BLASTX nr result

ID: Akebia27_contig00006427 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Akebia27_contig00006427
         (613 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002275775.1| PREDICTED: zinc finger CCCH domain-containin...    89   8e-16
emb|CAN76191.1| hypothetical protein VITISV_020358 [Vitis vinifera]    89   8e-16
ref|XP_006447662.1| hypothetical protein CICLE_v10015215mg [Citr...    67   5e-09
ref|XP_007049198.1| Zinc finger C-x8-C-x5-C-x3-H type family pro...    64   3e-08
ref|XP_007049197.1| Zinc finger C-x8-C-x5-C-x3-H type family pro...    64   3e-08
ref|XP_002528968.1| zinc finger protein, putative [Ricinus commu...    59   8e-07
ref|XP_002320490.1| ZINC FINGER protein 2 [Populus trichocarpa] ...    59   8e-07
ref|XP_003633700.1| PREDICTED: LOW QUALITY PROTEIN: zinc finger ...    58   2e-06
gb|EXC25517.1| Zinc finger CCCH domain-containing protein 3 [Mor...    57   4e-06
ref|XP_002302855.1| ZINC FINGER protein 2 [Populus trichocarpa] ...    56   7e-06

>ref|XP_002275775.1| PREDICTED: zinc finger CCCH domain-containing protein 12 [Vitis
           vinifera] gi|297739220|emb|CBI28871.3| unnamed protein
           product [Vitis vinifera]
          Length = 450

 Score = 89.4 bits (220), Expect = 8e-16
 Identities = 44/92 (47%), Positives = 55/92 (59%), Gaps = 2/92 (2%)
 Frame = -3

Query: 611 ICTFYSLYGICKLGSSCQFDHPLAGF--YNYGMSMPALSIPEPHQFPYQRNSPMTHXXXX 438
           +C+ Y+LYG+CK G +C+FDHPL G+  YNY +S+P LSI +P   PYQRNS   H    
Sbjct: 335 VCSHYNLYGLCKYGPTCKFDHPLTGYSSYNYCLSLPPLSILDPSLLPYQRNSSTVHSSET 394

Query: 437 XXXXXSKLHDQNGKSEPKITKPQNPDVKVING 342
                SK  D   K+E   TK QNPD K   G
Sbjct: 395 SPSKSSKFPDWVQKTESGSTKSQNPDTKAPEG 426


>emb|CAN76191.1| hypothetical protein VITISV_020358 [Vitis vinifera]
          Length = 460

 Score = 89.4 bits (220), Expect = 8e-16
 Identities = 44/92 (47%), Positives = 55/92 (59%), Gaps = 2/92 (2%)
 Frame = -3

Query: 611 ICTFYSLYGICKLGSSCQFDHPLAGF--YNYGMSMPALSIPEPHQFPYQRNSPMTHXXXX 438
           +C+ Y+LYG+CK G +C+FDHPL G+  YNY +S+P LSI +P   PYQRNS   H    
Sbjct: 345 VCSHYNLYGLCKYGPTCKFDHPLTGYSSYNYCLSLPPLSILDPSLLPYQRNSSTVHSSET 404

Query: 437 XXXXXSKLHDQNGKSEPKITKPQNPDVKVING 342
                SK  D   K+E   TK QNPD K   G
Sbjct: 405 SPSKSSKFPDWVQKTESGSTKSQNPDTKAPEG 436


>ref|XP_006447662.1| hypothetical protein CICLE_v10015215mg [Citrus clementina]
           gi|568830635|ref|XP_006469597.1| PREDICTED: zinc finger
           CCCH domain-containing protein 3-like [Citrus sinensis]
           gi|557550273|gb|ESR60902.1| hypothetical protein
           CICLE_v10015215mg [Citrus clementina]
          Length = 451

 Score = 66.6 bits (161), Expect = 5e-09
 Identities = 37/87 (42%), Positives = 51/87 (58%), Gaps = 1/87 (1%)
 Frame = -3

Query: 611 ICTFYSLYGICKLGSSCQFDHPLAGF-YNYGMSMPALSIPEPHQFPYQRNSPMTHXXXXX 435
           IC+ YS+YGICK G +C+FDHP AG+  NYG+S+P LSI +     +Q  S  TH     
Sbjct: 334 ICSNYSMYGICKFGPTCRFDHPYAGYPINYGLSLPPLSILDSSLMNHQAIS-ATHSIETS 392

Query: 434 XXXXSKLHDQNGKSEPKITKPQNPDVK 354
               SK+ +    S+    + QNPD+K
Sbjct: 393 PDASSKIPNWVQNSDAVSVQHQNPDMK 419


>ref|XP_007049198.1| Zinc finger C-x8-C-x5-C-x3-H type family protein isoform 2
           [Theobroma cacao] gi|508701459|gb|EOX93355.1| Zinc
           finger C-x8-C-x5-C-x3-H type family protein isoform 2
           [Theobroma cacao]
          Length = 338

 Score = 63.9 bits (154), Expect = 3e-08
 Identities = 35/87 (40%), Positives = 50/87 (57%), Gaps = 1/87 (1%)
 Frame = -3

Query: 611 ICTFYSLYGICKLGSSCQFDHPLAGF-YNYGMSMPALSIPEPHQFPYQRNSPMTHXXXXX 435
           +C+ Y++YG+CK G +C+FDHP  G+ YNYG+S+P LS+ +     YQR SP  H     
Sbjct: 230 VCSSYTMYGLCKYGPTCRFDHPYVGYPYNYGLSLP-LSVFDTSLLTYQRISPTAH--TSE 286

Query: 434 XXXXSKLHDQNGKSEPKITKPQNPDVK 354
               SKL D    ++    K QN + K
Sbjct: 287 APLSSKLPDWARNTDSVSKKHQNLETK 313


>ref|XP_007049197.1| Zinc finger C-x8-C-x5-C-x3-H type family protein isoform 1
           [Theobroma cacao] gi|508701458|gb|EOX93354.1| Zinc
           finger C-x8-C-x5-C-x3-H type family protein isoform 1
           [Theobroma cacao]
          Length = 438

 Score = 63.9 bits (154), Expect = 3e-08
 Identities = 35/87 (40%), Positives = 50/87 (57%), Gaps = 1/87 (1%)
 Frame = -3

Query: 611 ICTFYSLYGICKLGSSCQFDHPLAGF-YNYGMSMPALSIPEPHQFPYQRNSPMTHXXXXX 435
           +C+ Y++YG+CK G +C+FDHP  G+ YNYG+S+P LS+ +     YQR SP  H     
Sbjct: 330 VCSSYTMYGLCKYGPTCRFDHPYVGYPYNYGLSLP-LSVFDTSLLTYQRISPTAH--TSE 386

Query: 434 XXXXSKLHDQNGKSEPKITKPQNPDVK 354
               SKL D    ++    K QN + K
Sbjct: 387 APLSSKLPDWARNTDSVSKKHQNLETK 413


>ref|XP_002528968.1| zinc finger protein, putative [Ricinus communis]
           gi|223531614|gb|EEF33442.1| zinc finger protein,
           putative [Ricinus communis]
          Length = 456

 Score = 59.3 bits (142), Expect = 8e-07
 Identities = 32/85 (37%), Positives = 43/85 (50%), Gaps = 1/85 (1%)
 Frame = -3

Query: 611 ICTFYSLYGICKLGSSCQFDHPLAGF-YNYGMSMPALSIPEPHQFPYQRNSPMTHXXXXX 435
           IC+ YS+YG+CK G +C+FDHP  G+ Y Y +S+  LSI +     Y R SP        
Sbjct: 342 ICSNYSMYGLCKFGPTCRFDHPFTGYPYGYSLSLQPLSIIDSSLLSYPRMSPPALSSESP 401

Query: 434 XXXXSKLHDQNGKSEPKITKPQNPD 360
               SK  D     +   +K QN D
Sbjct: 402 ISLSSKFPDWVQNPDGASSKHQNSD 426


>ref|XP_002320490.1| ZINC FINGER protein 2 [Populus trichocarpa]
           gi|222861263|gb|EEE98805.1| ZINC FINGER protein 2
           [Populus trichocarpa]
          Length = 446

 Score = 59.3 bits (142), Expect = 8e-07
 Identities = 34/96 (35%), Positives = 51/96 (53%), Gaps = 4/96 (4%)
 Frame = -3

Query: 611 ICTFYSLYGICKLGSSCQFDHPLAGF-YNYGMSMPALSIPEPHQFPYQR---NSPMTHXX 444
           +C  YS+YGICK G +C++DHP+  + YNY +S+P+LSI +     Y R    +P+T   
Sbjct: 337 VCPDYSMYGICKFGPTCRYDHPIHTYPYNYSLSLPSLSIMDSSLITYPRMAQAAPVT--- 393

Query: 443 XXXXXXXSKLHDQNGKSEPKITKPQNPDVKVINGND 336
                    +H+ +G S     K QNPD      +D
Sbjct: 394 --LSKLPDLIHNPDGAS---YNKHQNPDTSTKISDD 424


>ref|XP_003633700.1| PREDICTED: LOW QUALITY PROTEIN: zinc finger CCCH domain-containing
           protein 3-like [Vitis vinifera]
          Length = 324

 Score = 57.8 bits (138), Expect = 2e-06
 Identities = 25/52 (48%), Positives = 36/52 (69%), Gaps = 2/52 (3%)
 Frame = -3

Query: 611 ICTFYSLYGICKLGSSCQFDHPLAGF--YNYGMSMPALSIPEPHQFPYQRNS 462
           +C  Y+LYG+ + G +C+FDHPL G+  YNY +S+P LSI EP   P+  +S
Sbjct: 273 VCFHYNLYGLYRYGPTCKFDHPLTGYSSYNYCLSLPPLSILEPSLLPFFSSS 324


>gb|EXC25517.1| Zinc finger CCCH domain-containing protein 3 [Morus notabilis]
          Length = 439

 Score = 57.0 bits (136), Expect = 4e-06
 Identities = 21/37 (56%), Positives = 31/37 (83%), Gaps = 1/37 (2%)
 Frame = -3

Query: 611 ICTFYSLYGICKLGSSCQFDHPLAGF-YNYGMSMPAL 504
           +C++YS+YGICK G +C+FDHP   + YNYG+S+PA+
Sbjct: 330 VCSYYSMYGICKYGPTCKFDHPPLSYPYNYGLSLPAM 366


>ref|XP_002302855.1| ZINC FINGER protein 2 [Populus trichocarpa]
           gi|222844581|gb|EEE82128.1| ZINC FINGER protein 2
           [Populus trichocarpa]
          Length = 450

 Score = 56.2 bits (134), Expect = 7e-06
 Identities = 23/49 (46%), Positives = 34/49 (69%), Gaps = 1/49 (2%)
 Frame = -3

Query: 611 ICTFYSLYGICKLGSSCQFDHPLAGF-YNYGMSMPALSIPEPHQFPYQR 468
           +C  YS+YGICK G +C++DHPL  + YNY +S+P+LS+ +     Y R
Sbjct: 336 VCPDYSMYGICKFGPTCRYDHPLPTYPYNYSLSLPSLSMMDSSLVTYPR 384


Top