BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Akebia27_contig00006355
         (3800 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002282072.2| PREDICTED: uncharacterized protein LOC100268...   556   e-155
ref|XP_007044902.1| RNA-binding family protein isoform 1 [Theobr...   539   e-150
ref|XP_007225677.1| hypothetical protein PRUPE_ppa002814mg [Prun...   524   e-145
ref|XP_007044904.1| RNA-binding family protein isoform 1 [Theobr...   524   e-145
ref|XP_006438179.1| hypothetical protein CICLE_v10030915mg [Citr...   515   e-143
ref|XP_006483997.1| PREDICTED: cleavage and polyadenylation spec...   511   e-142
ref|XP_007044908.1| RNA-binding family protein isoform 5, partia...   505   e-140
ref|XP_006483998.1| PREDICTED: cleavage and polyadenylation spec...   499   e-138
ref|XP_006438180.1| hypothetical protein CICLE_v10030917mg [Citr...   498   e-138
ref|XP_006341786.1| PREDICTED: cleavage and polyadenylation spec...   495   e-137
ref|XP_007044909.1| RNA-binding family protein isoform 6 [Theobr...   495   e-137
ref|XP_007044907.1| RNA-binding family protein isoform 4 [Theobr...   495   e-137
ref|XP_004310003.1| PREDICTED: uncharacterized protein LOC101309...   479   e-132
gb|EXB82464.1| Cleavage and polyadenylation specificity factor s...   475   e-131
ref|XP_002515040.1| RNA binding protein, putative [Ricinus commu...   472   e-130
ref|XP_002312652.1| RNA recognition motif-containing family prot...   440   e-120
ref|XP_007016781.1| 3'-5'-exoribonuclease family protein isoform...   381   e-102
ref|XP_002285257.1| PREDICTED: exosome complex component MTR3 [V...   375   e-101
gb|EXB38678.1| Exosome complex component [Morus notabilis]            369   8e-99
ref|XP_006424544.1| hypothetical protein CICLE_v10029091mg [Citr...   367   3e-98

>ref|XP_002282072.2| PREDICTED: uncharacterized protein LOC100268141 isoform 1 [Vitis
            vinifera] gi|359473133|ref|XP_003631251.1| PREDICTED:
            uncharacterized protein LOC100268141 isoform 2 [Vitis
            vinifera]
          Length = 647

 Score =  556 bits (1434), Expect = e-155
 Identities = 328/654 (50%), Positives = 376/654 (57%), Gaps = 32/654 (4%)
 Frame = -1

Query: 2000 MAEEQLDYGDEEYG-TQKMQYQSGGAISALADEDLMGEDDEYDDLYNDVNIGEGFLQLQR 1824
            MAEEQLDY DEEYG  QKM +Q GGAISALAD++LMGEDDEYDDLYNDVN+GEGFLQ+ R
Sbjct: 1    MAEEQLDYEDEEYGGAQKMPFQGGGAISALADDELMGEDDEYDDLYNDVNVGEGFLQMHR 60

Query: 1823 SEPVSLGGVESGG-VQTQETDGPGSKAPEHGASQDVNIPGVV-----------ERNDSNI 1680
            SE  +  GV +GG  Q  +TD P  K  E G SQ + IPGV            E+ +  +
Sbjct: 61   SEAPAPSGVMAGGPFQAHKTDVPPQKL-EAGTSQGLIIPGVSIEGKYSNPHFHEKKEGPM 119

Query: 1679 RATVPDQAKGGF--------KGSVLEMAREIQVETTGFRDSAPMPPKIGVDPNQISGKFV 1524
                P+              KG VLEM  + QV   GF+ S P+P K G +P+ + GK  
Sbjct: 120  AVKGPEMGSTSHLDGPSVSQKGRVLEMTHDTQVRNLGFQGSTPIPQKTGAEPSDVHGKIA 179

Query: 1523 SGSSPLSDAGTGAPRVATQIPINRPGLNIN--RPMVNENMSRPVVENGATMLFVGELHWW 1350
            + S+P+ ++GTG PR   Q+  N+ G+N+N  RPMVNEN  RP V+NGATMLFVGELHWW
Sbjct: 180  NESTPVLNSGTGGPRAVPQMLSNQMGMNVNVNRPMVNENQIRPAVDNGATMLFVGELHWW 239

Query: 1349 TTDAELESVLSQYGRVKEIKFFDERASGKSKGYCQVEFFDAVAAASCKEGMNGYVFNGRA 1170
            TTDAELESVLSQYGRVKEIKFFDERASGKSKGYCQVEF+DA AAA+CKEGMNGY+FNGRA
Sbjct: 240  TTDAELESVLSQYGRVKEIKFFDERASGKSKGYCQVEFYDASAAAACKEGMNGYIFNGRA 299

Query: 1169 CVVAFASPQTLKQMGAAYQNKTQVQAQSQPQGRRPMNDGIGRGGGMNY-------XXXXX 1011
            CVVAFASPQTLKQMGA+Y NKT  QAQSQ QGRRPMNDG+GRGGGMN             
Sbjct: 300  CVVAFASPQTLKQMGASYMNKT--QAQSQSQGRRPMNDGVGRGGGMNMQGGDAGRNYGRG 357

Query: 1010 XXXXXXXXXXXXXXXXXXXXXXXXXXXGAKSMIXXXXXXXXXXXXGIPYGQXXXXXXXXX 831
                                       GAK+M+               YGQ         
Sbjct: 358  GWGRGGQGILNRGPGGGGPMRGRGGAVGAKNMVGNTAGVGASGGG---YGQGLAGPTFGG 414

Query: 830  XXXGMMHPQSMMGAGFDXXXXXXXXXXXXXXXXXXXXXXPSFPTMNTVGLPGVAPHVNPA 651
               G+MHPQ MMG+GFD                      PSFP +NT+GL GVAPHVNPA
Sbjct: 415  PAGGLMHPQGMMGSGFDPTYMGRGGAYGGFSGSAFPGMVPSFPAVNTMGLAGVAPHVNPA 474

Query: 650  FFXXXXXXXXXXXXXXXXXXGHHAGMWTDTSVGGGWGGDEHG-RTKEXXXXXXXXXXXXX 474
            FF                  GHHAGMWTDTS+ GGWGG+EHG RT+E             
Sbjct: 475  FFGRGMAANGMGMMGATGMDGHHAGMWTDTSM-GGWGGEEHGRRTRESSYGGDDGASDYG 533

Query: 473  XGEATHER-GRSNAPSWEKDRGSERDWSGNXXXXXXXXXXXXXXXXXXXXXXXXEADGYR 297
             GE  HE+ GRSN  S EK+RGSERDWSGN                        E DGYR
Sbjct: 534  YGEVNHEKVGRSNTASREKERGSERDWSGNSERRHRDEREQDWERSDKDHRYREEKDGYR 593

Query: 296  DHRLXXXXXXXXXXXXXXXXXXXXXXXXSMMQEDDHRSRSRDVDYGKRRRLPSE 135
            DHR                           + ++DHRSRSRD DYGKRRRLPSE
Sbjct: 594  DHRQRERDFNNEDDWDRGQSSSRSRSRSRAVADEDHRSRSRDGDYGKRRRLPSE 647


>ref|XP_007044902.1| RNA-binding family protein isoform 1 [Theobroma cacao]
            gi|590695488|ref|XP_007044903.1| RNA-binding family
            protein isoform 1 [Theobroma cacao]
            gi|508708837|gb|EOY00734.1| RNA-binding family protein
            isoform 1 [Theobroma cacao] gi|508708838|gb|EOY00735.1|
            RNA-binding family protein isoform 1 [Theobroma cacao]
          Length = 653

 Score =  539 bits (1389), Expect = e-150
 Identities = 316/656 (48%), Positives = 375/656 (57%), Gaps = 31/656 (4%)
 Frame = -1

Query: 2009 MDPMAEEQLDYGDEEYG-TQKMQYQSGGAISALADEDLMGEDDEYDDLYNDVNIGEGFLQ 1833
            MD MAEEQ+D+GDEEYG  QKMQYQ  GAI ALADE++MGEDDEYDDLYNDVN+GEGFLQ
Sbjct: 1    MDAMAEEQIDFGDEEYGGAQKMQYQGSGAIPALADEEMMGEDDEYDDLYNDVNVGEGFLQ 60

Query: 1832 LQRSE-PVSLGGVESGGVQTQETDGPGSKAPEHGASQDVNIPGV-VERNDSNIRATVPDQ 1659
            LQRSE P   GG+ S G+Q Q+ + P  +  E G SQ +NIPGV V+    N+ A  P+Q
Sbjct: 61   LQRSEAPPQPGGMGSTGLQAQKNEAPEPRG-EAGGSQGLNIPGVSVQGKHLNVTARYPEQ 119

Query: 1658 -----------AKGGF--------KGSVLEMAREIQVETTGFRDSAPMPPKIGVDPNQIS 1536
                         G +        KG V+E  ++ QV+  GF+  +    K+G+DP+ + 
Sbjct: 120  DGQPAVSRPEMGSGSYPSGTSISQKGRVMEGTQDTQVKNMGFQGLSSASHKVGIDPSGVP 179

Query: 1535 GKFVSGSSPLSDAGTGAPRVATQIPINRPGLNINRPMVNENMSRPVVENGATMLFVGELH 1356
             K  +  +   ++GTG P+ A  +P N+ GLN+N PM++EN  RP +ENG TMLFVGELH
Sbjct: 180  QKIANVPAQSLNSGTGGPQGAPHVPPNQMGLNVNHPMISENQVRPPIENGPTMLFVGELH 239

Query: 1355 WWTTDAELESVLSQYGRVKEIKFFDERASGKSKGYCQVEFFDAVAAASCKEGMNGYVFNG 1176
            WWTTDAELESVLSQYGRVKEIKFFDERASGKSKGYCQVEF+D  +AA+CKEGM+GY+FNG
Sbjct: 240  WWTTDAELESVLSQYGRVKEIKFFDERASGKSKGYCQVEFYDPASAAACKEGMDGYMFNG 299

Query: 1175 RACVVAFASPQTLKQMGAAYQNKTQVQAQSQPQGRRPMNDGIGRGGGMNY-----XXXXX 1011
            RACVVAFASPQTLKQMGA+Y NK Q Q+Q+QPQGRRP NDG+GRGG MNY          
Sbjct: 300  RACVVAFASPQTLKQMGASYMNKNQGQSQAQPQGRRP-NDGLGRGGNMNYQSGDAGRNYG 358

Query: 1010 XXXXXXXXXXXXXXXXXXXXXXXXXXXGAKSMIXXXXXXXXXXXXGIPYGQXXXXXXXXX 831
                                       G K+M+            G  YGQ         
Sbjct: 359  RGGWGRGGQGVVNRSGVGGPMRGRGGVGVKNMVGSSAGVGNGANGGAAYGQGPAGPPFGG 418

Query: 830  XXXGMMHPQSMMGAGFDXXXXXXXXXXXXXXXXXXXXXXPSFPTMNTVGLPGVAPHVNPA 651
               GMMHPQ MMGAGFD                      PSFP +NT+GL GVAPHVNPA
Sbjct: 419  PAGGMMHPQGMMGAGFDPTYMGRGGSYGGFPGPGFPGMLPSFPAVNTLGLAGVAPHVNPA 478

Query: 650  FFXXXXXXXXXXXXXXXXXXGHHAGMWTDTSVGGGWGGDEHG-RTKEXXXXXXXXXXXXX 474
            FF                  G H GMWTDTS+ GGWGGDEHG RT+E             
Sbjct: 479  FFGRGMAPNGMGMMGGPGMDGPHVGMWTDTSM-GGWGGDEHGRRTRESSYGGEDGASEYG 537

Query: 473  XGEATHERGRSNAPSWEKDRGSERDWSGN---XXXXXXXXXXXXXXXXXXXXXXXXEADG 303
             G+A HE+GRS+  S EK+R S+R+WSGN                           E D 
Sbjct: 538  YGDANHEKGRSSGASREKERVSDREWSGNSDRRHRDEKERDWDRSEREHREHRYREEKDS 597

Query: 302  YRDHRLXXXXXXXXXXXXXXXXXXXXXXXXSMMQEDDHRSRSRDVDYGKRRRLPSE 135
            YR+HR                           M E+  RSRSRDVDYGKRRRLPSE
Sbjct: 598  YREHRHRERDLDYDDDLDRGQSSSRSRRRSHAMPEEQRRSRSRDVDYGKRRRLPSE 653


>ref|XP_007225677.1| hypothetical protein PRUPE_ppa002814mg [Prunus persica]
            gi|462422613|gb|EMJ26876.1| hypothetical protein
            PRUPE_ppa002814mg [Prunus persica]
          Length = 630

 Score =  524 bits (1350), Expect = e-145
 Identities = 319/641 (49%), Positives = 368/641 (57%), Gaps = 19/641 (2%)
 Frame = -1

Query: 2000 MAEEQLDYGDEEYG-TQKMQYQSGGAISALADEDLMGEDDEYDDLYNDVNIGEGFLQLQR 1824
            MAEEQ+DY DEEYG  QK+QYQ  GAISALADE+ M EDDEYDDLYNDVN+ EGFLQ+ R
Sbjct: 1    MAEEQIDYEDEEYGGAQKLQYQGSGAISALADEEPMVEDDEYDDLYNDVNVREGFLQMHR 60

Query: 1823 SE-PVSLGGVESGGVQTQETDGPGSKAPEHGASQDVNIPGV-VERNDSNIRATVPDQAKG 1650
            SE P+  GGV +GG+Q Q+TD   ++  + G SQ+  IPGV V+   S+  A  P+Q   
Sbjct: 61   SEAPLPPGGVGNGGLQAQKTDVTETRV-QAGVSQESKIPGVSVQGKYSSAVAQFPEQQ-- 117

Query: 1649 GFKGSVLEMAREIQVETTGFRDSAPMPPKIGVDPNQISGKFVSGSSPLSDAGTGAPRVAT 1470
                    +A+E ++ +TG+  S  MPP +G D + I+GK    S P  ++GT  P   T
Sbjct: 118  ----GQPPVAKEPELGSTGY-GSTTMPPNVGGDSSDITGKTALESVPSMNSGTAGPTGVT 172

Query: 1469 QIPINRPGL--NINRPMVNENMSRPVVENGATMLFVGELHWWTTDAELESVLSQYGRVKE 1296
            Q+P N+  +  N NRPM NEN  RP VENG+TMLFVGELHWWTTDAELESVLSQYGRVKE
Sbjct: 173  QMPTNQISIKVNANRPMFNENQIRPPVENGSTMLFVGELHWWTTDAELESVLSQYGRVKE 232

Query: 1295 IKFFDERASGKSKGYCQVEFFDAVAAASCKEGMNGYVFNGRACVVAFASPQTLKQMGAAY 1116
            IKFFDERASGKSKGYCQVEF D  AA +CKEGM+GY+FNGRACVVAFASPQTLKQMGA+Y
Sbjct: 233  IKFFDERASGKSKGYCQVEFHDPAAATACKEGMDGYLFNGRACVVAFASPQTLKQMGASY 292

Query: 1115 QNKTQVQAQSQPQGRRPMNDGIGRGGGMNY--------XXXXXXXXXXXXXXXXXXXXXX 960
             +K+Q Q QSQ  GRRPMN+G+GRGGG+NY                              
Sbjct: 293  LSKSQGQTQSQQPGRRPMNEGVGRGGGVNYQTGDTGGRNFGRGGWGRGGQGVANRGPGGG 352

Query: 959  XXXXXXXXXXGAKSMIXXXXXXXXXXXXGIPYGQXXXXXXXXXXXXGMMHPQSMMGAGFD 780
                      GAK+M             G  YGQ            GMM+PQ MMGAGFD
Sbjct: 353  GPMRGRGGAMGAKNMAGNPAGVGTGANGG--YGQGLAGPGFGGPVGGMMNPQGMMGAGFD 410

Query: 779  XXXXXXXXXXXXXXXXXXXXXXPSFPTMNTVGLPGVAPHVNPAFFXXXXXXXXXXXXXXX 600
                                   SFP +NT+GL GVAPHVNPAFF               
Sbjct: 411  PTYMGRGGGYGGFPGPAFPGMLSSFPAVNTMGLAGVAPHVNPAFFGRGMATNGMGMMGSS 470

Query: 599  XXXGHHAGMWTDTSVGGGWGGDEHG-RTKEXXXXXXXXXXXXXXGEATHER-GRSNAPSW 426
               GHHAGMW D S+ GGWGGDEHG RT+E              GEA HE+ GRSNAPS 
Sbjct: 471  GMDGHHAGMWNDPSM-GGWGGDEHGRRTRESSYGGDDGASEYGYGEANHEKGGRSNAPSR 529

Query: 425  EKDRGSERDWSGN----XXXXXXXXXXXXXXXXXXXXXXXXEADGYRDHRLXXXXXXXXX 258
            E++RGSERDWSGN                            E D YRDHR          
Sbjct: 530  ERERGSERDWSGNSERRHRDEREQDWDRSERGEHREHRYKEEKDSYRDHRQRERDVGYED 589

Query: 257  XXXXXXXXXXXXXXXSMMQEDDHRSRSRDVDYGKRRRLPSE 135
                             M EDDHRSRSRDVDYGKRRRLPSE
Sbjct: 590  DWDRGQSSSRPRSRSKAMPEDDHRSRSRDVDYGKRRRLPSE 630


>ref|XP_007044904.1| RNA-binding family protein isoform 1 [Theobroma cacao]
            gi|590695496|ref|XP_007044905.1| RNA-binding family
            protein isoform 1 [Theobroma cacao]
            gi|590695500|ref|XP_007044906.1| RNA-binding family
            protein isoform 1 [Theobroma cacao]
            gi|508708839|gb|EOY00736.1| RNA-binding family protein
            isoform 1 [Theobroma cacao] gi|508708840|gb|EOY00737.1|
            RNA-binding family protein isoform 1 [Theobroma cacao]
            gi|508708841|gb|EOY00738.1| RNA-binding family protein
            isoform 1 [Theobroma cacao]
          Length = 652

 Score =  524 bits (1349), Expect = e-145
 Identities = 309/656 (47%), Positives = 372/656 (56%), Gaps = 31/656 (4%)
 Frame = -1

Query: 2009 MDPMAEEQLDYGDEEYGT-QKMQYQSGGAISALADEDLMGEDDEYDDLYNDVNIGEGFLQ 1833
            MD MAEEQ+D+GDEEYG  QKMQYQ  GAI ALADE++MGEDDEYDDLYNDVN+GEGFLQ
Sbjct: 1    MDAMAEEQIDFGDEEYGGGQKMQYQGSGAIPALADEEMMGEDDEYDDLYNDVNVGEGFLQ 60

Query: 1832 LQRSE-PVSLGGVESGGVQTQETDGPGSKAPEHGASQDVNIPGV-VERNDSNIRATVPDQ 1659
            LQRSE P+  GG+ S G++ Q  + P  +  E G SQ +NIPGV V+    N+ A  P++
Sbjct: 61   LQRSEAPLQPGGLGSTGLKAQRNEAPEPRV-EAGGSQGLNIPGVSVQGKHPNVSARYPEK 119

Query: 1658 AK-----------GGF--------KGSVLEMAREIQVETTGFRDSAPMPPKIGVDPNQIS 1536
             +           G +        KGSV E   + QV+  GF+       K+G+DP+ + 
Sbjct: 120  EEQPAVNRPEMVSGSYPSGSSISQKGSVTEGTHDKQVKNLGFQGLTSASNKVGIDPSGVP 179

Query: 1535 GKFVSGSSPLSDAGTGAPRVATQIPINRPGLNINRPMVNENMSRPVVENGATMLFVGELH 1356
             K  +  +   ++GTG P+    +P N+ G N+N P++NEN  +P +ENG TMLFVGELH
Sbjct: 180  QKIANDPAQSLNSGTGGPQGPPHVPPNQMGTNVNHPVMNENQVQPPIENGPTMLFVGELH 239

Query: 1355 WWTTDAELESVLSQYGRVKEIKFFDERASGKSKGYCQVEFFDAVAAASCKEGMNGYVFNG 1176
            WWTTDAELESVLSQYGR+KEIKFFDE+ASGKSKGYCQVEF+D  +AA CKEGMNGY+FNG
Sbjct: 240  WWTTDAELESVLSQYGRLKEIKFFDEKASGKSKGYCQVEFYDPSSAAVCKEGMNGYMFNG 299

Query: 1175 RACVVAFASPQTLKQMGAAYQNKTQVQAQSQPQGRRPMNDGIGRGGGMNY-----XXXXX 1011
            RACVVAFASPQTLKQMGA+Y NK Q Q+Q+QPQGRRP N+G+GRGG +NY          
Sbjct: 300  RACVVAFASPQTLKQMGASYMNKNQGQSQAQPQGRRP-NEGLGRGGNLNYQSGDAGRNYG 358

Query: 1010 XXXXXXXXXXXXXXXXXXXXXXXXXXXGAKSMIXXXXXXXXXXXXGIPYGQXXXXXXXXX 831
                                       G K+M+               YGQ         
Sbjct: 359  RGGWGRGGQGGVNRAGGGGLMRGRGGVGVKNMVGISAGVGNGANGAGAYGQ-GPGPAFGG 417

Query: 830  XXXGMMHPQSMMGAGFDXXXXXXXXXXXXXXXXXXXXXXPSFPTMNTVGLPGVAPHVNPA 651
               GMMHPQ MMGAGFD                      PSFP +NT+GL GVAPHVNPA
Sbjct: 418  PAGGMMHPQGMMGAGFDPTYMVRGGGYGGFPGPGFPGMLPSFPAVNTMGLAGVAPHVNPA 477

Query: 650  FFXXXXXXXXXXXXXXXXXXGHHAGMWTDTSVGGGWGGDEHG-RTKEXXXXXXXXXXXXX 474
            FF                  G HAGMWTD S+ GGWGGDEHG RT+E             
Sbjct: 478  FFGRGMAPNGMGMMGASGMDGPHAGMWTDASM-GGWGGDEHGRRTRESSYGGEDGASEYG 536

Query: 473  XGEATHERGRSNAPSWEKDRGSERDWSGN---XXXXXXXXXXXXXXXXXXXXXXXXEADG 303
             G+A HE+GRS+  S EK+R SER+WSGN                           E D 
Sbjct: 537  YGDANHEKGRSSGASREKERVSEREWSGNSDRRHRDEKEQDWDRSEREHREHRYREEKDS 596

Query: 302  YRDHRLXXXXXXXXXXXXXXXXXXXXXXXXSMMQEDDHRSRSRDVDYGKRRRLPSE 135
            YR+HR                           M E++HRSRSRDVDYGK+RRLPSE
Sbjct: 597  YREHRHRERDLDYDDDWDRGQSSSRSRRRSHAMPEEEHRSRSRDVDYGKKRRLPSE 652


>ref|XP_006438179.1| hypothetical protein CICLE_v10030915mg [Citrus clementina]
            gi|557540375|gb|ESR51419.1| hypothetical protein
            CICLE_v10030915mg [Citrus clementina]
          Length = 658

 Score =  515 bits (1326), Expect = e-143
 Identities = 319/662 (48%), Positives = 367/662 (55%), Gaps = 37/662 (5%)
 Frame = -1

Query: 2009 MDPMAEEQLDYGDEEYG-TQKMQYQSGGAISALADEDLMGEDDEYDDLYNDVNIGEGFLQ 1833
            MD MAEEQ+DY +EEYG  QKMQYQ GGAI ALADE+LMGEDDEYDDLYNDVN+G+G LQ
Sbjct: 1    MDSMAEEQIDYEEEEYGGAQKMQYQGGGAIPALADEELMGEDDEYDDLYNDVNVGDGLLQ 60

Query: 1832 LQRSE-PVSLGGVESGGVQTQETDGPGSKAPEHGASQDVNIPGV-VE------------R 1695
             Q+ E P    GV +G +Q ++TD P  +  + G SQ  N+PGV VE            +
Sbjct: 61   FQQPEAPPPSAGVGNGRLQVKKTDVPEQQV-QAGVSQGSNVPGVSVEGKYTNAGTHFPAQ 119

Query: 1694 NDSNIRATVPDQAKGGF--------KGSVLEMAREIQVETTGFRDSAPMPPKIGVDPNQI 1539
            ND  +    P+   G +        KGSV E   +  V   GF+ S   PP+ GVDP+ +
Sbjct: 120  NDVQVAVNRPNMGSGNYPDGASVSQKGSVQETTHDAHVRNMGFQGSTSGPPRTGVDPSNM 179

Query: 1538 SGKFVSGSSPLSDAGTGAPRVATQIPINRPGLNIN--RPMVNENMSRPVVENGATMLFVG 1365
             G+  +  +P+ + G   P+ A  IP N+ G+NIN  R MVNEN  RP +ENG TMLFVG
Sbjct: 180  PGRVANEPAPVLNPGAAGPQGAL-IPANQMGVNINVNRAMVNENQIRPPLENGGTMLFVG 238

Query: 1364 ELHWWTTDAELESVLSQYGRVKEIKFFDERASGKSKGYCQVEFFDAVAAASCKEGMNGYV 1185
            ELHWWTTDAELESVLSQYGRVKEIKFFDERASGKSKGYCQVEFFDA AAA+CK+GMNG+V
Sbjct: 239  ELHWWTTDAELESVLSQYGRVKEIKFFDERASGKSKGYCQVEFFDAAAAAACKDGMNGHV 298

Query: 1184 FNGRACVVAFASPQTLKQMGAAYQNKTQVQAQSQPQGRRPMNDGIGRGGGMNY-----XX 1020
            FNGR CVVAFASPQTLKQMGA+Y NK Q Q QSQ QGRRPMNDG GRGG MNY       
Sbjct: 299  FNGRPCVVAFASPQTLKQMGASYMNKNQGQPQSQTQGRRPMNDGGGRGGNMNYQSGDGGR 358

Query: 1019 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGAKSMIXXXXXXXXXXXXGI--PYGQXXXX 846
                                          GAK+M+                 YGQ    
Sbjct: 359  NFGRGGWGRGGQGVPNRGPGGGAMRGRGPMGAKNMMGSSSGAGSGAGPAAGGGYGQGLAG 418

Query: 845  XXXXXXXXGMMHPQSMMGAGFDXXXXXXXXXXXXXXXXXXXXXXPSFPTMNTVGLPGVAP 666
                    GMMHPQ+MMG GFD                      PSFP +N +GL GVAP
Sbjct: 419  PGFGGPAGGMMHPQNMMG-GFDPTYMGRGGGYGGFSGPGFPGMLPSFPAVNAMGLAGVAP 477

Query: 665  HVNPAFFXXXXXXXXXXXXXXXXXXGHHAGMWTDTSVGGGWGGDEHG-RTKEXXXXXXXX 489
            HVNPAFF                  G H GMWTD+S+ GGW G+EHG RT+E        
Sbjct: 478  HVNPAFFNRGMAANGMGMMGSSGMDGPHPGMWTDSSM-GGWVGEEHGRRTRESSYGGDDG 536

Query: 488  XXXXXXGEATHERG-RSNAPSWEKDRGSERDWSGN---XXXXXXXXXXXXXXXXXXXXXX 321
                  GEA HE+G RS A S EKDRGSERDWSGN                         
Sbjct: 537  ASDYGYGEANHEKGARSTAASREKDRGSERDWSGNTDRRHREEREQDWDRSERDHRDHRH 596

Query: 320  XXEADGYRDHRLXXXXXXXXXXXXXXXXXXXXXXXXSMMQEDDHRSRSRDVDYGKRRRLP 141
              E D YRD R                           + ++DHRSRSRDVDYGKRRRLP
Sbjct: 597  REEKDSYRDRRQRDRDSTYDDNWDRGPSSSRSRSRSRAIPDEDHRSRSRDVDYGKRRRLP 656

Query: 140  SE 135
            SE
Sbjct: 657  SE 658


>ref|XP_006483997.1| PREDICTED: cleavage and polyadenylation specificity factor subunit
            CG7185-like isoform X1 [Citrus sinensis]
          Length = 658

 Score =  511 bits (1317), Expect = e-142
 Identities = 318/662 (48%), Positives = 366/662 (55%), Gaps = 37/662 (5%)
 Frame = -1

Query: 2009 MDPMAEEQLDYGDEEYG-TQKMQYQSGGAISALADEDLMGEDDEYDDLYNDVNIGEGFLQ 1833
            MD MAEEQ+DY +EEYG  QKMQYQ GGAI ALADE+LMGEDDEYDDLYNDVN+G+G LQ
Sbjct: 1    MDSMAEEQIDYEEEEYGGAQKMQYQGGGAIPALADEELMGEDDEYDDLYNDVNVGDGLLQ 60

Query: 1832 LQRSE-PVSLGGVESGGVQTQETDGPGSKAPEHGASQDVNIPGV-VE------------R 1695
             Q+ E P    GV +G +Q ++TD P  +  + G SQ  N+PGV VE            +
Sbjct: 61   FQQPEAPPPSAGVGNGRLQVKKTDVPEQQV-QAGVSQGSNVPGVSVEGKYTNAGTHFPAQ 119

Query: 1694 NDSNIRATVPDQAKGGF--------KGSVLEMAREIQVETTGFRDSAPMPPKIGVDPNQI 1539
            ND  +    P+   G +        KGSV E   +  V   GF+ S   P + GVDP+ +
Sbjct: 120  NDVQVAVNRPNMGSGNYPDGASVSQKGSVQETTHDAHVRNMGFQGSTSGPSRTGVDPSNM 179

Query: 1538 SGKFVSGSSPLSDAGTGAPRVATQIPINRPGLNIN--RPMVNENMSRPVVENGATMLFVG 1365
             G+  +  +P+ + G   P+ A  IP N+ G+NIN  R MVNEN  RP +ENG TMLFVG
Sbjct: 180  PGRVANEPAPVLNPGAAGPQGAL-IPANQMGVNINVNRAMVNENQIRPPLENGGTMLFVG 238

Query: 1364 ELHWWTTDAELESVLSQYGRVKEIKFFDERASGKSKGYCQVEFFDAVAAASCKEGMNGYV 1185
            ELHWWTTDAELESVLSQYGRVKEIKFFDERASGKSKGYCQVEFFDA AAA+CK+GMNG+V
Sbjct: 239  ELHWWTTDAELESVLSQYGRVKEIKFFDERASGKSKGYCQVEFFDAAAAAACKDGMNGHV 298

Query: 1184 FNGRACVVAFASPQTLKQMGAAYQNKTQVQAQSQPQGRRPMNDGIGRGGGMNY-----XX 1020
            FNGR CVVAFASPQTLKQMGA+Y NK Q Q QSQ QGRRPMNDG GRGG MNY       
Sbjct: 299  FNGRPCVVAFASPQTLKQMGASYMNKNQGQPQSQTQGRRPMNDGGGRGGNMNYQSGDGGR 358

Query: 1019 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGAKSMIXXXXXXXXXXXXGI--PYGQXXXX 846
                                          GA++MI                 YGQ    
Sbjct: 359  NFGRGGWGRGGQGVPNRGPGGGAMRGRGPMGARNMIGSSSGAGSGVGHAAGGGYGQGLAG 418

Query: 845  XXXXXXXXGMMHPQSMMGAGFDXXXXXXXXXXXXXXXXXXXXXXPSFPTMNTVGLPGVAP 666
                    GMMHPQ+MMG GFD                      PSFP +N +GL GVAP
Sbjct: 419  PGFGGPAGGMMHPQNMMG-GFDPTYMGRGGGYGGFSGPGFPGMLPSFPAVNAMGLAGVAP 477

Query: 665  HVNPAFFXXXXXXXXXXXXXXXXXXGHHAGMWTDTSVGGGWGGDEHG-RTKEXXXXXXXX 489
            HVNPAFF                  G H GMWTD+S+ GGW G+EHG RT+E        
Sbjct: 478  HVNPAFFNRGMAANGMGMMGSSGMDGPHPGMWTDSSM-GGWLGEEHGRRTRESSYGGDDG 536

Query: 488  XXXXXXGEATHERG-RSNAPSWEKDRGSERDWSGN---XXXXXXXXXXXXXXXXXXXXXX 321
                  GEA HE+G RS A S EKDRGSERDWSGN                         
Sbjct: 537  ASDYGYGEANHEKGARSTAASREKDRGSERDWSGNTDRRHREEREQDWDRSERDHRDHRH 596

Query: 320  XXEADGYRDHRLXXXXXXXXXXXXXXXXXXXXXXXXSMMQEDDHRSRSRDVDYGKRRRLP 141
              E D YRD R                           + ++DHRSRSRDVDYGKRRRLP
Sbjct: 597  REEKDSYRDRRQRDRDSTYDDNWDRGPSSSRSRSRSRAIPDEDHRSRSRDVDYGKRRRLP 656

Query: 140  SE 135
            SE
Sbjct: 657  SE 658


>ref|XP_007044908.1| RNA-binding family protein isoform 5, partial [Theobroma cacao]
            gi|508708843|gb|EOY00740.1| RNA-binding family protein
            isoform 5, partial [Theobroma cacao]
          Length = 656

 Score =  505 bits (1300), Expect = e-140
 Identities = 300/651 (46%), Positives = 364/651 (55%), Gaps = 31/651 (4%)
 Frame = -1

Query: 2009 MDPMAEEQLDYGDEEYGT-QKMQYQSGGAISALADEDLMGEDDEYDDLYNDVNIGEGFLQ 1833
            MD MAEEQ+D+GDEEYG  QKMQYQ  GAI ALADE++MGEDDEYDDLYNDVN+GEGFLQ
Sbjct: 1    MDAMAEEQIDFGDEEYGGGQKMQYQGSGAIPALADEEMMGEDDEYDDLYNDVNVGEGFLQ 60

Query: 1832 LQRSE-PVSLGGVESGGVQTQETDGPGSKAPEHGASQDVNIPGV-VERNDSNIRATVPDQ 1659
            LQRSE P+  GG+ S G++ Q  + P  +  E G SQ +NIPGV V+    N+ A  P++
Sbjct: 61   LQRSEAPLQPGGLGSTGLKAQRNEAPEPRV-EAGGSQGLNIPGVSVQGKHPNVSARYPEK 119

Query: 1658 AK-----------GGF--------KGSVLEMAREIQVETTGFRDSAPMPPKIGVDPNQIS 1536
             +           G +        KGSV E   + QV+  GF+       K+G+DP+ + 
Sbjct: 120  EEQPAVNRPEMVSGSYPSGSSISQKGSVTEGTHDKQVKNLGFQGLTSASNKVGIDPSGVP 179

Query: 1535 GKFVSGSSPLSDAGTGAPRVATQIPINRPGLNINRPMVNENMSRPVVENGATMLFVGELH 1356
             K  +  +   ++GTG P+    +P N+ G N+N P++NEN  +P +ENG TMLFVGELH
Sbjct: 180  QKIANDPAQSLNSGTGGPQGPPHVPPNQMGTNVNHPVMNENQVQPPIENGPTMLFVGELH 239

Query: 1355 WWTTDAELESVLSQYGRVKEIKFFDERASGKSKGYCQVEFFDAVAAASCKEGMNGYVFNG 1176
            WWTTDAELESVLSQYGR+KEIKFFDE+ASGKSKGYCQVEF+D  +AA CKEGMNGY+FNG
Sbjct: 240  WWTTDAELESVLSQYGRLKEIKFFDEKASGKSKGYCQVEFYDPSSAAVCKEGMNGYMFNG 299

Query: 1175 RACVVAFASPQTLKQMGAAYQNKTQVQAQSQPQGRRPMNDGIGRGGGMNY-----XXXXX 1011
            RACVVAFASPQTLKQMGA+Y NK Q Q+Q+QPQGRRP N+G+GRGG +NY          
Sbjct: 300  RACVVAFASPQTLKQMGASYMNKNQGQSQAQPQGRRP-NEGLGRGGNLNYQSGDAGRNYG 358

Query: 1010 XXXXXXXXXXXXXXXXXXXXXXXXXXXGAKSMIXXXXXXXXXXXXGIPYGQXXXXXXXXX 831
                                       G K+M+               YGQ         
Sbjct: 359  RGGWGRGGQGGVNRAGGGGLMRGRGGVGVKNMVGISAGVGNGANGAGAYGQ-GPGPAFGG 417

Query: 830  XXXGMMHPQSMMGAGFDXXXXXXXXXXXXXXXXXXXXXXPSFPTMNTVGLPGVAPHVNPA 651
               GMMHPQ MMGAGFD                      PSFP +NT+GL GVAPHVNPA
Sbjct: 418  PAGGMMHPQGMMGAGFDPTYMVRGGGYGGFPGPGFPGMLPSFPAVNTMGLAGVAPHVNPA 477

Query: 650  FFXXXXXXXXXXXXXXXXXXGHHAGMWTDTSVGGGWGGDEHG-RTKEXXXXXXXXXXXXX 474
            FF                  G HAGMWTD S+ GGWGGDEHG RT+E             
Sbjct: 478  FFGRGMAPNGMGMMGASGMDGPHAGMWTDASM-GGWGGDEHGRRTRESSYGGEDGASEYG 536

Query: 473  XGEATHERGRSNAPSWEKDRGSERDWSGN---XXXXXXXXXXXXXXXXXXXXXXXXEADG 303
             G+A HE+GRS+  S EK+R SER+WSGN                           E D 
Sbjct: 537  YGDANHEKGRSSGASREKERVSEREWSGNSDRRHRDEKEQDWDRSEREHREHRYREEKDS 596

Query: 302  YRDHRLXXXXXXXXXXXXXXXXXXXXXXXXSMMQEDDHRSRSRDVDYGKRR 150
            YR+HR                           M E++HRSRSRDV Y + +
Sbjct: 597  YREHRHRERDLDYDDDWDRGQSSSRSRRRSHAMPEEEHRSRSRDVGYREEK 647


>ref|XP_006483998.1| PREDICTED: cleavage and polyadenylation specificity factor subunit
            CG7185-like isoform X1 [Citrus sinensis]
          Length = 655

 Score =  499 bits (1286), Expect = e-138
 Identities = 312/659 (47%), Positives = 361/659 (54%), Gaps = 37/659 (5%)
 Frame = -1

Query: 2000 MAEEQLDYGDEEYG-TQKMQYQSGGAISALADEDLMGEDDEYDDLYNDVNIGEGFLQLQR 1824
            MAEEQ+DY ++EYG  QKMQYQ GGAI ALADE+LMGEDDEYDDLYNDVN+G+G LQ Q+
Sbjct: 1    MAEEQIDYEEDEYGGAQKMQYQGGGAIPALADEELMGEDDEYDDLYNDVNVGDGLLQFQQ 60

Query: 1823 SE-PVSLGGVESGGVQTQETDGPGSKAPEHGASQDVNIPGV-VE------------RNDS 1686
             E P    GV +G +Q ++TD P  +  + G SQ  NIPGV VE            +ND 
Sbjct: 61   PEAPPPSAGVGNGRLQVKKTDVPEQRV-QVGGSQGSNIPGVSVEGKYTNAGSHFPAQNDV 119

Query: 1685 NIRATVPDQAKGGF--------KGSVLEMAREIQVETTGFRDSAPMPPKIGVDPNQISGK 1530
             +    P+   G +        KGSV E   +  V   GF+ S   P + GVDP+ + G+
Sbjct: 120  QVAVNRPNMGSGNYPDGASVSQKGSVQETTHDAHVRNMGFQGSTSGPSRTGVDPSNMPGR 179

Query: 1529 FVSGSSPLSDAGTGAPRVATQIPINRPGLN--INRPMVNENMSRPVVENGATMLFVGELH 1356
              +  +P+ + G   P+ A  IP N+ G+N  +NR MVNEN  RP +ENG TMLFVGELH
Sbjct: 180  VANEPAPVLNPGAAGPQGAL-IPANQMGVNANVNRVMVNENQIRPPLENGGTMLFVGELH 238

Query: 1355 WWTTDAELESVLSQYGRVKEIKFFDERASGKSKGYCQVEFFDAVAAASCKEGMNGYVFNG 1176
            WWTTDAELESVLSQYGR KEIKFFDERASGKSKGYCQVEFFDA AAA+CK+GMNG+VFNG
Sbjct: 239  WWTTDAELESVLSQYGRAKEIKFFDERASGKSKGYCQVEFFDAAAAAACKDGMNGHVFNG 298

Query: 1175 RACVVAFASPQTLKQMGAAYQNKTQVQAQSQPQGRRPMNDGIGRGGGMNY-----XXXXX 1011
            R CVVAFASPQTLKQMGA+Y NK Q Q QSQ QG RPMNDG GRGG  NY          
Sbjct: 299  RPCVVAFASPQTLKQMGASYMNKNQGQPQSQNQGSRPMNDGGGRGGNTNYQSGDGGRNFG 358

Query: 1010 XXXXXXXXXXXXXXXXXXXXXXXXXXXGAKSMIXXXXXXXXXXXXGI--PYGQXXXXXXX 837
                                       GA++MI                 YGQ       
Sbjct: 359  RGGWGRGGQGVPNRGPGGGAMRGRGPMGARNMIGSSSGAGSGVGHAAGGGYGQGLAGPGF 418

Query: 836  XXXXXGMMHPQSMMGAGFDXXXXXXXXXXXXXXXXXXXXXXPSFPTMNTVGLPGVAPHVN 657
                 GMMHPQ+MMG GFD                      PSFP +N +GL GVAPHVN
Sbjct: 419  GGPAGGMMHPQNMMG-GFDPTYMGRGGGYGGFSGPGFPGMLPSFPAVNAMGLAGVAPHVN 477

Query: 656  PAFFXXXXXXXXXXXXXXXXXXGHHAGMWTDTSVGGGWGGDEHG-RTKEXXXXXXXXXXX 480
            PAFF                  G H GMWTD+S+ GGW G+EHG RT+E           
Sbjct: 478  PAFFNRGMAANGMGMMGSSGMDGPHPGMWTDSSM-GGWLGEEHGRRTRESSYGGDDGASD 536

Query: 479  XXXGEATHERG-RSNAPSWEKDRGSERDWSGN---XXXXXXXXXXXXXXXXXXXXXXXXE 312
               GEA HE+G RS A S EKDRGSERDWSGN                           E
Sbjct: 537  YGYGEANHEKGARSTAASREKDRGSERDWSGNTDRRHREEREQDWDRSERDHRDHRHREE 596

Query: 311  ADGYRDHRLXXXXXXXXXXXXXXXXXXXXXXXXSMMQEDDHRSRSRDVDYGKRRRLPSE 135
             D YRD R                           + ++DHRSRSRDVDYGKRRRLPSE
Sbjct: 597  KDSYRDRRQRDRDSTYDDNWDRGQSSSRSRSRSGAIPDEDHRSRSRDVDYGKRRRLPSE 655


>ref|XP_006438180.1| hypothetical protein CICLE_v10030917mg [Citrus clementina]
            gi|567891321|ref|XP_006438181.1| hypothetical protein
            CICLE_v10030917mg [Citrus clementina]
            gi|557540376|gb|ESR51420.1| hypothetical protein
            CICLE_v10030917mg [Citrus clementina]
            gi|557540377|gb|ESR51421.1| hypothetical protein
            CICLE_v10030917mg [Citrus clementina]
          Length = 655

 Score =  498 bits (1282), Expect = e-138
 Identities = 310/659 (47%), Positives = 361/659 (54%), Gaps = 37/659 (5%)
 Frame = -1

Query: 2000 MAEEQLDYGDEEYG-TQKMQYQSGGAISALADEDLMGEDDEYDDLYNDVNIGEGFLQLQR 1824
            MAEEQ+DY ++EYG  QKMQYQ GGAI ALADE+LMGEDDEYDDLYND+N+G+G LQ Q+
Sbjct: 1    MAEEQIDYEEDEYGGAQKMQYQGGGAIPALADEELMGEDDEYDDLYNDINVGDGLLQFQQ 60

Query: 1823 SE-PVSLGGVESGGVQTQETDGPGSKAPEHGASQDVNIPGV-VE------------RNDS 1686
             E P    GV +G +Q ++TD P  +  + G SQ  NIPGV VE            +ND 
Sbjct: 61   PEAPPPSAGVGNGRLQVKKTDVPEQRV-QVGGSQGSNIPGVSVEGKYTNAGSDFPAQNDV 119

Query: 1685 NIRATVPDQAKGGF--------KGSVLEMAREIQVETTGFRDSAPMPPKIGVDPNQISGK 1530
             +    P+   G +        KGSV E   +  V   GF+ S   P + GVDP+ + G+
Sbjct: 120  QVAVNRPNMGSGNYPDGASVSQKGSVQETTHDAHVRNMGFQGSTSGPSRTGVDPSNMPGR 179

Query: 1529 FVSGSSPLSDAGTGAPRVATQIPINRPGLN--INRPMVNENMSRPVVENGATMLFVGELH 1356
              +  +P+ + G   P+ A  IP N+ G+N  +NR MVNEN  RP +ENG TMLFVGELH
Sbjct: 180  AANEPAPVLNPGAAGPQGAL-IPANQMGVNANVNRVMVNENQIRPPLENGGTMLFVGELH 238

Query: 1355 WWTTDAELESVLSQYGRVKEIKFFDERASGKSKGYCQVEFFDAVAAASCKEGMNGYVFNG 1176
            WWTTDAELESVLSQYGR KEIKFFDERASGKSKGYCQVEFFDA AAA+CK+GMNG+VFNG
Sbjct: 239  WWTTDAELESVLSQYGRAKEIKFFDERASGKSKGYCQVEFFDAAAAAACKDGMNGHVFNG 298

Query: 1175 RACVVAFASPQTLKQMGAAYQNKTQVQAQSQPQGRRPMNDGIGRGGGMNY-----XXXXX 1011
            R CVVAFASPQTLKQMGA+Y NK Q Q QSQ QG RPMNDG GRGG  NY          
Sbjct: 299  RPCVVAFASPQTLKQMGASYMNKNQGQPQSQNQGSRPMNDGGGRGGNTNYQSGDGGRNFG 358

Query: 1010 XXXXXXXXXXXXXXXXXXXXXXXXXXXGAKSMIXXXXXXXXXXXXGI--PYGQXXXXXXX 837
                                       GA++MI                 YGQ       
Sbjct: 359  RGGWGRGGQGVPNRGPGGGAMRGRGPMGARNMIGSSSGAGSGAGHAAGGGYGQGLAGPGF 418

Query: 836  XXXXXGMMHPQSMMGAGFDXXXXXXXXXXXXXXXXXXXXXXPSFPTMNTVGLPGVAPHVN 657
                 GMMHPQ+MMG GFD                      PSFP +N +GL GVAPHVN
Sbjct: 419  GGPAGGMMHPQNMMG-GFDPTYMGRGGGYGGFSGPGFPGMLPSFPAVNAMGLAGVAPHVN 477

Query: 656  PAFFXXXXXXXXXXXXXXXXXXGHHAGMWTDTSVGGGWGGDEHG-RTKEXXXXXXXXXXX 480
            PAFF                  G H GMWTD+S+ GGW G+EHG RT+E           
Sbjct: 478  PAFFNRGMAANGMGMMGSSGMDGPHPGMWTDSSM-GGWVGEEHGRRTRESSYGGDDGASD 536

Query: 479  XXXGEATHERG-RSNAPSWEKDRGSERDWSGN---XXXXXXXXXXXXXXXXXXXXXXXXE 312
               GEA+HE+G RS   S EKDRGSERDWSGN                           E
Sbjct: 537  YGYGEASHEKGARSTTASREKDRGSERDWSGNTDRRHREEREQDWDRSERDHRDHRHREE 596

Query: 311  ADGYRDHRLXXXXXXXXXXXXXXXXXXXXXXXXSMMQEDDHRSRSRDVDYGKRRRLPSE 135
             D YRD R                           + ++DHRSRSRDVDYGKRRRLPSE
Sbjct: 597  KDSYRDRRQRDRDSTYDDNWDRGQSSSRSRSRSGAIPDEDHRSRSRDVDYGKRRRLPSE 655


>ref|XP_006341786.1| PREDICTED: cleavage and polyadenylation specificity factor subunit
            CG7185-like isoform X1 [Solanum tuberosum]
            gi|565349616|ref|XP_006341787.1| PREDICTED: cleavage and
            polyadenylation specificity factor subunit CG7185-like
            isoform X2 [Solanum tuberosum]
          Length = 648

 Score =  495 bits (1275), Expect = e-137
 Identities = 300/657 (45%), Positives = 358/657 (54%), Gaps = 32/657 (4%)
 Frame = -1

Query: 2009 MDPMAEEQLDYGDEEYG-TQKMQYQSGGAISALADEDLMGEDDEYDDLYNDVNIGEGFLQ 1833
            MDP A+EQLDYGDEEYG + KMQY   G I ALA++++MGEDDEYDDLYNDVNIGEGFLQ
Sbjct: 1    MDPTADEQLDYGDEEYGGSHKMQYHGSGTIPALAEDEMMGEDDEYDDLYNDVNIGEGFLQ 60

Query: 1832 LQRSE-PVSLGGVESGGVQTQETDGPGSKAPEHGASQDVNIPGVV-ERNDSNIRATVPDQ 1659
            LQRSE PV      +G  Q Q+   P S+A   G S++  IPG+  E   +      P Q
Sbjct: 61   LQRSEVPVPSVDAGNGNFQAQKDSFPASRAGGLG-SEEAKIPGIATEGKYAGTEVQFPQQ 119

Query: 1658 ---------------AKGGFKGSVLEMAREIQVETTGFRDSAPMPPKIGVDPNQISGKFV 1524
                           A    + S + M    Q   +G++ S PMP KIG DP  +  K  
Sbjct: 120  KGEPVVERETERPADAAQKARPSAITMTLNSQAGNSGYQGSMPMPQKIGADPMAMPEKNA 179

Query: 1523 SGSSPLSDAGTGAPRVATQIPINR----PGLNINRPMVNENMSRPVVENGATMLFVGELH 1356
            S ++PL ++    PRV   +P N+      +N+N P+++E   RP +ENG TMLFVGELH
Sbjct: 180  SEATPLMNSVVPGPRVVPHMPTNQLNSSGNVNMNNPVISETPFRPSLENGNTMLFVGELH 239

Query: 1355 WWTTDAELESVLSQYGRVKEIKFFDERASGKSKGYCQVEFFDAVAAASCKEGMNGYVFNG 1176
            WWTTDAELESVL+QYG VKEIKFFDERASGKSKGYCQVEFFD  +AA+CKEGMNGY FNG
Sbjct: 240  WWTTDAELESVLTQYGNVKEIKFFDERASGKSKGYCQVEFFDPASAAACKEGMNGYNFNG 299

Query: 1175 RACVVAFASPQTLKQMGAAYQNKTQVQAQSQPQGRRPMNDGIGRGG--------GMNYXX 1020
            RACVVAFA+PQT+KQMG++Y NKTQ Q QSQPQGRRPMN+G+GRGG        G N+  
Sbjct: 300  RACVVAFATPQTIKQMGSSYANKTQNQVQSQPQGRRPMNEGVGRGGPNYTPGDAGRNF-- 357

Query: 1019 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGAKSMIXXXXXXXXXXXXGIPYGQXXXXXX 840
                                          G+K+M+               +GQ      
Sbjct: 358  --GRGSWGRGGPGMPNRGPGGGPVRGRGAMGSKNMMVNPGAGNGAGG---AFGQGLAGPA 412

Query: 839  XXXXXXGMMHPQSMMGAGFDXXXXXXXXXXXXXXXXXXXXXXPSFPTMNTVGLPGVAPHV 660
                  G+MHPQ MMG GFD                      P F  +N +GLPGVAPHV
Sbjct: 413  FGGPPAGLMHPQGMMGPGFDPSFMGRGAGYGGFSGPAFPGMMPPFQAVNPMGLPGVAPHV 472

Query: 659  NPAFFXXXXXXXXXXXXXXXXXXGHHAGMWTDTSVGGGWGGDEHG-RTKEXXXXXXXXXX 483
            NPAFF                  G H GMWTDTS GGGWGG+EHG RT+E          
Sbjct: 473  NPAFFGRGMAANGMGMMSAAGMDGPHPGMWTDTS-GGGWGGEEHGRRTRESSYGGEDNAS 531

Query: 482  XXXXGEATHERG-RSNAPSWEKDRGSERDWSGNXXXXXXXXXXXXXXXXXXXXXXXXEAD 306
                GE +H++G RS+A S EK+RGSERDWSGN                        E D
Sbjct: 532  EYGYGEVSHDKGARSSAVSREKERGSERDWSGNSDKRHRDEREHDRDRHDKEHRYREERD 591

Query: 305  GYRDHRLXXXXXXXXXXXXXXXXXXXXXXXXSMMQEDDHRSRSRDVDYGKRRRLPSE 135
            GYRD+R                            QE+DHRSRSRD +YGKRRR PSE
Sbjct: 592  GYRDYRQKERESEYEEDYDRGQSSSRSRSKSRAAQEEDHRSRSRDTNYGKRRRAPSE 648


>ref|XP_007044909.1| RNA-binding family protein isoform 6 [Theobroma cacao]
            gi|508708844|gb|EOY00741.1| RNA-binding family protein
            isoform 6 [Theobroma cacao]
          Length = 602

 Score =  495 bits (1275), Expect = e-137
 Identities = 283/569 (49%), Positives = 342/569 (60%), Gaps = 28/569 (4%)
 Frame = -1

Query: 2009 MDPMAEEQLDYGDEEYGT-QKMQYQSGGAISALADEDLMGEDDEYDDLYNDVNIGEGFLQ 1833
            MD MAEEQ+D+GDEEYG  QKMQYQ  GAI ALADE++MGEDDEYDDLYNDVN+GEGFLQ
Sbjct: 1    MDAMAEEQIDFGDEEYGGGQKMQYQGSGAIPALADEEMMGEDDEYDDLYNDVNVGEGFLQ 60

Query: 1832 LQRSE-PVSLGGVESGGVQTQETDGPGSKAPEHGASQDVNIPGV-VERNDSNIRATVPDQ 1659
            LQRSE P+  GG+ S G++ Q  + P  +  E G SQ +NIPGV V+    N+ A  P++
Sbjct: 61   LQRSEAPLQPGGLGSTGLKAQRNEAPEPRV-EAGGSQGLNIPGVSVQGKHPNVSARYPEK 119

Query: 1658 AK-----------GGF--------KGSVLEMAREIQVETTGFRDSAPMPPKIGVDPNQIS 1536
             +           G +        KGSV E   + QV+  GF+       K+G+DP+ + 
Sbjct: 120  EEQPAVNRPEMVSGSYPSGSSISQKGSVTEGTHDKQVKNLGFQGLTSASNKVGIDPSGVP 179

Query: 1535 GKFVSGSSPLSDAGTGAPRVATQIPINRPGLNINRPMVNENMSRPVVENGATMLFVGELH 1356
             K  +  +   ++GTG P+    +P N+ G N+N P++NEN  +P +ENG TMLFVGELH
Sbjct: 180  QKIANDPAQSLNSGTGGPQGPPHVPPNQMGTNVNHPVMNENQVQPPIENGPTMLFVGELH 239

Query: 1355 WWTTDAELESVLSQYGRVKEIKFFDERASGKSKGYCQVEFFDAVAAASCKEGMNGYVFNG 1176
            WWTTDAELESVLSQYGR+KEIKFFDE+ASGKSKGYCQVEF+D  +AA CKEGMNGY+FNG
Sbjct: 240  WWTTDAELESVLSQYGRLKEIKFFDEKASGKSKGYCQVEFYDPSSAAVCKEGMNGYMFNG 299

Query: 1175 RACVVAFASPQTLKQMGAAYQNKTQVQAQSQPQGRRPMNDGIGRGGGMNY-----XXXXX 1011
            RACVVAFASPQTLKQMGA+Y NK Q Q+Q+QPQGRRP N+G+GRGG +NY          
Sbjct: 300  RACVVAFASPQTLKQMGASYMNKNQGQSQAQPQGRRP-NEGLGRGGNLNYQSGDAGRNYG 358

Query: 1010 XXXXXXXXXXXXXXXXXXXXXXXXXXXGAKSMIXXXXXXXXXXXXGIPYGQXXXXXXXXX 831
                                       G K+M+               YGQ         
Sbjct: 359  RGGWGRGGQGGVNRAGGGGLMRGRGGVGVKNMVGISAGVGNGANGAGAYGQ-GPGPAFGG 417

Query: 830  XXXGMMHPQSMMGAGFDXXXXXXXXXXXXXXXXXXXXXXPSFPTMNTVGLPGVAPHVNPA 651
               GMMHPQ MMGAGFD                      PSFP +NT+GL GVAPHVNPA
Sbjct: 418  PAGGMMHPQGMMGAGFDPTYMVRGGGYGGFPGPGFPGMLPSFPAVNTMGLAGVAPHVNPA 477

Query: 650  FFXXXXXXXXXXXXXXXXXXGHHAGMWTDTSVGGGWGGDEHG-RTKEXXXXXXXXXXXXX 474
            FF                  G HAGMWTD S+ GGWGGDEHG RT+E             
Sbjct: 478  FFGRGMAPNGMGMMGASGMDGPHAGMWTDASM-GGWGGDEHGRRTRESSYGGEDGASEYG 536

Query: 473  XGEATHERGRSNAPSWEKDRGSERDWSGN 387
             G+A HE+GRS+  S EK+R SER+WSGN
Sbjct: 537  YGDANHEKGRSSGASREKERVSEREWSGN 565


>ref|XP_007044907.1| RNA-binding family protein isoform 4 [Theobroma cacao]
            gi|508708842|gb|EOY00739.1| RNA-binding family protein
            isoform 4 [Theobroma cacao]
          Length = 697

 Score =  495 bits (1275), Expect = e-137
 Identities = 283/569 (49%), Positives = 342/569 (60%), Gaps = 28/569 (4%)
 Frame = -1

Query: 2009 MDPMAEEQLDYGDEEYGT-QKMQYQSGGAISALADEDLMGEDDEYDDLYNDVNIGEGFLQ 1833
            MD MAEEQ+D+GDEEYG  QKMQYQ  GAI ALADE++MGEDDEYDDLYNDVN+GEGFLQ
Sbjct: 1    MDAMAEEQIDFGDEEYGGGQKMQYQGSGAIPALADEEMMGEDDEYDDLYNDVNVGEGFLQ 60

Query: 1832 LQRSE-PVSLGGVESGGVQTQETDGPGSKAPEHGASQDVNIPGV-VERNDSNIRATVPDQ 1659
            LQRSE P+  GG+ S G++ Q  + P  +  E G SQ +NIPGV V+    N+ A  P++
Sbjct: 61   LQRSEAPLQPGGLGSTGLKAQRNEAPEPRV-EAGGSQGLNIPGVSVQGKHPNVSARYPEK 119

Query: 1658 AK-----------GGF--------KGSVLEMAREIQVETTGFRDSAPMPPKIGVDPNQIS 1536
             +           G +        KGSV E   + QV+  GF+       K+G+DP+ + 
Sbjct: 120  EEQPAVNRPEMVSGSYPSGSSISQKGSVTEGTHDKQVKNLGFQGLTSASNKVGIDPSGVP 179

Query: 1535 GKFVSGSSPLSDAGTGAPRVATQIPINRPGLNINRPMVNENMSRPVVENGATMLFVGELH 1356
             K  +  +   ++GTG P+    +P N+ G N+N P++NEN  +P +ENG TMLFVGELH
Sbjct: 180  QKIANDPAQSLNSGTGGPQGPPHVPPNQMGTNVNHPVMNENQVQPPIENGPTMLFVGELH 239

Query: 1355 WWTTDAELESVLSQYGRVKEIKFFDERASGKSKGYCQVEFFDAVAAASCKEGMNGYVFNG 1176
            WWTTDAELESVLSQYGR+KEIKFFDE+ASGKSKGYCQVEF+D  +AA CKEGMNGY+FNG
Sbjct: 240  WWTTDAELESVLSQYGRLKEIKFFDEKASGKSKGYCQVEFYDPSSAAVCKEGMNGYMFNG 299

Query: 1175 RACVVAFASPQTLKQMGAAYQNKTQVQAQSQPQGRRPMNDGIGRGGGMNY-----XXXXX 1011
            RACVVAFASPQTLKQMGA+Y NK Q Q+Q+QPQGRRP N+G+GRGG +NY          
Sbjct: 300  RACVVAFASPQTLKQMGASYMNKNQGQSQAQPQGRRP-NEGLGRGGNLNYQSGDAGRNYG 358

Query: 1010 XXXXXXXXXXXXXXXXXXXXXXXXXXXGAKSMIXXXXXXXXXXXXGIPYGQXXXXXXXXX 831
                                       G K+M+               YGQ         
Sbjct: 359  RGGWGRGGQGGVNRAGGGGLMRGRGGVGVKNMVGISAGVGNGANGAGAYGQ-GPGPAFGG 417

Query: 830  XXXGMMHPQSMMGAGFDXXXXXXXXXXXXXXXXXXXXXXPSFPTMNTVGLPGVAPHVNPA 651
               GMMHPQ MMGAGFD                      PSFP +NT+GL GVAPHVNPA
Sbjct: 418  PAGGMMHPQGMMGAGFDPTYMVRGGGYGGFPGPGFPGMLPSFPAVNTMGLAGVAPHVNPA 477

Query: 650  FFXXXXXXXXXXXXXXXXXXGHHAGMWTDTSVGGGWGGDEHG-RTKEXXXXXXXXXXXXX 474
            FF                  G HAGMWTD S+ GGWGGDEHG RT+E             
Sbjct: 478  FFGRGMAPNGMGMMGASGMDGPHAGMWTDASM-GGWGGDEHGRRTRESSYGGEDGASEYG 536

Query: 473  XGEATHERGRSNAPSWEKDRGSERDWSGN 387
             G+A HE+GRS+  S EK+R SER+WSGN
Sbjct: 537  YGDANHEKGRSSGASREKERVSEREWSGN 565


>ref|XP_004310003.1| PREDICTED: uncharacterized protein LOC101309507 [Fragaria vesca
            subsp. vesca]
          Length = 646

 Score =  479 bits (1234), Expect = e-132
 Identities = 292/650 (44%), Positives = 353/650 (54%), Gaps = 25/650 (3%)
 Frame = -1

Query: 2009 MDPMAEEQLDYGDEEYG-TQKMQYQSGGAISALADEDLMGEDDEYDDLYNDVNIGEGFLQ 1833
            MDPM EEQ+DY +EEYG  QK+QYQ  GAI ALADE+ M EDDEYDDLYNDVN+GEGFLQ
Sbjct: 1    MDPMGEEQIDYEEEEYGGAQKLQYQESGAIPALADEEPMVEDDEYDDLYNDVNVGEGFLQ 60

Query: 1832 LQRSEP-VSLGGVESGGVQTQETDGPGSKAPEHGASQDVNIPG---------VVERNDSN 1683
            + R EP +   GV +GG+Q Q+ + P  +  + GASQ+V  PG         V E+ D  
Sbjct: 61   MHRPEPPLPPAGVGNGGLQAQKNNVPEQRV-QGGASQEVKNPGFSVEGKYSSVPEQKDQP 119

Query: 1682 IRATVPDQAKGGFKGSVLEMAREIQVETTGFRDSAPMPPKIGVDPNQISGKFVSGSSPLS 1503
              + VP+ A    KG V+EM  + QV   GF+ +A M   +  D + ++GK  +G  P  
Sbjct: 120  PVSVVPEMASQ--KGRVMEMTHDAQVRNMGFQGAATMQSNVVADSSDLTGKIANGPIPSM 177

Query: 1502 DAGTGAPRVATQIPINRPGL--NINRPMVNENMSRPVVENGATMLFVGELHWWTTDAELE 1329
            ++G+  P    Q+P N+  +  N+NRPMVNEN  RP VENG+  LFVGELHWWTTDAELE
Sbjct: 178  NSGSNGPPAVQQMPANQMNMKINVNRPMVNENQIRPPVENGSATLFVGELHWWTTDAELE 237

Query: 1328 SVLSQYGRVKEIKFFDERASGKSKGYCQVEFFDAVAAASCKEGMNGYVFNGRACVVAFAS 1149
             VLSQ+GR+KEIKFFDERASGKSKGYCQV+F+D  AA++CKEGM+GYVFNGRACVVAFAS
Sbjct: 238  GVLSQFGRIKEIKFFDERASGKSKGYCQVDFYDPAAASACKEGMDGYVFNGRACVVAFAS 297

Query: 1148 PQTLKQMGAAYQNKTQVQAQSQPQGRRPMNDGIGRGGGMNY-------XXXXXXXXXXXX 990
             QTLKQMG +Y NK+Q Q Q+QPQGRRPMNDG GRGG MN+                   
Sbjct: 298  SQTLKQMGDSYVNKSQGQVQTQPQGRRPMNDGAGRGGNMNFQGGDTGRNFGRGNNWGRGG 357

Query: 989  XXXXXXXXXXXXXXXXXXXXGAKSMIXXXXXXXXXXXXGIPYGQXXXXXXXXXXXXGMMH 810
                                GA++M+            G  YGQ            GMM+
Sbjct: 358  QGVLNRGPGGGGPGRGRGAMGARNMVGNNAGVGTGANGG-GYGQGLGGPGFGGPVGGMMN 416

Query: 809  PQSMMGAGFDXXXXXXXXXXXXXXXXXXXXXXPSFPTMNTVGLPGVAPHVNPAFFXXXXX 630
               MMG GFD                      P FP +N +GL GVAPHVNPAFF     
Sbjct: 417  APGMMGPGFDPTYMGRGGGYGGFPGPGFPGMLPQFPGVNAMGLAGVAPHVNPAFFGRGMA 476

Query: 629  XXXXXXXXXXXXXGHHAGMWTDTSVGGGWGGDEHGRTKE-XXXXXXXXXXXXXXGEATHE 453
                         GHHA MW D S+ G  G ++  RT+E               GEA HE
Sbjct: 477  TNGMGMMGSSGMEGHHAPMWNDPSMAGWTGEEQDRRTRESSYGGDDGGSEYGNYGEANHE 536

Query: 452  RG-RSNAPSWEKDRGSERDWSG---NXXXXXXXXXXXXXXXXXXXXXXXXEADGYRDHRL 285
            +  RS+A   E++R SER+W+G                            E D YRDHR 
Sbjct: 537  KPVRSSAAPRERERESEREWTGTSERRHRDEREQDWDRSEREHREPRYKEEKDSYRDHRR 596

Query: 284  XXXXXXXXXXXXXXXXXXXXXXXXSMMQEDDHRSRSRDVDYGKRRRLPSE 135
                                      M EDDHRSRSRDVDYGKRRRLPSE
Sbjct: 597  RERDVAYEDDRDRGHSSSRPRSRSKAMPEDDHRSRSRDVDYGKRRRLPSE 646


>gb|EXB82464.1| Cleavage and polyadenylation specificity factor subunit [Morus
            notabilis]
          Length = 636

 Score =  475 bits (1223), Expect = e-131
 Identities = 298/660 (45%), Positives = 348/660 (52%), Gaps = 38/660 (5%)
 Frame = -1

Query: 2000 MAEEQLDYGDEEYG-TQKMQYQ-SGGAISALADEDLMGEDDEYDDLYNDVNIGEGFLQLQ 1827
            MAE+ +D+ DEEYG  QK QYQ SGGAISALADE+LMG+DDEYDDLYNDVN+GEGFLQLQ
Sbjct: 1    MAEDHIDFEDEEYGGAQKHQYQGSGGAISALADEELMGDDDEYDDLYNDVNVGEGFLQLQ 60

Query: 1826 RSEPVSLGGVES--GGVQTQETDGPGSKAPEHGASQDVNIPGV----------------- 1704
            RSE  SL        G+Q Q+ + P  +  E G SQ  NIPGV                 
Sbjct: 61   RSEAPSLPAAAGVGNGLQAQKRNFPEPRE-EIGGSQQPNIPGVSAEGRFSSAGSQFPGQQ 119

Query: 1703 ----VERNDSNIRATVPDQAKGGFKGSVLEMAREIQVETTGFRDSAPMPPKIGVDPNQIS 1536
                V++         PD A G  KG ++           GF+ S PM   +GVD + I 
Sbjct: 120  DGLKVDKKSEAGSMVYPDGASGSQKGRIV----------AGFQGSKPMLHSVGVDSSDIP 169

Query: 1535 GKFVSGSSPLSDAGTGAPRVATQIPINRPGLNIN--RPMVNENMSRPVVENGATMLFVGE 1362
            GK V+      ++G   PR    +  N+  +N N   P+VNEN  RP +ENG+TMLFVGE
Sbjct: 170  GKMVNEPIQAPNSGGAGPRGILPMQGNQTTVNANVSHPIVNENQIRPSIENGSTMLFVGE 229

Query: 1361 LHWWTTDAELESVLSQYGRVKEIKFFDERASGKSKGYCQVEFFDAVAAASCKEGMNGYVF 1182
            LHWWTTDAELESVLSQYGRVKEIKFFDERASGKSKGYCQVE++DA AA +CKEGM+G+VF
Sbjct: 230  LHWWTTDAELESVLSQYGRVKEIKFFDERASGKSKGYCQVEYYDAAAAVACKEGMHGHVF 289

Query: 1181 NGRACVVAFASPQTLKQMGAAYQNKTQVQAQSQPQGRRPMNDGIGRGGGMNY-------X 1023
            NGRACVVAFASPQTLKQMGAAY +K QVQ QSQPQGRRP+NDG+GRGG  N+        
Sbjct: 290  NGRACVVAFASPQTLKQMGAAYMSKNQVQNQSQPQGRRPINDGVGRGGNPNFQSGDGGRN 349

Query: 1022 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGAKSMIXXXXXXXXXXXXGIPYGQXXXXX 843
                                           GAK+M+               YGQ     
Sbjct: 350  FGRGGWGRGGQGAPNRGPGSGGPMRGRGGAMGAKNMVGNNAGVGGGG-----YGQGLAGP 404

Query: 842  XXXXXXXGMMHPQSMMGAGFDXXXXXXXXXXXXXXXXXXXXXXPSFPTMNTVGLPGVAPH 663
                   GMM+PQ MMG GFD                      PSFP +NT+G   VAPH
Sbjct: 405  PFGGPAGGMMNPQGMMGTGFDPTYMGRGVGYGGFAGPAFPGMLPSFPAVNTMGFAAVAPH 464

Query: 662  VNPAFFXXXXXXXXXXXXXXXXXXGHHAGMWTDTSVGGGWGGDEHG-RTKEXXXXXXXXX 486
            VNPAFF                  GH  GMW D S+ GGWGG+EHG RT+E         
Sbjct: 465  VNPAFFGRGMTNNGMGMVGSSLMDGHQGGMWNDPSI-GGWGGEEHGRRTRESSYGGDDGA 523

Query: 485  XXXXXGEATHERGRSNAPSWEKDRGSERDWSGN---XXXXXXXXXXXXXXXXXXXXXXXX 315
                 G+  HE+G        ++RGSERDWSGN                           
Sbjct: 524  SEYGYGDTNHEKG-------GRERGSERDWSGNSERRNHEERDQDWDRSQKEQKEHRYRE 576

Query: 314  EADGYRDHRLXXXXXXXXXXXXXXXXXXXXXXXXSMMQEDDHRSRSRDVDYGKRRRLPSE 135
              DG RD+R                          ++QED HRSRSRDVDYGKRRRLPSE
Sbjct: 577  GKDGSRDYRPKERELDYEDDWDRGQSSSRLRSRSRVVQEDHHRSRSRDVDYGKRRRLPSE 636


>ref|XP_002515040.1| RNA binding protein, putative [Ricinus communis]
            gi|223546091|gb|EEF47594.1| RNA binding protein, putative
            [Ricinus communis]
          Length = 644

 Score =  472 bits (1215), Expect = e-130
 Identities = 297/652 (45%), Positives = 354/652 (54%), Gaps = 30/652 (4%)
 Frame = -1

Query: 2000 MAEEQLDYGDEEYG-TQKMQYQSGGAISALADEDLMGEDDEYDDLYNDVNIGEGFLQLQR 1824
            MA+EQ+DY DEEYG  QK+QYQ  GAI ALA+E+ MGEDDEYDDLYNDVNIGE FLQ+ R
Sbjct: 1    MADEQIDYEDEEYGGAQKLQYQGSGAIPALAEEE-MGEDDEYDDLYNDVNIGENFLQMHR 59

Query: 1823 SE-PVSLGGVESGGVQTQETDGPGSKAPEHGASQDVNIPGVVERNDSNIRATVPDQ-AKG 1650
            SE P +   V +GG Q + ++       E G SQ +NIPGV   +  +     P+Q  KG
Sbjct: 60   SEAPPAPPSVGNGGFQPRNSN---DLRVESGGSQGLNIPGVAVESKYSTGTHFPEQNVKG 116

Query: 1649 GFKGSV--------------LEMAREIQVETTGFRDSAPMPPKIGVDPNQISGKFVSGSS 1512
               GSV              +EM  + Q    GF+ S   P  IGVDP+ ++ K  +  +
Sbjct: 117  PEIGSVGYPDGSSIAQKTRVMEMTNDSQARNMGFQGSTSGPSNIGVDPSDMNNKISNDPT 176

Query: 1511 PLSDAGTGAPRVATQIPINRPGLNI--NRPMVNENMSRPVVENGATMLFVGELHWWTTDA 1338
            P+ +AG   PRV  Q+P ++  +N+  NR   NEN  RP +ENG+TML+VGELHWWTTDA
Sbjct: 177  PVPNAGV--PRVIPQLPASQMNMNMDTNRSATNENQIRPPLENGSTMLYVGELHWWTTDA 234

Query: 1337 ELESVLSQYGRVKEIKFFDERASGKSKGYCQVEFFDAVAAASCKEGMNGYVFNGRACVVA 1158
            ELE+VLSQYG VKEIKFFDERASGKSKGYCQVEF+DA AAA+CKEGMNG++FNGRACVVA
Sbjct: 235  ELENVLSQYGMVKEIKFFDERASGKSKGYCQVEFYDAAAAAACKEGMNGHLFNGRACVVA 294

Query: 1157 FASPQTLKQMGAAYQNKTQVQAQSQPQGRRPMNDGIGRGGGMNY-------XXXXXXXXX 999
            FAS QTLKQMGA+Y NK Q Q QSQ QGRRPMNDG GRGG MNY                
Sbjct: 295  FASQQTLKQMGASYMNKNQGQPQSQNQGRRPMNDGAGRGGNMNYQGGDAGRNFGRGGWGR 354

Query: 998  XXXXXXXXXXXXXXXXXXXXXXXGAKSMIXXXXXXXXXXXXGIPYGQXXXXXXXXXXXXG 819
                                   GAK+++            G  YGQ             
Sbjct: 355  GGQGILNRGPGGGGRMGGRGGSMGAKNIVGGAGGVGSGANGG-GYGQGLAGPAFGGPAGA 413

Query: 818  MMHPQSMMGAGFDXXXXXXXXXXXXXXXXXXXXXXPSFPTMNTVGLPGVAPHVNPAFFXX 639
            M+ PQSMM AGFD                      PSFP +N +GL GVAPHVNPAFF  
Sbjct: 414  MLPPQSMMRAGFDPTYMGRGAGYGGFAGPGFPGMLPSFPAVNAMGLAGVAPHVNPAFFGR 473

Query: 638  XXXXXXXXXXXXXXXXGHHAGMWTDTSVGGGWGGDEHGRTKEXXXXXXXXXXXXXXGEAT 459
                            G +AGMW+DTS+ GGWG +   RT+E              GE  
Sbjct: 474  GMAPNGMGMMGPSGMDGPNAGMWSDTSM-GGWGEEPGRRTRESSYGGDDGASEYGYGEVN 532

Query: 458  HERG-RSNAPSWEKDRGSERDWSGN---XXXXXXXXXXXXXXXXXXXXXXXXEADGYRDH 291
            HE+G RS+A S EK+R SERDWSGN                           E + YRDH
Sbjct: 533  HEKGARSSAASREKERASERDWSGNSDRRHRDDREHDWDRSEREHKEHRYREEKESYRDH 592

Query: 290  RLXXXXXXXXXXXXXXXXXXXXXXXXSMMQEDDHRSRSRDVDYGKRRRLPSE 135
            R                           + E+D+RSRSRD DYGKRRRLPSE
Sbjct: 593  RQRERDSGYEDDWDRGQSSSRSRSRSRAVPEEDYRSRSRDADYGKRRRLPSE 644


>ref|XP_002312652.1| RNA recognition motif-containing family protein [Populus trichocarpa]
            gi|222852472|gb|EEE90019.1| RNA recognition
            motif-containing family protein [Populus trichocarpa]
          Length = 619

 Score =  440 bits (1132), Expect = e-120
 Identities = 282/645 (43%), Positives = 337/645 (52%), Gaps = 28/645 (4%)
 Frame = -1

Query: 1985 LDYGDEEYGTQKMQYQSGGAISALADEDLMGEDDEYDDLYNDVNIGEGFLQLQRSE-PVS 1809
            +DY +EE    KMQYQ  GAI ALA+E+ MGEDDEYDDLYNDVN+GE FLQ+  SE P  
Sbjct: 1    MDYEEEE----KMQYQGSGAIPALAEEE-MGEDDEYDDLYNDVNVGENFLQMHGSEAPAP 55

Query: 1808 LGGVESGGVQTQETDGPGSKAPEHGASQDVNIPG---VVERNDSNIRATVPDQAKGGF-- 1644
               V +GG QT+          E G SQ + I G    VE   SN +A  P+Q +     
Sbjct: 56   PATVGNGGFQTRNAH---ESRIETGGSQALAITGGGPAVEGIYSNAKAHFPEQKQVAVAV 112

Query: 1643 ---------------KGSVLEMAREIQVETTGFRDSAPMPPKIGVDPNQISGKFVSGSSP 1509
                           KG V+EM+ ++QV   GF+ S P+PP IGVDP+ +S K      P
Sbjct: 113  EAQDVGPVDGSSVAQKGRVIEMSHDVQVRNMGFQKSTPVPPGIGVDPSDMSRKNAIEPEP 172

Query: 1508 LSDAGTGAPRVATQIPINRPGLN--INRPMVNENMSRPVVENGATMLFVGELHWWTTDAE 1335
            L   G+  PR A Q+ +N+  ++  +NRP+VNEN  RP +ENG+T L+VGELHWWTTDAE
Sbjct: 173  LPITGSAGPRGAPQMQVNQMHMSADVNRPVVNENQVRPPIENGSTTLYVGELHWWTTDAE 232

Query: 1334 LESVLSQYGRVKEIKFFDERASGKSKGYCQVEFFDAVAAASCKEGMNGYVFNGRACVVAF 1155
            LES  SQ+GRVKEIKFFDERASGKSKGYCQV+F++A AAA+CKEGMNG+VFNGR CVVAF
Sbjct: 233  LESFASQFGRVKEIKFFDERASGKSKGYCQVDFYEAAAAAACKEGMNGHVFNGRPCVVAF 292

Query: 1154 ASPQTLKQMGAAYQNKTQVQAQSQPQGRRPMNDGIGRGGGMNYXXXXXXXXXXXXXXXXX 975
            ASPQTLKQMGA+Y NKTQ Q Q+Q QGR  MNDG GRGG  N+                 
Sbjct: 293  ASPQTLKQMGASYMNKTQGQPQTQSQGRGSMNDGAGRGGNANFQSGDGGRNYGRGAWGRG 352

Query: 974  XXXXXXXXXXXXXXXGAKSM----IXXXXXXXXXXXXGIPYGQXXXXXXXXXXXXGMMHP 807
                           G  +M    +            G  YGQ            GMM P
Sbjct: 353  GQGILNRGPGGGPMRGRGAMGPKNMAGNVAGVGSGANGGGYGQGLAGPAFGGPAGGMMPP 412

Query: 806  QSMMGAGFDXXXXXXXXXXXXXXXXXXXXXXPSFPTMNTVGLPGVAPHVNPAFFXXXXXX 627
            Q MMGAGFD                      PSFP +N++GL GVAPHVNPAFF      
Sbjct: 413  QGMMGAGFDPLYMGRGGGYGGFAGPGFPGMLPSFPAVNSMGLAGVAPHVNPAFFARGMAP 472

Query: 626  XXXXXXXXXXXXGHHAGMWTDTSVGGGWGGDEHGRTKEXXXXXXXXXXXXXXGEATHERG 447
                        G + GMW ++S  G  G  E+G                  GE  HE+G
Sbjct: 473  NGMGMMVSSGMDGPNPGMW-ESSYDGDEGASEYG-----------------YGEGNHEKG 514

Query: 446  -RSNAPSWEKDRGSERDWSGNXXXXXXXXXXXXXXXXXXXXXXXXEADGYRDHRLXXXXX 270
             RS+  S EK+RGSERDWSGN                        E D YR HR      
Sbjct: 515  ARSSGASREKERGSERDWSGNSDRRHRDEREQDWDRPEREHRYKEEKDSYRGHRQRERDS 574

Query: 269  XXXXXXXXXXXXXXXXXXXSMMQEDDHRSRSRDVDYGKRRRLPSE 135
                                   E+D+RSR+RDVDYGKRRRLPSE
Sbjct: 575  GYEDDRDRGHSSSRARSRSRAAPEEDYRSRTRDVDYGKRRRLPSE 619


>ref|XP_007016781.1| 3'-5'-exoribonuclease family protein isoform 1 [Theobroma cacao]
            gi|508787144|gb|EOY34400.1| 3'-5'-exoribonuclease family
            protein isoform 1 [Theobroma cacao]
          Length = 256

 Score =  381 bits (979), Expect = e-102
 Identities = 192/239 (80%), Positives = 209/239 (87%), Gaps = 3/239 (1%)
 Frame = +3

Query: 2604 QKTRT-IFK--DVDWVRPDGRGFHQCRPAFLRTGAVNAASGSAYAEFGNTKVIVSVFGPR 2774
            QKTR  IFK  D+DWVRPDGRGFHQCRPAF RTGAVN+ASGSAYAEFGNTKVIVSVFGPR
Sbjct: 18   QKTRPPIFKGNDLDWVRPDGRGFHQCRPAFFRTGAVNSASGSAYAEFGNTKVIVSVFGPR 77

Query: 2775 ESKKAMMYSDIGRLNCNVSYTTFASPVRGQGSDHKEFSAMLHKALEGAIILESFPKTTVD 2954
            ESKKAMMYSDIGRLNCNVSYTTFA+PVRGQGSDHKEFS+MLHKALEGAI+LE+FPKTTVD
Sbjct: 78   ESKKAMMYSDIGRLNCNVSYTTFATPVRGQGSDHKEFSSMLHKALEGAIMLETFPKTTVD 137

Query: 2955 VFALVLESGGSDLSVVIACASLALADAGIMMFDXXXXXXXXXXXXXXXIDPMTDEESYQD 3134
            VFALVLESGGSDL VVI+CASLALADAGIMM+D               IDP+ +EESYQD
Sbjct: 138  VFALVLESGGSDLPVVISCASLALADAGIMMYDLVAAVSVSCLGKNLVIDPILEEESYQD 197

Query: 3135 GSLMITSMPSHNEITQLTLTGEWSTPKIHEAMELCLDACSKLGKIMRSCLKESASASQQ 3311
            GSLM+T MPS  E+TQL  TGEWSTP I+EAM+LCLDAC KLGK+MRSCLKE+ SASQ+
Sbjct: 198  GSLMLTCMPSRYEVTQLIFTGEWSTPDINEAMQLCLDACGKLGKVMRSCLKEATSASQE 256


>ref|XP_002285257.1| PREDICTED: exosome complex component MTR3 [Vitis vinifera]
            gi|147834996|emb|CAN61380.1| hypothetical protein
            VITISV_037546 [Vitis vinifera]
            gi|297746275|emb|CBI16331.3| unnamed protein product
            [Vitis vinifera]
          Length = 254

 Score =  375 bits (964), Expect = e-101
 Identities = 183/230 (79%), Positives = 203/230 (88%)
 Frame = +3

Query: 2613 RTIFKDVDWVRPDGRGFHQCRPAFLRTGAVNAASGSAYAEFGNTKVIVSVFGPRESKKAM 2792
            R IF+DVDWVRPDGRGFHQCRPAFL+TGAVNAASGSAYAEFGNTKVIVSVFGPRESKKAM
Sbjct: 22   RPIFQDVDWVRPDGRGFHQCRPAFLKTGAVNAASGSAYAEFGNTKVIVSVFGPRESKKAM 81

Query: 2793 MYSDIGRLNCNVSYTTFASPVRGQGSDHKEFSAMLHKALEGAIILESFPKTTVDVFALVL 2972
             YS  GRLNCNVSYTTFA P+RGQGSDHK +S+MLHKALEGAII+ESFPKTTVDVFALVL
Sbjct: 82   AYSGTGRLNCNVSYTTFAMPIRGQGSDHKGYSSMLHKALEGAIIVESFPKTTVDVFALVL 141

Query: 2973 ESGGSDLSVVIACASLALADAGIMMFDXXXXXXXXXXXXXXXIDPMTDEESYQDGSLMIT 3152
            ESGGSDL VVI+CASLALADAGIMM+D               IDP+ +EESYQDGSL+IT
Sbjct: 142  ESGGSDLPVVISCASLALADAGIMMYDLVASVSVSCLGKNLVIDPILEEESYQDGSLLIT 201

Query: 3153 SMPSHNEITQLTLTGEWSTPKIHEAMELCLDACSKLGKIMRSCLKESASA 3302
             MPS NE+TQLT+ GEWSTP++HEAM++CL+ACSKL KI+RSCLKE+ASA
Sbjct: 202  CMPSRNEVTQLTVNGEWSTPRVHEAMQICLEACSKLAKIIRSCLKETASA 251


>gb|EXB38678.1| Exosome complex component [Morus notabilis]
          Length = 257

 Score =  369 bits (946), Expect = 8e-99
 Identities = 184/238 (77%), Positives = 207/238 (86%), Gaps = 3/238 (1%)
 Frame = +3

Query: 2604 QKTRTIF---KDVDWVRPDGRGFHQCRPAFLRTGAVNAASGSAYAEFGNTKVIVSVFGPR 2774
            QKT+  F    +VDWVRPDGRGFHQCRPAF RTGAVNAA+GSAYAEFGNTKVIVSVFGPR
Sbjct: 19   QKTKPSFFKNDNVDWVRPDGRGFHQCRPAFFRTGAVNAAAGSAYAEFGNTKVIVSVFGPR 78

Query: 2775 ESKKAMMYSDIGRLNCNVSYTTFASPVRGQGSDHKEFSAMLHKALEGAIILESFPKTTVD 2954
            ESKKAMMYSDIGRLNCNV++TTFA+PVRGQGSD K+FS+MLHKALEGAI+LE+FPKTTVD
Sbjct: 79   ESKKAMMYSDIGRLNCNVTFTTFATPVRGQGSDDKDFSSMLHKALEGAIMLETFPKTTVD 138

Query: 2955 VFALVLESGGSDLSVVIACASLALADAGIMMFDXXXXXXXXXXXXXXXIDPMTDEESYQD 3134
            VFALVLESGGSDL VVI+CAS+ALADAGIMM+D               IDP+ +EESYQD
Sbjct: 139  VFALVLESGGSDLPVVISCASVALADAGIMMYDLVTSVSVSCLGKNLVIDPVLEEESYQD 198

Query: 3135 GSLMITSMPSHNEITQLTLTGEWSTPKIHEAMELCLDACSKLGKIMRSCLKESASASQ 3308
            GSLM++ MPS  E+TQLT+TGEWST KI+E M+LCLDACSKL KIMRSCLKE+ASAS+
Sbjct: 199  GSLMLSCMPSKYEVTQLTITGEWSTAKINEGMQLCLDACSKLAKIMRSCLKEAASASE 256


>ref|XP_006424544.1| hypothetical protein CICLE_v10029091mg [Citrus clementina]
            gi|557526478|gb|ESR37784.1| hypothetical protein
            CICLE_v10029091mg [Citrus clementina]
          Length = 260

 Score =  367 bits (941), Expect = 3e-98
 Identities = 180/228 (78%), Positives = 200/228 (87%)
 Frame = +3

Query: 2628 DVDWVRPDGRGFHQCRPAFLRTGAVNAASGSAYAEFGNTKVIVSVFGPRESKKAMMYSDI 2807
            DVDW+RPD RGFHQCRPAF RTGAVN+ASGSAYAEFGNTKVIVSVFGPRESKKAMMYS+I
Sbjct: 33   DVDWLRPDSRGFHQCRPAFFRTGAVNSASGSAYAEFGNTKVIVSVFGPRESKKAMMYSNI 92

Query: 2808 GRLNCNVSYTTFASPVRGQGSDHKEFSAMLHKALEGAIILESFPKTTVDVFALVLESGGS 2987
            GRLNCNVSYTTFA+P+RGQGSDHK+FS+MLHKALEGAIILE+FPKTTVDVFALVLESGGS
Sbjct: 93   GRLNCNVSYTTFATPIRGQGSDHKDFSSMLHKALEGAIILETFPKTTVDVFALVLESGGS 152

Query: 2988 DLSVVIACASLALADAGIMMFDXXXXXXXXXXXXXXXIDPMTDEESYQDGSLMITSMPSH 3167
            DL VVI+CAS+ALADAGIMM+D               IDP+ +EESYQDGSLMI  MPS 
Sbjct: 153  DLPVVISCASVALADAGIMMYDLVASVSVSCLGKNLLIDPVLEEESYQDGSLMIACMPSR 212

Query: 3168 NEITQLTLTGEWSTPKIHEAMELCLDACSKLGKIMRSCLKESASASQQ 3311
             E+TQLT+TGEWSTP  +EAM+LCLDA +KLGKIMRSCLKE+AS  Q+
Sbjct: 213  YEVTQLTVTGEWSTPHFNEAMQLCLDASAKLGKIMRSCLKEAASDEQE 260