BLASTX nr result
ID: Akebia27_contig00006355
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Akebia27_contig00006355 (3800 letters) Database: ./nr 38,876,450 sequences; 13,856,398,315 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_002282072.2| PREDICTED: uncharacterized protein LOC100268... 556 e-155 ref|XP_007044902.1| RNA-binding family protein isoform 1 [Theobr... 539 e-150 ref|XP_007225677.1| hypothetical protein PRUPE_ppa002814mg [Prun... 524 e-145 ref|XP_007044904.1| RNA-binding family protein isoform 1 [Theobr... 524 e-145 ref|XP_006438179.1| hypothetical protein CICLE_v10030915mg [Citr... 515 e-143 ref|XP_006483997.1| PREDICTED: cleavage and polyadenylation spec... 511 e-142 ref|XP_007044908.1| RNA-binding family protein isoform 5, partia... 505 e-140 ref|XP_006483998.1| PREDICTED: cleavage and polyadenylation spec... 499 e-138 ref|XP_006438180.1| hypothetical protein CICLE_v10030917mg [Citr... 498 e-138 ref|XP_006341786.1| PREDICTED: cleavage and polyadenylation spec... 495 e-137 ref|XP_007044909.1| RNA-binding family protein isoform 6 [Theobr... 495 e-137 ref|XP_007044907.1| RNA-binding family protein isoform 4 [Theobr... 495 e-137 ref|XP_004310003.1| PREDICTED: uncharacterized protein LOC101309... 479 e-132 gb|EXB82464.1| Cleavage and polyadenylation specificity factor s... 475 e-131 ref|XP_002515040.1| RNA binding protein, putative [Ricinus commu... 472 e-130 ref|XP_002312652.1| RNA recognition motif-containing family prot... 440 e-120 ref|XP_007016781.1| 3'-5'-exoribonuclease family protein isoform... 381 e-102 ref|XP_002285257.1| PREDICTED: exosome complex component MTR3 [V... 375 e-101 gb|EXB38678.1| Exosome complex component [Morus notabilis] 369 8e-99 ref|XP_006424544.1| hypothetical protein CICLE_v10029091mg [Citr... 367 3e-98 >ref|XP_002282072.2| PREDICTED: uncharacterized protein LOC100268141 isoform 1 [Vitis vinifera] gi|359473133|ref|XP_003631251.1| PREDICTED: uncharacterized protein LOC100268141 isoform 2 [Vitis vinifera] Length = 647 Score = 556 bits (1434), Expect = e-155 Identities = 328/654 (50%), Positives = 376/654 (57%), Gaps = 32/654 (4%) Frame = -1 Query: 2000 MAEEQLDYGDEEYG-TQKMQYQSGGAISALADEDLMGEDDEYDDLYNDVNIGEGFLQLQR 1824 MAEEQLDY DEEYG QKM +Q GGAISALAD++LMGEDDEYDDLYNDVN+GEGFLQ+ R Sbjct: 1 MAEEQLDYEDEEYGGAQKMPFQGGGAISALADDELMGEDDEYDDLYNDVNVGEGFLQMHR 60 Query: 1823 SEPVSLGGVESGG-VQTQETDGPGSKAPEHGASQDVNIPGVV-----------ERNDSNI 1680 SE + GV +GG Q +TD P K E G SQ + IPGV E+ + + Sbjct: 61 SEAPAPSGVMAGGPFQAHKTDVPPQKL-EAGTSQGLIIPGVSIEGKYSNPHFHEKKEGPM 119 Query: 1679 RATVPDQAKGGF--------KGSVLEMAREIQVETTGFRDSAPMPPKIGVDPNQISGKFV 1524 P+ KG VLEM + QV GF+ S P+P K G +P+ + GK Sbjct: 120 AVKGPEMGSTSHLDGPSVSQKGRVLEMTHDTQVRNLGFQGSTPIPQKTGAEPSDVHGKIA 179 Query: 1523 SGSSPLSDAGTGAPRVATQIPINRPGLNIN--RPMVNENMSRPVVENGATMLFVGELHWW 1350 + S+P+ ++GTG PR Q+ N+ G+N+N RPMVNEN RP V+NGATMLFVGELHWW Sbjct: 180 NESTPVLNSGTGGPRAVPQMLSNQMGMNVNVNRPMVNENQIRPAVDNGATMLFVGELHWW 239 Query: 1349 TTDAELESVLSQYGRVKEIKFFDERASGKSKGYCQVEFFDAVAAASCKEGMNGYVFNGRA 1170 TTDAELESVLSQYGRVKEIKFFDERASGKSKGYCQVEF+DA AAA+CKEGMNGY+FNGRA Sbjct: 240 TTDAELESVLSQYGRVKEIKFFDERASGKSKGYCQVEFYDASAAAACKEGMNGYIFNGRA 299 Query: 1169 CVVAFASPQTLKQMGAAYQNKTQVQAQSQPQGRRPMNDGIGRGGGMNY-------XXXXX 1011 CVVAFASPQTLKQMGA+Y NKT QAQSQ QGRRPMNDG+GRGGGMN Sbjct: 300 CVVAFASPQTLKQMGASYMNKT--QAQSQSQGRRPMNDGVGRGGGMNMQGGDAGRNYGRG 357 Query: 1010 XXXXXXXXXXXXXXXXXXXXXXXXXXXGAKSMIXXXXXXXXXXXXGIPYGQXXXXXXXXX 831 GAK+M+ YGQ Sbjct: 358 GWGRGGQGILNRGPGGGGPMRGRGGAVGAKNMVGNTAGVGASGGG---YGQGLAGPTFGG 414 Query: 830 XXXGMMHPQSMMGAGFDXXXXXXXXXXXXXXXXXXXXXXPSFPTMNTVGLPGVAPHVNPA 651 G+MHPQ MMG+GFD PSFP +NT+GL GVAPHVNPA Sbjct: 415 PAGGLMHPQGMMGSGFDPTYMGRGGAYGGFSGSAFPGMVPSFPAVNTMGLAGVAPHVNPA 474 Query: 650 FFXXXXXXXXXXXXXXXXXXGHHAGMWTDTSVGGGWGGDEHG-RTKEXXXXXXXXXXXXX 474 FF GHHAGMWTDTS+ GGWGG+EHG RT+E Sbjct: 475 FFGRGMAANGMGMMGATGMDGHHAGMWTDTSM-GGWGGEEHGRRTRESSYGGDDGASDYG 533 Query: 473 XGEATHER-GRSNAPSWEKDRGSERDWSGNXXXXXXXXXXXXXXXXXXXXXXXXEADGYR 297 GE HE+ GRSN S EK+RGSERDWSGN E DGYR Sbjct: 534 YGEVNHEKVGRSNTASREKERGSERDWSGNSERRHRDEREQDWERSDKDHRYREEKDGYR 593 Query: 296 DHRLXXXXXXXXXXXXXXXXXXXXXXXXSMMQEDDHRSRSRDVDYGKRRRLPSE 135 DHR + ++DHRSRSRD DYGKRRRLPSE Sbjct: 594 DHRQRERDFNNEDDWDRGQSSSRSRSRSRAVADEDHRSRSRDGDYGKRRRLPSE 647 >ref|XP_007044902.1| RNA-binding family protein isoform 1 [Theobroma cacao] gi|590695488|ref|XP_007044903.1| RNA-binding family protein isoform 1 [Theobroma cacao] gi|508708837|gb|EOY00734.1| RNA-binding family protein isoform 1 [Theobroma cacao] gi|508708838|gb|EOY00735.1| RNA-binding family protein isoform 1 [Theobroma cacao] Length = 653 Score = 539 bits (1389), Expect = e-150 Identities = 316/656 (48%), Positives = 375/656 (57%), Gaps = 31/656 (4%) Frame = -1 Query: 2009 MDPMAEEQLDYGDEEYG-TQKMQYQSGGAISALADEDLMGEDDEYDDLYNDVNIGEGFLQ 1833 MD MAEEQ+D+GDEEYG QKMQYQ GAI ALADE++MGEDDEYDDLYNDVN+GEGFLQ Sbjct: 1 MDAMAEEQIDFGDEEYGGAQKMQYQGSGAIPALADEEMMGEDDEYDDLYNDVNVGEGFLQ 60 Query: 1832 LQRSE-PVSLGGVESGGVQTQETDGPGSKAPEHGASQDVNIPGV-VERNDSNIRATVPDQ 1659 LQRSE P GG+ S G+Q Q+ + P + E G SQ +NIPGV V+ N+ A P+Q Sbjct: 61 LQRSEAPPQPGGMGSTGLQAQKNEAPEPRG-EAGGSQGLNIPGVSVQGKHLNVTARYPEQ 119 Query: 1658 -----------AKGGF--------KGSVLEMAREIQVETTGFRDSAPMPPKIGVDPNQIS 1536 G + KG V+E ++ QV+ GF+ + K+G+DP+ + Sbjct: 120 DGQPAVSRPEMGSGSYPSGTSISQKGRVMEGTQDTQVKNMGFQGLSSASHKVGIDPSGVP 179 Query: 1535 GKFVSGSSPLSDAGTGAPRVATQIPINRPGLNINRPMVNENMSRPVVENGATMLFVGELH 1356 K + + ++GTG P+ A +P N+ GLN+N PM++EN RP +ENG TMLFVGELH Sbjct: 180 QKIANVPAQSLNSGTGGPQGAPHVPPNQMGLNVNHPMISENQVRPPIENGPTMLFVGELH 239 Query: 1355 WWTTDAELESVLSQYGRVKEIKFFDERASGKSKGYCQVEFFDAVAAASCKEGMNGYVFNG 1176 WWTTDAELESVLSQYGRVKEIKFFDERASGKSKGYCQVEF+D +AA+CKEGM+GY+FNG Sbjct: 240 WWTTDAELESVLSQYGRVKEIKFFDERASGKSKGYCQVEFYDPASAAACKEGMDGYMFNG 299 Query: 1175 RACVVAFASPQTLKQMGAAYQNKTQVQAQSQPQGRRPMNDGIGRGGGMNY-----XXXXX 1011 RACVVAFASPQTLKQMGA+Y NK Q Q+Q+QPQGRRP NDG+GRGG MNY Sbjct: 300 RACVVAFASPQTLKQMGASYMNKNQGQSQAQPQGRRP-NDGLGRGGNMNYQSGDAGRNYG 358 Query: 1010 XXXXXXXXXXXXXXXXXXXXXXXXXXXGAKSMIXXXXXXXXXXXXGIPYGQXXXXXXXXX 831 G K+M+ G YGQ Sbjct: 359 RGGWGRGGQGVVNRSGVGGPMRGRGGVGVKNMVGSSAGVGNGANGGAAYGQGPAGPPFGG 418 Query: 830 XXXGMMHPQSMMGAGFDXXXXXXXXXXXXXXXXXXXXXXPSFPTMNTVGLPGVAPHVNPA 651 GMMHPQ MMGAGFD PSFP +NT+GL GVAPHVNPA Sbjct: 419 PAGGMMHPQGMMGAGFDPTYMGRGGSYGGFPGPGFPGMLPSFPAVNTLGLAGVAPHVNPA 478 Query: 650 FFXXXXXXXXXXXXXXXXXXGHHAGMWTDTSVGGGWGGDEHG-RTKEXXXXXXXXXXXXX 474 FF G H GMWTDTS+ GGWGGDEHG RT+E Sbjct: 479 FFGRGMAPNGMGMMGGPGMDGPHVGMWTDTSM-GGWGGDEHGRRTRESSYGGEDGASEYG 537 Query: 473 XGEATHERGRSNAPSWEKDRGSERDWSGN---XXXXXXXXXXXXXXXXXXXXXXXXEADG 303 G+A HE+GRS+ S EK+R S+R+WSGN E D Sbjct: 538 YGDANHEKGRSSGASREKERVSDREWSGNSDRRHRDEKERDWDRSEREHREHRYREEKDS 597 Query: 302 YRDHRLXXXXXXXXXXXXXXXXXXXXXXXXSMMQEDDHRSRSRDVDYGKRRRLPSE 135 YR+HR M E+ RSRSRDVDYGKRRRLPSE Sbjct: 598 YREHRHRERDLDYDDDLDRGQSSSRSRRRSHAMPEEQRRSRSRDVDYGKRRRLPSE 653 >ref|XP_007225677.1| hypothetical protein PRUPE_ppa002814mg [Prunus persica] gi|462422613|gb|EMJ26876.1| hypothetical protein PRUPE_ppa002814mg [Prunus persica] Length = 630 Score = 524 bits (1350), Expect = e-145 Identities = 319/641 (49%), Positives = 368/641 (57%), Gaps = 19/641 (2%) Frame = -1 Query: 2000 MAEEQLDYGDEEYG-TQKMQYQSGGAISALADEDLMGEDDEYDDLYNDVNIGEGFLQLQR 1824 MAEEQ+DY DEEYG QK+QYQ GAISALADE+ M EDDEYDDLYNDVN+ EGFLQ+ R Sbjct: 1 MAEEQIDYEDEEYGGAQKLQYQGSGAISALADEEPMVEDDEYDDLYNDVNVREGFLQMHR 60 Query: 1823 SE-PVSLGGVESGGVQTQETDGPGSKAPEHGASQDVNIPGV-VERNDSNIRATVPDQAKG 1650 SE P+ GGV +GG+Q Q+TD ++ + G SQ+ IPGV V+ S+ A P+Q Sbjct: 61 SEAPLPPGGVGNGGLQAQKTDVTETRV-QAGVSQESKIPGVSVQGKYSSAVAQFPEQQ-- 117 Query: 1649 GFKGSVLEMAREIQVETTGFRDSAPMPPKIGVDPNQISGKFVSGSSPLSDAGTGAPRVAT 1470 +A+E ++ +TG+ S MPP +G D + I+GK S P ++GT P T Sbjct: 118 ----GQPPVAKEPELGSTGY-GSTTMPPNVGGDSSDITGKTALESVPSMNSGTAGPTGVT 172 Query: 1469 QIPINRPGL--NINRPMVNENMSRPVVENGATMLFVGELHWWTTDAELESVLSQYGRVKE 1296 Q+P N+ + N NRPM NEN RP VENG+TMLFVGELHWWTTDAELESVLSQYGRVKE Sbjct: 173 QMPTNQISIKVNANRPMFNENQIRPPVENGSTMLFVGELHWWTTDAELESVLSQYGRVKE 232 Query: 1295 IKFFDERASGKSKGYCQVEFFDAVAAASCKEGMNGYVFNGRACVVAFASPQTLKQMGAAY 1116 IKFFDERASGKSKGYCQVEF D AA +CKEGM+GY+FNGRACVVAFASPQTLKQMGA+Y Sbjct: 233 IKFFDERASGKSKGYCQVEFHDPAAATACKEGMDGYLFNGRACVVAFASPQTLKQMGASY 292 Query: 1115 QNKTQVQAQSQPQGRRPMNDGIGRGGGMNY--------XXXXXXXXXXXXXXXXXXXXXX 960 +K+Q Q QSQ GRRPMN+G+GRGGG+NY Sbjct: 293 LSKSQGQTQSQQPGRRPMNEGVGRGGGVNYQTGDTGGRNFGRGGWGRGGQGVANRGPGGG 352 Query: 959 XXXXXXXXXXGAKSMIXXXXXXXXXXXXGIPYGQXXXXXXXXXXXXGMMHPQSMMGAGFD 780 GAK+M G YGQ GMM+PQ MMGAGFD Sbjct: 353 GPMRGRGGAMGAKNMAGNPAGVGTGANGG--YGQGLAGPGFGGPVGGMMNPQGMMGAGFD 410 Query: 779 XXXXXXXXXXXXXXXXXXXXXXPSFPTMNTVGLPGVAPHVNPAFFXXXXXXXXXXXXXXX 600 SFP +NT+GL GVAPHVNPAFF Sbjct: 411 PTYMGRGGGYGGFPGPAFPGMLSSFPAVNTMGLAGVAPHVNPAFFGRGMATNGMGMMGSS 470 Query: 599 XXXGHHAGMWTDTSVGGGWGGDEHG-RTKEXXXXXXXXXXXXXXGEATHER-GRSNAPSW 426 GHHAGMW D S+ GGWGGDEHG RT+E GEA HE+ GRSNAPS Sbjct: 471 GMDGHHAGMWNDPSM-GGWGGDEHGRRTRESSYGGDDGASEYGYGEANHEKGGRSNAPSR 529 Query: 425 EKDRGSERDWSGN----XXXXXXXXXXXXXXXXXXXXXXXXEADGYRDHRLXXXXXXXXX 258 E++RGSERDWSGN E D YRDHR Sbjct: 530 ERERGSERDWSGNSERRHRDEREQDWDRSERGEHREHRYKEEKDSYRDHRQRERDVGYED 589 Query: 257 XXXXXXXXXXXXXXXSMMQEDDHRSRSRDVDYGKRRRLPSE 135 M EDDHRSRSRDVDYGKRRRLPSE Sbjct: 590 DWDRGQSSSRPRSRSKAMPEDDHRSRSRDVDYGKRRRLPSE 630 >ref|XP_007044904.1| RNA-binding family protein isoform 1 [Theobroma cacao] gi|590695496|ref|XP_007044905.1| RNA-binding family protein isoform 1 [Theobroma cacao] gi|590695500|ref|XP_007044906.1| RNA-binding family protein isoform 1 [Theobroma cacao] gi|508708839|gb|EOY00736.1| RNA-binding family protein isoform 1 [Theobroma cacao] gi|508708840|gb|EOY00737.1| RNA-binding family protein isoform 1 [Theobroma cacao] gi|508708841|gb|EOY00738.1| RNA-binding family protein isoform 1 [Theobroma cacao] Length = 652 Score = 524 bits (1349), Expect = e-145 Identities = 309/656 (47%), Positives = 372/656 (56%), Gaps = 31/656 (4%) Frame = -1 Query: 2009 MDPMAEEQLDYGDEEYGT-QKMQYQSGGAISALADEDLMGEDDEYDDLYNDVNIGEGFLQ 1833 MD MAEEQ+D+GDEEYG QKMQYQ GAI ALADE++MGEDDEYDDLYNDVN+GEGFLQ Sbjct: 1 MDAMAEEQIDFGDEEYGGGQKMQYQGSGAIPALADEEMMGEDDEYDDLYNDVNVGEGFLQ 60 Query: 1832 LQRSE-PVSLGGVESGGVQTQETDGPGSKAPEHGASQDVNIPGV-VERNDSNIRATVPDQ 1659 LQRSE P+ GG+ S G++ Q + P + E G SQ +NIPGV V+ N+ A P++ Sbjct: 61 LQRSEAPLQPGGLGSTGLKAQRNEAPEPRV-EAGGSQGLNIPGVSVQGKHPNVSARYPEK 119 Query: 1658 AK-----------GGF--------KGSVLEMAREIQVETTGFRDSAPMPPKIGVDPNQIS 1536 + G + KGSV E + QV+ GF+ K+G+DP+ + Sbjct: 120 EEQPAVNRPEMVSGSYPSGSSISQKGSVTEGTHDKQVKNLGFQGLTSASNKVGIDPSGVP 179 Query: 1535 GKFVSGSSPLSDAGTGAPRVATQIPINRPGLNINRPMVNENMSRPVVENGATMLFVGELH 1356 K + + ++GTG P+ +P N+ G N+N P++NEN +P +ENG TMLFVGELH Sbjct: 180 QKIANDPAQSLNSGTGGPQGPPHVPPNQMGTNVNHPVMNENQVQPPIENGPTMLFVGELH 239 Query: 1355 WWTTDAELESVLSQYGRVKEIKFFDERASGKSKGYCQVEFFDAVAAASCKEGMNGYVFNG 1176 WWTTDAELESVLSQYGR+KEIKFFDE+ASGKSKGYCQVEF+D +AA CKEGMNGY+FNG Sbjct: 240 WWTTDAELESVLSQYGRLKEIKFFDEKASGKSKGYCQVEFYDPSSAAVCKEGMNGYMFNG 299 Query: 1175 RACVVAFASPQTLKQMGAAYQNKTQVQAQSQPQGRRPMNDGIGRGGGMNY-----XXXXX 1011 RACVVAFASPQTLKQMGA+Y NK Q Q+Q+QPQGRRP N+G+GRGG +NY Sbjct: 300 RACVVAFASPQTLKQMGASYMNKNQGQSQAQPQGRRP-NEGLGRGGNLNYQSGDAGRNYG 358 Query: 1010 XXXXXXXXXXXXXXXXXXXXXXXXXXXGAKSMIXXXXXXXXXXXXGIPYGQXXXXXXXXX 831 G K+M+ YGQ Sbjct: 359 RGGWGRGGQGGVNRAGGGGLMRGRGGVGVKNMVGISAGVGNGANGAGAYGQ-GPGPAFGG 417 Query: 830 XXXGMMHPQSMMGAGFDXXXXXXXXXXXXXXXXXXXXXXPSFPTMNTVGLPGVAPHVNPA 651 GMMHPQ MMGAGFD PSFP +NT+GL GVAPHVNPA Sbjct: 418 PAGGMMHPQGMMGAGFDPTYMVRGGGYGGFPGPGFPGMLPSFPAVNTMGLAGVAPHVNPA 477 Query: 650 FFXXXXXXXXXXXXXXXXXXGHHAGMWTDTSVGGGWGGDEHG-RTKEXXXXXXXXXXXXX 474 FF G HAGMWTD S+ GGWGGDEHG RT+E Sbjct: 478 FFGRGMAPNGMGMMGASGMDGPHAGMWTDASM-GGWGGDEHGRRTRESSYGGEDGASEYG 536 Query: 473 XGEATHERGRSNAPSWEKDRGSERDWSGN---XXXXXXXXXXXXXXXXXXXXXXXXEADG 303 G+A HE+GRS+ S EK+R SER+WSGN E D Sbjct: 537 YGDANHEKGRSSGASREKERVSEREWSGNSDRRHRDEKEQDWDRSEREHREHRYREEKDS 596 Query: 302 YRDHRLXXXXXXXXXXXXXXXXXXXXXXXXSMMQEDDHRSRSRDVDYGKRRRLPSE 135 YR+HR M E++HRSRSRDVDYGK+RRLPSE Sbjct: 597 YREHRHRERDLDYDDDWDRGQSSSRSRRRSHAMPEEEHRSRSRDVDYGKKRRLPSE 652 >ref|XP_006438179.1| hypothetical protein CICLE_v10030915mg [Citrus clementina] gi|557540375|gb|ESR51419.1| hypothetical protein CICLE_v10030915mg [Citrus clementina] Length = 658 Score = 515 bits (1326), Expect = e-143 Identities = 319/662 (48%), Positives = 367/662 (55%), Gaps = 37/662 (5%) Frame = -1 Query: 2009 MDPMAEEQLDYGDEEYG-TQKMQYQSGGAISALADEDLMGEDDEYDDLYNDVNIGEGFLQ 1833 MD MAEEQ+DY +EEYG QKMQYQ GGAI ALADE+LMGEDDEYDDLYNDVN+G+G LQ Sbjct: 1 MDSMAEEQIDYEEEEYGGAQKMQYQGGGAIPALADEELMGEDDEYDDLYNDVNVGDGLLQ 60 Query: 1832 LQRSE-PVSLGGVESGGVQTQETDGPGSKAPEHGASQDVNIPGV-VE------------R 1695 Q+ E P GV +G +Q ++TD P + + G SQ N+PGV VE + Sbjct: 61 FQQPEAPPPSAGVGNGRLQVKKTDVPEQQV-QAGVSQGSNVPGVSVEGKYTNAGTHFPAQ 119 Query: 1694 NDSNIRATVPDQAKGGF--------KGSVLEMAREIQVETTGFRDSAPMPPKIGVDPNQI 1539 ND + P+ G + KGSV E + V GF+ S PP+ GVDP+ + Sbjct: 120 NDVQVAVNRPNMGSGNYPDGASVSQKGSVQETTHDAHVRNMGFQGSTSGPPRTGVDPSNM 179 Query: 1538 SGKFVSGSSPLSDAGTGAPRVATQIPINRPGLNIN--RPMVNENMSRPVVENGATMLFVG 1365 G+ + +P+ + G P+ A IP N+ G+NIN R MVNEN RP +ENG TMLFVG Sbjct: 180 PGRVANEPAPVLNPGAAGPQGAL-IPANQMGVNINVNRAMVNENQIRPPLENGGTMLFVG 238 Query: 1364 ELHWWTTDAELESVLSQYGRVKEIKFFDERASGKSKGYCQVEFFDAVAAASCKEGMNGYV 1185 ELHWWTTDAELESVLSQYGRVKEIKFFDERASGKSKGYCQVEFFDA AAA+CK+GMNG+V Sbjct: 239 ELHWWTTDAELESVLSQYGRVKEIKFFDERASGKSKGYCQVEFFDAAAAAACKDGMNGHV 298 Query: 1184 FNGRACVVAFASPQTLKQMGAAYQNKTQVQAQSQPQGRRPMNDGIGRGGGMNY-----XX 1020 FNGR CVVAFASPQTLKQMGA+Y NK Q Q QSQ QGRRPMNDG GRGG MNY Sbjct: 299 FNGRPCVVAFASPQTLKQMGASYMNKNQGQPQSQTQGRRPMNDGGGRGGNMNYQSGDGGR 358 Query: 1019 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGAKSMIXXXXXXXXXXXXGI--PYGQXXXX 846 GAK+M+ YGQ Sbjct: 359 NFGRGGWGRGGQGVPNRGPGGGAMRGRGPMGAKNMMGSSSGAGSGAGPAAGGGYGQGLAG 418 Query: 845 XXXXXXXXGMMHPQSMMGAGFDXXXXXXXXXXXXXXXXXXXXXXPSFPTMNTVGLPGVAP 666 GMMHPQ+MMG GFD PSFP +N +GL GVAP Sbjct: 419 PGFGGPAGGMMHPQNMMG-GFDPTYMGRGGGYGGFSGPGFPGMLPSFPAVNAMGLAGVAP 477 Query: 665 HVNPAFFXXXXXXXXXXXXXXXXXXGHHAGMWTDTSVGGGWGGDEHG-RTKEXXXXXXXX 489 HVNPAFF G H GMWTD+S+ GGW G+EHG RT+E Sbjct: 478 HVNPAFFNRGMAANGMGMMGSSGMDGPHPGMWTDSSM-GGWVGEEHGRRTRESSYGGDDG 536 Query: 488 XXXXXXGEATHERG-RSNAPSWEKDRGSERDWSGN---XXXXXXXXXXXXXXXXXXXXXX 321 GEA HE+G RS A S EKDRGSERDWSGN Sbjct: 537 ASDYGYGEANHEKGARSTAASREKDRGSERDWSGNTDRRHREEREQDWDRSERDHRDHRH 596 Query: 320 XXEADGYRDHRLXXXXXXXXXXXXXXXXXXXXXXXXSMMQEDDHRSRSRDVDYGKRRRLP 141 E D YRD R + ++DHRSRSRDVDYGKRRRLP Sbjct: 597 REEKDSYRDRRQRDRDSTYDDNWDRGPSSSRSRSRSRAIPDEDHRSRSRDVDYGKRRRLP 656 Query: 140 SE 135 SE Sbjct: 657 SE 658 >ref|XP_006483997.1| PREDICTED: cleavage and polyadenylation specificity factor subunit CG7185-like isoform X1 [Citrus sinensis] Length = 658 Score = 511 bits (1317), Expect = e-142 Identities = 318/662 (48%), Positives = 366/662 (55%), Gaps = 37/662 (5%) Frame = -1 Query: 2009 MDPMAEEQLDYGDEEYG-TQKMQYQSGGAISALADEDLMGEDDEYDDLYNDVNIGEGFLQ 1833 MD MAEEQ+DY +EEYG QKMQYQ GGAI ALADE+LMGEDDEYDDLYNDVN+G+G LQ Sbjct: 1 MDSMAEEQIDYEEEEYGGAQKMQYQGGGAIPALADEELMGEDDEYDDLYNDVNVGDGLLQ 60 Query: 1832 LQRSE-PVSLGGVESGGVQTQETDGPGSKAPEHGASQDVNIPGV-VE------------R 1695 Q+ E P GV +G +Q ++TD P + + G SQ N+PGV VE + Sbjct: 61 FQQPEAPPPSAGVGNGRLQVKKTDVPEQQV-QAGVSQGSNVPGVSVEGKYTNAGTHFPAQ 119 Query: 1694 NDSNIRATVPDQAKGGF--------KGSVLEMAREIQVETTGFRDSAPMPPKIGVDPNQI 1539 ND + P+ G + KGSV E + V GF+ S P + GVDP+ + Sbjct: 120 NDVQVAVNRPNMGSGNYPDGASVSQKGSVQETTHDAHVRNMGFQGSTSGPSRTGVDPSNM 179 Query: 1538 SGKFVSGSSPLSDAGTGAPRVATQIPINRPGLNIN--RPMVNENMSRPVVENGATMLFVG 1365 G+ + +P+ + G P+ A IP N+ G+NIN R MVNEN RP +ENG TMLFVG Sbjct: 180 PGRVANEPAPVLNPGAAGPQGAL-IPANQMGVNINVNRAMVNENQIRPPLENGGTMLFVG 238 Query: 1364 ELHWWTTDAELESVLSQYGRVKEIKFFDERASGKSKGYCQVEFFDAVAAASCKEGMNGYV 1185 ELHWWTTDAELESVLSQYGRVKEIKFFDERASGKSKGYCQVEFFDA AAA+CK+GMNG+V Sbjct: 239 ELHWWTTDAELESVLSQYGRVKEIKFFDERASGKSKGYCQVEFFDAAAAAACKDGMNGHV 298 Query: 1184 FNGRACVVAFASPQTLKQMGAAYQNKTQVQAQSQPQGRRPMNDGIGRGGGMNY-----XX 1020 FNGR CVVAFASPQTLKQMGA+Y NK Q Q QSQ QGRRPMNDG GRGG MNY Sbjct: 299 FNGRPCVVAFASPQTLKQMGASYMNKNQGQPQSQTQGRRPMNDGGGRGGNMNYQSGDGGR 358 Query: 1019 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGAKSMIXXXXXXXXXXXXGI--PYGQXXXX 846 GA++MI YGQ Sbjct: 359 NFGRGGWGRGGQGVPNRGPGGGAMRGRGPMGARNMIGSSSGAGSGVGHAAGGGYGQGLAG 418 Query: 845 XXXXXXXXGMMHPQSMMGAGFDXXXXXXXXXXXXXXXXXXXXXXPSFPTMNTVGLPGVAP 666 GMMHPQ+MMG GFD PSFP +N +GL GVAP Sbjct: 419 PGFGGPAGGMMHPQNMMG-GFDPTYMGRGGGYGGFSGPGFPGMLPSFPAVNAMGLAGVAP 477 Query: 665 HVNPAFFXXXXXXXXXXXXXXXXXXGHHAGMWTDTSVGGGWGGDEHG-RTKEXXXXXXXX 489 HVNPAFF G H GMWTD+S+ GGW G+EHG RT+E Sbjct: 478 HVNPAFFNRGMAANGMGMMGSSGMDGPHPGMWTDSSM-GGWLGEEHGRRTRESSYGGDDG 536 Query: 488 XXXXXXGEATHERG-RSNAPSWEKDRGSERDWSGN---XXXXXXXXXXXXXXXXXXXXXX 321 GEA HE+G RS A S EKDRGSERDWSGN Sbjct: 537 ASDYGYGEANHEKGARSTAASREKDRGSERDWSGNTDRRHREEREQDWDRSERDHRDHRH 596 Query: 320 XXEADGYRDHRLXXXXXXXXXXXXXXXXXXXXXXXXSMMQEDDHRSRSRDVDYGKRRRLP 141 E D YRD R + ++DHRSRSRDVDYGKRRRLP Sbjct: 597 REEKDSYRDRRQRDRDSTYDDNWDRGPSSSRSRSRSRAIPDEDHRSRSRDVDYGKRRRLP 656 Query: 140 SE 135 SE Sbjct: 657 SE 658 >ref|XP_007044908.1| RNA-binding family protein isoform 5, partial [Theobroma cacao] gi|508708843|gb|EOY00740.1| RNA-binding family protein isoform 5, partial [Theobroma cacao] Length = 656 Score = 505 bits (1300), Expect = e-140 Identities = 300/651 (46%), Positives = 364/651 (55%), Gaps = 31/651 (4%) Frame = -1 Query: 2009 MDPMAEEQLDYGDEEYGT-QKMQYQSGGAISALADEDLMGEDDEYDDLYNDVNIGEGFLQ 1833 MD MAEEQ+D+GDEEYG QKMQYQ GAI ALADE++MGEDDEYDDLYNDVN+GEGFLQ Sbjct: 1 MDAMAEEQIDFGDEEYGGGQKMQYQGSGAIPALADEEMMGEDDEYDDLYNDVNVGEGFLQ 60 Query: 1832 LQRSE-PVSLGGVESGGVQTQETDGPGSKAPEHGASQDVNIPGV-VERNDSNIRATVPDQ 1659 LQRSE P+ GG+ S G++ Q + P + E G SQ +NIPGV V+ N+ A P++ Sbjct: 61 LQRSEAPLQPGGLGSTGLKAQRNEAPEPRV-EAGGSQGLNIPGVSVQGKHPNVSARYPEK 119 Query: 1658 AK-----------GGF--------KGSVLEMAREIQVETTGFRDSAPMPPKIGVDPNQIS 1536 + G + KGSV E + QV+ GF+ K+G+DP+ + Sbjct: 120 EEQPAVNRPEMVSGSYPSGSSISQKGSVTEGTHDKQVKNLGFQGLTSASNKVGIDPSGVP 179 Query: 1535 GKFVSGSSPLSDAGTGAPRVATQIPINRPGLNINRPMVNENMSRPVVENGATMLFVGELH 1356 K + + ++GTG P+ +P N+ G N+N P++NEN +P +ENG TMLFVGELH Sbjct: 180 QKIANDPAQSLNSGTGGPQGPPHVPPNQMGTNVNHPVMNENQVQPPIENGPTMLFVGELH 239 Query: 1355 WWTTDAELESVLSQYGRVKEIKFFDERASGKSKGYCQVEFFDAVAAASCKEGMNGYVFNG 1176 WWTTDAELESVLSQYGR+KEIKFFDE+ASGKSKGYCQVEF+D +AA CKEGMNGY+FNG Sbjct: 240 WWTTDAELESVLSQYGRLKEIKFFDEKASGKSKGYCQVEFYDPSSAAVCKEGMNGYMFNG 299 Query: 1175 RACVVAFASPQTLKQMGAAYQNKTQVQAQSQPQGRRPMNDGIGRGGGMNY-----XXXXX 1011 RACVVAFASPQTLKQMGA+Y NK Q Q+Q+QPQGRRP N+G+GRGG +NY Sbjct: 300 RACVVAFASPQTLKQMGASYMNKNQGQSQAQPQGRRP-NEGLGRGGNLNYQSGDAGRNYG 358 Query: 1010 XXXXXXXXXXXXXXXXXXXXXXXXXXXGAKSMIXXXXXXXXXXXXGIPYGQXXXXXXXXX 831 G K+M+ YGQ Sbjct: 359 RGGWGRGGQGGVNRAGGGGLMRGRGGVGVKNMVGISAGVGNGANGAGAYGQ-GPGPAFGG 417 Query: 830 XXXGMMHPQSMMGAGFDXXXXXXXXXXXXXXXXXXXXXXPSFPTMNTVGLPGVAPHVNPA 651 GMMHPQ MMGAGFD PSFP +NT+GL GVAPHVNPA Sbjct: 418 PAGGMMHPQGMMGAGFDPTYMVRGGGYGGFPGPGFPGMLPSFPAVNTMGLAGVAPHVNPA 477 Query: 650 FFXXXXXXXXXXXXXXXXXXGHHAGMWTDTSVGGGWGGDEHG-RTKEXXXXXXXXXXXXX 474 FF G HAGMWTD S+ GGWGGDEHG RT+E Sbjct: 478 FFGRGMAPNGMGMMGASGMDGPHAGMWTDASM-GGWGGDEHGRRTRESSYGGEDGASEYG 536 Query: 473 XGEATHERGRSNAPSWEKDRGSERDWSGN---XXXXXXXXXXXXXXXXXXXXXXXXEADG 303 G+A HE+GRS+ S EK+R SER+WSGN E D Sbjct: 537 YGDANHEKGRSSGASREKERVSEREWSGNSDRRHRDEKEQDWDRSEREHREHRYREEKDS 596 Query: 302 YRDHRLXXXXXXXXXXXXXXXXXXXXXXXXSMMQEDDHRSRSRDVDYGKRR 150 YR+HR M E++HRSRSRDV Y + + Sbjct: 597 YREHRHRERDLDYDDDWDRGQSSSRSRRRSHAMPEEEHRSRSRDVGYREEK 647 >ref|XP_006483998.1| PREDICTED: cleavage and polyadenylation specificity factor subunit CG7185-like isoform X1 [Citrus sinensis] Length = 655 Score = 499 bits (1286), Expect = e-138 Identities = 312/659 (47%), Positives = 361/659 (54%), Gaps = 37/659 (5%) Frame = -1 Query: 2000 MAEEQLDYGDEEYG-TQKMQYQSGGAISALADEDLMGEDDEYDDLYNDVNIGEGFLQLQR 1824 MAEEQ+DY ++EYG QKMQYQ GGAI ALADE+LMGEDDEYDDLYNDVN+G+G LQ Q+ Sbjct: 1 MAEEQIDYEEDEYGGAQKMQYQGGGAIPALADEELMGEDDEYDDLYNDVNVGDGLLQFQQ 60 Query: 1823 SE-PVSLGGVESGGVQTQETDGPGSKAPEHGASQDVNIPGV-VE------------RNDS 1686 E P GV +G +Q ++TD P + + G SQ NIPGV VE +ND Sbjct: 61 PEAPPPSAGVGNGRLQVKKTDVPEQRV-QVGGSQGSNIPGVSVEGKYTNAGSHFPAQNDV 119 Query: 1685 NIRATVPDQAKGGF--------KGSVLEMAREIQVETTGFRDSAPMPPKIGVDPNQISGK 1530 + P+ G + KGSV E + V GF+ S P + GVDP+ + G+ Sbjct: 120 QVAVNRPNMGSGNYPDGASVSQKGSVQETTHDAHVRNMGFQGSTSGPSRTGVDPSNMPGR 179 Query: 1529 FVSGSSPLSDAGTGAPRVATQIPINRPGLN--INRPMVNENMSRPVVENGATMLFVGELH 1356 + +P+ + G P+ A IP N+ G+N +NR MVNEN RP +ENG TMLFVGELH Sbjct: 180 VANEPAPVLNPGAAGPQGAL-IPANQMGVNANVNRVMVNENQIRPPLENGGTMLFVGELH 238 Query: 1355 WWTTDAELESVLSQYGRVKEIKFFDERASGKSKGYCQVEFFDAVAAASCKEGMNGYVFNG 1176 WWTTDAELESVLSQYGR KEIKFFDERASGKSKGYCQVEFFDA AAA+CK+GMNG+VFNG Sbjct: 239 WWTTDAELESVLSQYGRAKEIKFFDERASGKSKGYCQVEFFDAAAAAACKDGMNGHVFNG 298 Query: 1175 RACVVAFASPQTLKQMGAAYQNKTQVQAQSQPQGRRPMNDGIGRGGGMNY-----XXXXX 1011 R CVVAFASPQTLKQMGA+Y NK Q Q QSQ QG RPMNDG GRGG NY Sbjct: 299 RPCVVAFASPQTLKQMGASYMNKNQGQPQSQNQGSRPMNDGGGRGGNTNYQSGDGGRNFG 358 Query: 1010 XXXXXXXXXXXXXXXXXXXXXXXXXXXGAKSMIXXXXXXXXXXXXGI--PYGQXXXXXXX 837 GA++MI YGQ Sbjct: 359 RGGWGRGGQGVPNRGPGGGAMRGRGPMGARNMIGSSSGAGSGVGHAAGGGYGQGLAGPGF 418 Query: 836 XXXXXGMMHPQSMMGAGFDXXXXXXXXXXXXXXXXXXXXXXPSFPTMNTVGLPGVAPHVN 657 GMMHPQ+MMG GFD PSFP +N +GL GVAPHVN Sbjct: 419 GGPAGGMMHPQNMMG-GFDPTYMGRGGGYGGFSGPGFPGMLPSFPAVNAMGLAGVAPHVN 477 Query: 656 PAFFXXXXXXXXXXXXXXXXXXGHHAGMWTDTSVGGGWGGDEHG-RTKEXXXXXXXXXXX 480 PAFF G H GMWTD+S+ GGW G+EHG RT+E Sbjct: 478 PAFFNRGMAANGMGMMGSSGMDGPHPGMWTDSSM-GGWLGEEHGRRTRESSYGGDDGASD 536 Query: 479 XXXGEATHERG-RSNAPSWEKDRGSERDWSGN---XXXXXXXXXXXXXXXXXXXXXXXXE 312 GEA HE+G RS A S EKDRGSERDWSGN E Sbjct: 537 YGYGEANHEKGARSTAASREKDRGSERDWSGNTDRRHREEREQDWDRSERDHRDHRHREE 596 Query: 311 ADGYRDHRLXXXXXXXXXXXXXXXXXXXXXXXXSMMQEDDHRSRSRDVDYGKRRRLPSE 135 D YRD R + ++DHRSRSRDVDYGKRRRLPSE Sbjct: 597 KDSYRDRRQRDRDSTYDDNWDRGQSSSRSRSRSGAIPDEDHRSRSRDVDYGKRRRLPSE 655 >ref|XP_006438180.1| hypothetical protein CICLE_v10030917mg [Citrus clementina] gi|567891321|ref|XP_006438181.1| hypothetical protein CICLE_v10030917mg [Citrus clementina] gi|557540376|gb|ESR51420.1| hypothetical protein CICLE_v10030917mg [Citrus clementina] gi|557540377|gb|ESR51421.1| hypothetical protein CICLE_v10030917mg [Citrus clementina] Length = 655 Score = 498 bits (1282), Expect = e-138 Identities = 310/659 (47%), Positives = 361/659 (54%), Gaps = 37/659 (5%) Frame = -1 Query: 2000 MAEEQLDYGDEEYG-TQKMQYQSGGAISALADEDLMGEDDEYDDLYNDVNIGEGFLQLQR 1824 MAEEQ+DY ++EYG QKMQYQ GGAI ALADE+LMGEDDEYDDLYND+N+G+G LQ Q+ Sbjct: 1 MAEEQIDYEEDEYGGAQKMQYQGGGAIPALADEELMGEDDEYDDLYNDINVGDGLLQFQQ 60 Query: 1823 SE-PVSLGGVESGGVQTQETDGPGSKAPEHGASQDVNIPGV-VE------------RNDS 1686 E P GV +G +Q ++TD P + + G SQ NIPGV VE +ND Sbjct: 61 PEAPPPSAGVGNGRLQVKKTDVPEQRV-QVGGSQGSNIPGVSVEGKYTNAGSDFPAQNDV 119 Query: 1685 NIRATVPDQAKGGF--------KGSVLEMAREIQVETTGFRDSAPMPPKIGVDPNQISGK 1530 + P+ G + KGSV E + V GF+ S P + GVDP+ + G+ Sbjct: 120 QVAVNRPNMGSGNYPDGASVSQKGSVQETTHDAHVRNMGFQGSTSGPSRTGVDPSNMPGR 179 Query: 1529 FVSGSSPLSDAGTGAPRVATQIPINRPGLN--INRPMVNENMSRPVVENGATMLFVGELH 1356 + +P+ + G P+ A IP N+ G+N +NR MVNEN RP +ENG TMLFVGELH Sbjct: 180 AANEPAPVLNPGAAGPQGAL-IPANQMGVNANVNRVMVNENQIRPPLENGGTMLFVGELH 238 Query: 1355 WWTTDAELESVLSQYGRVKEIKFFDERASGKSKGYCQVEFFDAVAAASCKEGMNGYVFNG 1176 WWTTDAELESVLSQYGR KEIKFFDERASGKSKGYCQVEFFDA AAA+CK+GMNG+VFNG Sbjct: 239 WWTTDAELESVLSQYGRAKEIKFFDERASGKSKGYCQVEFFDAAAAAACKDGMNGHVFNG 298 Query: 1175 RACVVAFASPQTLKQMGAAYQNKTQVQAQSQPQGRRPMNDGIGRGGGMNY-----XXXXX 1011 R CVVAFASPQTLKQMGA+Y NK Q Q QSQ QG RPMNDG GRGG NY Sbjct: 299 RPCVVAFASPQTLKQMGASYMNKNQGQPQSQNQGSRPMNDGGGRGGNTNYQSGDGGRNFG 358 Query: 1010 XXXXXXXXXXXXXXXXXXXXXXXXXXXGAKSMIXXXXXXXXXXXXGI--PYGQXXXXXXX 837 GA++MI YGQ Sbjct: 359 RGGWGRGGQGVPNRGPGGGAMRGRGPMGARNMIGSSSGAGSGAGHAAGGGYGQGLAGPGF 418 Query: 836 XXXXXGMMHPQSMMGAGFDXXXXXXXXXXXXXXXXXXXXXXPSFPTMNTVGLPGVAPHVN 657 GMMHPQ+MMG GFD PSFP +N +GL GVAPHVN Sbjct: 419 GGPAGGMMHPQNMMG-GFDPTYMGRGGGYGGFSGPGFPGMLPSFPAVNAMGLAGVAPHVN 477 Query: 656 PAFFXXXXXXXXXXXXXXXXXXGHHAGMWTDTSVGGGWGGDEHG-RTKEXXXXXXXXXXX 480 PAFF G H GMWTD+S+ GGW G+EHG RT+E Sbjct: 478 PAFFNRGMAANGMGMMGSSGMDGPHPGMWTDSSM-GGWVGEEHGRRTRESSYGGDDGASD 536 Query: 479 XXXGEATHERG-RSNAPSWEKDRGSERDWSGN---XXXXXXXXXXXXXXXXXXXXXXXXE 312 GEA+HE+G RS S EKDRGSERDWSGN E Sbjct: 537 YGYGEASHEKGARSTTASREKDRGSERDWSGNTDRRHREEREQDWDRSERDHRDHRHREE 596 Query: 311 ADGYRDHRLXXXXXXXXXXXXXXXXXXXXXXXXSMMQEDDHRSRSRDVDYGKRRRLPSE 135 D YRD R + ++DHRSRSRDVDYGKRRRLPSE Sbjct: 597 KDSYRDRRQRDRDSTYDDNWDRGQSSSRSRSRSGAIPDEDHRSRSRDVDYGKRRRLPSE 655 >ref|XP_006341786.1| PREDICTED: cleavage and polyadenylation specificity factor subunit CG7185-like isoform X1 [Solanum tuberosum] gi|565349616|ref|XP_006341787.1| PREDICTED: cleavage and polyadenylation specificity factor subunit CG7185-like isoform X2 [Solanum tuberosum] Length = 648 Score = 495 bits (1275), Expect = e-137 Identities = 300/657 (45%), Positives = 358/657 (54%), Gaps = 32/657 (4%) Frame = -1 Query: 2009 MDPMAEEQLDYGDEEYG-TQKMQYQSGGAISALADEDLMGEDDEYDDLYNDVNIGEGFLQ 1833 MDP A+EQLDYGDEEYG + KMQY G I ALA++++MGEDDEYDDLYNDVNIGEGFLQ Sbjct: 1 MDPTADEQLDYGDEEYGGSHKMQYHGSGTIPALAEDEMMGEDDEYDDLYNDVNIGEGFLQ 60 Query: 1832 LQRSE-PVSLGGVESGGVQTQETDGPGSKAPEHGASQDVNIPGVV-ERNDSNIRATVPDQ 1659 LQRSE PV +G Q Q+ P S+A G S++ IPG+ E + P Q Sbjct: 61 LQRSEVPVPSVDAGNGNFQAQKDSFPASRAGGLG-SEEAKIPGIATEGKYAGTEVQFPQQ 119 Query: 1658 ---------------AKGGFKGSVLEMAREIQVETTGFRDSAPMPPKIGVDPNQISGKFV 1524 A + S + M Q +G++ S PMP KIG DP + K Sbjct: 120 KGEPVVERETERPADAAQKARPSAITMTLNSQAGNSGYQGSMPMPQKIGADPMAMPEKNA 179 Query: 1523 SGSSPLSDAGTGAPRVATQIPINR----PGLNINRPMVNENMSRPVVENGATMLFVGELH 1356 S ++PL ++ PRV +P N+ +N+N P+++E RP +ENG TMLFVGELH Sbjct: 180 SEATPLMNSVVPGPRVVPHMPTNQLNSSGNVNMNNPVISETPFRPSLENGNTMLFVGELH 239 Query: 1355 WWTTDAELESVLSQYGRVKEIKFFDERASGKSKGYCQVEFFDAVAAASCKEGMNGYVFNG 1176 WWTTDAELESVL+QYG VKEIKFFDERASGKSKGYCQVEFFD +AA+CKEGMNGY FNG Sbjct: 240 WWTTDAELESVLTQYGNVKEIKFFDERASGKSKGYCQVEFFDPASAAACKEGMNGYNFNG 299 Query: 1175 RACVVAFASPQTLKQMGAAYQNKTQVQAQSQPQGRRPMNDGIGRGG--------GMNYXX 1020 RACVVAFA+PQT+KQMG++Y NKTQ Q QSQPQGRRPMN+G+GRGG G N+ Sbjct: 300 RACVVAFATPQTIKQMGSSYANKTQNQVQSQPQGRRPMNEGVGRGGPNYTPGDAGRNF-- 357 Query: 1019 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGAKSMIXXXXXXXXXXXXGIPYGQXXXXXX 840 G+K+M+ +GQ Sbjct: 358 --GRGSWGRGGPGMPNRGPGGGPVRGRGAMGSKNMMVNPGAGNGAGG---AFGQGLAGPA 412 Query: 839 XXXXXXGMMHPQSMMGAGFDXXXXXXXXXXXXXXXXXXXXXXPSFPTMNTVGLPGVAPHV 660 G+MHPQ MMG GFD P F +N +GLPGVAPHV Sbjct: 413 FGGPPAGLMHPQGMMGPGFDPSFMGRGAGYGGFSGPAFPGMMPPFQAVNPMGLPGVAPHV 472 Query: 659 NPAFFXXXXXXXXXXXXXXXXXXGHHAGMWTDTSVGGGWGGDEHG-RTKEXXXXXXXXXX 483 NPAFF G H GMWTDTS GGGWGG+EHG RT+E Sbjct: 473 NPAFFGRGMAANGMGMMSAAGMDGPHPGMWTDTS-GGGWGGEEHGRRTRESSYGGEDNAS 531 Query: 482 XXXXGEATHERG-RSNAPSWEKDRGSERDWSGNXXXXXXXXXXXXXXXXXXXXXXXXEAD 306 GE +H++G RS+A S EK+RGSERDWSGN E D Sbjct: 532 EYGYGEVSHDKGARSSAVSREKERGSERDWSGNSDKRHRDEREHDRDRHDKEHRYREERD 591 Query: 305 GYRDHRLXXXXXXXXXXXXXXXXXXXXXXXXSMMQEDDHRSRSRDVDYGKRRRLPSE 135 GYRD+R QE+DHRSRSRD +YGKRRR PSE Sbjct: 592 GYRDYRQKERESEYEEDYDRGQSSSRSRSKSRAAQEEDHRSRSRDTNYGKRRRAPSE 648 >ref|XP_007044909.1| RNA-binding family protein isoform 6 [Theobroma cacao] gi|508708844|gb|EOY00741.1| RNA-binding family protein isoform 6 [Theobroma cacao] Length = 602 Score = 495 bits (1275), Expect = e-137 Identities = 283/569 (49%), Positives = 342/569 (60%), Gaps = 28/569 (4%) Frame = -1 Query: 2009 MDPMAEEQLDYGDEEYGT-QKMQYQSGGAISALADEDLMGEDDEYDDLYNDVNIGEGFLQ 1833 MD MAEEQ+D+GDEEYG QKMQYQ GAI ALADE++MGEDDEYDDLYNDVN+GEGFLQ Sbjct: 1 MDAMAEEQIDFGDEEYGGGQKMQYQGSGAIPALADEEMMGEDDEYDDLYNDVNVGEGFLQ 60 Query: 1832 LQRSE-PVSLGGVESGGVQTQETDGPGSKAPEHGASQDVNIPGV-VERNDSNIRATVPDQ 1659 LQRSE P+ GG+ S G++ Q + P + E G SQ +NIPGV V+ N+ A P++ Sbjct: 61 LQRSEAPLQPGGLGSTGLKAQRNEAPEPRV-EAGGSQGLNIPGVSVQGKHPNVSARYPEK 119 Query: 1658 AK-----------GGF--------KGSVLEMAREIQVETTGFRDSAPMPPKIGVDPNQIS 1536 + G + KGSV E + QV+ GF+ K+G+DP+ + Sbjct: 120 EEQPAVNRPEMVSGSYPSGSSISQKGSVTEGTHDKQVKNLGFQGLTSASNKVGIDPSGVP 179 Query: 1535 GKFVSGSSPLSDAGTGAPRVATQIPINRPGLNINRPMVNENMSRPVVENGATMLFVGELH 1356 K + + ++GTG P+ +P N+ G N+N P++NEN +P +ENG TMLFVGELH Sbjct: 180 QKIANDPAQSLNSGTGGPQGPPHVPPNQMGTNVNHPVMNENQVQPPIENGPTMLFVGELH 239 Query: 1355 WWTTDAELESVLSQYGRVKEIKFFDERASGKSKGYCQVEFFDAVAAASCKEGMNGYVFNG 1176 WWTTDAELESVLSQYGR+KEIKFFDE+ASGKSKGYCQVEF+D +AA CKEGMNGY+FNG Sbjct: 240 WWTTDAELESVLSQYGRLKEIKFFDEKASGKSKGYCQVEFYDPSSAAVCKEGMNGYMFNG 299 Query: 1175 RACVVAFASPQTLKQMGAAYQNKTQVQAQSQPQGRRPMNDGIGRGGGMNY-----XXXXX 1011 RACVVAFASPQTLKQMGA+Y NK Q Q+Q+QPQGRRP N+G+GRGG +NY Sbjct: 300 RACVVAFASPQTLKQMGASYMNKNQGQSQAQPQGRRP-NEGLGRGGNLNYQSGDAGRNYG 358 Query: 1010 XXXXXXXXXXXXXXXXXXXXXXXXXXXGAKSMIXXXXXXXXXXXXGIPYGQXXXXXXXXX 831 G K+M+ YGQ Sbjct: 359 RGGWGRGGQGGVNRAGGGGLMRGRGGVGVKNMVGISAGVGNGANGAGAYGQ-GPGPAFGG 417 Query: 830 XXXGMMHPQSMMGAGFDXXXXXXXXXXXXXXXXXXXXXXPSFPTMNTVGLPGVAPHVNPA 651 GMMHPQ MMGAGFD PSFP +NT+GL GVAPHVNPA Sbjct: 418 PAGGMMHPQGMMGAGFDPTYMVRGGGYGGFPGPGFPGMLPSFPAVNTMGLAGVAPHVNPA 477 Query: 650 FFXXXXXXXXXXXXXXXXXXGHHAGMWTDTSVGGGWGGDEHG-RTKEXXXXXXXXXXXXX 474 FF G HAGMWTD S+ GGWGGDEHG RT+E Sbjct: 478 FFGRGMAPNGMGMMGASGMDGPHAGMWTDASM-GGWGGDEHGRRTRESSYGGEDGASEYG 536 Query: 473 XGEATHERGRSNAPSWEKDRGSERDWSGN 387 G+A HE+GRS+ S EK+R SER+WSGN Sbjct: 537 YGDANHEKGRSSGASREKERVSEREWSGN 565 >ref|XP_007044907.1| RNA-binding family protein isoform 4 [Theobroma cacao] gi|508708842|gb|EOY00739.1| RNA-binding family protein isoform 4 [Theobroma cacao] Length = 697 Score = 495 bits (1275), Expect = e-137 Identities = 283/569 (49%), Positives = 342/569 (60%), Gaps = 28/569 (4%) Frame = -1 Query: 2009 MDPMAEEQLDYGDEEYGT-QKMQYQSGGAISALADEDLMGEDDEYDDLYNDVNIGEGFLQ 1833 MD MAEEQ+D+GDEEYG QKMQYQ GAI ALADE++MGEDDEYDDLYNDVN+GEGFLQ Sbjct: 1 MDAMAEEQIDFGDEEYGGGQKMQYQGSGAIPALADEEMMGEDDEYDDLYNDVNVGEGFLQ 60 Query: 1832 LQRSE-PVSLGGVESGGVQTQETDGPGSKAPEHGASQDVNIPGV-VERNDSNIRATVPDQ 1659 LQRSE P+ GG+ S G++ Q + P + E G SQ +NIPGV V+ N+ A P++ Sbjct: 61 LQRSEAPLQPGGLGSTGLKAQRNEAPEPRV-EAGGSQGLNIPGVSVQGKHPNVSARYPEK 119 Query: 1658 AK-----------GGF--------KGSVLEMAREIQVETTGFRDSAPMPPKIGVDPNQIS 1536 + G + KGSV E + QV+ GF+ K+G+DP+ + Sbjct: 120 EEQPAVNRPEMVSGSYPSGSSISQKGSVTEGTHDKQVKNLGFQGLTSASNKVGIDPSGVP 179 Query: 1535 GKFVSGSSPLSDAGTGAPRVATQIPINRPGLNINRPMVNENMSRPVVENGATMLFVGELH 1356 K + + ++GTG P+ +P N+ G N+N P++NEN +P +ENG TMLFVGELH Sbjct: 180 QKIANDPAQSLNSGTGGPQGPPHVPPNQMGTNVNHPVMNENQVQPPIENGPTMLFVGELH 239 Query: 1355 WWTTDAELESVLSQYGRVKEIKFFDERASGKSKGYCQVEFFDAVAAASCKEGMNGYVFNG 1176 WWTTDAELESVLSQYGR+KEIKFFDE+ASGKSKGYCQVEF+D +AA CKEGMNGY+FNG Sbjct: 240 WWTTDAELESVLSQYGRLKEIKFFDEKASGKSKGYCQVEFYDPSSAAVCKEGMNGYMFNG 299 Query: 1175 RACVVAFASPQTLKQMGAAYQNKTQVQAQSQPQGRRPMNDGIGRGGGMNY-----XXXXX 1011 RACVVAFASPQTLKQMGA+Y NK Q Q+Q+QPQGRRP N+G+GRGG +NY Sbjct: 300 RACVVAFASPQTLKQMGASYMNKNQGQSQAQPQGRRP-NEGLGRGGNLNYQSGDAGRNYG 358 Query: 1010 XXXXXXXXXXXXXXXXXXXXXXXXXXXGAKSMIXXXXXXXXXXXXGIPYGQXXXXXXXXX 831 G K+M+ YGQ Sbjct: 359 RGGWGRGGQGGVNRAGGGGLMRGRGGVGVKNMVGISAGVGNGANGAGAYGQ-GPGPAFGG 417 Query: 830 XXXGMMHPQSMMGAGFDXXXXXXXXXXXXXXXXXXXXXXPSFPTMNTVGLPGVAPHVNPA 651 GMMHPQ MMGAGFD PSFP +NT+GL GVAPHVNPA Sbjct: 418 PAGGMMHPQGMMGAGFDPTYMVRGGGYGGFPGPGFPGMLPSFPAVNTMGLAGVAPHVNPA 477 Query: 650 FFXXXXXXXXXXXXXXXXXXGHHAGMWTDTSVGGGWGGDEHG-RTKEXXXXXXXXXXXXX 474 FF G HAGMWTD S+ GGWGGDEHG RT+E Sbjct: 478 FFGRGMAPNGMGMMGASGMDGPHAGMWTDASM-GGWGGDEHGRRTRESSYGGEDGASEYG 536 Query: 473 XGEATHERGRSNAPSWEKDRGSERDWSGN 387 G+A HE+GRS+ S EK+R SER+WSGN Sbjct: 537 YGDANHEKGRSSGASREKERVSEREWSGN 565 >ref|XP_004310003.1| PREDICTED: uncharacterized protein LOC101309507 [Fragaria vesca subsp. vesca] Length = 646 Score = 479 bits (1234), Expect = e-132 Identities = 292/650 (44%), Positives = 353/650 (54%), Gaps = 25/650 (3%) Frame = -1 Query: 2009 MDPMAEEQLDYGDEEYG-TQKMQYQSGGAISALADEDLMGEDDEYDDLYNDVNIGEGFLQ 1833 MDPM EEQ+DY +EEYG QK+QYQ GAI ALADE+ M EDDEYDDLYNDVN+GEGFLQ Sbjct: 1 MDPMGEEQIDYEEEEYGGAQKLQYQESGAIPALADEEPMVEDDEYDDLYNDVNVGEGFLQ 60 Query: 1832 LQRSEP-VSLGGVESGGVQTQETDGPGSKAPEHGASQDVNIPG---------VVERNDSN 1683 + R EP + GV +GG+Q Q+ + P + + GASQ+V PG V E+ D Sbjct: 61 MHRPEPPLPPAGVGNGGLQAQKNNVPEQRV-QGGASQEVKNPGFSVEGKYSSVPEQKDQP 119 Query: 1682 IRATVPDQAKGGFKGSVLEMAREIQVETTGFRDSAPMPPKIGVDPNQISGKFVSGSSPLS 1503 + VP+ A KG V+EM + QV GF+ +A M + D + ++GK +G P Sbjct: 120 PVSVVPEMASQ--KGRVMEMTHDAQVRNMGFQGAATMQSNVVADSSDLTGKIANGPIPSM 177 Query: 1502 DAGTGAPRVATQIPINRPGL--NINRPMVNENMSRPVVENGATMLFVGELHWWTTDAELE 1329 ++G+ P Q+P N+ + N+NRPMVNEN RP VENG+ LFVGELHWWTTDAELE Sbjct: 178 NSGSNGPPAVQQMPANQMNMKINVNRPMVNENQIRPPVENGSATLFVGELHWWTTDAELE 237 Query: 1328 SVLSQYGRVKEIKFFDERASGKSKGYCQVEFFDAVAAASCKEGMNGYVFNGRACVVAFAS 1149 VLSQ+GR+KEIKFFDERASGKSKGYCQV+F+D AA++CKEGM+GYVFNGRACVVAFAS Sbjct: 238 GVLSQFGRIKEIKFFDERASGKSKGYCQVDFYDPAAASACKEGMDGYVFNGRACVVAFAS 297 Query: 1148 PQTLKQMGAAYQNKTQVQAQSQPQGRRPMNDGIGRGGGMNY-------XXXXXXXXXXXX 990 QTLKQMG +Y NK+Q Q Q+QPQGRRPMNDG GRGG MN+ Sbjct: 298 SQTLKQMGDSYVNKSQGQVQTQPQGRRPMNDGAGRGGNMNFQGGDTGRNFGRGNNWGRGG 357 Query: 989 XXXXXXXXXXXXXXXXXXXXGAKSMIXXXXXXXXXXXXGIPYGQXXXXXXXXXXXXGMMH 810 GA++M+ G YGQ GMM+ Sbjct: 358 QGVLNRGPGGGGPGRGRGAMGARNMVGNNAGVGTGANGG-GYGQGLGGPGFGGPVGGMMN 416 Query: 809 PQSMMGAGFDXXXXXXXXXXXXXXXXXXXXXXPSFPTMNTVGLPGVAPHVNPAFFXXXXX 630 MMG GFD P FP +N +GL GVAPHVNPAFF Sbjct: 417 APGMMGPGFDPTYMGRGGGYGGFPGPGFPGMLPQFPGVNAMGLAGVAPHVNPAFFGRGMA 476 Query: 629 XXXXXXXXXXXXXGHHAGMWTDTSVGGGWGGDEHGRTKE-XXXXXXXXXXXXXXGEATHE 453 GHHA MW D S+ G G ++ RT+E GEA HE Sbjct: 477 TNGMGMMGSSGMEGHHAPMWNDPSMAGWTGEEQDRRTRESSYGGDDGGSEYGNYGEANHE 536 Query: 452 RG-RSNAPSWEKDRGSERDWSG---NXXXXXXXXXXXXXXXXXXXXXXXXEADGYRDHRL 285 + RS+A E++R SER+W+G E D YRDHR Sbjct: 537 KPVRSSAAPRERERESEREWTGTSERRHRDEREQDWDRSEREHREPRYKEEKDSYRDHRR 596 Query: 284 XXXXXXXXXXXXXXXXXXXXXXXXSMMQEDDHRSRSRDVDYGKRRRLPSE 135 M EDDHRSRSRDVDYGKRRRLPSE Sbjct: 597 RERDVAYEDDRDRGHSSSRPRSRSKAMPEDDHRSRSRDVDYGKRRRLPSE 646 >gb|EXB82464.1| Cleavage and polyadenylation specificity factor subunit [Morus notabilis] Length = 636 Score = 475 bits (1223), Expect = e-131 Identities = 298/660 (45%), Positives = 348/660 (52%), Gaps = 38/660 (5%) Frame = -1 Query: 2000 MAEEQLDYGDEEYG-TQKMQYQ-SGGAISALADEDLMGEDDEYDDLYNDVNIGEGFLQLQ 1827 MAE+ +D+ DEEYG QK QYQ SGGAISALADE+LMG+DDEYDDLYNDVN+GEGFLQLQ Sbjct: 1 MAEDHIDFEDEEYGGAQKHQYQGSGGAISALADEELMGDDDEYDDLYNDVNVGEGFLQLQ 60 Query: 1826 RSEPVSLGGVES--GGVQTQETDGPGSKAPEHGASQDVNIPGV----------------- 1704 RSE SL G+Q Q+ + P + E G SQ NIPGV Sbjct: 61 RSEAPSLPAAAGVGNGLQAQKRNFPEPRE-EIGGSQQPNIPGVSAEGRFSSAGSQFPGQQ 119 Query: 1703 ----VERNDSNIRATVPDQAKGGFKGSVLEMAREIQVETTGFRDSAPMPPKIGVDPNQIS 1536 V++ PD A G KG ++ GF+ S PM +GVD + I Sbjct: 120 DGLKVDKKSEAGSMVYPDGASGSQKGRIV----------AGFQGSKPMLHSVGVDSSDIP 169 Query: 1535 GKFVSGSSPLSDAGTGAPRVATQIPINRPGLNIN--RPMVNENMSRPVVENGATMLFVGE 1362 GK V+ ++G PR + N+ +N N P+VNEN RP +ENG+TMLFVGE Sbjct: 170 GKMVNEPIQAPNSGGAGPRGILPMQGNQTTVNANVSHPIVNENQIRPSIENGSTMLFVGE 229 Query: 1361 LHWWTTDAELESVLSQYGRVKEIKFFDERASGKSKGYCQVEFFDAVAAASCKEGMNGYVF 1182 LHWWTTDAELESVLSQYGRVKEIKFFDERASGKSKGYCQVE++DA AA +CKEGM+G+VF Sbjct: 230 LHWWTTDAELESVLSQYGRVKEIKFFDERASGKSKGYCQVEYYDAAAAVACKEGMHGHVF 289 Query: 1181 NGRACVVAFASPQTLKQMGAAYQNKTQVQAQSQPQGRRPMNDGIGRGGGMNY-------X 1023 NGRACVVAFASPQTLKQMGAAY +K QVQ QSQPQGRRP+NDG+GRGG N+ Sbjct: 290 NGRACVVAFASPQTLKQMGAAYMSKNQVQNQSQPQGRRPINDGVGRGGNPNFQSGDGGRN 349 Query: 1022 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGAKSMIXXXXXXXXXXXXGIPYGQXXXXX 843 GAK+M+ YGQ Sbjct: 350 FGRGGWGRGGQGAPNRGPGSGGPMRGRGGAMGAKNMVGNNAGVGGGG-----YGQGLAGP 404 Query: 842 XXXXXXXGMMHPQSMMGAGFDXXXXXXXXXXXXXXXXXXXXXXPSFPTMNTVGLPGVAPH 663 GMM+PQ MMG GFD PSFP +NT+G VAPH Sbjct: 405 PFGGPAGGMMNPQGMMGTGFDPTYMGRGVGYGGFAGPAFPGMLPSFPAVNTMGFAAVAPH 464 Query: 662 VNPAFFXXXXXXXXXXXXXXXXXXGHHAGMWTDTSVGGGWGGDEHG-RTKEXXXXXXXXX 486 VNPAFF GH GMW D S+ GGWGG+EHG RT+E Sbjct: 465 VNPAFFGRGMTNNGMGMVGSSLMDGHQGGMWNDPSI-GGWGGEEHGRRTRESSYGGDDGA 523 Query: 485 XXXXXGEATHERGRSNAPSWEKDRGSERDWSGN---XXXXXXXXXXXXXXXXXXXXXXXX 315 G+ HE+G ++RGSERDWSGN Sbjct: 524 SEYGYGDTNHEKG-------GRERGSERDWSGNSERRNHEERDQDWDRSQKEQKEHRYRE 576 Query: 314 EADGYRDHRLXXXXXXXXXXXXXXXXXXXXXXXXSMMQEDDHRSRSRDVDYGKRRRLPSE 135 DG RD+R ++QED HRSRSRDVDYGKRRRLPSE Sbjct: 577 GKDGSRDYRPKERELDYEDDWDRGQSSSRLRSRSRVVQEDHHRSRSRDVDYGKRRRLPSE 636 >ref|XP_002515040.1| RNA binding protein, putative [Ricinus communis] gi|223546091|gb|EEF47594.1| RNA binding protein, putative [Ricinus communis] Length = 644 Score = 472 bits (1215), Expect = e-130 Identities = 297/652 (45%), Positives = 354/652 (54%), Gaps = 30/652 (4%) Frame = -1 Query: 2000 MAEEQLDYGDEEYG-TQKMQYQSGGAISALADEDLMGEDDEYDDLYNDVNIGEGFLQLQR 1824 MA+EQ+DY DEEYG QK+QYQ GAI ALA+E+ MGEDDEYDDLYNDVNIGE FLQ+ R Sbjct: 1 MADEQIDYEDEEYGGAQKLQYQGSGAIPALAEEE-MGEDDEYDDLYNDVNIGENFLQMHR 59 Query: 1823 SE-PVSLGGVESGGVQTQETDGPGSKAPEHGASQDVNIPGVVERNDSNIRATVPDQ-AKG 1650 SE P + V +GG Q + ++ E G SQ +NIPGV + + P+Q KG Sbjct: 60 SEAPPAPPSVGNGGFQPRNSN---DLRVESGGSQGLNIPGVAVESKYSTGTHFPEQNVKG 116 Query: 1649 GFKGSV--------------LEMAREIQVETTGFRDSAPMPPKIGVDPNQISGKFVSGSS 1512 GSV +EM + Q GF+ S P IGVDP+ ++ K + + Sbjct: 117 PEIGSVGYPDGSSIAQKTRVMEMTNDSQARNMGFQGSTSGPSNIGVDPSDMNNKISNDPT 176 Query: 1511 PLSDAGTGAPRVATQIPINRPGLNI--NRPMVNENMSRPVVENGATMLFVGELHWWTTDA 1338 P+ +AG PRV Q+P ++ +N+ NR NEN RP +ENG+TML+VGELHWWTTDA Sbjct: 177 PVPNAGV--PRVIPQLPASQMNMNMDTNRSATNENQIRPPLENGSTMLYVGELHWWTTDA 234 Query: 1337 ELESVLSQYGRVKEIKFFDERASGKSKGYCQVEFFDAVAAASCKEGMNGYVFNGRACVVA 1158 ELE+VLSQYG VKEIKFFDERASGKSKGYCQVEF+DA AAA+CKEGMNG++FNGRACVVA Sbjct: 235 ELENVLSQYGMVKEIKFFDERASGKSKGYCQVEFYDAAAAAACKEGMNGHLFNGRACVVA 294 Query: 1157 FASPQTLKQMGAAYQNKTQVQAQSQPQGRRPMNDGIGRGGGMNY-------XXXXXXXXX 999 FAS QTLKQMGA+Y NK Q Q QSQ QGRRPMNDG GRGG MNY Sbjct: 295 FASQQTLKQMGASYMNKNQGQPQSQNQGRRPMNDGAGRGGNMNYQGGDAGRNFGRGGWGR 354 Query: 998 XXXXXXXXXXXXXXXXXXXXXXXGAKSMIXXXXXXXXXXXXGIPYGQXXXXXXXXXXXXG 819 GAK+++ G YGQ Sbjct: 355 GGQGILNRGPGGGGRMGGRGGSMGAKNIVGGAGGVGSGANGG-GYGQGLAGPAFGGPAGA 413 Query: 818 MMHPQSMMGAGFDXXXXXXXXXXXXXXXXXXXXXXPSFPTMNTVGLPGVAPHVNPAFFXX 639 M+ PQSMM AGFD PSFP +N +GL GVAPHVNPAFF Sbjct: 414 MLPPQSMMRAGFDPTYMGRGAGYGGFAGPGFPGMLPSFPAVNAMGLAGVAPHVNPAFFGR 473 Query: 638 XXXXXXXXXXXXXXXXGHHAGMWTDTSVGGGWGGDEHGRTKEXXXXXXXXXXXXXXGEAT 459 G +AGMW+DTS+ GGWG + RT+E GE Sbjct: 474 GMAPNGMGMMGPSGMDGPNAGMWSDTSM-GGWGEEPGRRTRESSYGGDDGASEYGYGEVN 532 Query: 458 HERG-RSNAPSWEKDRGSERDWSGN---XXXXXXXXXXXXXXXXXXXXXXXXEADGYRDH 291 HE+G RS+A S EK+R SERDWSGN E + YRDH Sbjct: 533 HEKGARSSAASREKERASERDWSGNSDRRHRDDREHDWDRSEREHKEHRYREEKESYRDH 592 Query: 290 RLXXXXXXXXXXXXXXXXXXXXXXXXSMMQEDDHRSRSRDVDYGKRRRLPSE 135 R + E+D+RSRSRD DYGKRRRLPSE Sbjct: 593 RQRERDSGYEDDWDRGQSSSRSRSRSRAVPEEDYRSRSRDADYGKRRRLPSE 644 >ref|XP_002312652.1| RNA recognition motif-containing family protein [Populus trichocarpa] gi|222852472|gb|EEE90019.1| RNA recognition motif-containing family protein [Populus trichocarpa] Length = 619 Score = 440 bits (1132), Expect = e-120 Identities = 282/645 (43%), Positives = 337/645 (52%), Gaps = 28/645 (4%) Frame = -1 Query: 1985 LDYGDEEYGTQKMQYQSGGAISALADEDLMGEDDEYDDLYNDVNIGEGFLQLQRSE-PVS 1809 +DY +EE KMQYQ GAI ALA+E+ MGEDDEYDDLYNDVN+GE FLQ+ SE P Sbjct: 1 MDYEEEE----KMQYQGSGAIPALAEEE-MGEDDEYDDLYNDVNVGENFLQMHGSEAPAP 55 Query: 1808 LGGVESGGVQTQETDGPGSKAPEHGASQDVNIPG---VVERNDSNIRATVPDQAKGGF-- 1644 V +GG QT+ E G SQ + I G VE SN +A P+Q + Sbjct: 56 PATVGNGGFQTRNAH---ESRIETGGSQALAITGGGPAVEGIYSNAKAHFPEQKQVAVAV 112 Query: 1643 ---------------KGSVLEMAREIQVETTGFRDSAPMPPKIGVDPNQISGKFVSGSSP 1509 KG V+EM+ ++QV GF+ S P+PP IGVDP+ +S K P Sbjct: 113 EAQDVGPVDGSSVAQKGRVIEMSHDVQVRNMGFQKSTPVPPGIGVDPSDMSRKNAIEPEP 172 Query: 1508 LSDAGTGAPRVATQIPINRPGLN--INRPMVNENMSRPVVENGATMLFVGELHWWTTDAE 1335 L G+ PR A Q+ +N+ ++ +NRP+VNEN RP +ENG+T L+VGELHWWTTDAE Sbjct: 173 LPITGSAGPRGAPQMQVNQMHMSADVNRPVVNENQVRPPIENGSTTLYVGELHWWTTDAE 232 Query: 1334 LESVLSQYGRVKEIKFFDERASGKSKGYCQVEFFDAVAAASCKEGMNGYVFNGRACVVAF 1155 LES SQ+GRVKEIKFFDERASGKSKGYCQV+F++A AAA+CKEGMNG+VFNGR CVVAF Sbjct: 233 LESFASQFGRVKEIKFFDERASGKSKGYCQVDFYEAAAAAACKEGMNGHVFNGRPCVVAF 292 Query: 1154 ASPQTLKQMGAAYQNKTQVQAQSQPQGRRPMNDGIGRGGGMNYXXXXXXXXXXXXXXXXX 975 ASPQTLKQMGA+Y NKTQ Q Q+Q QGR MNDG GRGG N+ Sbjct: 293 ASPQTLKQMGASYMNKTQGQPQTQSQGRGSMNDGAGRGGNANFQSGDGGRNYGRGAWGRG 352 Query: 974 XXXXXXXXXXXXXXXGAKSM----IXXXXXXXXXXXXGIPYGQXXXXXXXXXXXXGMMHP 807 G +M + G YGQ GMM P Sbjct: 353 GQGILNRGPGGGPMRGRGAMGPKNMAGNVAGVGSGANGGGYGQGLAGPAFGGPAGGMMPP 412 Query: 806 QSMMGAGFDXXXXXXXXXXXXXXXXXXXXXXPSFPTMNTVGLPGVAPHVNPAFFXXXXXX 627 Q MMGAGFD PSFP +N++GL GVAPHVNPAFF Sbjct: 413 QGMMGAGFDPLYMGRGGGYGGFAGPGFPGMLPSFPAVNSMGLAGVAPHVNPAFFARGMAP 472 Query: 626 XXXXXXXXXXXXGHHAGMWTDTSVGGGWGGDEHGRTKEXXXXXXXXXXXXXXGEATHERG 447 G + GMW ++S G G E+G GE HE+G Sbjct: 473 NGMGMMVSSGMDGPNPGMW-ESSYDGDEGASEYG-----------------YGEGNHEKG 514 Query: 446 -RSNAPSWEKDRGSERDWSGNXXXXXXXXXXXXXXXXXXXXXXXXEADGYRDHRLXXXXX 270 RS+ S EK+RGSERDWSGN E D YR HR Sbjct: 515 ARSSGASREKERGSERDWSGNSDRRHRDEREQDWDRPEREHRYKEEKDSYRGHRQRERDS 574 Query: 269 XXXXXXXXXXXXXXXXXXXSMMQEDDHRSRSRDVDYGKRRRLPSE 135 E+D+RSR+RDVDYGKRRRLPSE Sbjct: 575 GYEDDRDRGHSSSRARSRSRAAPEEDYRSRTRDVDYGKRRRLPSE 619 >ref|XP_007016781.1| 3'-5'-exoribonuclease family protein isoform 1 [Theobroma cacao] gi|508787144|gb|EOY34400.1| 3'-5'-exoribonuclease family protein isoform 1 [Theobroma cacao] Length = 256 Score = 381 bits (979), Expect = e-102 Identities = 192/239 (80%), Positives = 209/239 (87%), Gaps = 3/239 (1%) Frame = +3 Query: 2604 QKTRT-IFK--DVDWVRPDGRGFHQCRPAFLRTGAVNAASGSAYAEFGNTKVIVSVFGPR 2774 QKTR IFK D+DWVRPDGRGFHQCRPAF RTGAVN+ASGSAYAEFGNTKVIVSVFGPR Sbjct: 18 QKTRPPIFKGNDLDWVRPDGRGFHQCRPAFFRTGAVNSASGSAYAEFGNTKVIVSVFGPR 77 Query: 2775 ESKKAMMYSDIGRLNCNVSYTTFASPVRGQGSDHKEFSAMLHKALEGAIILESFPKTTVD 2954 ESKKAMMYSDIGRLNCNVSYTTFA+PVRGQGSDHKEFS+MLHKALEGAI+LE+FPKTTVD Sbjct: 78 ESKKAMMYSDIGRLNCNVSYTTFATPVRGQGSDHKEFSSMLHKALEGAIMLETFPKTTVD 137 Query: 2955 VFALVLESGGSDLSVVIACASLALADAGIMMFDXXXXXXXXXXXXXXXIDPMTDEESYQD 3134 VFALVLESGGSDL VVI+CASLALADAGIMM+D IDP+ +EESYQD Sbjct: 138 VFALVLESGGSDLPVVISCASLALADAGIMMYDLVAAVSVSCLGKNLVIDPILEEESYQD 197 Query: 3135 GSLMITSMPSHNEITQLTLTGEWSTPKIHEAMELCLDACSKLGKIMRSCLKESASASQQ 3311 GSLM+T MPS E+TQL TGEWSTP I+EAM+LCLDAC KLGK+MRSCLKE+ SASQ+ Sbjct: 198 GSLMLTCMPSRYEVTQLIFTGEWSTPDINEAMQLCLDACGKLGKVMRSCLKEATSASQE 256 >ref|XP_002285257.1| PREDICTED: exosome complex component MTR3 [Vitis vinifera] gi|147834996|emb|CAN61380.1| hypothetical protein VITISV_037546 [Vitis vinifera] gi|297746275|emb|CBI16331.3| unnamed protein product [Vitis vinifera] Length = 254 Score = 375 bits (964), Expect = e-101 Identities = 183/230 (79%), Positives = 203/230 (88%) Frame = +3 Query: 2613 RTIFKDVDWVRPDGRGFHQCRPAFLRTGAVNAASGSAYAEFGNTKVIVSVFGPRESKKAM 2792 R IF+DVDWVRPDGRGFHQCRPAFL+TGAVNAASGSAYAEFGNTKVIVSVFGPRESKKAM Sbjct: 22 RPIFQDVDWVRPDGRGFHQCRPAFLKTGAVNAASGSAYAEFGNTKVIVSVFGPRESKKAM 81 Query: 2793 MYSDIGRLNCNVSYTTFASPVRGQGSDHKEFSAMLHKALEGAIILESFPKTTVDVFALVL 2972 YS GRLNCNVSYTTFA P+RGQGSDHK +S+MLHKALEGAII+ESFPKTTVDVFALVL Sbjct: 82 AYSGTGRLNCNVSYTTFAMPIRGQGSDHKGYSSMLHKALEGAIIVESFPKTTVDVFALVL 141 Query: 2973 ESGGSDLSVVIACASLALADAGIMMFDXXXXXXXXXXXXXXXIDPMTDEESYQDGSLMIT 3152 ESGGSDL VVI+CASLALADAGIMM+D IDP+ +EESYQDGSL+IT Sbjct: 142 ESGGSDLPVVISCASLALADAGIMMYDLVASVSVSCLGKNLVIDPILEEESYQDGSLLIT 201 Query: 3153 SMPSHNEITQLTLTGEWSTPKIHEAMELCLDACSKLGKIMRSCLKESASA 3302 MPS NE+TQLT+ GEWSTP++HEAM++CL+ACSKL KI+RSCLKE+ASA Sbjct: 202 CMPSRNEVTQLTVNGEWSTPRVHEAMQICLEACSKLAKIIRSCLKETASA 251 >gb|EXB38678.1| Exosome complex component [Morus notabilis] Length = 257 Score = 369 bits (946), Expect = 8e-99 Identities = 184/238 (77%), Positives = 207/238 (86%), Gaps = 3/238 (1%) Frame = +3 Query: 2604 QKTRTIF---KDVDWVRPDGRGFHQCRPAFLRTGAVNAASGSAYAEFGNTKVIVSVFGPR 2774 QKT+ F +VDWVRPDGRGFHQCRPAF RTGAVNAA+GSAYAEFGNTKVIVSVFGPR Sbjct: 19 QKTKPSFFKNDNVDWVRPDGRGFHQCRPAFFRTGAVNAAAGSAYAEFGNTKVIVSVFGPR 78 Query: 2775 ESKKAMMYSDIGRLNCNVSYTTFASPVRGQGSDHKEFSAMLHKALEGAIILESFPKTTVD 2954 ESKKAMMYSDIGRLNCNV++TTFA+PVRGQGSD K+FS+MLHKALEGAI+LE+FPKTTVD Sbjct: 79 ESKKAMMYSDIGRLNCNVTFTTFATPVRGQGSDDKDFSSMLHKALEGAIMLETFPKTTVD 138 Query: 2955 VFALVLESGGSDLSVVIACASLALADAGIMMFDXXXXXXXXXXXXXXXIDPMTDEESYQD 3134 VFALVLESGGSDL VVI+CAS+ALADAGIMM+D IDP+ +EESYQD Sbjct: 139 VFALVLESGGSDLPVVISCASVALADAGIMMYDLVTSVSVSCLGKNLVIDPVLEEESYQD 198 Query: 3135 GSLMITSMPSHNEITQLTLTGEWSTPKIHEAMELCLDACSKLGKIMRSCLKESASASQ 3308 GSLM++ MPS E+TQLT+TGEWST KI+E M+LCLDACSKL KIMRSCLKE+ASAS+ Sbjct: 199 GSLMLSCMPSKYEVTQLTITGEWSTAKINEGMQLCLDACSKLAKIMRSCLKEAASASE 256 >ref|XP_006424544.1| hypothetical protein CICLE_v10029091mg [Citrus clementina] gi|557526478|gb|ESR37784.1| hypothetical protein CICLE_v10029091mg [Citrus clementina] Length = 260 Score = 367 bits (941), Expect = 3e-98 Identities = 180/228 (78%), Positives = 200/228 (87%) Frame = +3 Query: 2628 DVDWVRPDGRGFHQCRPAFLRTGAVNAASGSAYAEFGNTKVIVSVFGPRESKKAMMYSDI 2807 DVDW+RPD RGFHQCRPAF RTGAVN+ASGSAYAEFGNTKVIVSVFGPRESKKAMMYS+I Sbjct: 33 DVDWLRPDSRGFHQCRPAFFRTGAVNSASGSAYAEFGNTKVIVSVFGPRESKKAMMYSNI 92 Query: 2808 GRLNCNVSYTTFASPVRGQGSDHKEFSAMLHKALEGAIILESFPKTTVDVFALVLESGGS 2987 GRLNCNVSYTTFA+P+RGQGSDHK+FS+MLHKALEGAIILE+FPKTTVDVFALVLESGGS Sbjct: 93 GRLNCNVSYTTFATPIRGQGSDHKDFSSMLHKALEGAIILETFPKTTVDVFALVLESGGS 152 Query: 2988 DLSVVIACASLALADAGIMMFDXXXXXXXXXXXXXXXIDPMTDEESYQDGSLMITSMPSH 3167 DL VVI+CAS+ALADAGIMM+D IDP+ +EESYQDGSLMI MPS Sbjct: 153 DLPVVISCASVALADAGIMMYDLVASVSVSCLGKNLLIDPVLEEESYQDGSLMIACMPSR 212 Query: 3168 NEITQLTLTGEWSTPKIHEAMELCLDACSKLGKIMRSCLKESASASQQ 3311 E+TQLT+TGEWSTP +EAM+LCLDA +KLGKIMRSCLKE+AS Q+ Sbjct: 213 YEVTQLTVTGEWSTPHFNEAMQLCLDASAKLGKIMRSCLKEAASDEQE 260