BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Akebia27_contig00006120
         (2517 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN77395.1| hypothetical protein VITISV_035357 [Vitis vinifera]   222   7e-55
ref|XP_002277401.1| PREDICTED: transcriptional activator DEMETER...   220   2e-54
emb|CBI40219.3| unnamed protein product [Vitis vinifera]              165   8e-38
ref|XP_002267310.1| PREDICTED: transcriptional activator DEMETER...   165   8e-38
emb|CBI30244.3| unnamed protein product [Vitis vinifera]              159   6e-36
ref|XP_007010233.1| DNA N-glycosylase/DNA-(Apurinic or apyrimidi...   149   8e-33
ref|XP_007010229.1| DNA N-glycosylase/DNA-(Apurinic or apyrimidi...   149   8e-33
ref|XP_007010228.1| DNA N-glycosylase/DNA-(Apurinic or apyrimidi...   149   8e-33
dbj|BAF52857.1| repressor of silencing 2b [Nicotiana tabacum]         147   3e-32
dbj|BAF52856.1| repressor of silencing 2a [Nicotiana tabacum]         146   4e-32
ref|XP_006492175.1| PREDICTED: transcriptional activator DEMETER...   144   3e-31
ref|XP_002528585.1| Protein ROS1, putative [Ricinus communis] gi...   142   6e-31
ref|XP_007010230.1| DNA N-glycosylase/DNA-(Apurinic or apyrimidi...   142   1e-30
ref|XP_007027613.1| Repressor of gene silencing 1 isoform 3 [The...   141   2e-30
ref|XP_007027612.1| Repressor of gene silencing 1 isoform 2 [The...   141   2e-30
ref|XP_007027611.1| Repressor of gene silencing 1 isoform 1 [The...   141   2e-30
ref|XP_007010232.1| DNA N-glycosylase/DNA-(Apurinic or apyrimidi...   140   2e-30
ref|XP_002530889.1| conserved hypothetical protein [Ricinus comm...   138   1e-29
ref|XP_006492173.1| PREDICTED: transcriptional activator DEMETER...   132   1e-27
ref|XP_006436684.1| hypothetical protein CICLE_v10030474mg [Citr...   132   1e-27

>emb|CAN77395.1| hypothetical protein VITISV_035357 [Vitis vinifera]
          Length = 1824

 Score =  222 bits (565), Expect = 7e-55
 Identities = 195/605 (32%), Positives = 282/605 (46%), Gaps = 41/605 (6%)
 Frame = +2

Query: 797  INQYG------FHDPYRSPRGIADAVSNGTISFRFAPITPEKGERVDNNQSSKMVNVSVD 958
            +NQYG      F+D    P  +A+AVS  TIS  FAPITP+K  RV+N+  +K  N+  +
Sbjct: 91   MNQYGLPTYRHFYDLNSPPESMAEAVSGSTIS-HFAPITPDKNRRVENSWVAKSQNLCPE 149

Query: 959  ERLIRDNVHSKGNNALE--------LQCKESFLQTVVDASSGTIFNTPLEENRNPEKG-- 1108
            E+ +++    K   A++        L C    LQ+  D S   + ++PL EN N + G  
Sbjct: 150  EKTVQET--EKQEKAIDTTRVEVNHLHCDSKLLQSPTDLSFAPV-SSPLNENANLDNGGN 206

Query: 1109 ------EENC---------IGLNKTPEQKAKRKKHRPRVVREGKPKRTPKATVGR-TSTK 1240
                   ENC         I LNKTP+QK +RKKHRP+VV EGKPKRTPK    + T ++
Sbjct: 207  HAIGPLTENCNFDKRGDHIIDLNKTPQQKPRRKKHRPKVVIEGKPKRTPKPVNPKCTGSQ 266

Query: 1241 ETPAVKRKYVRKK-----VSNTPANIVGETMDPAH-TTAAKSCKRALNFNLEGQAADARH 1402
              P  KRKYVRK       +N+PA I+G + +P        SC+R LNF+  G+A     
Sbjct: 267  GNPTGKRKYVRKNGVNKPSTNSPAEIMGRSTEPERPERTMMSCRRGLNFDDNGRAR---- 322

Query: 1403 ETRIHQEGMLHCNVDGSSSRLA-SRFNSESRAQELCTVVPNSSSGAKTTVQLAQGVEVMV 1579
                           GSSS ++ S  NSE +AQ+ CT        +K+ V L++ +EV V
Sbjct: 323  --------------GGSSSCISTSDLNSEPQAQDFCT----QGIQSKSVVMLSKEMEVTV 364

Query: 1580 ENSPAGFAFDLNRATTQMLDDYISLXXXXXXXXXXXXXXXXXXXXXEHQHIHALGIGDAL 1759
            E +  G A+DL R+  Q L +Y+SL                     ++         DA 
Sbjct: 365  EETQVGNAYDLTRSMNQELKNYVSLPDRQFPSTPPQRNTDHPWEKLKN---------DAQ 415

Query: 1760 CTGRSYANNENAVPSMLQNSVQ--LISKSQDNSNCSQHYKVADEEQAKGPKRGYCHATET 1933
                    ++  V    +N +Q  L S S +N+NCS    + + E  +G KR + H    
Sbjct: 416  NENDRERASQEIVCDKQENILQESLKSMSPNNTNCSTSASLKEREHRRGTKRVHSHI--V 473

Query: 1934 DERQVQSMNMMRANLNSMLVYQAICRENGYHGNNSNLDPHFPEIYKKRRTEKAKNAVLLS 2113
            D+   ++M+M     NS+  Y A  + N     N N   HFPEIYKK+RTEK  N+   +
Sbjct: 474  DKADPRTMSMNGNQYNSVQAYHAKFQAN---EQNRNPGMHFPEIYKKKRTEKGLNSTATN 530

Query: 2114 TSSGMANVGDGAGKATAQSENNANADHFASQANNNGSASQFNNADGTKNLNYGASYSDIY 2293
             S  MA   +    ATA  +N+A     AS++++  SAS+F N          +S     
Sbjct: 531  LSPVMA-AKNIVMLATACPQNHAIPSSSASKSDSWISASRFTN----------SSAPATQ 579

Query: 2294 SQSEVAGPNRQVHSIPAEMLSHKEALSRASLGILQAPKFIQTFGQTERKTKRRSKGPTQV 2473
             Q+E  G ++                       +Q    +   G  ER TK+RSKG T+V
Sbjct: 580  GQAENGGQDK-----------------------VQTFDCMLALGPRERLTKKRSKGLTRV 616

Query: 2474 HNLAS 2488
             +LAS
Sbjct: 617  RDLAS 621


>ref|XP_002277401.1| PREDICTED: transcriptional activator DEMETER-like [Vitis vinifera]
          Length = 1942

 Score =  220 bits (561), Expect = 2e-54
 Identities = 194/605 (32%), Positives = 281/605 (46%), Gaps = 41/605 (6%)
 Frame = +2

Query: 797  INQYG------FHDPYRSPRGIADAVSNGTISFRFAPITPEKGERVDNNQSSKMVNVSVD 958
            +NQYG      F+D    P  +A+AVS   IS  FAPITP+K  RV+N+  +K  N+  +
Sbjct: 188  MNQYGLPTYRHFYDLNSPPESMAEAVSGSAIS-HFAPITPDKNRRVENSWVAKSQNLCPE 246

Query: 959  ERLIRDNVHSKGNNALE--------LQCKESFLQTVVDASSGTIFNTPLEENRNPEKG-- 1108
            E+ +++    K   A++        L C    LQ+  D S   + ++PL EN N + G  
Sbjct: 247  EKTVQET--EKQEKAIDTTRVEVNHLHCDSKLLQSPTDLSFAPV-SSPLNENVNLDNGGN 303

Query: 1109 ------EENC---------IGLNKTPEQKAKRKKHRPRVVREGKPKRTPKATVGR-TSTK 1240
                   ENC         I LNKTP+QK +RKKHRP+VV EGKPKRTPK    + T ++
Sbjct: 304  HAIGPLTENCNFDKRGDHIIDLNKTPQQKPRRKKHRPKVVIEGKPKRTPKPVNPKCTGSQ 363

Query: 1241 ETPAVKRKYVRKK-----VSNTPANIVGETMDPAH-TTAAKSCKRALNFNLEGQAADARH 1402
              P  KRKYVRK       +N+PA I+G + +P        SC+R LNF+  G+A     
Sbjct: 364  GNPTGKRKYVRKNGVNKPSTNSPAEIMGRSTEPERPERTMMSCRRGLNFDDNGRAR---- 419

Query: 1403 ETRIHQEGMLHCNVDGSSSRLA-SRFNSESRAQELCTVVPNSSSGAKTTVQLAQGVEVMV 1579
                           GSSS ++ S  NSE +AQ+ CT        +K+ V L++ +EV V
Sbjct: 420  --------------GGSSSCISTSDLNSEPQAQDFCT----QGIQSKSVVMLSKEMEVTV 461

Query: 1580 ENSPAGFAFDLNRATTQMLDDYISLXXXXXXXXXXXXXXXXXXXXXEHQHIHALGIGDAL 1759
            E +  G A+DL R+  Q L +Y+SL                     ++         DA 
Sbjct: 462  EETQVGIAYDLTRSMNQELKNYVSLPDRQFPSTPPQRNTDHPWEKLKN---------DAQ 512

Query: 1760 CTGRSYANNENAVPSMLQNSVQ--LISKSQDNSNCSQHYKVADEEQAKGPKRGYCHATET 1933
                    ++  V    +N +Q  L S S +N+NCS    + + E  +G KR + H    
Sbjct: 513  NENDRERASQEIVCDKQENILQESLKSMSPNNTNCSTSASLKEREHRRGTKRVHSHI--V 570

Query: 1934 DERQVQSMNMMRANLNSMLVYQAICRENGYHGNNSNLDPHFPEIYKKRRTEKAKNAVLLS 2113
            D+   ++M+M     NS+  Y A  + N     N N   HFPEIYKK+RTEK  N+   +
Sbjct: 571  DKADPRTMSMNGNQYNSVQAYHAKFQAN---EQNRNPGMHFPEIYKKKRTEKGLNSTATN 627

Query: 2114 TSSGMANVGDGAGKATAQSENNANADHFASQANNNGSASQFNNADGTKNLNYGASYSDIY 2293
             S  MA   +    ATA  +N+A     AS++++  SAS+F N          +S     
Sbjct: 628  LSPVMA-AKNIVMLATACPQNHAIPSSSASKSDSWISASRFTN----------SSAPATQ 676

Query: 2294 SQSEVAGPNRQVHSIPAEMLSHKEALSRASLGILQAPKFIQTFGQTERKTKRRSKGPTQV 2473
             Q+E  G ++                       +Q    +   G  ER TK+RSKG T+V
Sbjct: 677  GQAENGGQDK-----------------------VQTFDCMLALGPRERLTKKRSKGLTRV 713

Query: 2474 HNLAS 2488
             +LAS
Sbjct: 714  RDLAS 718


>emb|CBI40219.3| unnamed protein product [Vitis vinifera]
          Length = 1621

 Score =  165 bits (418), Expect = 8e-38
 Identities = 201/686 (29%), Positives = 290/686 (42%), Gaps = 53/686 (7%)
 Frame = +2

Query: 608  AASASEMQRGSNNATGSPYSPISYTFSHIDNCWHQRNSENMTLVTXXXXXXXXXXXXXXC 787
            A +    +R   NA+  P  P S++   I+  W + NS +M L                 
Sbjct: 83   ATTGEAPERSLLNAS-RPQVPNSHSQFEIN--WGEDNSIDMLLGKENQCSGSSMWKNSNG 139

Query: 788  PSQINQYGFHDPYR------SPRGI-ADAVSNGTISFRFAPITPEKGERVDNNQSSKMVN 946
              QI +YGF  PY+      SP G+ ADA S+ T SF   P+TPE+ +        K++N
Sbjct: 140  LLQIPEYGFPIPYQPSFNLNSPPGVEADATSSITNSFPCPPVTPERPK--------KILN 191

Query: 947  VSVDERLIRDN----VHSKGNNALELQCKESFLQTVVDASSGTIFNTPLEENRNPEKGEE 1114
             S DE    D     + S  N A E +C E  L  +V +SS    +    +N   ++G+E
Sbjct: 192  FSADEGSSPDKNQEYITSTTNGATENRCDE-LLHNIVASSSAAPPSPCKGKNIVAKEGDE 250

Query: 1115 NCIGLNKTPEQKA-KRKKHRPRVVREGKPKRTPKATV---------------GRTSTKET 1246
              I LNKTP+QK  K++KHRP+VV EGKPK+TPK  V                 ++ KE 
Sbjct: 251  G-IDLNKTPKQKQPKKRKHRPKVVIEGKPKKTPKPKVVIEGKPKKTPKPKVPSNSNPKEN 309

Query: 1247 PAVKRKYVRK---KVSNT-PANIVGETMDPAHTTA-AKSCKRALNFNLEGQAADARHETR 1411
            P  KRKYVRK   KV  T P ++  E +DP+  +A AKSCKR LNF  E ++ D +H+  
Sbjct: 310  PTGKRKYVRKNNPKVPVTDPTDVRKEILDPSFASATAKSCKRVLNFG-EEKSGDGQHDV- 367

Query: 1412 IHQEGMLHCNVDGSSSRLASRFNSESRAQELCTVVPNSSSGAKTTVQLAQGVEVMVENS- 1588
              Q+G++        +      N  S+ +E CT + N  SG K  +Q  Q  E++V++  
Sbjct: 368  ASQQGVMQ-----QDNEPTFTLNLTSQTKEPCTRI-NIISGTKVAMQNDQQNELVVKSQQ 421

Query: 1589 ---------PAGFAFDLNRAT--TQMLDDYISLXXXXXXXXXXXXXXXXXXXXXEH---- 1723
                      A +   L R T   Q   + + L                           
Sbjct: 422  MSAVESQQISADYIAMLKRYTPAAQPTTENLQLGNLNVISRTVNKGNTDPRQRNSKNAYV 481

Query: 1724 ---QHIHALGIGDALCTGRSYANNENAVPSMLQNSVQLISKSQDNSNCSQHYKVADEEQA 1894
               QHIHA GIG  +    +   N ++            S+ Q   + SQ  K A+  QA
Sbjct: 482  PIPQHIHADGIGQIVIQPLTTQENLDS------------SRRQMMQSTSQTNKFANSNQA 529

Query: 1895 KGPKRGYCHATETDERQVQSMNMMRANLNSMLVYQAICRENGYHGNNSNLDPHFPEIYKK 2074
             G KR YCH  E  +          A+L    + Q I + N Y  N+SNL   F ++ KK
Sbjct: 530  TGSKRDYCHTIEQSQAHA-------AHLIGPSLCQEIFQVNEY--NSSNLCKVFSDMQKK 580

Query: 2075 RRTEKAKNAVLLSTSSGMANVGDGAGKATAQSENNANADHFASQANNNGSASQFNNADGT 2254
            R+TEKA    + + +S      D   +A A+S N        SQ N+      F   + +
Sbjct: 581  RKTEKAAYTNMSTMASYTTAGEDELHQAEAKSVN-----QLTSQINHGILNICFEGNNDS 635

Query: 2255 KNLNYGASYS--DIYSQSEVAGPNRQVHSIPAEMLSHKEALSRASLGILQAPKFIQTFGQ 2428
            +NL  G + +  D       AG +   H I  E  S                       Q
Sbjct: 636  QNLANGVNKTTRDSSMHQTTAGNSMWKHHISNEWPS-----------------------Q 672

Query: 2429 TERKTKRRSKGPTQVHNLASPTANAE 2506
            TE   +++  G TQ+H L   TA A+
Sbjct: 673  TEDMREKQVNGCTQLHRLTVLTAAAK 698


>ref|XP_002267310.1| PREDICTED: transcriptional activator DEMETER-like [Vitis vinifera]
          Length = 2198

 Score =  165 bits (418), Expect = 8e-38
 Identities = 201/686 (29%), Positives = 290/686 (42%), Gaps = 53/686 (7%)
 Frame = +2

Query: 608  AASASEMQRGSNNATGSPYSPISYTFSHIDNCWHQRNSENMTLVTXXXXXXXXXXXXXXC 787
            A +    +R   NA+  P  P S++   I+  W + NS +M L                 
Sbjct: 408  ATTGEAPERSLLNAS-RPQVPNSHSQFEIN--WGEDNSIDMLLGKENQCSGSSMWKNSNG 464

Query: 788  PSQINQYGFHDPYR------SPRGI-ADAVSNGTISFRFAPITPEKGERVDNNQSSKMVN 946
              QI +YGF  PY+      SP G+ ADA S+ T SF   P+TPE+ +        K++N
Sbjct: 465  LLQIPEYGFPIPYQPSFNLNSPPGVEADATSSITNSFPCPPVTPERPK--------KILN 516

Query: 947  VSVDERLIRDN----VHSKGNNALELQCKESFLQTVVDASSGTIFNTPLEENRNPEKGEE 1114
             S DE    D     + S  N A E +C E  L  +V +SS    +    +N   ++G+E
Sbjct: 517  FSADEGSSPDKNQEYITSTTNGATENRCDE-LLHNIVASSSAAPPSPCKGKNIVAKEGDE 575

Query: 1115 NCIGLNKTPEQKA-KRKKHRPRVVREGKPKRTPKATV---------------GRTSTKET 1246
              I LNKTP+QK  K++KHRP+VV EGKPK+TPK  V                 ++ KE 
Sbjct: 576  G-IDLNKTPKQKQPKKRKHRPKVVIEGKPKKTPKPKVVIEGKPKKTPKPKVPSNSNPKEN 634

Query: 1247 PAVKRKYVRK---KVSNT-PANIVGETMDPAHTTA-AKSCKRALNFNLEGQAADARHETR 1411
            P  KRKYVRK   KV  T P ++  E +DP+  +A AKSCKR LNF  E ++ D +H+  
Sbjct: 635  PTGKRKYVRKNNPKVPVTDPTDVRKEILDPSFASATAKSCKRVLNFG-EEKSGDGQHDV- 692

Query: 1412 IHQEGMLHCNVDGSSSRLASRFNSESRAQELCTVVPNSSSGAKTTVQLAQGVEVMVENS- 1588
              Q+G++        +      N  S+ +E CT + N  SG K  +Q  Q  E++V++  
Sbjct: 693  ASQQGVMQ-----QDNEPTFTLNLTSQTKEPCTRI-NIISGTKVAMQNDQQNELVVKSQQ 746

Query: 1589 ---------PAGFAFDLNRAT--TQMLDDYISLXXXXXXXXXXXXXXXXXXXXXEH---- 1723
                      A +   L R T   Q   + + L                           
Sbjct: 747  MSAVESQQISADYIAMLKRYTPAAQPTTENLQLGNLNVISRTVNKGNTDPRQRNSKNAYV 806

Query: 1724 ---QHIHALGIGDALCTGRSYANNENAVPSMLQNSVQLISKSQDNSNCSQHYKVADEEQA 1894
               QHIHA GIG  +    +   N ++            S+ Q   + SQ  K A+  QA
Sbjct: 807  PIPQHIHADGIGQIVIQPLTTQENLDS------------SRRQMMQSTSQTNKFANSNQA 854

Query: 1895 KGPKRGYCHATETDERQVQSMNMMRANLNSMLVYQAICRENGYHGNNSNLDPHFPEIYKK 2074
             G KR YCH  E  +          A+L    + Q I + N Y  N+SNL   F ++ KK
Sbjct: 855  TGSKRDYCHTIEQSQAHA-------AHLIGPSLCQEIFQVNEY--NSSNLCKVFSDMQKK 905

Query: 2075 RRTEKAKNAVLLSTSSGMANVGDGAGKATAQSENNANADHFASQANNNGSASQFNNADGT 2254
            R+TEKA    + + +S      D   +A A+S N        SQ N+      F   + +
Sbjct: 906  RKTEKAAYTNMSTMASYTTAGEDELHQAEAKSVN-----QLTSQINHGILNICFEGNNDS 960

Query: 2255 KNLNYGASYS--DIYSQSEVAGPNRQVHSIPAEMLSHKEALSRASLGILQAPKFIQTFGQ 2428
            +NL  G + +  D       AG +   H I  E  S                       Q
Sbjct: 961  QNLANGVNKTTRDSSMHQTTAGNSMWKHHISNEWPS-----------------------Q 997

Query: 2429 TERKTKRRSKGPTQVHNLASPTANAE 2506
            TE   +++  G TQ+H L   TA A+
Sbjct: 998  TEDMREKQVNGCTQLHRLTVLTAAAK 1023


>emb|CBI30244.3| unnamed protein product [Vitis vinifera]
          Length = 1470

 Score =  159 bits (402), Expect = 6e-36
 Identities = 127/392 (32%), Positives = 187/392 (47%), Gaps = 26/392 (6%)
 Frame = +2

Query: 1034 QTVVDASSGTIFN--TPLEENRNPEKGEE--------------NCIGLNKTPEQKAKRKK 1165
            +++ +A SG+  +   P+  ++N  K E+              + I LNKTP+QK +RKK
Sbjct: 40   ESMAEAVSGSAISHFAPITPDKNRRKQEKAIDTTRVEVNHLHYHIIDLNKTPQQKPRRKK 99

Query: 1166 HRPRVVREGKPKRTPKATVGR-TSTKETPAVKRKYVRKK-----VSNTPANIVGETMDPA 1327
            HRP+VV EGKPKRTPK    + T ++  P  KRKYVRK       +N+PA I+G + +P 
Sbjct: 100  HRPKVVIEGKPKRTPKPVNPKCTGSQGNPTGKRKYVRKNGVNKPSTNSPAEIMGRSTEPE 159

Query: 1328 H-TTAAKSCKRALNFNLEGQAADARHETRIHQEGMLHCNVDGSSSRLA-SRFNSESRAQE 1501
                   SC+R LNF+  G+A                    GSSS ++ S  NSE +AQ+
Sbjct: 160  RPERTMMSCRRGLNFDDNGRAR------------------GGSSSCISTSDLNSEPQAQD 201

Query: 1502 LCTVVPNSSSGAKTTVQLAQGVEVMVENSPAGFAFDLNRATTQMLDDYISLXXXXXXXXX 1681
             CT        +K+ V L++ +EV VE +  G A+DL R+  Q L +Y+SL         
Sbjct: 202  FCT----QGIQSKSVVMLSKEMEVTVEETQVGIAYDLTRSMNQELKNYVSLPDRQFPSTP 257

Query: 1682 XXXXXXXXXXXXEHQHIHALGIGDALCTGRSYANNENAVPSMLQNSVQ--LISKSQDNSN 1855
                        ++         DA         ++  V    +N +Q  L S S +N+N
Sbjct: 258  PQRNTDHPWEKLKN---------DAQNENDRERASQEIVCDKQENILQESLKSMSPNNTN 308

Query: 1856 CSQHYKVADEEQAKGPKRGYCHATETDERQVQSMNMMRANLNSMLVYQAICRENGYHGNN 2035
            CS    + + E  +G KR + H    D+   ++M+M     NS+  Y A  + N     N
Sbjct: 309  CSTSASLKEREHRRGTKRVHSHI--VDKADPRTMSMNGNQYNSVQAYHAKFQAN---EQN 363

Query: 2036 SNLDPHFPEIYKKRRTEKAKNAVLLSTSSGMA 2131
             N   HFPEIYKK+RTEK  N+   + S  MA
Sbjct: 364  RNPGMHFPEIYKKKRTEKGLNSTATNLSPVMA 395


>ref|XP_007010233.1| DNA N-glycosylase/DNA-(Apurinic or apyrimidinic site) lyase, putative
            isoform 6, partial [Theobroma cacao]
            gi|508727146|gb|EOY19043.1| DNA
            N-glycosylase/DNA-(Apurinic or apyrimidinic site) lyase,
            putative isoform 6, partial [Theobroma cacao]
          Length = 1587

 Score =  149 bits (375), Expect = 8e-33
 Identities = 131/399 (32%), Positives = 180/399 (45%), Gaps = 25/399 (6%)
 Frame = +2

Query: 236  MDFSRGVSNQEERDKKIHGSWXXXXXXXXXXXXXXXXTDNRQGNQSGITNRHE-SDRSVE 412
            M+F    S  +  + +  GSW                  N QGNQ G  N  E +  S  
Sbjct: 1    MNFGEEFSIPQGNEFQFTGSWIPVTPQKPIATISNPIPVNGQGNQFGRGNWQELAGFSTG 60

Query: 413  FFQEIPSISNGDAKYLDLMSSLDQSRGVNNWEAALAEKRCSNHIIGSYTPSLQNVTGGWN 592
            + Q+I +  NG  +  + +  + QSR         AE R  N+I G YT  LQN + GWN
Sbjct: 61   YVQDILNY-NGIGQNFNPIEQMCQSRVDYVGSINSAENRMINNIAGPYTQVLQNESTGWN 119

Query: 593  NINPFA-------ASASEMQRGSNNATGSPYSPISYTFSHIDNCWHQRNSENMTLVTXXX 751
            N N  A       A+A     G+ +       PI    S  DN W   +S N        
Sbjct: 120  N-NTLANLPATRNATAFAPANGTASIRRENAVPIPIMHSQADN-WRHSSSHNSMCTNQTH 177

Query: 752  XXXXXXXXXXXCPSQINQYGFHDPYRS-------PRGIADAVSNGTISFRFAPITPEKGE 910
                          Q+ Q+ F  PY+        PR   DA  + T SF+  P   ++ +
Sbjct: 178  STSLHFLRNIDRFYQMPQHDFPVPYKPMYNLNSPPRTEVDAAFHITTSFQSTPAAQDQTK 237

Query: 911  RVDNNQSSKMVNVSVDERLIRDNVHSKGN-------NALEL-QCKESFLQTVVDASSGTI 1066
             + N Q S +   + DE     ++H KG        NA E+ Q     LQ +VD+SS  I
Sbjct: 238  IMGNKQLSTVPASASDE----SSIHEKGKQENLITYNANEVSQHNCELLQNIVDSSSAVI 293

Query: 1067 FNTPLEENRNPEKGEENCIGLNKTPEQKA-KRKKHRPRVVREGKPKRTPK-ATVGRTSTK 1240
             +TP+EE R+ E+G E  I LNKTP+QK  KR+KHRP+V+ EGKPKR PK AT    ++K
Sbjct: 294  -STPVEEKRDSERGSEQGIDLNKTPQQKPPKRRKHRPKVIVEGKPKRNPKPATTKNINSK 352

Query: 1241 ETPAVKRKYVRKKVSNTPANIVGETMDPAHTTAAKSCKR 1357
            E P+ KRKYVR+K     A    ++   +  TAA   KR
Sbjct: 353  ENPSGKRKYVRRKGLTESATEQADSTKKSDPTAATPAKR 391



 Score = 61.2 bits (147), Expect = 2e-06
 Identities = 94/416 (22%), Positives = 151/416 (36%), Gaps = 23/416 (5%)
 Frame = +2

Query: 1193 KPKRTPKATVGRTSTKET-PAVKRKYVRKKVSNTPANIVGETMDPAHTTAAKSCKRALNF 1369
            K   T KA   R S      A KRKYVR+           +  DP+    AKSC+R LNF
Sbjct: 432  KESSTEKADCTRGSDPSAGTAGKRKYVRRNGLRASTGQQVQETDPSAVPVAKSCRRVLNF 491

Query: 1370 NLEGQAADARHETRIHQEGMLHCNVDGSSSRLASRFNSESRAQELCTVVPNSSSGAKTTV 1549
            +LE    +++      QE                R +SES+A  L       +SG KTT+
Sbjct: 492  DLENTGNESQAAIFNRQE------------MQEGRKSSESQAVGLWN---TENSGFKTTL 536

Query: 1550 QLAQGVEVMVEN-SPAGFAFDLNRATTQMLDDYISLXXXXXXXXXXXXXXXXXXXXXEHQ 1726
                  ++++EN  P          +  ML DYIS+                     E +
Sbjct: 537  TTQSSQQMVLENCQPQTEISHTPSLSKMMLIDYISM---PGMPADTASQFQAKDLQMESR 593

Query: 1727 HIHA--LGIGDALCTGRSYANNENAVPSMLQNSVQLISKSQDNSN--------------C 1858
            +++A  + + +A  + +SY+N  +     +       S SQ  SN              C
Sbjct: 594  NVNARHVNMDNADLSQKSYSNGYSPTQQYINPKGMDQSVSQRTSNWENIDGTNELILERC 653

Query: 1859 SQHYK--VADEEQAKGPKRGYCHATETDERQVQSMNMMRANLNSMLVYQAICRENGYHGN 2032
             +     +++  +  G KR +  A E  +       +  A+  S L+ Q + + N  + N
Sbjct: 654  PKSVPTVLSNSSEGMGSKRDHSQAIEQGQ-------LYTASSLSSLLLQGVFQMNEGYRN 706

Query: 2033 NSNLDPHFPEIYKKRRTEKAKNAVLLSTSSGMANVGDGAGKATAQSENNANADHFASQAN 2212
             S     F +  K+++ E    A +     GM+        ++ Q +       F S  +
Sbjct: 707  GSTNGAGFLQALKRKKIEDESQAYIYGMKYGMS-------YSSGQLQTKGTNSEFTSLRD 759

Query: 2213 NNGSASQFNNADGTKNLNYGA---SYSDIYSQSEVAGPNRQVHSIPAEMLSHKEAL 2371
               S  QF  +D       G       D    S  AGP      I +++ S  E L
Sbjct: 760  CGTSDPQFLQSDNIARRKSGGVSELTGDTNVHSTAAGPTSSKKHISSQLHSGMETL 815


>ref|XP_007010229.1| DNA N-glycosylase/DNA-(Apurinic or apyrimidinic site) lyase, putative
            isoform 2 [Theobroma cacao] gi|508727142|gb|EOY19039.1|
            DNA N-glycosylase/DNA-(Apurinic or apyrimidinic site)
            lyase, putative isoform 2 [Theobroma cacao]
          Length = 1999

 Score =  149 bits (375), Expect = 8e-33
 Identities = 131/399 (32%), Positives = 180/399 (45%), Gaps = 25/399 (6%)
 Frame = +2

Query: 236  MDFSRGVSNQEERDKKIHGSWXXXXXXXXXXXXXXXXTDNRQGNQSGITNRHE-SDRSVE 412
            M+F    S  +  + +  GSW                  N QGNQ G  N  E +  S  
Sbjct: 1    MNFGEEFSIPQGNEFQFTGSWIPVTPQKPIATISNPIPVNGQGNQFGRGNWQELAGFSTG 60

Query: 413  FFQEIPSISNGDAKYLDLMSSLDQSRGVNNWEAALAEKRCSNHIIGSYTPSLQNVTGGWN 592
            + Q+I +  NG  +  + +  + QSR         AE R  N+I G YT  LQN + GWN
Sbjct: 61   YVQDILNY-NGIGQNFNPIEQMCQSRVDYVGSINSAENRMINNIAGPYTQVLQNESTGWN 119

Query: 593  NINPFA-------ASASEMQRGSNNATGSPYSPISYTFSHIDNCWHQRNSENMTLVTXXX 751
            N N  A       A+A     G+ +       PI    S  DN W   +S N        
Sbjct: 120  N-NTLANLPATRNATAFAPANGTASIRRENAVPIPIMHSQADN-WRHSSSHNSMCTNQTH 177

Query: 752  XXXXXXXXXXXCPSQINQYGFHDPYRS-------PRGIADAVSNGTISFRFAPITPEKGE 910
                          Q+ Q+ F  PY+        PR   DA  + T SF+  P   ++ +
Sbjct: 178  STSLHFLRNIDRFYQMPQHDFPVPYKPMYNLNSPPRTEVDAAFHITTSFQSTPAAQDQTK 237

Query: 911  RVDNNQSSKMVNVSVDERLIRDNVHSKGN-------NALEL-QCKESFLQTVVDASSGTI 1066
             + N Q S +   + DE     ++H KG        NA E+ Q     LQ +VD+SS  I
Sbjct: 238  IMGNKQLSTVPASASDE----SSIHEKGKQENLITYNANEVSQHNCELLQNIVDSSSAVI 293

Query: 1067 FNTPLEENRNPEKGEENCIGLNKTPEQKA-KRKKHRPRVVREGKPKRTPK-ATVGRTSTK 1240
             +TP+EE R+ E+G E  I LNKTP+QK  KR+KHRP+V+ EGKPKR PK AT    ++K
Sbjct: 294  -STPVEEKRDSERGSEQGIDLNKTPQQKPPKRRKHRPKVIVEGKPKRNPKPATTKNINSK 352

Query: 1241 ETPAVKRKYVRKKVSNTPANIVGETMDPAHTTAAKSCKR 1357
            E P+ KRKYVR+K     A    ++   +  TAA   KR
Sbjct: 353  ENPSGKRKYVRRKGLTESATEQADSTKKSDPTAATPAKR 391



 Score = 61.2 bits (147), Expect = 2e-06
 Identities = 94/416 (22%), Positives = 151/416 (36%), Gaps = 23/416 (5%)
 Frame = +2

Query: 1193 KPKRTPKATVGRTSTKET-PAVKRKYVRKKVSNTPANIVGETMDPAHTTAAKSCKRALNF 1369
            K   T KA   R S      A KRKYVR+           +  DP+    AKSC+R LNF
Sbjct: 432  KESSTEKADCTRGSDPSAGTAGKRKYVRRNGLRASTGQQVQETDPSAVPVAKSCRRVLNF 491

Query: 1370 NLEGQAADARHETRIHQEGMLHCNVDGSSSRLASRFNSESRAQELCTVVPNSSSGAKTTV 1549
            +LE    +++      QE                R +SES+A  L       +SG KTT+
Sbjct: 492  DLENTGNESQAAIFNRQE------------MQEGRKSSESQAVGLWN---TENSGFKTTL 536

Query: 1550 QLAQGVEVMVEN-SPAGFAFDLNRATTQMLDDYISLXXXXXXXXXXXXXXXXXXXXXEHQ 1726
                  ++++EN  P          +  ML DYIS+                     E +
Sbjct: 537  TTQSSQQMVLENCQPQTEISHTPSLSKMMLIDYISM---PGMPADTASQFQAKDLQMESR 593

Query: 1727 HIHA--LGIGDALCTGRSYANNENAVPSMLQNSVQLISKSQDNSN--------------C 1858
            +++A  + + +A  + +SY+N  +     +       S SQ  SN              C
Sbjct: 594  NVNARHVNMDNADLSQKSYSNGYSPTQQYINPKGMDQSVSQRTSNWENIDGTNELILERC 653

Query: 1859 SQHYK--VADEEQAKGPKRGYCHATETDERQVQSMNMMRANLNSMLVYQAICRENGYHGN 2032
             +     +++  +  G KR +  A E  +       +  A+  S L+ Q + + N  + N
Sbjct: 654  PKSVPTVLSNSSEGMGSKRDHSQAIEQGQ-------LYTASSLSSLLLQGVFQMNEGYRN 706

Query: 2033 NSNLDPHFPEIYKKRRTEKAKNAVLLSTSSGMANVGDGAGKATAQSENNANADHFASQAN 2212
             S     F +  K+++ E    A +     GM+        ++ Q +       F S  +
Sbjct: 707  GSTNGAGFLQALKRKKIEDESQAYIYGMKYGMS-------YSSGQLQTKGTNSEFTSLRD 759

Query: 2213 NNGSASQFNNADGTKNLNYGA---SYSDIYSQSEVAGPNRQVHSIPAEMLSHKEAL 2371
               S  QF  +D       G       D    S  AGP      I +++ S  E L
Sbjct: 760  CGTSDPQFLQSDNIARRKSGGVSELTGDTNVHSTAAGPTSSKKHISSQLHSGMETL 815


>ref|XP_007010228.1| DNA N-glycosylase/DNA-(Apurinic or apyrimidinic site) lyase, putative
            isoform 1 [Theobroma cacao] gi|508727141|gb|EOY19038.1|
            DNA N-glycosylase/DNA-(Apurinic or apyrimidinic site)
            lyase, putative isoform 1 [Theobroma cacao]
          Length = 1966

 Score =  149 bits (375), Expect = 8e-33
 Identities = 131/399 (32%), Positives = 180/399 (45%), Gaps = 25/399 (6%)
 Frame = +2

Query: 236  MDFSRGVSNQEERDKKIHGSWXXXXXXXXXXXXXXXXTDNRQGNQSGITNRHE-SDRSVE 412
            M+F    S  +  + +  GSW                  N QGNQ G  N  E +  S  
Sbjct: 1    MNFGEEFSIPQGNEFQFTGSWIPVTPQKPIATISNPIPVNGQGNQFGRGNWQELAGFSTG 60

Query: 413  FFQEIPSISNGDAKYLDLMSSLDQSRGVNNWEAALAEKRCSNHIIGSYTPSLQNVTGGWN 592
            + Q+I +  NG  +  + +  + QSR         AE R  N+I G YT  LQN + GWN
Sbjct: 61   YVQDILNY-NGIGQNFNPIEQMCQSRVDYVGSINSAENRMINNIAGPYTQVLQNESTGWN 119

Query: 593  NINPFA-------ASASEMQRGSNNATGSPYSPISYTFSHIDNCWHQRNSENMTLVTXXX 751
            N N  A       A+A     G+ +       PI    S  DN W   +S N        
Sbjct: 120  N-NTLANLPATRNATAFAPANGTASIRRENAVPIPIMHSQADN-WRHSSSHNSMCTNQTH 177

Query: 752  XXXXXXXXXXXCPSQINQYGFHDPYRS-------PRGIADAVSNGTISFRFAPITPEKGE 910
                          Q+ Q+ F  PY+        PR   DA  + T SF+  P   ++ +
Sbjct: 178  STSLHFLRNIDRFYQMPQHDFPVPYKPMYNLNSPPRTEVDAAFHITTSFQSTPAAQDQTK 237

Query: 911  RVDNNQSSKMVNVSVDERLIRDNVHSKGN-------NALEL-QCKESFLQTVVDASSGTI 1066
             + N Q S +   + DE     ++H KG        NA E+ Q     LQ +VD+SS  I
Sbjct: 238  IMGNKQLSTVPASASDE----SSIHEKGKQENLITYNANEVSQHNCELLQNIVDSSSAVI 293

Query: 1067 FNTPLEENRNPEKGEENCIGLNKTPEQKA-KRKKHRPRVVREGKPKRTPK-ATVGRTSTK 1240
             +TP+EE R+ E+G E  I LNKTP+QK  KR+KHRP+V+ EGKPKR PK AT    ++K
Sbjct: 294  -STPVEEKRDSERGSEQGIDLNKTPQQKPPKRRKHRPKVIVEGKPKRNPKPATTKNINSK 352

Query: 1241 ETPAVKRKYVRKKVSNTPANIVGETMDPAHTTAAKSCKR 1357
            E P+ KRKYVR+K     A    ++   +  TAA   KR
Sbjct: 353  ENPSGKRKYVRRKGLTESATEQADSTKKSDPTAATPAKR 391



 Score = 61.2 bits (147), Expect = 2e-06
 Identities = 94/416 (22%), Positives = 151/416 (36%), Gaps = 23/416 (5%)
 Frame = +2

Query: 1193 KPKRTPKATVGRTSTKET-PAVKRKYVRKKVSNTPANIVGETMDPAHTTAAKSCKRALNF 1369
            K   T KA   R S      A KRKYVR+           +  DP+    AKSC+R LNF
Sbjct: 432  KESSTEKADCTRGSDPSAGTAGKRKYVRRNGLRASTGQQVQETDPSAVPVAKSCRRVLNF 491

Query: 1370 NLEGQAADARHETRIHQEGMLHCNVDGSSSRLASRFNSESRAQELCTVVPNSSSGAKTTV 1549
            +LE    +++      QE                R +SES+A  L       +SG KTT+
Sbjct: 492  DLENTGNESQAAIFNRQE------------MQEGRKSSESQAVGLWN---TENSGFKTTL 536

Query: 1550 QLAQGVEVMVEN-SPAGFAFDLNRATTQMLDDYISLXXXXXXXXXXXXXXXXXXXXXEHQ 1726
                  ++++EN  P          +  ML DYIS+                     E +
Sbjct: 537  TTQSSQQMVLENCQPQTEISHTPSLSKMMLIDYISM---PGMPADTASQFQAKDLQMESR 593

Query: 1727 HIHA--LGIGDALCTGRSYANNENAVPSMLQNSVQLISKSQDNSN--------------C 1858
            +++A  + + +A  + +SY+N  +     +       S SQ  SN              C
Sbjct: 594  NVNARHVNMDNADLSQKSYSNGYSPTQQYINPKGMDQSVSQRTSNWENIDGTNELILERC 653

Query: 1859 SQHYK--VADEEQAKGPKRGYCHATETDERQVQSMNMMRANLNSMLVYQAICRENGYHGN 2032
             +     +++  +  G KR +  A E  +       +  A+  S L+ Q + + N  + N
Sbjct: 654  PKSVPTVLSNSSEGMGSKRDHSQAIEQGQ-------LYTASSLSSLLLQGVFQMNEGYRN 706

Query: 2033 NSNLDPHFPEIYKKRRTEKAKNAVLLSTSSGMANVGDGAGKATAQSENNANADHFASQAN 2212
             S     F +  K+++ E    A +     GM+        ++ Q +       F S  +
Sbjct: 707  GSTNGAGFLQALKRKKIEDESQAYIYGMKYGMS-------YSSGQLQTKGTNSEFTSLRD 759

Query: 2213 NNGSASQFNNADGTKNLNYGA---SYSDIYSQSEVAGPNRQVHSIPAEMLSHKEAL 2371
               S  QF  +D       G       D    S  AGP      I +++ S  E L
Sbjct: 760  CGTSDPQFLQSDNIARRKSGGVSELTGDTNVHSTAAGPTSSKKHISSQLHSGMETL 815


>dbj|BAF52857.1| repressor of silencing 2b [Nicotiana tabacum]
          Length = 1673

 Score =  147 bits (370), Expect = 3e-32
 Identities = 172/602 (28%), Positives = 235/602 (39%), Gaps = 49/602 (8%)
 Frame = +2

Query: 830  SPRGIADAVSNGTISFRFAPITPE--KGERVDNNQSSKMVNVSVDERLIRDNVHS-KGNN 1000
            SP  + DA+ +  + F+F P+TP+  K  R  +N S+  +NV+   R ++ N  + K   
Sbjct: 184  SPLRMTDAILSN-VPFKFGPVTPDLIKSTRQASNASNLDINVTTLPRGVQSNEDTIKRTE 242

Query: 1001 ALELQCKESFLQTVVDASSGTIFNTPLEENRNPEKGEENCIGLNKTPEQKAKRKKHRPRV 1180
            A ELQ      + V++ S        L+EN   +   +    LN TPEQK +R+KHRP+V
Sbjct: 243  ANELQQSREQSELVLNQSE-------LQENHKLDMEGKQDSELNNTPEQKQRRRKHRPKV 295

Query: 1181 VREGKPKRTPKATV---------------------------------------GRT-STK 1240
            V EGKPKRTPK                                          G+T S+K
Sbjct: 296  VVEGKPKRTPKRRTEKQPGSVETKTEKRKYVRRNKVGSPAPTSAEEVNNTIDEGKTPSSK 355

Query: 1241 ETPAVKRKYVR----KKVSNTPANI-VGETMDPAHTT-AAKSCKRALNFNLEGQAADARH 1402
            ETP  KRKYVR    KK +  P+    G T +P   +   KSC+R LNF  E QA+D   
Sbjct: 356  ETPPAKRKYVRRNQVKKSTEKPSEEGNGGTTEPKKVSLPRKSCRRTLNFEFERQASDENS 415

Query: 1403 ETRIHQEGMLHCNVDGSSSRLASRFNSESRAQELCTVVPNSSSGAKTTVQLAQGVEVMVE 1582
              R      LH N             +ES AQ               + QL QGVE   E
Sbjct: 416  SYRSSTLD-LHAN------------QTESTAQ------------CVQSAQLGQGVEAPNE 450

Query: 1583 NSPAGFAFDLNRATTQMLDDYISLXXXXXXXXXXXXXXXXXXXXXEHQHIHALGIGDALC 1762
             +  G  +++N +  Q L +Y+S                       H  +  +G  +   
Sbjct: 451  KTAVGTTYNINCSLNQELRNYLS-----QHEVQYLGSPSLDKVGWNHDKV-IVGNQNEST 504

Query: 1763 TGRSYANNENAVPSMLQNSVQLISKSQDNSNCSQHYKVADEEQAKGPKRGYCHATETDER 1942
             G    N  +       + VQ+  +S + SNCS    +      KG KR   H+  TDE 
Sbjct: 505  RGNYRINFSDLTRDKQASIVQMTPQSPNCSNCSSSTCL---PHGKGLKRQ--HSYRTDEA 559

Query: 1943 QVQSMNMMRANLNSMLVYQAICRENGYHGNNSNLDPHFPEIYKKRRTEKAKNAVLLSTSS 2122
            Q  S+N      NSM  YQAI   N      SNL  H P IYKK+RTE+  ++       
Sbjct: 560  QFYSLNARGVYFNSMQAYQAILPANEPE-VYSNLGMHCPAIYKKKRTEEGHSSAAFYIK- 617

Query: 2123 GMANVGDGAGKATAQSENNANADHFASQANNNGSASQFNNADGTKNLNYGASYSDIYSQS 2302
                                   HF S+ N   S                       SQ 
Sbjct: 618  -----------------------HFTSKINCVPS-----------------------SQC 631

Query: 2303 EVAGPNRQVHSIPAEMLSHKEALSRASLGILQAPKFIQTFGQTERKTKRRSKGPTQVHNL 2482
             ++G        P+   S   A +R     LQ   F+    + E+  KRRSKG TQVH L
Sbjct: 632  NISGS-------PSNNSSTNIAYNR-----LQNSDFVPAVVEAEKLRKRRSKGATQVHEL 679

Query: 2483 AS 2488
            AS
Sbjct: 680  AS 681


>dbj|BAF52856.1| repressor of silencing 2a [Nicotiana tabacum]
          Length = 1673

 Score =  146 bits (369), Expect = 4e-32
 Identities = 172/602 (28%), Positives = 235/602 (39%), Gaps = 49/602 (8%)
 Frame = +2

Query: 830  SPRGIADAVSNGTISFRFAPITPE--KGERVDNNQSSKMVNVSVDERLIRDNVHS-KGNN 1000
            SP  + DA+ +  + F+F P+TP+  K  R  +N S+  +NV+   R ++ N  + K   
Sbjct: 184  SPLRMTDAILSN-VPFKFEPVTPDLIKSTRQASNASNLDINVTTLPRGVQSNEDTIKRTE 242

Query: 1001 ALELQCKESFLQTVVDASSGTIFNTPLEENRNPEKGEENCIGLNKTPEQKAKRKKHRPRV 1180
            A ELQ      + V++ S        L+EN   +   +    LN TPEQK +R+KHRP+V
Sbjct: 243  ANELQQSREQSELVLNQSE-------LQENHKLDMEGKQDSELNNTPEQKQRRRKHRPKV 295

Query: 1181 VREGKPKRTPKATV---------------------------------------GRT-STK 1240
            V EGKPKRTPK                                          G+T S+K
Sbjct: 296  VVEGKPKRTPKRRTEKQPGSVETKTEKRKYVRRNKVGSPAPTSAEEVNNTIDEGKTPSSK 355

Query: 1241 ETPAVKRKYVR----KKVSNTPANI-VGETMDPAHTT-AAKSCKRALNFNLEGQAADARH 1402
            ETP  KRKYVR    KK +  P+    G T +P   +   KSC+R LNF  E QA+D   
Sbjct: 356  ETPPAKRKYVRRNQVKKSTEKPSEEGNGGTTEPKKVSLPRKSCRRTLNFEFERQASDENS 415

Query: 1403 ETRIHQEGMLHCNVDGSSSRLASRFNSESRAQELCTVVPNSSSGAKTTVQLAQGVEVMVE 1582
              R      LH N             +ES AQ               + QL QGVE   E
Sbjct: 416  SYRSSTLD-LHAN------------QTESTAQ------------CVQSAQLGQGVEAPNE 450

Query: 1583 NSPAGFAFDLNRATTQMLDDYISLXXXXXXXXXXXXXXXXXXXXXEHQHIHALGIGDALC 1762
             +  G  +++N +  Q L +Y+S                       H  +  +G  +   
Sbjct: 451  KTAVGTTYNINCSLNQELRNYLS-----QHEVQYLGSPSLDKVGWNHDKV-IVGNQNEST 504

Query: 1763 TGRSYANNENAVPSMLQNSVQLISKSQDNSNCSQHYKVADEEQAKGPKRGYCHATETDER 1942
             G    N  +       + VQ+  +S + SNCS    +      KG KR   H+  TDE 
Sbjct: 505  RGNYRINFSDLTRDKQASIVQMTPQSPNCSNCSSSTCL---PHGKGLKRQ--HSYRTDEA 559

Query: 1943 QVQSMNMMRANLNSMLVYQAICRENGYHGNNSNLDPHFPEIYKKRRTEKAKNAVLLSTSS 2122
            Q  S+N      NSM  YQAI   N      SNL  H P IYKK+RTE+  ++       
Sbjct: 560  QFYSLNARGVYFNSMQAYQAILPANEPE-VYSNLGMHCPAIYKKKRTEEGHSSAAFYIK- 617

Query: 2123 GMANVGDGAGKATAQSENNANADHFASQANNNGSASQFNNADGTKNLNYGASYSDIYSQS 2302
                                   HF S+ N   S                       SQ 
Sbjct: 618  -----------------------HFTSKINCVPS-----------------------SQC 631

Query: 2303 EVAGPNRQVHSIPAEMLSHKEALSRASLGILQAPKFIQTFGQTERKTKRRSKGPTQVHNL 2482
             ++G        P+   S   A +R     LQ   F+    + E+  KRRSKG TQVH L
Sbjct: 632  NISGS-------PSNNSSTNIAYNR-----LQNSDFVPAVVEAEKLRKRRSKGATQVHEL 679

Query: 2483 AS 2488
            AS
Sbjct: 680  AS 681


>ref|XP_006492175.1| PREDICTED: transcriptional activator DEMETER-like isoform X3 [Citrus
            sinensis]
          Length = 1958

 Score =  144 bits (362), Expect = 3e-31
 Identities = 191/787 (24%), Positives = 299/787 (37%), Gaps = 87/787 (11%)
 Frame = +2

Query: 236  MDFSRGVSNQEERDKKIHGSWXXXXXXXXXXXXXXXXTDNRQGNQSGITNRHE-SDRSVE 412
            M F  G     E++ ++ G W                  +R     G  N  E +     
Sbjct: 1    MKFGDGFPIPREKEFQLMGPWMPVTPEKPIATRSNPQQVDRYAESQGRANWRELAGFPGG 60

Query: 413  FFQEIPSISNGDAKYLDLMSSLDQSRGVNNWEAALAEK-RCSNHIIGSYTPSLQNVTGGW 589
              QE P+  N     L  +    Q+ G N     + ++ R  NHI  S+   L N  GGW
Sbjct: 61   HIQETPNY-NRAVPNLSPIGQGGQTEGYNGGNMRVTDRQRIINHIAASFRQDLYNEDGGW 119

Query: 590  --NNINPFAA---------------------SASEMQRGSNNATGSPYSPISYTFSHID- 697
              N + P  A                     + S++    + A     S +S+   H   
Sbjct: 120  NNNQLGPMLARTNAAALTSANRNVVLSAGMVNRSQLLNSHSQANKWGESSLSHLLLHNQT 179

Query: 698  -----------NCWHQR------------NSENMTLVTXXXXXXXXXXXXXXCPSQINQY 808
                       N +HQ             NS+                       Q  QY
Sbjct: 180  QNSGSNLLRNTNNFHQMPRAPYSGSDMLLNSDIFYQTPQAHHSGLNLLQNGDSFHQTPQY 239

Query: 809  GFHDPY-------RSPRGIADAVSNGTISFRFAPITPEKGERVDNNQSSKMVNVSVDERL 967
            GF   Y        S R  ADA  + T +  F+P+TP+  ++ +NNQ S+  N+      
Sbjct: 240  GFPVTYLPNYKQNSSSREEADAALSVTAALPFSPVTPDPLKKWENNQFSRKENLPTAGNS 299

Query: 968  IRDN------VHSKGNNALELQCKESFLQTVVDASSGTIFNTPLEENRNPEKGEENCIGL 1129
              +       V S GN  ++    E  LQ VV +    I +TPLEE R+ E      I L
Sbjct: 300  PAEKDKQWHLVTSIGNETIQHNHHE-ILQNVVPSE---IISTPLEEKRDSENISNEGIDL 355

Query: 1130 NKTPEQKA-KRKKHRPRVVREGKPKRTPKATVGRTSTKETPAVKRKYVRKK----VSNTP 1294
            NKTP+QK  KR+KHRP+VV+EGKP+ TPKA    T  +  P  KRKYVR+K     +   
Sbjct: 356  NKTPQQKPPKRRKHRPKVVKEGKPRGTPKA---ETPKRANPGGKRKYVRRKGREESATQK 412

Query: 1295 ANIVGETMDPAHTTAAKSCKRALNFNLEGQAADARHETRIHQEGM-------LHCNVDGS 1453
            A+I+ ET D +   A +SC+R LNF+LE    +++ E    Q  M       L+ N+D  
Sbjct: 413  ADIIRETTDASARLAERSCRRELNFDLENPVDESQIEVIGEQAEMQQSYKRTLNLNLDFQ 472

Query: 1454 SSRLASRFNSESRAQELCTV-----------VPNSSSGAKTTVQLAQGVEVMVENSPAGF 1600
            ++ + SR NS  RA+    +            P + +   + V        M E  P   
Sbjct: 473  TTEMDSRTNSGGRAKLTLPIDQHKGLPTKNQQPGTDNSDTSMVNEIPAYMSMQEMQPVA- 531

Query: 1601 AFDLNRATTQMLDDYISLXXXXXXXXXXXXXXXXXXXXXEHQHIHALGIGDALCTGRSYA 1780
            A    R    M +  ++                        QH  A GIG   C      
Sbjct: 532  ASQPPRKDRHMENLKVNQSNIDTSIADPFQQSHRTGYTRIQQHTSAKGIGHTFCPEND-- 589

Query: 1781 NNENAVPSMLQNSVQLISKSQDNSNCSQHYKVADEEQAKGPKRGYCHATETDERQVQSMN 1960
            N EN     L  + QL+++    S  S  +     ++  G KR Y HA    + Q  ++N
Sbjct: 590  NFEN-----LGRTRQLMTQRSLQSAPSTSF---SSKEVGGSKRLYSHA--MGQMQPYAVN 639

Query: 1961 MMRANLNSMLVYQAICRENGYHGNNSNLDPHFPEIYKKRRTEKAKNAVLLSTSSGMANVG 2140
            +   +     + Q + + +G H N         E +KK++ +     ++     G+  V 
Sbjct: 640  VTGLS----YLNQNMVQIDGCHRNTCMQGADCLETHKKKKIDNELLTIITGKPPGITAVQ 695

Query: 2141 DGAGKATAQSENNANADHFASQANNN--GSASQFNNADGTKNLNYGASYSDIYSQSEVAG 2314
            DG+ +  ++  ++   + F  QA+ +   S  + +N    +   Y   + D  +QS  + 
Sbjct: 696  DGSKQTQSKIVSDVRGNGFMYQAHYDILKSCLRSSNISSREQSGYNKLFFDWNTQSMASN 755

Query: 2315 PNRQVHS 2335
              +Q +S
Sbjct: 756  MPKQHNS 762


>ref|XP_002528585.1| Protein ROS1, putative [Ricinus communis] gi|223531981|gb|EEF33793.1|
            Protein ROS1, putative [Ricinus communis]
          Length = 1634

 Score =  142 bits (359), Expect = 6e-31
 Identities = 159/604 (26%), Positives = 240/604 (39%), Gaps = 34/604 (5%)
 Frame = +2

Query: 797  INQYGFHDPYRSPRGIADAVSNGTISFRFAPITPEKGERVDNNQSSKMVNVSVDERLIRD 976
            I Q   +D    P G A   ++ T S + AP+TPEKG RV+  Q +++   S DER    
Sbjct: 110  ILQGSAYDLNLPPGGTAVTFTSKT-SCQIAPMTPEKGTRVECRQVAQLQFFSADER---- 164

Query: 977  NVHSKGNNALELQCKESFLQTVVDASSGTIFNTPLEEN--RNPEKGEENCIGLNKTPEQK 1150
              + +GN   +     SF             N P  +N  +  EK   + I L++TPEQK
Sbjct: 165  -ANQEGNEQDDQVAMVSF-----------DINRPQTDNELQKTEKEGSHVINLSETPEQK 212

Query: 1151 AKRKKHRPRVVREGKPKRTPKATVGRTSTKETPAVKRKYVRK------------------ 1276
             +RKKHRP+V+ EGKP+    AT       E P  KRKYVRK                  
Sbjct: 213  PRRKKHRPKVITEGKPRPRKPATPKHALNTERPTGKRKYVRKKPLSKAPTTNLAVSTEIP 272

Query: 1277 -------------KVSNTPANIVGETMDPAHT-TAAKSCKRALNFNLEGQAADARHETRI 1414
                         K+S  P    G+++       A KSC+R+LNF  EGQ  D       
Sbjct: 273  AGKRKYVRRKPLNKISTPPVEATGKSVSTISVEPAKKSCRRSLNFYTEGQPRD------- 325

Query: 1415 HQEGMLHCNVDGSSSRLASRFNSESRAQELCTVVPNSSSGAKTTVQLAQGVEVMVENSPA 1594
                      + S  +L S  +S+ +A ++        + +K+ V +  G+EV+VE +  
Sbjct: 326  ----------NNSKCKLNSDEDSQLQAHDV-----GEGNQSKSIVTVGNGIEVIVETTQT 370

Query: 1595 GFAFDLNRATTQMLDDYISLXXXXXXXXXXXXXXXXXXXXXEHQHIHALGIGDALCTGRS 1774
            G A+DLN +  Q L DY++L                      +    +    +   T  +
Sbjct: 371  GIAYDLNHSVNQKLQDYLALPEKQAPSTPVYANIDPARRIRNNNSQESPAEREGQVT--T 428

Query: 1775 YANNENAVPSMLQNSVQLISKSQDNSNCSQHYKVADEEQAKGPKRGYCHATETDERQVQS 1954
            ++  +NA  SMLQ   QL   + ++S C ++  +  E Q+ G KR      +  +    +
Sbjct: 429  HSVQQNAAQSMLQTDNQLPPINPNDSICGKYTTLTMEGQSNGSKRKVFSCIQ--QPGTCN 486

Query: 1955 MNMMRANLNSMLVYQAICRENGYHGNNSNLDPHFPEIYKKRRTEKAKNAVLLSTSSGMAN 2134
             N+     N++  YQA              +   P  +KKRRTEKA  A   S S     
Sbjct: 487  TNLTGIFCNALPQYQA------------TSEFQVPSNFKKRRTEKAHIATTCSISCSTTL 534

Query: 2135 VGDGAGKATAQSENNANADHFASQANNNGSASQFNNADGTKNLNYGASYSDIYSQSEVAG 2314
             G                D    Q NN G     +      +    AS+S   +   + G
Sbjct: 535  SG------------TLRLDIPGPQKNNRG-----DPPTSIVDCLLPASHS---NADRIPG 574

Query: 2315 PNRQVHSIPAEMLSHKEALSRASLGILQAPKFIQTFGQTERKTKRRSKGPTQVHNLASPT 2494
               + +            L   + G + A        QTER TK+RS+G T+  +LAS T
Sbjct: 575  AFGETNGC---------QLKNETSGCVLA--------QTERSTKKRSRGHTRTRDLASLT 617

Query: 2495 ANAE 2506
              A+
Sbjct: 618  KIAQ 621


>ref|XP_007010230.1| DNA N-glycosylase/DNA-(Apurinic or apyrimidinic site) lyase, putative
            isoform 3 [Theobroma cacao]
            gi|590566430|ref|XP_007010231.1| DNA
            N-glycosylase/DNA-(Apurinic or apyrimidinic site) lyase,
            putative isoform 3 [Theobroma cacao]
            gi|508727143|gb|EOY19040.1| DNA
            N-glycosylase/DNA-(Apurinic or apyrimidinic site) lyase,
            putative isoform 3 [Theobroma cacao]
            gi|508727144|gb|EOY19041.1| DNA
            N-glycosylase/DNA-(Apurinic or apyrimidinic site) lyase,
            putative isoform 3 [Theobroma cacao]
          Length = 1979

 Score =  142 bits (357), Expect = 1e-30
 Identities = 128/398 (32%), Positives = 180/398 (45%), Gaps = 24/398 (6%)
 Frame = +2

Query: 236  MDFSRGVSNQEERDKKIHGSWXXXXXXXXXXXXXXXXTDNRQGNQSGITNRHE-SDRSVE 412
            M+F    S  +  + +  GSW                  N QGNQ G  N  E +  S  
Sbjct: 1    MNFGEEFSIPQGNEFQFTGSWIPVTPQKPIATISNPIPVNGQGNQFGRGNWQELAGFSTG 60

Query: 413  FFQEIPSISNGDAKYLDLMSSLDQSRGVNNWEAALAEKRCSNHIIGSYTPSLQNVTGGWN 592
            + Q+I +  NG  +  + +  + QSR         AE R  N+I G YT  LQN + GWN
Sbjct: 61   YVQDILNY-NGIGQNFNPIEQMCQSRVDYVGSINSAENRMINNIAGPYTQVLQNESTGWN 119

Query: 593  NINPFA-------ASASEMQRGSNNATGSPYSPISYTFSHIDNCWHQRNSENMTLVTXXX 751
            N N  A       A+A     G+ +       PI    S  DN  H  +  +M       
Sbjct: 120  N-NTLANLPATRNATAFAPANGTASIRRENAVPIPIMHSQADNWRHSSSHNSM------- 171

Query: 752  XXXXXXXXXXXCPSQINQYGFHDP------YRSPRGIADAVSNGTISFRFAPITPEKGER 913
                       C +Q +    H        Y+ P+ + DA  + T SF+  P   ++ + 
Sbjct: 172  -----------CTNQTHSTSLHFLRNIDRFYQMPQQV-DAAFHITTSFQSTPAAQDQTKI 219

Query: 914  VDNNQSSKMVNVSVDERLIRDNVHSKGN-------NALEL-QCKESFLQTVVDASSGTIF 1069
            + N Q S +   + DE     ++H KG        NA E+ Q     LQ +VD+SS  I 
Sbjct: 220  MGNKQLSTVPASASDE----SSIHEKGKQENLITYNANEVSQHNCELLQNIVDSSSAVI- 274

Query: 1070 NTPLEENRNPEKGEENCIGLNKTPEQKA-KRKKHRPRVVREGKPKRTPK-ATVGRTSTKE 1243
            +TP+EE R+ E+G E  I LNKTP+QK  KR+KHRP+V+ EGKPKR PK AT    ++KE
Sbjct: 275  STPVEEKRDSERGSEQGIDLNKTPQQKPPKRRKHRPKVIVEGKPKRNPKPATTKNINSKE 334

Query: 1244 TPAVKRKYVRKKVSNTPANIVGETMDPAHTTAAKSCKR 1357
             P+ KRKYVR+K     A    ++   +  TAA   KR
Sbjct: 335  NPSGKRKYVRRKGLTESATEQADSTKKSDPTAATPAKR 372



 Score = 61.2 bits (147), Expect = 2e-06
 Identities = 94/416 (22%), Positives = 151/416 (36%), Gaps = 23/416 (5%)
 Frame = +2

Query: 1193 KPKRTPKATVGRTSTKET-PAVKRKYVRKKVSNTPANIVGETMDPAHTTAAKSCKRALNF 1369
            K   T KA   R S      A KRKYVR+           +  DP+    AKSC+R LNF
Sbjct: 413  KESSTEKADCTRGSDPSAGTAGKRKYVRRNGLRASTGQQVQETDPSAVPVAKSCRRVLNF 472

Query: 1370 NLEGQAADARHETRIHQEGMLHCNVDGSSSRLASRFNSESRAQELCTVVPNSSSGAKTTV 1549
            +LE    +++      QE                R +SES+A  L       +SG KTT+
Sbjct: 473  DLENTGNESQAAIFNRQE------------MQEGRKSSESQAVGLWN---TENSGFKTTL 517

Query: 1550 QLAQGVEVMVEN-SPAGFAFDLNRATTQMLDDYISLXXXXXXXXXXXXXXXXXXXXXEHQ 1726
                  ++++EN  P          +  ML DYIS+                     E +
Sbjct: 518  TTQSSQQMVLENCQPQTEISHTPSLSKMMLIDYISM---PGMPADTASQFQAKDLQMESR 574

Query: 1727 HIHA--LGIGDALCTGRSYANNENAVPSMLQNSVQLISKSQDNSN--------------C 1858
            +++A  + + +A  + +SY+N  +     +       S SQ  SN              C
Sbjct: 575  NVNARHVNMDNADLSQKSYSNGYSPTQQYINPKGMDQSVSQRTSNWENIDGTNELILERC 634

Query: 1859 SQHYK--VADEEQAKGPKRGYCHATETDERQVQSMNMMRANLNSMLVYQAICRENGYHGN 2032
             +     +++  +  G KR +  A E  +       +  A+  S L+ Q + + N  + N
Sbjct: 635  PKSVPTVLSNSSEGMGSKRDHSQAIEQGQ-------LYTASSLSSLLLQGVFQMNEGYRN 687

Query: 2033 NSNLDPHFPEIYKKRRTEKAKNAVLLSTSSGMANVGDGAGKATAQSENNANADHFASQAN 2212
             S     F +  K+++ E    A +     GM+        ++ Q +       F S  +
Sbjct: 688  GSTNGAGFLQALKRKKIEDESQAYIYGMKYGMS-------YSSGQLQTKGTNSEFTSLRD 740

Query: 2213 NNGSASQFNNADGTKNLNYGA---SYSDIYSQSEVAGPNRQVHSIPAEMLSHKEAL 2371
               S  QF  +D       G       D    S  AGP      I +++ S  E L
Sbjct: 741  CGTSDPQFLQSDNIARRKSGGVSELTGDTNVHSTAAGPTSSKKHISSQLHSGMETL 796


>ref|XP_007027613.1| Repressor of gene silencing 1 isoform 3 [Theobroma cacao]
            gi|508716218|gb|EOY08115.1| Repressor of gene silencing 1
            isoform 3 [Theobroma cacao]
          Length = 1728

 Score =  141 bits (355), Expect = 2e-30
 Identities = 147/583 (25%), Positives = 240/583 (41%), Gaps = 47/583 (8%)
 Frame = +2

Query: 881  FAPITPEKGERVDNNQSSKMVNVSVDERLIRDNVHSKGNNALEL------QCKESFLQTV 1042
            FAPITP+K  R + N+  ++ N+ ++ +            A         QC +   + V
Sbjct: 202  FAPITPDKATRAERNEDLEIENLYIENKTTEQREEQANELAAARVDVNGSQCSKELQKPV 261

Query: 1043 VDASSGTIFNTPLEENRNPEKGEENCIGLNKTPEQKAKRKKHRPRVVREGKPKRTPKATV 1222
             ++S   I   P +E +NP+ G  N + L++TP+QK +RKKHRP+V+ EGKP++  K   
Sbjct: 262  TESSLAAI---PTKEIQNPDNGGSNLVDLDRTPQQKQRRKKHRPKVITEGKPRKISKPVT 318

Query: 1223 GRTS-TKETPAVKRKYVRKKVSNTPANI-------------------------------- 1303
             + S ++E P  KRKYVRK   N   +I                                
Sbjct: 319  PKPSGSQENPTGKRKYVRKNRLNKDTSISPGEANGENSTRKRKYVRRKGLDKNSMIPTEE 378

Query: 1304 -VGETMDPAHTTA--AKSCKRALNFNLEGQAADARHETRIHQEGMLHCNVDGSSSRLASR 1474
             +GE      T     KSC+R L+F++EGQ           ++G      +  + + A  
Sbjct: 379  EIGEGATHPETLKHNKKSCRRVLDFDMEGQ-----------EKG------ESYACKSACN 421

Query: 1475 FNSESRAQELCTVVPNSSSGAKTTVQLAQGVEVMVENSPAGFAFDLNRATTQMLDDYISL 1654
             NS S  + L        S +K+T+Q+  G+EV VEN+  G A++L         DYISL
Sbjct: 422  LNSSSGTENL----GKGGSQSKSTMQICGGIEVAVENTQTGIAYELK--------DYISL 469

Query: 1655 XXXXXXXXXXXXXXXXXXXXXEHQHIHALGIGDALCTGRSYANNENAV----PSMLQNSV 1822
                                   +H H+  + +    G+  A   + +     ++LQ+  
Sbjct: 470  ---PEDQAPGTPLLTKNNPPRRRRHTHSQKLNN--MKGKDQATAHDGLRKNGQTVLQSDD 524

Query: 1823 QLISKSQDNSNCSQHYKVADEEQAKGPKRGYCHAT-ETDERQVQSMNMMRANLNSMLVYQ 1999
            QL ++S +NSNCS    V +  QA   K     AT + D   V S     ++ N++ +YQ
Sbjct: 525  QLPARSPNNSNCSSS-SVLERGQASELKTNNSSATQQADSSTVISYG---SHYNNLCIYQ 580

Query: 2000 AICRENGYHGNNSNLDPHFPEIYKKRRTEKAKNAVLLSTSSGMANVGDGAGKATAQSENN 2179
             I                F  I++++RTEK +N+   STSS +      A K+   +E  
Sbjct: 581  MI------------PGMQFSNIHRRKRTEKGQNSATSSTSSSIT-----AAKSLVAAE-- 621

Query: 2180 ANADHFASQANNNGSASQFNNADGTKNLNYGASYSDIYSQSEVAGPNRQVHSIPAEMLSH 2359
                      N   +  QF ++                              +PA++   
Sbjct: 622  -----ACPVDNIQVNPHQFTSS-----------------------------GVPAKI--- 644

Query: 2360 KEALSRASLGILQAPKFIQTFGQTERKTKRRSKGPTQVHNLAS 2488
            +EA  + S+ +      I    QT+   K+R++G T+V +LAS
Sbjct: 645  QEAGRKFSMEVSPTFNCIMALSQTDGLKKKRTRGATRVRDLAS 687


>ref|XP_007027612.1| Repressor of gene silencing 1 isoform 2 [Theobroma cacao]
            gi|508716217|gb|EOY08114.1| Repressor of gene silencing 1
            isoform 2 [Theobroma cacao]
          Length = 1885

 Score =  141 bits (355), Expect = 2e-30
 Identities = 147/583 (25%), Positives = 240/583 (41%), Gaps = 47/583 (8%)
 Frame = +2

Query: 881  FAPITPEKGERVDNNQSSKMVNVSVDERLIRDNVHSKGNNALEL------QCKESFLQTV 1042
            FAPITP+K  R + N+  ++ N+ ++ +            A         QC +   + V
Sbjct: 202  FAPITPDKATRAERNEDLEIENLYIENKTTEQREEQANELAAARVDVNGSQCSKELQKPV 261

Query: 1043 VDASSGTIFNTPLEENRNPEKGEENCIGLNKTPEQKAKRKKHRPRVVREGKPKRTPKATV 1222
             ++S   I   P +E +NP+ G  N + L++TP+QK +RKKHRP+V+ EGKP++  K   
Sbjct: 262  TESSLAAI---PTKEIQNPDNGGSNLVDLDRTPQQKQRRKKHRPKVITEGKPRKISKPVT 318

Query: 1223 GRTS-TKETPAVKRKYVRKKVSNTPANI-------------------------------- 1303
             + S ++E P  KRKYVRK   N   +I                                
Sbjct: 319  PKPSGSQENPTGKRKYVRKNRLNKDTSISPGEANGENSTRKRKYVRRKGLDKNSMIPTEE 378

Query: 1304 -VGETMDPAHTTA--AKSCKRALNFNLEGQAADARHETRIHQEGMLHCNVDGSSSRLASR 1474
             +GE      T     KSC+R L+F++EGQ           ++G      +  + + A  
Sbjct: 379  EIGEGATHPETLKHNKKSCRRVLDFDMEGQ-----------EKG------ESYACKSACN 421

Query: 1475 FNSESRAQELCTVVPNSSSGAKTTVQLAQGVEVMVENSPAGFAFDLNRATTQMLDDYISL 1654
             NS S  + L        S +K+T+Q+  G+EV VEN+  G A++L         DYISL
Sbjct: 422  LNSSSGTENL----GKGGSQSKSTMQICGGIEVAVENTQTGIAYELK--------DYISL 469

Query: 1655 XXXXXXXXXXXXXXXXXXXXXEHQHIHALGIGDALCTGRSYANNENAV----PSMLQNSV 1822
                                   +H H+  + +    G+  A   + +     ++LQ+  
Sbjct: 470  ---PEDQAPGTPLLTKNNPPRRRRHTHSQKLNN--MKGKDQATAHDGLRKNGQTVLQSDD 524

Query: 1823 QLISKSQDNSNCSQHYKVADEEQAKGPKRGYCHAT-ETDERQVQSMNMMRANLNSMLVYQ 1999
            QL ++S +NSNCS    V +  QA   K     AT + D   V S     ++ N++ +YQ
Sbjct: 525  QLPARSPNNSNCSSS-SVLERGQASELKTNNSSATQQADSSTVISYG---SHYNNLCIYQ 580

Query: 2000 AICRENGYHGNNSNLDPHFPEIYKKRRTEKAKNAVLLSTSSGMANVGDGAGKATAQSENN 2179
             I                F  I++++RTEK +N+   STSS +      A K+   +E  
Sbjct: 581  MI------------PGMQFSNIHRRKRTEKGQNSATSSTSSSIT-----AAKSLVAAE-- 621

Query: 2180 ANADHFASQANNNGSASQFNNADGTKNLNYGASYSDIYSQSEVAGPNRQVHSIPAEMLSH 2359
                      N   +  QF ++                              +PA++   
Sbjct: 622  -----ACPVDNIQVNPHQFTSS-----------------------------GVPAKI--- 644

Query: 2360 KEALSRASLGILQAPKFIQTFGQTERKTKRRSKGPTQVHNLAS 2488
            +EA  + S+ +      I    QT+   K+R++G T+V +LAS
Sbjct: 645  QEAGRKFSMEVSPTFNCIMALSQTDGLKKKRTRGATRVRDLAS 687


>ref|XP_007027611.1| Repressor of gene silencing 1 isoform 1 [Theobroma cacao]
            gi|508716216|gb|EOY08113.1| Repressor of gene silencing 1
            isoform 1 [Theobroma cacao]
          Length = 1922

 Score =  141 bits (355), Expect = 2e-30
 Identities = 147/583 (25%), Positives = 240/583 (41%), Gaps = 47/583 (8%)
 Frame = +2

Query: 881  FAPITPEKGERVDNNQSSKMVNVSVDERLIRDNVHSKGNNALEL------QCKESFLQTV 1042
            FAPITP+K  R + N+  ++ N+ ++ +            A         QC +   + V
Sbjct: 202  FAPITPDKATRAERNEDLEIENLYIENKTTEQREEQANELAAARVDVNGSQCSKELQKPV 261

Query: 1043 VDASSGTIFNTPLEENRNPEKGEENCIGLNKTPEQKAKRKKHRPRVVREGKPKRTPKATV 1222
             ++S   I   P +E +NP+ G  N + L++TP+QK +RKKHRP+V+ EGKP++  K   
Sbjct: 262  TESSLAAI---PTKEIQNPDNGGSNLVDLDRTPQQKQRRKKHRPKVITEGKPRKISKPVT 318

Query: 1223 GRTS-TKETPAVKRKYVRKKVSNTPANI-------------------------------- 1303
             + S ++E P  KRKYVRK   N   +I                                
Sbjct: 319  PKPSGSQENPTGKRKYVRKNRLNKDTSISPGEANGENSTRKRKYVRRKGLDKNSMIPTEE 378

Query: 1304 -VGETMDPAHTTA--AKSCKRALNFNLEGQAADARHETRIHQEGMLHCNVDGSSSRLASR 1474
             +GE      T     KSC+R L+F++EGQ           ++G      +  + + A  
Sbjct: 379  EIGEGATHPETLKHNKKSCRRVLDFDMEGQ-----------EKG------ESYACKSACN 421

Query: 1475 FNSESRAQELCTVVPNSSSGAKTTVQLAQGVEVMVENSPAGFAFDLNRATTQMLDDYISL 1654
             NS S  + L        S +K+T+Q+  G+EV VEN+  G A++L         DYISL
Sbjct: 422  LNSSSGTENL----GKGGSQSKSTMQICGGIEVAVENTQTGIAYELK--------DYISL 469

Query: 1655 XXXXXXXXXXXXXXXXXXXXXEHQHIHALGIGDALCTGRSYANNENAV----PSMLQNSV 1822
                                   +H H+  + +    G+  A   + +     ++LQ+  
Sbjct: 470  ---PEDQAPGTPLLTKNNPPRRRRHTHSQKLNN--MKGKDQATAHDGLRKNGQTVLQSDD 524

Query: 1823 QLISKSQDNSNCSQHYKVADEEQAKGPKRGYCHAT-ETDERQVQSMNMMRANLNSMLVYQ 1999
            QL ++S +NSNCS    V +  QA   K     AT + D   V S     ++ N++ +YQ
Sbjct: 525  QLPARSPNNSNCSSS-SVLERGQASELKTNNSSATQQADSSTVISYG---SHYNNLCIYQ 580

Query: 2000 AICRENGYHGNNSNLDPHFPEIYKKRRTEKAKNAVLLSTSSGMANVGDGAGKATAQSENN 2179
             I                F  I++++RTEK +N+   STSS +      A K+   +E  
Sbjct: 581  MI------------PGMQFSNIHRRKRTEKGQNSATSSTSSSIT-----AAKSLVAAE-- 621

Query: 2180 ANADHFASQANNNGSASQFNNADGTKNLNYGASYSDIYSQSEVAGPNRQVHSIPAEMLSH 2359
                      N   +  QF ++                              +PA++   
Sbjct: 622  -----ACPVDNIQVNPHQFTSS-----------------------------GVPAKI--- 644

Query: 2360 KEALSRASLGILQAPKFIQTFGQTERKTKRRSKGPTQVHNLAS 2488
            +EA  + S+ +      I    QT+   K+R++G T+V +LAS
Sbjct: 645  QEAGRKFSMEVSPTFNCIMALSQTDGLKKKRTRGATRVRDLAS 687


>ref|XP_007010232.1| DNA N-glycosylase/DNA-(Apurinic or apyrimidinic site) lyase, putative
            isoform 5 [Theobroma cacao] gi|508727145|gb|EOY19042.1|
            DNA N-glycosylase/DNA-(Apurinic or apyrimidinic site)
            lyase, putative isoform 5 [Theobroma cacao]
          Length = 1978

 Score =  140 bits (354), Expect = 2e-30
 Identities = 128/398 (32%), Positives = 179/398 (44%), Gaps = 24/398 (6%)
 Frame = +2

Query: 236  MDFSRGVSNQEERDKKIHGSWXXXXXXXXXXXXXXXXTDNRQGNQSGITNRHE-SDRSVE 412
            M+F    S  +  + +  GSW                  N QGNQ G  N  E +  S  
Sbjct: 1    MNFGEEFSIPQGNEFQFTGSWIPVTPQKPIATISNPIPVNGQGNQFGRGNWQELAGFSTG 60

Query: 413  FFQEIPSISNGDAKYLDLMSSLDQSRGVNNWEAALAEKRCSNHIIGSYTPSLQNVTGGWN 592
            + Q+I +  NG  +  + +  + QSR         AE R  N+I G YT  LQN + GWN
Sbjct: 61   YVQDILNY-NGIGQNFNPIEQMCQSRVDYVGSINSAENRMINNIAGPYTQVLQNESTGWN 119

Query: 593  NINPFA-------ASASEMQRGSNNATGSPYSPISYTFSHIDNCWHQRNSENMTLVTXXX 751
            N N  A       A+A     G+ +       PI    S  DN  H  +  +M       
Sbjct: 120  N-NTLANLPATRNATAFAPANGTASIRRENAVPIPIMHSQADNWRHSSSHNSM------- 171

Query: 752  XXXXXXXXXXXCPSQINQYGFHDP------YRSPRGIADAVSNGTISFRFAPITPEKGER 913
                       C +Q +    H        Y+ P+   DA  + T SF+  P   ++ + 
Sbjct: 172  -----------CTNQTHSTSLHFLRNIDRFYQMPQ--LDAAFHITTSFQSTPAAQDQTKI 218

Query: 914  VDNNQSSKMVNVSVDERLIRDNVHSKGN-------NALEL-QCKESFLQTVVDASSGTIF 1069
            + N Q S +   + DE     ++H KG        NA E+ Q     LQ +VD+SS  I 
Sbjct: 219  MGNKQLSTVPASASDE----SSIHEKGKQENLITYNANEVSQHNCELLQNIVDSSSAVI- 273

Query: 1070 NTPLEENRNPEKGEENCIGLNKTPEQKA-KRKKHRPRVVREGKPKRTPK-ATVGRTSTKE 1243
            +TP+EE R+ E+G E  I LNKTP+QK  KR+KHRP+V+ EGKPKR PK AT    ++KE
Sbjct: 274  STPVEEKRDSERGSEQGIDLNKTPQQKPPKRRKHRPKVIVEGKPKRNPKPATTKNINSKE 333

Query: 1244 TPAVKRKYVRKKVSNTPANIVGETMDPAHTTAAKSCKR 1357
             P+ KRKYVR+K     A    ++   +  TAA   KR
Sbjct: 334  NPSGKRKYVRRKGLTESATEQADSTKKSDPTAATPAKR 371



 Score = 61.2 bits (147), Expect = 2e-06
 Identities = 94/416 (22%), Positives = 151/416 (36%), Gaps = 23/416 (5%)
 Frame = +2

Query: 1193 KPKRTPKATVGRTSTKET-PAVKRKYVRKKVSNTPANIVGETMDPAHTTAAKSCKRALNF 1369
            K   T KA   R S      A KRKYVR+           +  DP+    AKSC+R LNF
Sbjct: 412  KESSTEKADCTRGSDPSAGTAGKRKYVRRNGLRASTGQQVQETDPSAVPVAKSCRRVLNF 471

Query: 1370 NLEGQAADARHETRIHQEGMLHCNVDGSSSRLASRFNSESRAQELCTVVPNSSSGAKTTV 1549
            +LE    +++      QE                R +SES+A  L       +SG KTT+
Sbjct: 472  DLENTGNESQAAIFNRQE------------MQEGRKSSESQAVGLWN---TENSGFKTTL 516

Query: 1550 QLAQGVEVMVEN-SPAGFAFDLNRATTQMLDDYISLXXXXXXXXXXXXXXXXXXXXXEHQ 1726
                  ++++EN  P          +  ML DYIS+                     E +
Sbjct: 517  TTQSSQQMVLENCQPQTEISHTPSLSKMMLIDYISM---PGMPADTASQFQAKDLQMESR 573

Query: 1727 HIHA--LGIGDALCTGRSYANNENAVPSMLQNSVQLISKSQDNSN--------------C 1858
            +++A  + + +A  + +SY+N  +     +       S SQ  SN              C
Sbjct: 574  NVNARHVNMDNADLSQKSYSNGYSPTQQYINPKGMDQSVSQRTSNWENIDGTNELILERC 633

Query: 1859 SQHYK--VADEEQAKGPKRGYCHATETDERQVQSMNMMRANLNSMLVYQAICRENGYHGN 2032
             +     +++  +  G KR +  A E  +       +  A+  S L+ Q + + N  + N
Sbjct: 634  PKSVPTVLSNSSEGMGSKRDHSQAIEQGQ-------LYTASSLSSLLLQGVFQMNEGYRN 686

Query: 2033 NSNLDPHFPEIYKKRRTEKAKNAVLLSTSSGMANVGDGAGKATAQSENNANADHFASQAN 2212
             S     F +  K+++ E    A +     GM+        ++ Q +       F S  +
Sbjct: 687  GSTNGAGFLQALKRKKIEDESQAYIYGMKYGMS-------YSSGQLQTKGTNSEFTSLRD 739

Query: 2213 NNGSASQFNNADGTKNLNYGA---SYSDIYSQSEVAGPNRQVHSIPAEMLSHKEAL 2371
               S  QF  +D       G       D    S  AGP      I +++ S  E L
Sbjct: 740  CGTSDPQFLQSDNIARRKSGGVSELTGDTNVHSTAAGPTSSKKHISSQLHSGMETL 795


>ref|XP_002530889.1| conserved hypothetical protein [Ricinus communis]
            gi|223529542|gb|EEF31495.1| conserved hypothetical
            protein [Ricinus communis]
          Length = 1876

 Score =  138 bits (348), Expect = 1e-29
 Identities = 131/417 (31%), Positives = 185/417 (44%), Gaps = 66/417 (15%)
 Frame = +2

Query: 377  ITNRHESDRSVEFFQEIPSISNGDAKYLDLMSSLDQS-RGVNNW--EAALAEK-RCSNHI 544
            + +RHES      +QE+    +G  + +   SSL Q    ++ +    + AEK R  NHI
Sbjct: 43   LIDRHESQLGSTNWQELVGFPSGYVQEMSNYSSLAQHCTQIDQFTRNGSFAEKNRMINHI 102

Query: 545  IGSYTPSLQNVTGGW-----------NNINPFAASASEMQRGSNNATGSPYSPISYTFSH 691
             GSYT +L N    W           NN  P A  +  + R ++ A      P+    + 
Sbjct: 103  AGSYTRALLNENVSWSSNSLADLLVMNNTAPTAYPSRTLHRNTSIAE----RPLIPNLNT 158

Query: 692  IDNCWHQRNSENMTLVTXXXXXXXXXXXXXXCPSQINQYGFHDPYR------SPRGI-AD 850
              N   + NS  +                     Q+ QYGF  PY       SP  I AD
Sbjct: 159  PVNSLREFNSGELFYTNQAHCSSSNVPSGHNSLFQMPQYGFPIPYNPNYDLNSPPSIEAD 218

Query: 851  AVSNGTISFRFAPITPEKGERVDNNQSSKMVNV-----SVDERLIRDNVHSKGNNALELQ 1015
            A S  T SF+FAPI  E+ ++++N Q S +VN      S +ER  +DN      N     
Sbjct: 219  AASTVTNSFQFAPII-EQAKKLEN-QLSALVNFPQGKGSSEERDKQDNYVVSLGNVPNQH 276

Query: 1016 CKESFLQTVVDASSGTIFNTPLEENRNPEKGEENCIGLNKTPEQKA-KRKKHRPRVVREG 1192
              +   Q +VD++S  I +TP EE +   +G +  I LNKTP+QK  KR+KHRP+V+ EG
Sbjct: 277  NPDKLFQNIVDSASAVI-STPFEEPKESCQGSDQVIDLNKTPQQKTPKRRKHRPKVIVEG 335

Query: 1193 KPKRTPKATVGR----------------------------------TSTKETPAVKRKYV 1270
            KPK+TPK+   +                                  T++ E P  KRKYV
Sbjct: 336  KPKKTPKSVTPKTVDPNEKAIEKRKYVRKKGQKESTTEHPDSIGETTNSTEKPKQKRKYV 395

Query: 1271 RKKVSNTP----ANIVGETMDPAHTTAAKSCKRALNFNLEGQAADARHETRIHQEGM 1429
            RKK    P    A+  GET  P+  TAA SC++ALNF +E   ++        QE M
Sbjct: 396  RKKSLKEPQIRNADYAGETTYPSAGTAA-SCRKALNFEMENTYSEREKNLVAQQEIM 451


>ref|XP_006492173.1| PREDICTED: transcriptional activator DEMETER-like isoform X1 [Citrus
            sinensis] gi|568878380|ref|XP_006492174.1| PREDICTED:
            transcriptional activator DEMETER-like isoform X2 [Citrus
            sinensis]
          Length = 2029

 Score =  132 bits (331), Expect = 1e-27
 Identities = 138/495 (27%), Positives = 199/495 (40%), Gaps = 74/495 (14%)
 Frame = +2

Query: 236  MDFSRGVSNQEERDKKIHGSWXXXXXXXXXXXXXXXXTDNRQGNQSGITNRHE-SDRSVE 412
            M F  G     E++ ++ G W                  +R     G  N  E +     
Sbjct: 1    MKFGDGFPIPREKEFQLMGPWMPVTPEKPIATRSNPQQVDRYAESQGRANWRELAGFPGG 60

Query: 413  FFQEIPSISNGDAKYLDLMSSLDQSRGVNNWEAALAEK-RCSNHIIGSYTPSLQNVTGGW 589
              QE P+  N     L  +    Q+ G N     + ++ R  NHI  S+   L N  GGW
Sbjct: 61   HIQETPNY-NRAVPNLSPIGQGGQTEGYNGGNMRVTDRQRIINHIAASFRQDLYNEDGGW 119

Query: 590  --NNINPFAA---------------------SASEMQRGSNNATGSPYSPISYTFSHID- 697
              N + P  A                     + S++    + A     S +S+   H   
Sbjct: 120  NNNQLGPMLARTNAAALTSANRNVVLSAGMVNRSQLLNSHSQANKWGESSLSHLLLHNQT 179

Query: 698  -----------NCWHQR------------NSENMTLVTXXXXXXXXXXXXXXCPSQINQY 808
                       N +HQ             NS+                       Q  QY
Sbjct: 180  QNSGSNLLRNTNNFHQMPRAPYSGSDMLLNSDIFYQTPQAHHSGLNLLQNGDSFHQTPQY 239

Query: 809  GFHDPY-------RSPRGIADAVSNGTISFRFAPITPEKGERVDNNQSSKMVNVSVDERL 967
            GF   Y        S R  ADA  + T +  F+P+TP+  ++ +NNQ S+  N+      
Sbjct: 240  GFPVTYLPNYKQNSSSREEADAALSVTAALPFSPVTPDPLKKWENNQFSRKENLPTAGNS 299

Query: 968  IRDN------VHSKGNNALELQCKESFLQTVVDASSGTIFNTPLEENRNPEKGEENCIGL 1129
              +       V S GN  ++    E  LQ VV +    I +TPLEE R+ E      I L
Sbjct: 300  PAEKDKQWHLVTSIGNETIQHNHHE-ILQNVVPSE---IISTPLEEKRDSENISNEGIDL 355

Query: 1130 NKTPEQKA-KRKKHRPRVVREGKPKRTPKATVGRTSTKETPAVKRKYVRKK----VSNTP 1294
            NKTP+QK  KR+KHRP+VV+EGKP+ TPKA    T  +  P  KRKYVR+K     +   
Sbjct: 356  NKTPQQKPPKRRKHRPKVVKEGKPRGTPKA---ETPKRANPGGKRKYVRRKGREESATQK 412

Query: 1295 ANIVGETMDPAHTTAAKSCKRALNFNLEGQAADARHETRIHQEGM-------LHCNVDGS 1453
            A+I+ ET D +   A +SC+R LNF+LE    +++ E    Q  M       L+ N+D  
Sbjct: 413  ADIIRETTDASARLAERSCRRELNFDLENPVDESQIEVIGEQAEMQQSYKRTLNLNLDFQ 472

Query: 1454 SSRLASRFNSESRAQ 1498
            ++ + SR NS  RA+
Sbjct: 473  TTEMDSRTNSGGRAK 487


>ref|XP_006436684.1| hypothetical protein CICLE_v10030474mg [Citrus clementina]
            gi|557538880|gb|ESR49924.1| hypothetical protein
            CICLE_v10030474mg [Citrus clementina]
          Length = 2029

 Score =  132 bits (331), Expect = 1e-27
 Identities = 138/495 (27%), Positives = 199/495 (40%), Gaps = 74/495 (14%)
 Frame = +2

Query: 236  MDFSRGVSNQEERDKKIHGSWXXXXXXXXXXXXXXXXTDNRQGNQSGITNRHE-SDRSVE 412
            M F  G     E++ ++ G W                  +R     G  N  E +     
Sbjct: 1    MKFGDGFPIPREKEFQLMGPWMPVTPEKPIATRSNPQQVDRYAESQGRANWRELAGFPGG 60

Query: 413  FFQEIPSISNGDAKYLDLMSSLDQSRGVNNWEAALAEK-RCSNHIIGSYTPSLQNVTGGW 589
              QE P+  N     L  +    Q+ G N     + ++ R  NHI  S+   L N  GGW
Sbjct: 61   HIQETPNY-NRAVPNLSPIGQGGQTEGYNGGNMRVTDRQRIINHIAASFRQDLYNEDGGW 119

Query: 590  --NNINPFAA---------------------SASEMQRGSNNATGSPYSPISYTFSHID- 697
              N + P  A                     + S++    + A     S +S+   H   
Sbjct: 120  NNNQLGPMLARTNAAALTSANRNVVLSAGMVNRSQLLNSHSQANKWGESSLSHLLLHNQT 179

Query: 698  -----------NCWHQR------------NSENMTLVTXXXXXXXXXXXXXXCPSQINQY 808
                       N +HQ             NS+                       Q  QY
Sbjct: 180  QNSGSNLLRNTNNFHQMPRAPYSGSDMLLNSDIFYQTPQAHHSGLNLLQNGDSFHQTPQY 239

Query: 809  GFHDPY-------RSPRGIADAVSNGTISFRFAPITPEKGERVDNNQSSKMVNVSVDERL 967
            GF   Y        S R  ADA  + T +  F+P+TP+  ++ +NNQ S+  N+      
Sbjct: 240  GFPVTYLPNYKQNSSSREEADAALSVTAALPFSPVTPDPLKKWENNQFSRKENLPTAGNS 299

Query: 968  IRDN------VHSKGNNALELQCKESFLQTVVDASSGTIFNTPLEENRNPEKGEENCIGL 1129
              +       V S GN  ++    E  LQ VV +    I +TPLEE R+ E      I L
Sbjct: 300  PAEKDKQWHLVTSIGNETIQHNHHE-ILQNVVPSE---IISTPLEEKRDSENISNEGIDL 355

Query: 1130 NKTPEQKA-KRKKHRPRVVREGKPKRTPKATVGRTSTKETPAVKRKYVRKK----VSNTP 1294
            NKTP+QK  KR+KHRP+VV+EGKP+ TPKA    T  +  P  KRKYVR+K     +   
Sbjct: 356  NKTPQQKPPKRRKHRPKVVKEGKPRGTPKA---ETPKRANPGGKRKYVRRKGREESATQK 412

Query: 1295 ANIVGETMDPAHTTAAKSCKRALNFNLEGQAADARHETRIHQEGM-------LHCNVDGS 1453
            A+I+ ET D +   A +SC+R LNF+LE    +++ E    Q  M       L+ N+D  
Sbjct: 413  ADIIRETTDASARLAERSCRRELNFDLENPVDESQIEVIGEQAEMQQSYKRTLNLNLDFQ 472

Query: 1454 SSRLASRFNSESRAQ 1498
            ++ + SR NS  RA+
Sbjct: 473  TTEMDSRTNSGGRAK 487