDETPSAGKRGAKSAKLIEERVTVEQ 784
            S   D+++ +  KLVN RY+E CPA+EP LAPP+E+E   A KR AKSAK++ E  T+EQ
Sbjct: 135  SIGLDSVKENLCKLVNGRYIEHCPASEPVLAPPTEEED-RAKKRSAKSAKIVIESETLEQ 193

Query: 783  RATTAATPLEAERFSITTDTGTDVTSEAKSGGDPPPTTVGEKRKHETLEMDSKVMATICE 604
            R    A P++A+RFS+  DT      E K   +       ++ K     +  KV     +
Sbjct: 194  RVLAVAVPMDAKRFSVDLDT------ELKDDAE------NDQNKSSDKHVGDKVAE---D 238

Query: 603  KEVLWRANFEEFVRLLRIKACVTNVRSRLDDNAGIVLNAMLEATRRVEKKNKTEYSAPLS 424
            + VLWRANFEEF+R LR KAC+ NVR RLDD A IVL+AML+A+R  EKK KT  S PLS
Sbjct: 239  QVVLWRANFEEFIRRLRHKACIENVRGRLDDGAAIVLSAMLDASRTEEKKVKTASSVPLS 298

Query: 423  MDAILEEVMKSEEGRSMTVEHVRAALSQLGCHP 325
            +++I EEV+K+E GR+MT++H+ +AL QLG  P
Sbjct: 299  LNSIYEEVIKNENGRNMTIDHIESALGQLGSPP 331



 Score = 64.3 bits (155), Expect(2) = 7e-94
 Identities = 33/47 (70%), Positives = 40/47 (85%), Gaps = 1/47 (2%)
 Frame = -2

Query: 302 IIEMAQNEEVESTVLKRYGRDAYRMFRLLSKAGRLVLTDQVM-TFFI 165
           IIE AQ++EVES VLKRYGRDAYR+FRLLSKA RL+ TD++  T F+
Sbjct: 348 IIEAAQSDEVESIVLKRYGRDAYRIFRLLSKASRLLETDKISDTIFV 394


>ref|XP_006374620.1| hypothetical protein POPTR_0015s13040g [Populus trichocarpa]
            gi|550322613|gb|ERP52417.1| hypothetical protein
            POPTR_0015s13040g [Populus trichocarpa]
          Length = 437

 Score =  299 bits (766), Expect(2) = 6e-90
 Identities = 165/334 (49%), Positives = 222/334 (66%), Gaps = 1/334 (0%)
 Frame = -1

Query: 1323 KVCECLLRKGTLTLTEISRYTEIPSQQVKNYLLVLIQHNCVQAFAIQQEGGFGVQPRVVT 1144
            KVC+CLL+KG L L EI RYTE+    V+N LLVLIQHNC+Q F +++EGGFG   +V +
Sbjct: 24   KVCDCLLKKGPLPLREIVRYTELSETLVRNCLLVLIQHNCLQPFLLEEEGGFGEVNKVSS 83

Query: 1143 QYTVVFENILHRLRFSKFLVIVSKALGKECVELLEGLLQHGRLTLEQIILRAISNKNEGN 964
             Y V+F+N+LHR+RFSKF+ IVS+   K CV+L+E LLQHGRL+ EQI       ++  +
Sbjct: 84   LYMVLFDNVLHRVRFSKFMAIVSQEFDKLCVDLIETLLQHGRLSSEQIF---DGFRDRSS 140

Query: 963  SAFQDALRTSFVKLVNARYVERCPAAEPFLAPPSEDETPSAGKRGAKSAKLIEERVTVEQ 784
            S   +AL+ +  KLV ARYVERCP +EPFLA PSE+E     +RGAKSAK   E  T+EQ
Sbjct: 141  SGGMEALQENMHKLVMARYVERCPISEPFLALPSEEEAAPVRRRGAKSAKAFLEPETLEQ 200

Query: 783  RATTAATPLEAERFSITTDTGTDVTSEAKSGGDPPPTTVGEKRKHETLEMDSKVMATICE 604
            R   AA P E  RFS   +   ++ ++     +   + +G+KRK + LE D  +   + +
Sbjct: 201  RVLVAAVPPEGMRFSF--ELNPEIGADRDKVENNSSSNIGDKRKLDALESD--IDGGVAD 256

Query: 603  KEV-LWRANFEEFVRLLRIKACVTNVRSRLDDNAGIVLNAMLEATRRVEKKNKTEYSAPL 427
            K+V LWR NFEEF+R LR K C+  VR+RLDD A  V  AML+A+R  EKK KT  S PL
Sbjct: 257  KQVALWRVNFEEFIRRLRHKICIETVRTRLDDEAATVFTAMLDASRSEEKKIKTASSVPL 316

Query: 426  SMDAILEEVMKSEEGRSMTVEHVRAALSQLGCHP 325
            S ++I  EV+KSE+GR+MT+++V + L  L   P
Sbjct: 317  SENSIYAEVIKSEKGRNMTLDYVISVLVGLSSSP 350



 Score = 60.5 bits (145), Expect(2) = 6e-90
 Identities = 29/42 (69%), Positives = 37/42 (88%)
 Frame = -2

Query: 299 IEMAQNEEVESTVLKRYGRDAYRMFRLLSKAGRLVLTDQVMT 174
           IE+AQ +EVES V K+YG+DAYRMFRLLSKAG L+ TD+V++
Sbjct: 368 IEVAQTDEVESIVYKKYGKDAYRMFRLLSKAGCLLETDKVIS 409


>ref|XP_007219003.1| hypothetical protein PRUPE_ppa004195mg [Prunus persica]
            gi|462415465|gb|EMJ20202.1| hypothetical protein
            PRUPE_ppa004195mg [Prunus persica]
          Length = 524

 Score =  298 bits (764), Expect(2) = 1e-88
 Identities = 174/332 (52%), Positives = 228/332 (68%), Gaps = 3/332 (0%)
 Frame = -1

Query: 1323 KVCECLLRKGTLTLTEISRYTEIPSQQVKNYLLVLIQHNCVQAFAIQQEGGFGVQPRVVT 1144
            KVCE LLR+G L+L ++  +TE+  QQVKN LL+LIQHNCVQ F+  Q  G    P+V T
Sbjct: 25   KVCEILLRRGHLSLKQLIGFTELTPQQVKNSLLILIQHNCVQPFSFDQSEG----PKV-T 79

Query: 1143 QYTVVFENILHRLRFSKFLVIVSKALGKECVELLEGLLQHGRLTLEQIILRAISNKNEGN 964
            QY  +F+NI+HR RF+KFL +VS+ L  +   +L+ LL++GRLTL+QII  A S+K++G+
Sbjct: 80   QYIALFDNIIHRGRFAKFLAVVSQELDTDRELILKDLLENGRLTLKQIIEGAESSKSQGD 139

Query: 963  SAFQDALRTSFVKLVNARYVERCPAAEPFLAPPSEDETPSAGKRGAKSAKLIEERVTVEQ 784
            SA +D+++ SF+KLVNA +VERCPA EP L   ++ E P A KRGAKSAK++E   T+EQ
Sbjct: 140  SADKDSVQESFLKLVNAHFVERCPAPEPVLGQATKQEGP-AKKRGAKSAKMVEVPETIEQ 198

Query: 783  RATTAATPLEAERFSITTDTGTDVTSEAKSGGDPPPTTVGEKRKHETLEMDSKVMATICE 604
            R   AA P EA RFSI  D+  D       GG     +VGEK       +   ++ +I +
Sbjct: 199  RVIAAAAPPEAIRFSIMIDSEADAP-----GGKSDNMSVGEK-------VGIGIVISIYQ 246

Query: 603  ---KEVLWRANFEEFVRLLRIKACVTNVRSRLDDNAGIVLNAMLEATRRVEKKNKTEYSA 433
               + VLWRANFEEF+R LR KACV NVR+RLDD A +VL AML+ATR  EKK KTE S 
Sbjct: 247  GYDEVVLWRANFEEFIRCLRHKACVENVRARLDDEAAVVLRAMLKATRTAEKKVKTENSV 306

Query: 432  PLSMDAILEEVMKSEEGRSMTVEHVRAALSQL 337
            PLS++ I EEV+ SE GRS+T+  VR +LS L
Sbjct: 307  PLSLNTIYEEVINSEAGRSLTMGRVRDSLSGL 338



 Score = 57.0 bits (136), Expect(2) = 1e-88
 Identities = 26/41 (63%), Positives = 35/41 (85%)
 Frame = -2

Query: 302 IIEMAQNEEVESTVLKRYGRDAYRMFRLLSKAGRLVLTDQV 180
           I+E+AQ++EVE  VLKRYG+DAY MFR+LS AGR + TD++
Sbjct: 360 ILELAQDDEVELIVLKRYGKDAYTMFRILSLAGRPIETDKI 400


>emb|CAN75989.1| hypothetical protein VITISV_012194 [Vitis vinifera]
          Length = 549

 Score =  329 bits (844), Expect = 1e-87
 Identities = 184/345 (53%), Positives = 230/345 (66%), Gaps = 8/345 (2%)
 Frame = -1

Query: 1323 KVCECLLRKGTLTLTEISRYTEIPSQQVKNYLLVLIQHNCVQAFAIQQEGGFGVQPRVVT 1144
            KVC+CL+RKGTL L +I R T++  QQVK YL VLIQHNCVQAFA++ EGG G  P VVT
Sbjct: 24   KVCDCLIRKGTLALDDIVRTTKLSPQQVKTYLKVLIQHNCVQAFAMEHEGGCGEGPVVVT 83

Query: 1143 QYTVVFENILHRLRFSKFLVIVSKALGKECVELLEGLLQHGRLTLEQIILRAISNKNEGN 964
            QY ++F+NILHR+RF K L IVSK L KEC +L E  L+HG LTL+QI+ R  SN+NEGN
Sbjct: 84   QYMLLFDNILHRMRFPKLLAIVSKELDKECEKLFEAFLKHGWLTLQQILDRVPSNQNEGN 143

Query: 963  SAFQDALRTSFVKLVNARYVERCPAAEPFLAPPSEDETPSAGKRGAKSAK-------LIE 805
               QDALR SF KLVNA YVERCPA +PFL PP E++TP A K  A SAK        +E
Sbjct: 144  CTVQDALRGSFTKLVNAHYVERCPAPDPFLVPPDEEKTP-ARKHDANSAKALTDSCQAVE 202

Query: 804  ERVTVEQRATTAATPLEAERFSITTDTGTDVTSEAKSGGDPPPTTVGEK-RKHETLEMDS 628
            E    EQ     ATP +A+ F + TDT  D+  + KS G+PP   + +K  +    ++  
Sbjct: 203  ELEIGEQCDIAKATPSKAKGFPVITDTCGDINGD-KSIGNPPGVVIXKKVAQARCFKIGI 261

Query: 627  KVMATICEKEVLWRANFEEFVRLLRIKACVTNVRSRLDDNAGIVLNAMLEATRRVEKKNK 448
            + +    EK+V WRAN++E        AC+ NVR+RLD  A IVL+AMLEAT+  EK  K
Sbjct: 262  QNLGLASEKDVPWRANYKEL-------ACIENVRARLDSGAAIVLSAMLEATQSAEKNVK 314

Query: 447  TEYSAPLSMDAILEEVMKSEEGRSMTVEHVRAALSQLGCHPNARG 313
             E S  LS++ I E VM+SE G SMT+E +RA+L QLGCHPN  G
Sbjct: 315  EEISVLLSINTITEAVMQSEAGCSMTLERIRASLVQLGCHPNGVG 359


>ref|XP_002321920.2| RNA polymerase 3 subunit RPC82 family protein [Populus trichocarpa]
            gi|550322612|gb|EEF06047.2| RNA polymerase 3 subunit
            RPC82 family protein [Populus trichocarpa]
          Length = 520

 Score =  299 bits (766), Expect(2) = 4e-87
 Identities = 165/334 (49%), Positives = 222/334 (66%), Gaps = 1/334 (0%)
 Frame = -1

Query: 1323 KVCECLLRKGTLTLTEISRYTEIPSQQVKNYLLVLIQHNCVQAFAIQQEGGFGVQPRVVT 1144
            KVC+CLL+KG L L EI RYTE+    V+N LLVLIQHNC+Q F +++EGGFG   +V +
Sbjct: 24   KVCDCLLKKGPLPLREIVRYTELSETLVRNCLLVLIQHNCLQPFLLEEEGGFGEVNKVSS 83

Query: 1143 QYTVVFENILHRLRFSKFLVIVSKALGKECVELLEGLLQHGRLTLEQIILRAISNKNEGN 964
             Y V+F+N+LHR+RFSKF+ IVS+   K CV+L+E LLQHGRL+ EQI       ++  +
Sbjct: 84   LYMVLFDNVLHRVRFSKFMAIVSQEFDKLCVDLIETLLQHGRLSSEQIF---DGFRDRSS 140

Query: 963  SAFQDALRTSFVKLVNARYVERCPAAEPFLAPPSEDETPSAGKRGAKSAKLIEERVTVEQ 784
            S   +AL+ +  KLV ARYVERCP +EPFLA PSE+E     +RGAKSAK   E  T+EQ
Sbjct: 141  SGGMEALQENMHKLVMARYVERCPISEPFLALPSEEEAAPVRRRGAKSAKAFLEPETLEQ 200

Query: 783  RATTAATPLEAERFSITTDTGTDVTSEAKSGGDPPPTTVGEKRKHETLEMDSKVMATICE 604
            R   AA P E  RFS   +   ++ ++     +   + +G+KRK + LE D  +   + +
Sbjct: 201  RVLVAAVPPEGMRFSF--ELNPEIGADRDKVENNSSSNIGDKRKLDALESD--IDGGVAD 256

Query: 603  KEV-LWRANFEEFVRLLRIKACVTNVRSRLDDNAGIVLNAMLEATRRVEKKNKTEYSAPL 427
            K+V LWR NFEEF+R LR K C+  VR+RLDD A  V  AML+A+R  EKK KT  S PL
Sbjct: 257  KQVALWRVNFEEFIRRLRHKICIETVRTRLDDEAATVFTAMLDASRSEEKKIKTASSVPL 316

Query: 426  SMDAILEEVMKSEEGRSMTVEHVRAALSQLGCHP 325
            S ++I  EV+KSE+GR+MT+++V + L  L   P
Sbjct: 317  SENSIYAEVIKSEKGRNMTLDYVISVLVGLSSSP 350



 Score = 50.8 bits (120), Expect(2) = 4e-87
 Identities = 26/40 (65%), Positives = 33/40 (82%)
 Frame = -2

Query: 299 IEMAQNEEVESTVLKRYGRDAYRMFRLLSKAGRLVLTDQV 180
           IE+AQ +E  S V K+YG+DAYRMFRLLSKAG L+ TD++
Sbjct: 368 IEVAQTDE--SIVYKKYGKDAYRMFRLLSKAGCLLETDKI 405


>ref|XP_004140835.1| PREDICTED: DNA-directed RNA polymerase III subunit RPC3-like [Cucumis
            sativus]
          Length = 518

 Score =  287 bits (735), Expect(2) = 1e-86
 Identities = 169/333 (50%), Positives = 216/333 (64%), Gaps = 2/333 (0%)
 Frame = -1

Query: 1323 KVCECLLRKGTLTLTEISRYTEIPSQQVKNYLLVLIQHNCVQAFAIQQEGGFGVQPRVVT 1144
            KVCE LLRKG LTL  + R+TE+   QV N LL+LIQHNCVQAF       FG  P+  T
Sbjct: 25   KVCETLLRKGPLTLRLLIRFTELTPSQVNNSLLILIQHNCVQAFT-----DFGDAPKDDT 79

Query: 1143 QYTVVFENILHRLRFSKFLVIVSKALG--KECVELLEGLLQHGRLTLEQIILRAISNKNE 970
             Y  +F NILHR+RFSKF+ I S+ LG  K C ELLEGLLQ+GRL++EQ++ RA S    
Sbjct: 80   LYLALFSNILHRMRFSKFVAIASQKLGQDKNCQELLEGLLQNGRLSMEQLVERAESR--- 136

Query: 969  GNSAFQDALRTSFVKLVNARYVERCPAAEPFLAPPSEDETPSAGKRGAKSAKLIEERVTV 790
             N    D +  S  KL+NA +VERCPA EP L+P  E+  P   KRGAK+AK+ E   T+
Sbjct: 137  -NHPISDVVHDSLFKLLNAHFVERCPAPEPTLSPKVEEPPPR--KRGAKAAKISEVPETL 193

Query: 789  EQRATTAATPLEAERFSITTDTGTDVTSEAKSGGDPPPTTVGEKRKHETLEMDSKVMATI 610
            EQR   AA P+E  RFS+      D   EA+        + G+KRKH+ LE+     +  
Sbjct: 194  EQRLIEAARPVEVLRFSMG-----DTNPEAEKSEHHSQIS-GQKRKHDDLEIAQD--SGD 245

Query: 609  CEKEVLWRANFEEFVRLLRIKACVTNVRSRLDDNAGIVLNAMLEATRRVEKKNKTEYSAP 430
             +  +LWRAN++EF+R LR KAC+ +VRS+ DD    VL+A+LEATR  EK  KTE + P
Sbjct: 246  ADGPILWRANYDEFIRCLRHKACIEHVRSQFDDGVVNVLSAILEATRSSEKIVKTEITVP 305

Query: 429  LSMDAILEEVMKSEEGRSMTVEHVRAALSQLGC 331
            LS+D I EEVMK+E GRSMT++ V A+L+ LGC
Sbjct: 306  LSLDNIYEEVMKNEVGRSMTLDRVEASLAALGC 338



 Score = 61.6 bits (148), Expect(2) = 1e-86
 Identities = 30/41 (73%), Positives = 34/41 (82%)
 Frame = -2

Query: 302 IIEMAQNEEVESTVLKRYGRDAYRMFRLLSKAGRLVLTDQV 180
           IIE AQ +EVES VLKRYGRDAYRMFR LSK G LV T+++
Sbjct: 357 IIEQAQTDEVESIVLKRYGRDAYRMFRFLSKTGGLVETEKI 397


>ref|XP_004168254.1| PREDICTED: DNA-directed RNA polymerase III subunit RPC3-like [Cucumis
            sativus]
          Length = 518

 Score =  284 bits (727), Expect(2) = 8e-86
 Identities = 168/333 (50%), Positives = 215/333 (64%), Gaps = 2/333 (0%)
 Frame = -1

Query: 1323 KVCECLLRKGTLTLTEISRYTEIPSQQVKNYLLVLIQHNCVQAFAIQQEGGFGVQPRVVT 1144
            KVCE LLRKG LTL  + R+TE+   QV N LL+LIQHNCVQAF       FG   +  T
Sbjct: 25   KVCETLLRKGPLTLRLLIRFTELTPSQVNNSLLILIQHNCVQAFT-----DFGDASKDDT 79

Query: 1143 QYTVVFENILHRLRFSKFLVIVSKALG--KECVELLEGLLQHGRLTLEQIILRAISNKNE 970
             Y  +F NILHR+RFSKF+ I S+ LG  K C ELLEGLLQ+GRL++EQ++ RA S    
Sbjct: 80   LYLALFSNILHRMRFSKFVAIASQKLGQDKNCQELLEGLLQNGRLSMEQLVERAESR--- 136

Query: 969  GNSAFQDALRTSFVKLVNARYVERCPAAEPFLAPPSEDETPSAGKRGAKSAKLIEERVTV 790
             N    D +  S  KL+NA +VERCPA EP L+P  E+  P   KRGAK+AK+ E   T+
Sbjct: 137  -NHPISDVVHDSLFKLLNAHFVERCPAPEPTLSPKVEEPPPR--KRGAKAAKISEVPETL 193

Query: 789  EQRATTAATPLEAERFSITTDTGTDVTSEAKSGGDPPPTTVGEKRKHETLEMDSKVMATI 610
            EQR   AA P+E  RFS+      D   EA+        + G+KRKH+ LE+     +  
Sbjct: 194  EQRLIEAARPVEVLRFSMG-----DTNPEAEKSEHHSQIS-GQKRKHDDLEIAQD--SGD 245

Query: 609  CEKEVLWRANFEEFVRLLRIKACVTNVRSRLDDNAGIVLNAMLEATRRVEKKNKTEYSAP 430
             +  +LWRAN++EF+R LR KAC+ +VRS+ DD    VL+A+LEATR  EK  KTE + P
Sbjct: 246  ADGPILWRANYDEFIRCLRHKACIEHVRSQFDDGVVNVLSAILEATRSSEKIVKTEITVP 305

Query: 429  LSMDAILEEVMKSEEGRSMTVEHVRAALSQLGC 331
            LS+D I EEVMK+E GRSMT++ V A+L+ LGC
Sbjct: 306  LSLDNIYEEVMKNEVGRSMTLDRVEASLAALGC 338



 Score = 61.6 bits (148), Expect(2) = 8e-86
 Identities = 30/41 (73%), Positives = 34/41 (82%)
 Frame = -2

Query: 302 IIEMAQNEEVESTVLKRYGRDAYRMFRLLSKAGRLVLTDQV 180
           IIE AQ +EVES VLKRYGRDAYRMFR LSK G LV T+++
Sbjct: 357 IIEQAQTDEVESIVLKRYGRDAYRMFRFLSKTGGLVETEKI 397


>ref|XP_004308082.1| PREDICTED: DNA-directed RNA polymerase III subunit RPC3-like
            [Fragaria vesca subsp. vesca]
          Length = 534

 Score =  287 bits (735), Expect(2) = 2e-85
 Identities = 167/339 (49%), Positives = 218/339 (64%), Gaps = 2/339 (0%)
 Frame = -1

Query: 1323 KVCECLLRKGTLTLTEISRYTEIPSQQVKNYLLVLIQHNCVQAFAIQQEGGFGVQPRVVT 1144
            KVCE LL+ G L L  + R T +  QQVKN LL+L+QHNCVQ F  + + G  VQ     
Sbjct: 25   KVCETLLKSGPLNLGALIRSTALTPQQVKNSLLILVQHNCVQPFTQESKAGLKVQ----- 79

Query: 1143 QYTVVFENILHRLRFSKFLVIVSKALGKECVELLEGLLQHGRLTLEQIILRAISNKNEGN 964
             Y  V++NILHRLRF+KFL +V++ LG EC +L+ GLL+HGRLT +Q++ RA       +
Sbjct: 80   -YIAVYDNILHRLRFAKFLAVVAQELGDECKQLVAGLLEHGRLTQQQLMDRADQKSKSDS 138

Query: 963  SAFQD--ALRTSFVKLVNARYVERCPAAEPFLAPPSEDETPSAGKRGAKSAKLIEERVTV 790
            +  QD  A + +FV+LVNAR+VERCPA EP L  P E E P   K   KSAK+++   T+
Sbjct: 139  TEVQDVSAAQENFVRLVNARFVERCPAPEPLLEEPPEQEGPK--KPRGKSAKMVQVPETI 196

Query: 789  EQRATTAATPLEAERFSITTDTGTDVTSEAKSGGDPPPTTVGEKRKHETLEMDSKVMATI 610
            EQR   AA P+EA RF ITT++ TD   + KS  +     VGEKRK +  ++DS+   + 
Sbjct: 197  EQRVLAAARPMEAIRFLITTESETDDPLQ-KSENNFSSMGVGEKRKFD--DLDSEEHGSN 253

Query: 609  CEKEVLWRANFEEFVRLLRIKACVTNVRSRLDDNAGIVLNAMLEATRRVEKKNKTEYSAP 430
             +  +LWRANFE+F+R LR KAC+ +VR+R DD A +VL A+L+ATR  E K KT+YS P
Sbjct: 254  DKGVILWRANFEQFIRCLRHKACIESVRARHDDGAAVVLRAVLKATRNQETKVKTDYSGP 313

Query: 429  LSMDAILEEVMKSEEGRSMTVEHVRAALSQLGCHPNARG 313
            L MDAI EEVM SE   S+  E VRA L  L   P   G
Sbjct: 314  LKMDAIYEEVMDSEACPSLEQECVRAHLRLLCGAPLVTG 352



 Score = 57.4 bits (137), Expect(2) = 2e-85
 Identities = 30/50 (60%), Positives = 37/50 (74%), Gaps = 3/50 (6%)
 Frame = -2

Query: 302 IIEMAQNEEVESTVLKRYGRDAYRMFRLL---SKAGRLVLTDQVMTFFIV 162
           IIE+ QN+EVES VLKRYG+DAYR+FRLL   S AGR   TD++    +V
Sbjct: 370 IIELLQNDEVESIVLKRYGKDAYRIFRLLTSQSNAGRFFETDKISEMALV 419


>ref|XP_007143425.1| hypothetical protein PHAVU_007G071300g [Phaseolus vulgaris]
            gi|561016615|gb|ESW15419.1| hypothetical protein
            PHAVU_007G071300g [Phaseolus vulgaris]
          Length = 517

 Score =  282 bits (722), Expect(2) = 7e-85
 Identities = 165/333 (49%), Positives = 217/333 (65%), Gaps = 2/333 (0%)
 Frame = -1

Query: 1323 KVCECLLRKGTLTLTEISRYTEIPSQQVKNYLLVLIQHNCVQAF--AIQQEGGFGVQPRV 1150
            KVCE L   G+LTL ++ RY+E+   QVKN LLVL+QHNC QAF  A + +     + RV
Sbjct: 24   KVCENLFSHGSLTLDQLVRYSELTKDQVKNSLLVLVQHNCCQAFISAPEDDDDDADRLRV 83

Query: 1149 VTQYTVVFENILHRLRFSKFLVIVSKALGKECVELLEGLLQHGRLTLEQIILRAISNKNE 970
             TQY V+F+NI+HRLRF KFL  VS+ L +ECVELL+GLL+ GRLTL+Q++ RA   K  
Sbjct: 84   RTQYLVLFDNIIHRLRFPKFLETVSRKLDEECVELLDGLLRDGRLTLKQMVDRASQGKE- 142

Query: 969  GNSAFQDALRTSFVKLVNARYVERCPAAEPFLAPPSEDETPSAGKRGAKSAKLIEERVTV 790
             N+     +R    KL+ AR VERCPA EP ++   ++ T    KRGAKSAK+ E   T+
Sbjct: 143  -NAVDTKVVREILSKLLTARLVERCPAPEPVVSTSFKETTTR--KRGAKSAKIFEAPETL 199

Query: 789  EQRATTAATPLEAERFSITTDTGTDVTSEAKSGGDPPPTTVGEKRKHETLEMDSKVMATI 610
            EQR   AA P  A RFS T D  ++V  E  S  D   T+V +         D+K     
Sbjct: 200  EQRVLEAAVPGNAIRFSFTADMRSNVDGETNSDDDQI-TSVEQN--------DAK----- 245

Query: 609  CEKEVLWRANFEEFVRLLRIKACVTNVRSRLDDNAGIVLNAMLEATRRVEKKNKTEYSAP 430
             E+E+LWRANFEEF+R +R KA + N+R++ DD    VL+A+LEAT+ VEKK K E S P
Sbjct: 246  -EEEILWRANFEEFIRHIRHKALIENIRTQHDDGTATVLSAVLEATKTVEKKVKMENSVP 304

Query: 429  LSMDAILEEVMKSEEGRSMTVEHVRAALSQLGC 331
            LS+D I  EVMK++ GR+MT++ +RA+LSQLGC
Sbjct: 305  LSLDTITAEVMKTDTGRTMTIDRIRASLSQLGC 337



 Score = 60.5 bits (145), Expect(2) = 7e-85
 Identities = 33/47 (70%), Positives = 35/47 (74%)
 Frame = -2

Query: 302 IIEMAQNEEVESTVLKRYGRDAYRMFRLLSKAGRLVLTDQVMTFFIV 162
           IIE AQNEEVES VLKRYGRDAYRMFRLLSK      TDQ+    +V
Sbjct: 354 IIERAQNEEVESIVLKRYGRDAYRMFRLLSKDCCFHDTDQIAASTLV 400