BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Akebia27_contig00005581
         (2414 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002281594.1| PREDICTED: cleavage and polyadenylation spec...   788   0.0  
ref|XP_007041140.1| Cleavage and polyadenylation specificity fac...   772   0.0  
ref|XP_002523201.1| conserved hypothetical protein [Ricinus comm...   751   0.0  
ref|XP_006448924.1| hypothetical protein CICLE_v10014454mg [Citr...   747   0.0  
ref|XP_006468290.1| PREDICTED: cleavage and polyadenylation spec...   744   0.0  
ref|XP_007147504.1| hypothetical protein PHAVU_006G130200g [Phas...   740   0.0  
ref|XP_003546247.1| PREDICTED: cleavage and polyadenylation spec...   740   0.0  
ref|XP_004486563.1| PREDICTED: cleavage and polyadenylation spec...   739   0.0  
ref|XP_003534764.1| PREDICTED: cleavage and polyadenylation spec...   732   0.0  
gb|EXB51974.1| Cleavage and polyadenylation specificity factor C...   728   0.0  
ref|XP_006448925.1| hypothetical protein CICLE_v10014454mg [Citr...   726   0.0  
ref|XP_004141524.1| PREDICTED: cleavage and polyadenylation spec...   719   0.0  
ref|XP_007214175.1| hypothetical protein PRUPE_ppa019072mg [Prun...   694   0.0  
ref|XP_002300333.2| zinc finger family protein [Populus trichoca...   690   0.0  
gb|AHN05783.1| YTH domain-contained RNA binding protein 14 [Malu...   686   0.0  
ref|XP_004295608.1| PREDICTED: cleavage and polyadenylation spec...   685   0.0  
gb|EYU43238.1| hypothetical protein MIMGU_mgv1a002387mg [Mimulus...   684   0.0  
ref|XP_006359103.1| PREDICTED: cleavage and polyadenylation spec...   667   0.0  
ref|XP_004231555.1| PREDICTED: cleavage and polyadenylation spec...   666   0.0  
ref|XP_006352991.1| PREDICTED: cleavage and polyadenylation spec...   659   0.0  

>ref|XP_002281594.1| PREDICTED: cleavage and polyadenylation specificity factor
            CPSF30-like [Vitis vinifera]
          Length = 673

 Score =  788 bits (2035), Expect = 0.0
 Identities = 425/708 (60%), Positives = 464/708 (65%), Gaps = 25/708 (3%)
 Frame = -2

Query: 2341 EDPEGVLSFDFEGGLDTAPSNPSAAVPLVPTDSSVISNTXXXXXXXXXXXXSEPVAGNNI 2162
            ED EGVLSFDFEGGLD AP   +   PL+ +D++  +               EP  G   
Sbjct: 2    EDAEGVLSFDFEGGLDAAPGTAATVAPLIQSDATAAAAAPSSVVSA------EPTPGGAP 55

Query: 2161 ARRCFRQTVCRHWLRSLCMKGDACGFLHQYDKARMPICRFYRLYGECREQDCVYKHSNED 1982
             RR FRQTVCRHWLRSLCMKGDACGFLHQYDK+RMP+CRF+RLYGECREQDCVYKH+NED
Sbjct: 56   GRRSFRQTVCRHWLRSLCMKGDACGFLHQYDKSRMPVCRFFRLYGECREQDCVYKHTNED 115

Query: 1981 IKECNMYKLGFCPNGPDCRYRHVKLPGPPPPFEEVVQKIQHQSTFNYGSSNRFFQQRNAS 1802
            IKECNMYKLGFCPNG DCRYRH KLPGPPP  EEV QKIQ  S+FNYGSSNRF+Q RN  
Sbjct: 116  IKECNMYKLGFCPNGSDCRYRHAKLPGPPPTMEEVFQKIQQLSSFNYGSSNRFYQNRNP- 174

Query: 1801 YTHQTERSQFPQGSNIVNQVVAVKQSTTADXXXXXXXXXXXXXXXXXXXXXIETQNLPNS 1622
            Y  QTE+SQ  QGSN VN     K STT                          QNLPN 
Sbjct: 175  YNQQTEKSQILQGSNAVNLGTVAKSSTTE----AINVQQQQVQPPQQQVSQTPMQNLPNG 230

Query: 1621 LPTEANKTATPLPQGLSRYFIVKSCNRENLELSVQQGVWATQRSNEAKLNEAFDSIDNVI 1442
            LP +ANKTA+PLPQG+SRYFIVKSCNRENLELSVQQGVWATQRSNEAKLNEAFDS++NVI
Sbjct: 231  LPNQANKTASPLPQGISRYFIVKSCNRENLELSVQQGVWATQRSNEAKLNEAFDSVENVI 290

Query: 1441 LIFSVNRTRHFQGCAKMTSKIGGFVGGGNWKYAHGTAHYGRNFSVKWLKLCELSFHKTRH 1262
            LIFSVNRTRHFQGCAKMTSKIGGFVGGGNWKYAHGTAHYGRNFSVKWLKLCELSFHKTRH
Sbjct: 291  LIFSVNRTRHFQGCAKMTSKIGGFVGGGNWKYAHGTAHYGRNFSVKWLKLCELSFHKTRH 350

Query: 1261 LRNPYNENLP-----------XXXXXXXXSLLYLEPDSELMAISVXXXXXXXXXXXKGVN 1115
            LRNPYNENLP                   SLLYLEPDSELMAIS+           KGVN
Sbjct: 351  LRNPYNENLPVKISRDCQELEPSIGEQLASLLYLEPDSELMAISLAAESKREEEKAKGVN 410

Query: 1114 LDDETENPDIVPFXXXXXXXXXXXXXXXXXSFSQTLS-AAQXXXXXXGMMWAPHMPLARG 938
             D+  ENPDIVPF                 SF Q L  AAQ      G+MW PHMPLARG
Sbjct: 411  PDNGGENPDIVPF-EDNEEEEEEESEEEEESFGQALGPAAQGRGRGRGIMWPPHMPLARG 469

Query: 937  ARPMPGLRGFPPVMMGGDGFTYGAITPDGFPMPDLFGMAPRAFAPYGPRFSGDLSGLGQS 758
            ARP+P +RGFPPVMMG DGF+Y A+ PDGF MPD+FG+ PRAF PYGPRFSGD       
Sbjct: 470  ARPIPSMRGFPPVMMGADGFSYSAVPPDGFAMPDIFGVGPRAFPPYGPRFSGDF------ 523

Query: 757  SAMGFTPVDGTGPTSGMMFHGRPNQPGNVFXXXXXXXXXXXXXXXXXXXXXXXMSVAAPV 578
                      TGP SGMMF GR  QPG VF                       +  AAP 
Sbjct: 524  ----------TGPASGMMFPGR-GQPGAVF--PASGYGMMMGPGRAPFMGGMGVPAAAPT 570

Query: 577  RASXXXXXXXXXXXXXXPLAQNNNNRVVKKDQRRPLD-------------MGQEMAGPGM 437
            RA               P +QNN     K+DQR P++              GQ+MAGP  
Sbjct: 571  RAGRPVGMPPMFPPPPPPNSQNNR---TKRDQRTPVNDRNDRYSGGSDQGRGQDMAGPD- 626

Query: 436  LDDGKYQSGIKVQCEDSFGGRNSFRNDESESEDEAPRRSRHGEGKKRK 293
             D+ +Y  G+K Q +D FGG NSFRNDESESEDEAPRRSRHGEGKK++
Sbjct: 627  -DETQYLQGLKSQQDDQFGGGNSFRNDESESEDEAPRRSRHGEGKKKR 673


>ref|XP_007041140.1| Cleavage and polyadenylation specificity factor 30 [Theobroma cacao]
            gi|508705075|gb|EOX96971.1| Cleavage and polyadenylation
            specificity factor 30 [Theobroma cacao]
          Length = 698

 Score =  772 bits (1993), Expect = 0.0
 Identities = 424/723 (58%), Positives = 471/723 (65%), Gaps = 31/723 (4%)
 Frame = -2

Query: 2341 EDPEGVLSFDFEGGLDTAPSNPSAAVPLVPTDSSVI----SNTXXXXXXXXXXXXSEPVA 2174
            +D EG LSFDFEGGLD  P+ P+A++P+V +D S      SN             ++P A
Sbjct: 2    DDSEGGLSFDFEGGLDAGPAAPTASMPVVNSDPSAAANNNSNNNSAVPGAAPTSTNDPAA 61

Query: 2173 ---GNNIARRCFRQTVCRHWLRSLCMKGDACGFLHQYDKARMPICRFYRLYGECREQDCV 2003
               G    RR FRQTVCRHWLRSLCMKGDACGFLHQYDK+RMP+CRF+RL+GECREQDCV
Sbjct: 62   AVGGGGAGRRSFRQTVCRHWLRSLCMKGDACGFLHQYDKSRMPVCRFFRLFGECREQDCV 121

Query: 2002 YKHSNEDIKECNMYKLGFCPNGPDCRYRHVKLPGPPPPFEEVVQKIQHQSTFNYGSSNRF 1823
            YKH+NEDIKECNMYKLGFCPNG DCRYRH KLPGPPPP EEV+QKIQ  S++NY   N+F
Sbjct: 122  YKHTNEDIKECNMYKLGFCPNGADCRYRHAKLPGPPPPVEEVLQKIQQLSSYNY---NKF 178

Query: 1822 FQQRNASYTHQTERSQFPQGSNIVNQVVAVKQSTTADXXXXXXXXXXXXXXXXXXXXXIE 1643
            FQQRN+ +  QTE+SQ PQG N VNQ    K STT                        +
Sbjct: 179  FQQRNSGFAQQTEKSQIPQGQNNVNQGAGGKPSTTESANMHPQQQVQQPQQQVSQT---Q 235

Query: 1642 TQNLPNSLPTEANKTATPLPQGLSRYFIVKSCNRENLELSVQQGVWATQRSNEAKLNEAF 1463
             QN+PN    +ANKTA PLPQG+SRYFIVKSCNRENLELSVQQGVWATQRSNEAKLNEAF
Sbjct: 236  IQNVPNGQSNQANKTAIPLPQGISRYFIVKSCNRENLELSVQQGVWATQRSNEAKLNEAF 295

Query: 1462 DSIDNVILIFSVNRTRHFQGCAKMTSKIGGFVGGGNWKYAHGTAHYGRNFSVKWLKLCEL 1283
            DS +NVILIFSVNRTRHFQGCAKMTSKIGG V GGNWKYAHGTAHYGRNFSVKWLKLCEL
Sbjct: 296  DSAENVILIFSVNRTRHFQGCAKMTSKIGGSVAGGNWKYAHGTAHYGRNFSVKWLKLCEL 355

Query: 1282 SFHKTRHLRNPYNENLP-----------XXXXXXXXSLLYLEPDSELMAISVXXXXXXXX 1136
            SFHKTRHLRNPYNENLP                   SLLYLEPDSELMAISV        
Sbjct: 356  SFHKTRHLRNPYNENLPVKISRDCQELEPSIGEQLASLLYLEPDSELMAISVAAELKREE 415

Query: 1135 XXXKGVNLDDETENPDIVPFXXXXXXXXXXXXXXXXXSFSQTLSAAQXXXXXXGMMWAPH 956
               KGVN D+  ENPDIVPF                 SFS   +AAQ      G+MW PH
Sbjct: 416  EKAKGVNSDNGGENPDIVPF-EDNEEEEEEESEEEDESFS---AAAQGRGRGRGVMWPPH 471

Query: 955  MPLARGARPMPGLRGFPPVMMGGDGFTYGAITPDGFPMPDLFGMAPRAFAPYGPRFSGDL 776
            MPLARGARPMPG+RGFPP+MMGGDGF+YG +TPDGF +PDLFG APR F PYGPRFSGD 
Sbjct: 472  MPLARGARPMPGMRGFPPMMMGGDGFSYGPVTPDGFGVPDLFG-APRPFPPYGPRFSGDF 530

Query: 775  SGLGQSSAMGFTPVDGTGPTSGMMFHGRPNQPGNVFXXXXXXXXXXXXXXXXXXXXXXXM 596
                            TGP SGMMF GRP QPG +F                        
Sbjct: 531  ----------------TGPASGMMFPGRPPQPGAMF--PAGGLGMMMGPGRAPFMGGMGP 572

Query: 595  SVAAPVRASXXXXXXXXXXXXXXPLAQNNNNRVVKKDQRRPLD----------MGQEMAG 446
            + A PVR                P +Q N+ R VK+DQR P +           GQEMAG
Sbjct: 573  TGANPVRGGRPVSMPPMFPPPPAPSSQ-NSGRAVKRDQRTPTNDRYGAGSEQGRGQEMAG 631

Query: 445  PG--MLDDGKY-QSGIKVQCEDSFGGRNSFRNDESESEDEAPRRSRHGEGKKRKDSEVDE 275
            PG  + D+ +Y Q G K   ED F   NSFRNDESESEDEAPRRSR+GEGKK++ S   +
Sbjct: 632  PGGRLDDETQYQQEGQKAHHEDQFAAGNSFRNDESESEDEAPRRSRYGEGKKKRRSLEGD 691

Query: 274  QQN 266
              N
Sbjct: 692  DAN 694


>ref|XP_002523201.1| conserved hypothetical protein [Ricinus communis]
            gi|223537608|gb|EEF39232.1| conserved hypothetical
            protein [Ricinus communis]
          Length = 702

 Score =  751 bits (1938), Expect = 0.0
 Identities = 408/721 (56%), Positives = 463/721 (64%), Gaps = 33/721 (4%)
 Frame = -2

Query: 2341 EDPEGVLSFDFEGGLDTA-PSNPSAAVPLVPTDSSVISNTXXXXXXXXXXXXSEPV---- 2177
            +D +G LSFDFEGGLD++ P+NP+A++P +P+D++                 ++P     
Sbjct: 2    DDTDGGLSFDFEGGLDSSGPTNPTASIPAIPSDNTAAVAAATNNSIVPNVSSNDPASAAA 61

Query: 2176 --AGNNIARRCFRQTVCRHWLRSLCMKGDACGFLHQYDKARMPICRFYRLYGECREQDCV 2003
              A N   RR FRQTVCRHWLRSLCMKGDACGFLHQYDK+RMP+CRF+RLYGECREQDCV
Sbjct: 62   AAANNQAGRRSFRQTVCRHWLRSLCMKGDACGFLHQYDKSRMPVCRFFRLYGECREQDCV 121

Query: 2002 YKHSNEDIKECNMYKLGFCPNGPDCRYRHVKLPGPPPPFEEVVQKIQHQSTFNYGSSNRF 1823
            YKH+NEDIKECNMYKLGFCPNGPDCRYRH KLPGPPPP EEV+QKIQ  +++NYGSSN+F
Sbjct: 122  YKHTNEDIKECNMYKLGFCPNGPDCRYRHAKLPGPPPPVEEVLQKIQQLNSYNYGSSNKF 181

Query: 1822 FQQRNASYTHQTERSQFPQGSNIVNQVVAVK----QSTTADXXXXXXXXXXXXXXXXXXX 1655
            FQQR A +    ++SQF QG N + Q +A K    +S                       
Sbjct: 182  FQQRGAGFQQHADKSQFSQGPNNMGQGMAAKPPGTESANVQQPQQQQPQPGQGQQSQQQA 241

Query: 1654 XXIETQNLPNSLPTEANKTATPLPQGLSRYFIVKSCNRENLELSVQQGVWATQRSNEAKL 1475
                TQNLPN  P +AN+TA PLPQG+SRYFIVKSCNRENLELSVQQGVWATQRSNEAKL
Sbjct: 242  TQTPTQNLPNGQPNQANRTAIPLPQGISRYFIVKSCNRENLELSVQQGVWATQRSNEAKL 301

Query: 1474 NEAFDSIDNVILIFSVNRTRHFQGCAKMTSKIGGFVGGGNWKYAHGTAHYGRNFSVKWLK 1295
            NEAFDS +NVILIFSVNRTRHFQGCAKMTSKIG  VGGGNWKYAHGTAHYGRNFSVKWLK
Sbjct: 302  NEAFDSAENVILIFSVNRTRHFQGCAKMTSKIGASVGGGNWKYAHGTAHYGRNFSVKWLK 361

Query: 1294 LCELSFHKTRHLRNPYNENLPXXXXXXXXS-----------LLYLEPDSELMAISVXXXX 1148
            LCELSFHKTRHLRNPYNENLP                    LLY EPDSELMAIS+    
Sbjct: 362  LCELSFHKTRHLRNPYNENLPVKISRDCQELEPSVGGQLACLLYDEPDSELMAISLAAEA 421

Query: 1147 XXXXXXXKGVNLDDETENPDIVPFXXXXXXXXXXXXXXXXXSFSQTLSA-AQXXXXXXGM 971
                   KGVN ++  +NPDIVPF                 SF Q L A  Q      G+
Sbjct: 422  KREEEKAKGVNPENGGDNPDIVPF-EDNEEEEEEESEEEEESFGQALGAPGQGRGRGRGI 480

Query: 970  MWAPHMPLARGARPMPGLRGFPPVMMGGDGFTYGAITPDGFPMPDLFGMAPRAFAPYGPR 791
            +W PHMPLARGARP+PG+RGFPP+MMG D F+YG +TPDGF MPDLFG+APR F PY PR
Sbjct: 481  IW-PHMPLARGARPIPGMRGFPPMMMGADSFSYGPVTPDGFGMPDLFGVAPRGFTPYAPR 539

Query: 790  FSGDLSGLGQSSAMGFTPVDGTGPTSGMMFHGRPNQPGNVFXXXXXXXXXXXXXXXXXXX 611
            FSGD                 TG  SGMMF GRP QPG VF                   
Sbjct: 540  FSGDF----------------TGAASGMMFPGRPPQPGGVF--PNGGFGMMMGPGRAPFM 581

Query: 610  XXXXMSVAAPVRASXXXXXXXXXXXXXXPLAQNNNNRVVKKDQRRPL--------DMGQE 455
                 +   P+R +              PL   +  R VK+DQR           D G+ 
Sbjct: 582  GGMGPNSTNPLRGN------WPGGMPFPPLPTPSPQRPVKRDQRMTANDRYSTGSDQGRN 635

Query: 454  MAGPGMLDDGKY-QSGIKVQCEDSFGGRNSFRNDESESEDEAPRRSRHGEG-KKRKDSEV 281
             AG    D+ +Y Q G+K   ED FG  NSFRNDESESEDEAPRRSRHGEG KKR+ SE 
Sbjct: 636  TAGEPD-DEARYQQEGLKASHEDQFGAGNSFRNDESESEDEAPRRSRHGEGKKKRRGSEG 694

Query: 280  D 278
            D
Sbjct: 695  D 695


>ref|XP_006448924.1| hypothetical protein CICLE_v10014454mg [Citrus clementina]
            gi|557551535|gb|ESR62164.1| hypothetical protein
            CICLE_v10014454mg [Citrus clementina]
          Length = 701

 Score =  747 bits (1929), Expect = 0.0
 Identities = 410/723 (56%), Positives = 461/723 (63%), Gaps = 35/723 (4%)
 Frame = -2

Query: 2341 EDPEGVLSFDFEGGLDTAPSNPSAAVPLVPTDSSVIS-------NTXXXXXXXXXXXXSE 2183
            ED EG LSFDFEGGLD  P  P+A+ P + +DS+  +       N             + 
Sbjct: 2    EDSEGGLSFDFEGGLDAGPGMPTASNPAIQSDSTAAAAAAAANANHAALSSSGAAPDHAS 61

Query: 2182 PVAGNNIARRCFRQTVCRHWLRSLCMKGDACGFLHQYDKARMPICRFYRLYGECREQDCV 2003
                ++  RR FRQTVCRHWLRSLCMKGDACGFLHQYDK+RMP+CRF+RL+GECREQDCV
Sbjct: 62   APVPHHSGRRSFRQTVCRHWLRSLCMKGDACGFLHQYDKSRMPVCRFFRLFGECREQDCV 121

Query: 2002 YKHSNEDIKECNMYKLGFCPNGPDCRYRHVKLPGPPPPFEEVVQKIQHQSTFNYGSSNRF 1823
            YKH+NEDIKECNMYKLGFCPNGPDCRYRHVKLPGPPP  EEV+QKIQ  S++N+G+ N+ 
Sbjct: 122  YKHTNEDIKECNMYKLGFCPNGPDCRYRHVKLPGPPPSVEEVLQKIQQISSYNHGNPNKL 181

Query: 1822 FQQRNASYTHQTERSQFPQGSNIVNQVVAVKQSTTADXXXXXXXXXXXXXXXXXXXXXIE 1643
            FQQR A ++HQ ++SQF QG N VNQ  A K ST                         +
Sbjct: 182  FQQRGA-FSHQIDKSQFSQGPNAVNQGAAGKSSTAESANVHQQQLVQQPQQQGTQTT--Q 238

Query: 1642 TQNLPNSLPTEANKTATPLPQGLSRYFIVKSCNRENLELSVQQGVWATQRSNEAKLNEAF 1463
             QNLPN LP + N+ ATPLPQG+SRYFIVKSCNRENLELSVQQGVWATQRSNEAKLNEAF
Sbjct: 239  MQNLPNGLPNQTNRNATPLPQGISRYFIVKSCNRENLELSVQQGVWATQRSNEAKLNEAF 298

Query: 1462 DSIDNVILIFSVNRTRHFQGCAKMTSKIGGFVGGGNWKYAHGTAHYGRNFSVKWLKLCEL 1283
            DS +NVILIFSVNRTRHFQGCAKMTSKIGG VGGGNWKYAHGTAHYGRNFSVKWLKLCEL
Sbjct: 299  DSAENVILIFSVNRTRHFQGCAKMTSKIGGSVGGGNWKYAHGTAHYGRNFSVKWLKLCEL 358

Query: 1282 SFHKTRHLRNPYNENLP-----------XXXXXXXXSLLYLEPDSELMAISVXXXXXXXX 1136
            SFHKTRHLRNPYNENLP                   +LLYLEPDSELMAISV        
Sbjct: 359  SFHKTRHLRNPYNENLPVKISRDCQELEPSIGEQLAALLYLEPDSELMAISVAAEAKREE 418

Query: 1135 XXXKGVNLDDETENPDIVPFXXXXXXXXXXXXXXXXXSFSQTLSAAQXXXXXXGMMWAPH 956
               KGVN D+  +NPDIVPF                       +A+Q      GMMW   
Sbjct: 419  EKAKGVNPDNGGDNPDIVPFEDNEEEEEEESEEEE----ESLGTASQGRGRGRGMMWPGP 474

Query: 955  MPLARGARPMPGLRGFPPVMMGGDGFTYGAITPDGFPMPDLFGMAPRAFAPYGPRFSGDL 776
            MPLARGARP+PG+RGFPP+M+G DGF+YG +TPDGFPMPDLFG+APR FAPYGPRFSGD 
Sbjct: 475  MPLARGARPVPGMRGFPPMMIGADGFSYG-VTPDGFPMPDLFGVAPRPFAPYGPRFSGDF 533

Query: 775  SGLGQSSAMGFTPVDGTGPTSGMMFHGRPNQPGNVFXXXXXXXXXXXXXXXXXXXXXXXM 596
            +G G                 GMMF GRP QPG+VF                        
Sbjct: 534  TGPG-----------------GMMFPGRPPQPGSVFPPNGFGGMMMGPGRPPFMGGMG-- 574

Query: 595  SVAAPVRASXXXXXXXXXXXXXXPLAQNNNNRVVKKDQRRPL-----------DMG--QE 455
               A                   P +  N++RV K+D R  +           D G  QE
Sbjct: 575  --PAATNPRGGRPVGVPPPFPNQPQSSQNSSRVAKRDVRGSINDRNDRYSAGSDQGRAQE 632

Query: 454  MAGPGMLDDGK---YQSGIKVQCEDSFGGRNSFRNDESESEDEAPRRSRHGEG-KKRKDS 287
            M GPG   D +    Q G K   ED +G RN FRNDESESEDEAPRRSRHGEG KKR+DS
Sbjct: 633  MGGPGRGPDDEVQYQQEGSKANQEDQYGSRN-FRNDESESEDEAPRRSRHGEGKKKRRDS 691

Query: 286  EVD 278
            E D
Sbjct: 692  EGD 694


>ref|XP_006468290.1| PREDICTED: cleavage and polyadenylation specificity factor
            CPSF30-like [Citrus sinensis]
          Length = 683

 Score =  744 bits (1922), Expect = 0.0
 Identities = 412/716 (57%), Positives = 459/716 (64%), Gaps = 28/716 (3%)
 Frame = -2

Query: 2341 EDPEGVLSFDFEGGLDTAPSNPSAAVPLVPTDSSVISNTXXXXXXXXXXXXSEPVAGNNI 2162
            ED EG LSFDFEGGLD  P  P+A+ P     SS  +              S PV  ++ 
Sbjct: 2    EDSEGGLSFDFEGGLDAGPGMPTASNPAAAPSSSGAA----------PDHASAPVPHHS- 50

Query: 2161 ARRCFRQTVCRHWLRSLCMKGDACGFLHQYDKARMPICRFYRLYGECREQDCVYKHSNED 1982
             RR FRQTVCRHWLRSLCMKGDACGFLHQYDK+RMP+CRF+RL+GECREQDCVYKH+NED
Sbjct: 51   GRRSFRQTVCRHWLRSLCMKGDACGFLHQYDKSRMPVCRFFRLFGECREQDCVYKHTNED 110

Query: 1981 IKECNMYKLGFCPNGPDCRYRHVKLPGPPPPFEEVVQKIQHQSTFNYGSSNRFFQQRNAS 1802
            IKECNMYKLGFCPNGPDCRYRHVKLPGPPP  EEV+QKIQ  S++N+G+ N+ FQQR A 
Sbjct: 111  IKECNMYKLGFCPNGPDCRYRHVKLPGPPPSVEEVLQKIQQISSYNHGNPNKHFQQRGA- 169

Query: 1801 YTHQTERSQFPQGSNIVNQVVAVKQSTTADXXXXXXXXXXXXXXXXXXXXXIETQNLPNS 1622
            ++HQT++SQF QG N VNQ  A K ST                         + QNLPN 
Sbjct: 170  FSHQTDKSQFSQGPNAVNQGAAGKSSTAESANVHQQQLVQQPQQQGTQTT--QMQNLPNG 227

Query: 1621 LPTEANKTATPLPQGLSRYFIVKSCNRENLELSVQQGVWATQRSNEAKLNEAFDSIDNVI 1442
            LP + N+ ATPLPQG+SRYFIVKSCNRENLELSVQQGVWATQRSNEAKLNEAFDS +NVI
Sbjct: 228  LPNQTNRNATPLPQGISRYFIVKSCNRENLELSVQQGVWATQRSNEAKLNEAFDSAENVI 287

Query: 1441 LIFSVNRTRHFQGCAKMTSKIGGFVGGGNWKYAHGTAHYGRNFSVKWLKLCELSFHKTRH 1262
            LIFSVNRTRHFQGCAKMTSKIGG VGGGNWKYAHGTAHYGRNFSVKWLKLCELSFHKTRH
Sbjct: 288  LIFSVNRTRHFQGCAKMTSKIGGSVGGGNWKYAHGTAHYGRNFSVKWLKLCELSFHKTRH 347

Query: 1261 LRNPYNENLP-----------XXXXXXXXSLLYLEPDSELMAISVXXXXXXXXXXXKGVN 1115
            LRNPYNENLP                   +LLYLEPDSELMAISV           KGVN
Sbjct: 348  LRNPYNENLPVKISRDCQELEPSIGEQLAALLYLEPDSELMAISVAAEAKREEEKAKGVN 407

Query: 1114 LDDETENPDIVPFXXXXXXXXXXXXXXXXXSFSQTLSAAQXXXXXXGMMWAPHMPLARGA 935
             D+  +NPDIVPF                       +A+Q      GMMW   MPLARGA
Sbjct: 408  PDNGGDNPDIVPFEDNEEEEEEESEEEE----ESLGTASQGRGRGRGMMWPGPMPLARGA 463

Query: 934  RPMPGLRGFPPVMMGGDGFTYGAITPDGFPMPDLFGMAPRAFAPYGPRFSGDLSGLGQSS 755
            RP+PG+RGFPP+M+G DGF+YG +TPDGFPMPDLFG+APR FAPYGPRFSGD +G G   
Sbjct: 464  RPVPGMRGFPPMMIGADGFSYG-VTPDGFPMPDLFGVAPRPFAPYGPRFSGDFTGPG--- 519

Query: 754  AMGFTPVDGTGPTSGMMFHGRPNQPGNVFXXXXXXXXXXXXXXXXXXXXXXXMSVAAPVR 575
                          GMMF GRP QPG+VF                           A   
Sbjct: 520  --------------GMMFPGRPPQPGSVFPPNGFGGMMMGPGRPPFMGGMG----PAATN 561

Query: 574  ASXXXXXXXXXXXXXXPLAQNNNNRVVKKDQRRPL-----------DMG--QEMAGPGML 434
                            P +  N++R  K+D R  +           D G  QEM GPG  
Sbjct: 562  PRGGRPVGVPPPFPNQPQSSQNSSRAAKRDVRGSINDRNDRYSAGSDQGRAQEMGGPGRG 621

Query: 433  DDGK---YQSGIKVQCEDSFGGRNSFRNDESESEDEAPRRSRHGEG-KKRKDSEVD 278
             D +    Q G K   ED +G RN FRNDESESEDEAPRRSRHGEG KKR+DSE D
Sbjct: 622  PDDEVQYQQEGSKANQEDQYGSRN-FRNDESESEDEAPRRSRHGEGKKKRRDSEGD 676


>ref|XP_007147504.1| hypothetical protein PHAVU_006G130200g [Phaseolus vulgaris]
            gi|561020727|gb|ESW19498.1| hypothetical protein
            PHAVU_006G130200g [Phaseolus vulgaris]
          Length = 697

 Score =  740 bits (1911), Expect = 0.0
 Identities = 403/720 (55%), Positives = 448/720 (62%), Gaps = 28/720 (3%)
 Frame = -2

Query: 2341 EDPEGVLSFDFEGGLDTAPSNPSA-AVPLVPTDSSVISNTXXXXXXXXXXXXS-EPVAGN 2168
            ED EGVLSFDFEGGLDTAPS  +A + PLV  DSS  ++               EP A N
Sbjct: 2    EDSEGVLSFDFEGGLDTAPSAAAAPSGPLVQHDSSAAASAVSNGGPPAPTPSGTEPAAVN 61

Query: 2167 NIARRCFRQTVCRHWLRSLCMKGDACGFLHQYDKARMPICRFYRLYGECREQDCVYKHSN 1988
               RR FRQTVCRHWLRSLCMKGDACGFLHQYDKARMP+CRF+RLYGECREQDCVYKH+N
Sbjct: 62   VPGRRSFRQTVCRHWLRSLCMKGDACGFLHQYDKARMPVCRFFRLYGECREQDCVYKHTN 121

Query: 1987 EDIKECNMYKLGFCPNGPDCRYRHVKLPGPPPPFEEVVQKIQHQSTFNYGSSNRFFQQRN 1808
            EDIKECNMYKLGFCPNGPDCRYRH K PGPPPP EEV+QKIQH  ++NY SSN+FFQQR 
Sbjct: 122  EDIKECNMYKLGFCPNGPDCRYRHAKSPGPPPPVEEVLQKIQHLYSYNYNSSNKFFQQRG 181

Query: 1807 ASYTHQTERSQFPQGSNIVNQVVAVKQSTTADXXXXXXXXXXXXXXXXXXXXXIETQNLP 1628
            +SYT Q E+SQ PQG+N  NQ V  K                            + QN+ 
Sbjct: 182  SSYTQQAEKSQLPQGTNSTNQGVTGKPLPAES--GNAQPQQQVQQSQQQQVSQNQIQNVA 239

Query: 1627 NSLPTEANKTATPLPQGLSRYFIVKSCNRENLELSVQQGVWATQRSNEAKLNEAFDSIDN 1448
            N  P +A++ ATPLPQG+SRYFIVKSCNRENLELSVQQGVWATQRSNE+KLNEAFDS++N
Sbjct: 240  NGQPNQASRAATPLPQGISRYFIVKSCNRENLELSVQQGVWATQRSNESKLNEAFDSVEN 299

Query: 1447 VILIFSVNRTRHFQGCAKMTSKIGGFVGGGNWKYAHGTAHYGRNFSVKWLKLCELSFHKT 1268
            VILIFSVNRTRHFQGCAKMTS+IGG V GGNWKYAHGTAHYGRNFSVKWLKLCELSFHKT
Sbjct: 300  VILIFSVNRTRHFQGCAKMTSRIGGSVAGGNWKYAHGTAHYGRNFSVKWLKLCELSFHKT 359

Query: 1267 RHLRNPYNENLP-----------XXXXXXXXSLLYLEPDSELMAISVXXXXXXXXXXXKG 1121
            RHLRNPYNENLP                   SLLYLEPD ELMA+SV           KG
Sbjct: 360  RHLRNPYNENLPVKISRDCQELEPSIGEQLASLLYLEPDGELMAVSVAAESKREEEKAKG 419

Query: 1120 VNLDDETENPDIVPFXXXXXXXXXXXXXXXXXSFSQTLSAAQXXXXXXGMMWAPHMPLAR 941
            VN D+  ENPDIVPF                        A Q      GMMW PHMPL R
Sbjct: 420  VNPDNGGENPDIVPFEDNEEEEEEESDEEDESFGHGVGPAGQGRGRGRGMMWPPHMPLPR 479

Query: 940  GARPMPGLRGFPPVMMGGDGFTYGAITPDGFPMPDLFGMAPRAFAPYGPRFSGDLSGLGQ 761
            GARPMPG++GF PVMM GDG +YG + PDGF MPDLF + PRAFAPYGPRFSGD      
Sbjct: 480  GARPMPGMQGFNPVMM-GDGLSYGPVAPDGFGMPDLFSVGPRAFAPYGPRFSGDFG---- 534

Query: 760  SSAMGFTPVDGTGPTSGMMFHGRPNQPGNVFXXXXXXXXXXXXXXXXXXXXXXXMSVAAP 581
                        GP + MMF GRP+QPG                          ++ A P
Sbjct: 535  ------------GPPAAMMFRGRPSQPG---MFPGGGFGMMMNPGRGPFMGGMGVAGANP 579

Query: 580  VRASXXXXXXXXXXXXXXPLAQNNNNRVVKKDQR---------------RPLDMGQEMAG 446
             R                     N NR+ K+DQR               +  DM  +   
Sbjct: 580  PRGGRPVNMPPMFPPPPP--LPQNTNRLAKRDQRTTDRNDRYGSGSEQGKSQDMLSQSGA 637

Query: 445  PGMLDDGKYQSGIKVQCEDSFGGRNSFRNDESESEDEAPRRSRHGEGKKRKDSEVDEQQN 266
            P   DD +YQ G K   +D     N+FRND+SESEDEAPRRSRHGEGKK++    D   N
Sbjct: 638  PD--DDMQYQQGYKAN-QDDHPAVNNFRNDDSESEDEAPRRSRHGEGKKKRRGPEDVNTN 694


>ref|XP_003546247.1| PREDICTED: cleavage and polyadenylation specificity factor
            CPSF30-like [Glycine max]
          Length = 691

 Score =  740 bits (1910), Expect = 0.0
 Identities = 404/715 (56%), Positives = 446/715 (62%), Gaps = 33/715 (4%)
 Frame = -2

Query: 2341 EDPEGVLSFDFEGGLDTAPSNPSAAVP---LVPTDSSVISNTXXXXXXXXXXXXSEPVAG 2171
            ED EGVLSFDFEGGLD APS+ +AAVP   LV  DSS  ++             +   AG
Sbjct: 2    EDSEGVLSFDFEGGLDAAPSSAAAAVPSGPLVQHDSSAAASAVSNGGHAAPAPSTADPAG 61

Query: 2170 NNI-ARRCFRQTVCRHWLRSLCMKGDACGFLHQYDKARMPICRFYRLYGECREQDCVYKH 1994
             N+  RR FRQTVCRHWLRSLCMKGDACGFLHQYDKARMP+CRF+RLYGECREQDCVYKH
Sbjct: 62   GNVPGRRSFRQTVCRHWLRSLCMKGDACGFLHQYDKARMPVCRFFRLYGECREQDCVYKH 121

Query: 1993 SNEDIKECNMYKLGFCPNGPDCRYRHVKLPGPPPPFEEVVQKIQHQSTFNYGSSNRFFQQ 1814
            +NEDIKECNMYKLGFCPNGPDCRYRH K PGPPPP EEV+QKIQH  ++NY SSN+FFQQ
Sbjct: 122  TNEDIKECNMYKLGFCPNGPDCRYRHAKSPGPPPPVEEVLQKIQHLFSYNYNSSNKFFQQ 181

Query: 1813 RNASYTHQTERSQFPQGSNIVNQVVAVKQSTTADXXXXXXXXXXXXXXXXXXXXXIETQN 1634
            R ASY  Q E+ Q PQG+N  NQ V  K                            + QN
Sbjct: 182  RGASYNQQAEKPQLPQGTNSTNQGVTGKPLPAES---GNAQPQQQVQQSQQQVNQSQMQN 238

Query: 1633 LPNSLPTEANKTATPLPQGLSRYFIVKSCNRENLELSVQQGVWATQRSNEAKLNEAFDSI 1454
            + N  P +AN+TATPLPQG+SRYFIVKSCNRENLELSVQQGVWATQRSNE+KLNEAFDS+
Sbjct: 239  VANGQPNQANRTATPLPQGISRYFIVKSCNRENLELSVQQGVWATQRSNESKLNEAFDSV 298

Query: 1453 DNVILIFSVNRTRHFQGCAKMTSKIGGFVGGGNWKYAHGTAHYGRNFSVKWLKLCELSFH 1274
            +NVIL+FSVNRTRHFQGCAKMTS+IGG V GGNWKYAHGTAHYGRNFSVKWLKLCELSFH
Sbjct: 299  ENVILVFSVNRTRHFQGCAKMTSRIGGSVAGGNWKYAHGTAHYGRNFSVKWLKLCELSFH 358

Query: 1273 KTRHLRNPYNENLP-----------XXXXXXXXSLLYLEPDSELMAISVXXXXXXXXXXX 1127
            KTRHLRNPYNENLP                   SLLYLEPDSELMAISV           
Sbjct: 359  KTRHLRNPYNENLPVKISRDCQELEPSIGEQLASLLYLEPDSELMAISVAAESKREEEKA 418

Query: 1126 KGVNLDDETENPDIVPFXXXXXXXXXXXXXXXXXSFSQTLSAAQXXXXXXGMMWAPHMPL 947
            KGVN D+  ENPDIVPF                        A Q      GMMW PHMPL
Sbjct: 419  KGVNPDNGGENPDIVPFEDNEEEEEEESDEEEESFSHGVGPAGQGRGRGRGMMWPPHMPL 478

Query: 946  ARGARPMPGLRGFPPVMMGGDGFTY---GAITPDGFPMPDLFGMAPRAFAPYGPRFSGDL 776
             RGARPMPG++GF PVMM GDG +Y   G + PDGF MPDLFG+ PR FAPYGPRFSGD 
Sbjct: 479  GRGARPMPGMQGFNPVMM-GDGLSYGPVGPVGPDGFGMPDLFGVGPRGFAPYGPRFSGDF 537

Query: 775  SGLGQSSAMGFTPVDGTGPTSGMMFHGRPNQPGNVFXXXXXXXXXXXXXXXXXXXXXXXM 596
                             GP + MMF GRP+QPG                          +
Sbjct: 538  G----------------GPPAAMMFRGRPSQPG---MFPSGGFGMMMNPGRGPFMGGMGV 578

Query: 595  SVAAPVRASXXXXXXXXXXXXXXPLAQNNNNRVVKKDQR---------------RPLDMG 461
              A P R                     N NR  K+DQR               +  DM 
Sbjct: 579  GGANPPRGGRPVNMPPMFPPPPP--LPQNANRAAKRDQRTADRNDRFGSGSEQGKSQDML 636

Query: 460  QEMAGPGMLDDGKYQSGIKVQCEDSFGGRNSFRNDESESEDEAPRRSRHGEGKKR 296
             +  GP   DD +YQ G K   +D     N+FRND+SESEDEAPRRSRHGEGKK+
Sbjct: 637  SQSGGPD--DDAQYQQGYKGN-QDDHPAVNNFRNDDSESEDEAPRRSRHGEGKKK 688


>ref|XP_004486563.1| PREDICTED: cleavage and polyadenylation specificity factor
            CPSF30-like [Cicer arietinum]
          Length = 677

 Score =  739 bits (1909), Expect = 0.0
 Identities = 404/703 (57%), Positives = 445/703 (63%), Gaps = 20/703 (2%)
 Frame = -2

Query: 2341 EDPEGVLSFDFEGGLDTAPSNPSAAVPLVPTD-SSVISNTXXXXXXXXXXXXSEPVAGNN 2165
            ED EGVLSFDFEGGLD AP  PSAA   VP   S  I +             + PV+GN 
Sbjct: 2    EDSEGVLSFDFEGGLDAAP--PSAATVSVPAPPSGPIVHPDSSLPPSISSNGAAPVSGNI 59

Query: 2164 IARRCFRQTVCRHWLRSLCMKGDACGFLHQYDKARMPICRFYRLYGECREQDCVYKHSNE 1985
              RR FRQTVCRHWLRSLCMKG+ACGFLHQYDKARMP+CRF+RLYGECREQDCVYKH+NE
Sbjct: 60   PGRRSFRQTVCRHWLRSLCMKGEACGFLHQYDKARMPVCRFFRLYGECREQDCVYKHTNE 119

Query: 1984 DIKECNMYKLGFCPNGPDCRYRHVKLPGPPPPFEEVVQKIQHQSTFNYGSSNRFFQQRNA 1805
            DIKECNMYKLGFCPNGPDCRYRH K PGPPPP EEV+QKIQH  ++N+ +S++F QQR +
Sbjct: 120  DIKECNMYKLGFCPNGPDCRYRHAKSPGPPPPIEEVLQKIQHLYSYNFNNSHKFIQQRGS 179

Query: 1804 SYTHQTERSQFPQGSNIVNQVVAVKQSTTADXXXXXXXXXXXXXXXXXXXXXIETQNLPN 1625
            SYT Q E+SQFPQG N  NQ VA K                           I+TQNL N
Sbjct: 180  SYTQQVEKSQFPQGINSANQGVAGKPLAAES---GNVQQQQQVQQSQQQVSQIQTQNLAN 236

Query: 1624 SLPTEANKTATPLPQGLSRYFIVKSCNRENLELSVQQGVWATQRSNEAKLNEAFDSIDNV 1445
              P +AN+TATPLPQG+SRYFIVKSCNRENLELSVQQGVWATQRSNE+KLNEAFDS++NV
Sbjct: 237  GQPNQANRTATPLPQGISRYFIVKSCNRENLELSVQQGVWATQRSNESKLNEAFDSVENV 296

Query: 1444 ILIFSVNRTRHFQGCAKMTSKIGGFVGGGNWKYAHGTAHYGRNFSVKWLKLCELSFHKTR 1265
            ILIFSVNRTRHFQGCAKMTS+IGG V GGNWKYAHGTAHYGRNFSVKWLKLCELSFHKTR
Sbjct: 297  ILIFSVNRTRHFQGCAKMTSRIGGSVAGGNWKYAHGTAHYGRNFSVKWLKLCELSFHKTR 356

Query: 1264 HLRNPYNENLP-----------XXXXXXXXSLLYLEPDSELMAISVXXXXXXXXXXXKGV 1118
            HLRNPYNENLP                   SLLYLEPDSELMAIS+           KGV
Sbjct: 357  HLRNPYNENLPVKISRDCQELEPSIGEQLASLLYLEPDSELMAISIAAESKREEEKAKGV 416

Query: 1117 NLDDETENPDIVPFXXXXXXXXXXXXXXXXXSFSQTLSAAQXXXXXXGMMWAPHMPLARG 938
            N D+  ENPDIVPF                      +   Q      GMMW PHMPL RG
Sbjct: 417  NPDNAGENPDIVPFEDNEEEEEEESDEEEESFVQAVVPVGQGRGRGRGMMWPPHMPLGRG 476

Query: 937  ARPMPGLRGFPPVMMGGDGFTYGAITPDGFPMPDLFGMAPRAFAPYGPRFSGDLSGLGQS 758
            ARPMPG++GF PVMM GDG +YG   PDGF MPDLFGM PR F PYGPRFSGD +     
Sbjct: 477  ARPMPGMQGFNPVMM-GDGLSYGPGAPDGFGMPDLFGMGPRGFGPYGPRFSGDFA----- 530

Query: 757  SAMGFTPVDGTGPTSGMMFHGRPNQPGNVFXXXXXXXXXXXXXXXXXXXXXXXMSVAAPV 578
                       GP + MMF GRP+QPG                          M V  P 
Sbjct: 531  -----------GPPAAMMFRGRPSQPG-----MFPGGGFGMMMNPGRGPFMGGMGVPGPN 574

Query: 577  RASXXXXXXXXXXXXXXPLAQNNNNRVVKKDQRR-----PLDMGQEMAGPGMLDDGKYQS 413
                             P    N NR+ K+DQR          GQE    G   D   QS
Sbjct: 575  PPRGGRPLNMPPMFPPPPPPPQNVNRIAKRDQRTNDRNDRYSSGQEQ---GKSQDMLSQS 631

Query: 412  G---IKVQCEDSFGGRNSFRNDESESEDEAPRRSRHGEGKKRK 293
            G    ++Q + S    N+FRN++SESEDEAPRRSRHGEGKKRK
Sbjct: 632  GGPDDEMQYQQSGAPANNFRNEDSESEDEAPRRSRHGEGKKRK 674


>ref|XP_003534764.1| PREDICTED: cleavage and polyadenylation specificity factor
            CPSF30-like [Glycine max]
          Length = 681

 Score =  732 bits (1889), Expect = 0.0
 Identities = 400/712 (56%), Positives = 440/712 (61%), Gaps = 30/712 (4%)
 Frame = -2

Query: 2341 EDPEGVLSFDFEGGLDTAPSNPSAAV--PLVPTDSSVISNTXXXXXXXXXXXXS-EPVAG 2171
            ED EGVLSFDFEGGLD APS+ +AA   PL+P DSS  ++             + +PV G
Sbjct: 2    EDSEGVLSFDFEGGLDAAPSSAAAAPSGPLIPHDSSAAASAVSNGGPAAPAPSAVDPVGG 61

Query: 2170 NNI-ARRCFRQTVCRHWLRSLCMKGDACGFLHQYDKARMPICRFYRLYGECREQDCVYKH 1994
             N+  RR FRQTVCRHWLRSLCMKGDACGFLHQYDKARMP+CRF+RLYGECREQDCVYKH
Sbjct: 62   GNVPGRRSFRQTVCRHWLRSLCMKGDACGFLHQYDKARMPVCRFFRLYGECREQDCVYKH 121

Query: 1993 SNEDIKECNMYKLGFCPNGPDCRYRHVKLPGPPPPFEEVVQKIQHQSTFNYGSSNRFFQQ 1814
            +NEDIKECNMYKLGFCPNGPDCRYRH K PGPPPP EEV+QKIQH  ++NY SSN+FFQQ
Sbjct: 122  TNEDIKECNMYKLGFCPNGPDCRYRHAKSPGPPPPVEEVLQKIQHLYSYNYNSSNKFFQQ 181

Query: 1813 RNASYTHQTERSQFPQGSNIVNQVVAVKQSTTADXXXXXXXXXXXXXXXXXXXXXIETQN 1634
            R ASY  Q E+   PQG+N  NQ V                               + QN
Sbjct: 182  RGASYNQQAEKPLLPQGNNSTNQGVT---GNPLPAELGNAQPQQQVQQSQQQVNQSQMQN 238

Query: 1633 LPNSLPTEANKTATPLPQGLSRYFIVKSCNRENLELSVQQGVWATQRSNEAKLNEAFDSI 1454
            + N  P +AN+TATPLPQG+SRYFIVKSCNRENLELSVQQGVWATQRSNE+KLNEAFDS+
Sbjct: 239  VANGQPNQANRTATPLPQGISRYFIVKSCNRENLELSVQQGVWATQRSNESKLNEAFDSV 298

Query: 1453 DNVILIFSVNRTRHFQGCAKMTSKIGGFVGGGNWKYAHGTAHYGRNFSVKWLKLCELSFH 1274
            +NVILIFSVNRTRHFQGCAKMTSKIGG V GGNWKYAHGTAHYGRNFSVKWLKLCELSFH
Sbjct: 299  ENVILIFSVNRTRHFQGCAKMTSKIGGSVAGGNWKYAHGTAHYGRNFSVKWLKLCELSFH 358

Query: 1273 KTRHLRNPYNENLP-----------XXXXXXXXSLLYLEPDSELMAISVXXXXXXXXXXX 1127
            KTRHLRNPYNENLP                   SLLYLEPDSELMAISV           
Sbjct: 359  KTRHLRNPYNENLPVKISRDCQELEPSIGEQLASLLYLEPDSELMAISVAAESKREEEKA 418

Query: 1126 KGVNLDDETENPDIVPFXXXXXXXXXXXXXXXXXSFSQTLSAAQXXXXXXGMMWAPHMPL 947
            KGVN D+  ENPDIVPF                        A Q      GMMW PHMPL
Sbjct: 419  KGVNPDNGGENPDIVPFEDNEEEEEEESDEEEESFGHGVGPAGQGRGRGRGMMWPPHMPL 478

Query: 946  ARGARPMPGLRGFPPVMMGGDGFTYGAITPDGFPMPDLFGMAPRAFAPYGPRFSGDLSGL 767
             RGARPMPG++GF PVMM GDG +YG + PDGF MPDLFG+ PR FAPYGPRFSGD    
Sbjct: 479  GRGARPMPGMQGFNPVMM-GDGLSYGPVGPDGFGMPDLFGVGPRGFAPYGPRFSGDFG-- 535

Query: 766  GQSSAMGFTPVDGTGPTSGMMFHGRPNQPGNVFXXXXXXXXXXXXXXXXXXXXXXXMSVA 587
                          GP + MMF GRP+QPG                          +  A
Sbjct: 536  --------------GPPAAMMFRGRPSQPG---MFPGGGFGMMLNPGRGPFMGGIGVGGA 578

Query: 586  APVRASXXXXXXXXXXXXXXPLAQNNNNRVVKKDQR---------------RPLDMGQEM 452
             P R                     N NR  K+DQR               +  DM  + 
Sbjct: 579  NPPRGGRPVNMPPMFPPPPP--LPQNANRAAKRDQRTADRNDRFGSGSEQGKSQDMLSQS 636

Query: 451  AGPGMLDDGKYQSGIKVQCEDSFGGRNSFRNDESESEDEAPRRSRHGEGKKR 296
             GP   DD +YQ G K        G      D+SESEDEAPRRSRHGEGKK+
Sbjct: 637  GGPD--DDPQYQQGYK--------GNQDDHPDDSESEDEAPRRSRHGEGKKK 678


>gb|EXB51974.1| Cleavage and polyadenylation specificity factor CPSF30 [Morus
            notabilis]
          Length = 710

 Score =  728 bits (1880), Expect = 0.0
 Identities = 406/728 (55%), Positives = 454/728 (62%), Gaps = 40/728 (5%)
 Frame = -2

Query: 2341 EDPEGVLSFDFEGGLDTA-----PSNPSAAVPLVPTDSSVISNTXXXXXXXXXXXXSEPV 2177
            ED EGVLSFDFEGGLDT      P+  +A+  L+  DSS  + +             +P 
Sbjct: 2    EDSEGVLSFDFEGGLDTTAGGCPPNAAAASAALIHPDSSAAAASNNLAASNSAVSA-DPT 60

Query: 2176 AG-----NNIAR-RCFRQTVCRHWLRSLCMKGDACGFLHQYDKARMPICRFYRLYGECRE 2015
            +G     +N  R R FRQTVCRHWLRSLCMKG+ACGFLHQYDK+RMP+CRF+RLYGECRE
Sbjct: 61   SGGGGGASNPGRGRSFRQTVCRHWLRSLCMKGEACGFLHQYDKSRMPVCRFFRLYGECRE 120

Query: 2014 QDCVYKHSNEDIKECNMYKLGFCPNGPDCRYRHVKLPGPPPPFEEVVQKIQHQSTFNYGS 1835
            QDCVYKH+NEDIKECNMYKLGFCPNGPDCRYRH KLPGPPP  EEV+QKIQH S++NY  
Sbjct: 121  QDCVYKHTNEDIKECNMYKLGFCPNGPDCRYRHAKLPGPPPSVEEVLQKIQHLSSYNY-H 179

Query: 1834 SNRFFQQRNAS-YTHQTERSQFPQGSNIVNQVVAVKQSTTADXXXXXXXXXXXXXXXXXX 1658
            SN+FFQQRNA  +    E+   P G N V+Q V  K S                      
Sbjct: 180  SNKFFQQRNAGGFAQLGEKPLLPLGPNAVSQGVVGKPSILESANVQQPQQQVQPSQQPVG 239

Query: 1657 XXXIETQNLPNSLPTEANKTATPLPQGLSRYFIVKSCNRENLELSVQQGVWATQRSNEAK 1478
                + QN+   LP +AN+T  PLP G+SRYFIVKSCNRENLELSVQQGVWATQRSNEAK
Sbjct: 240  QN--QIQNVFTGLPNQANRTVAPLPPGISRYFIVKSCNRENLELSVQQGVWATQRSNEAK 297

Query: 1477 LNEAFDSIDNVILIFSVNRTRHFQGCAKMTSKIGGFVGGGNWKYAHGTAHYGRNFSVKWL 1298
            LNEAFD  +NVILIFSVNRTRHFQGCAKM S+IGG + GGNWKYAHGTAHYGRNFSVKWL
Sbjct: 298  LNEAFDCAENVILIFSVNRTRHFQGCAKMISRIGGSISGGNWKYAHGTAHYGRNFSVKWL 357

Query: 1297 KLCELSFHKTRHLRNPYNENLP-----------XXXXXXXXSLLYLEPDSELMAISVXXX 1151
            KLCELSFHKTRHLRNPYNENLP                   SLLYLEPDSELMAIS+   
Sbjct: 358  KLCELSFHKTRHLRNPYNENLPVKISRDCQELEPSIGEQLASLLYLEPDSELMAISLAAE 417

Query: 1150 XXXXXXXXKGVNLDDETENPDIVPFXXXXXXXXXXXXXXXXXSFSQTLSAAQXXXXXXGM 971
                    KGV+ D+  ENPDIVPF                 SFSQ L A Q      G+
Sbjct: 418  SKREEEKAKGVDPDNGGENPDIVPF-EDNEEDEEEESEDEEESFSQVLGANQGRGRGRGV 476

Query: 970  MWAPHMPLARGARPMPGLRGFPPVMMGGDGFTYGAITPDGFPMPDLFGMAPRAFAPYGPR 791
            MW PHMPL+RGARPMP ++GFPPVM+G DG  YG +TPDGFPMPDLF + PRAF PYGPR
Sbjct: 477  MWPPHMPLSRGARPMPSMQGFPPVMIGADGSPYGPVTPDGFPMPDLFNVGPRAFNPYGPR 536

Query: 790  FSGDLSGLGQSSAMGFTPVDGTGPTSGMMFHGRPNQPGNVF-XXXXXXXXXXXXXXXXXX 614
            F GD                  GPTSGMMF GRP QPG VF                   
Sbjct: 537  FPGDF----------------MGPTSGMMFRGRPTQPGAVFPGGGFGMMMGPGRAPCMGG 580

Query: 613  XXXXXMSVAAPVRASXXXXXXXXXXXXXXPLAQNNNNRVVKKDQRRPLD----------- 467
                  S A P+R                     N NR  ++DQR   +           
Sbjct: 581  MGVQGTSPARPMRPGAMPPMFQQPPP-----PSQNMNRPPRRDQRGLANDRNERYGAGSD 635

Query: 466  --MGQEMAGP--GMLDDGKYQSGIKVQCEDSFGGRNSFRNDESESEDEAPRRSRHGEG-K 302
               GQEM+GP  G  DD  YQ G K + ED +G  NSFRNDESESEDEAPRRSRHG+G K
Sbjct: 636  QVRGQEMSGPAGGPEDDAHYQLGAKARQEDQYGAGNSFRNDESESEDEAPRRSRHGDGKK 695

Query: 301  KRKDSEVD 278
            KR+ SE D
Sbjct: 696  KRRSSEED 703


>ref|XP_006448925.1| hypothetical protein CICLE_v10014454mg [Citrus clementina]
            gi|557551536|gb|ESR62165.1| hypothetical protein
            CICLE_v10014454mg [Citrus clementina]
          Length = 672

 Score =  726 bits (1874), Expect = 0.0
 Identities = 399/712 (56%), Positives = 450/712 (63%), Gaps = 24/712 (3%)
 Frame = -2

Query: 2341 EDPEGVLSFDFEGGLDTAPSNPSAAVPLVPTDSSVIS-------NTXXXXXXXXXXXXSE 2183
            ED EG LSFDFEGGLD  P  P+A+ P + +DS+  +       N             + 
Sbjct: 2    EDSEGGLSFDFEGGLDAGPGMPTASNPAIQSDSTAAAAAAAANANHAALSSSGAAPDHAS 61

Query: 2182 PVAGNNIARRCFRQTVCRHWLRSLCMKGDACGFLHQYDKARMPICRFYRLYGECREQDCV 2003
                ++  RR FRQTVCRHWLRSLCMKGDACGFLHQYDK+RMP+CRF+RL+GECREQDCV
Sbjct: 62   APVPHHSGRRSFRQTVCRHWLRSLCMKGDACGFLHQYDKSRMPVCRFFRLFGECREQDCV 121

Query: 2002 YKHSNEDIKECNMYKLGFCPNGPDCRYRHVKLPGPPPPFEEVVQKIQHQSTFNYGSSNRF 1823
            YKH+NEDIKECNMYKLGFCPNGPDCRYRHVKLPGPPP  EEV+QKIQ  S++N+G+ N+ 
Sbjct: 122  YKHTNEDIKECNMYKLGFCPNGPDCRYRHVKLPGPPPSVEEVLQKIQQISSYNHGNPNKL 181

Query: 1822 FQQRNASYTHQTERSQFPQGSNIVNQVVAVKQSTTADXXXXXXXXXXXXXXXXXXXXXIE 1643
            FQQR A ++HQ ++SQF QG N VNQ  A K ST                         +
Sbjct: 182  FQQRGA-FSHQIDKSQFSQGPNAVNQGAAGKSSTAESANVHQQQLVQQPQQQGTQTT--Q 238

Query: 1642 TQNLPNSLPTEANKTATPLPQGLSRYFIVKSCNRENLELSVQQGVWATQRSNEAKLNEAF 1463
             QNLPN LP + N+ ATPLPQG+SRYFIVKSCNRENLELSVQQGVWATQRSNEAKLNEAF
Sbjct: 239  MQNLPNGLPNQTNRNATPLPQGISRYFIVKSCNRENLELSVQQGVWATQRSNEAKLNEAF 298

Query: 1462 DSIDNVILIFSVNRTRHFQGCAKMTSKIGGFVGGGNWKYAHGTAHYGRNFSVKWLKLCEL 1283
            DS +NVILIFSVNRTRHFQGCAKMTSKIGG VGGGNWKYAHGTAHYGRNFSVKWLKLCEL
Sbjct: 299  DSAENVILIFSVNRTRHFQGCAKMTSKIGGSVGGGNWKYAHGTAHYGRNFSVKWLKLCEL 358

Query: 1282 SFHKTRHLRNPYNENLPXXXXXXXXSLLYLEPDSELMAISVXXXXXXXXXXXKGVNLDDE 1103
            SFHKTRHLRNPYNENLP                  + AISV           KGVN D+ 
Sbjct: 359  SFHKTRHLRNPYNENLP------------------VKAISVAAEAKREEEKAKGVNPDNG 400

Query: 1102 TENPDIVPFXXXXXXXXXXXXXXXXXSFSQTLSAAQXXXXXXGMMWAPHMPLARGARPMP 923
             +NPDIVPF                       +A+Q      GMMW   MPLARGARP+P
Sbjct: 401  GDNPDIVPFEDNEEEEEEESEEEE----ESLGTASQGRGRGRGMMWPGPMPLARGARPVP 456

Query: 922  GLRGFPPVMMGGDGFTYGAITPDGFPMPDLFGMAPRAFAPYGPRFSGDLSGLGQSSAMGF 743
            G+RGFPP+M+G DGF+YG +TPDGFPMPDLFG+APR FAPYGPRFSGD +G G       
Sbjct: 457  GMRGFPPMMIGADGFSYG-VTPDGFPMPDLFGVAPRPFAPYGPRFSGDFTGPG------- 508

Query: 742  TPVDGTGPTSGMMFHGRPNQPGNVFXXXXXXXXXXXXXXXXXXXXXXXMSVAAPVRASXX 563
                      GMMF GRP QPG+VF                           A       
Sbjct: 509  ----------GMMFPGRPPQPGSVFPPNGFGGMMMGPGRPPFMGGMG----PAATNPRGG 554

Query: 562  XXXXXXXXXXXXPLAQNNNNRVVKKDQRRPL-----------DMG--QEMAGPGMLDDGK 422
                        P +  N++RV K+D R  +           D G  QEM GPG   D +
Sbjct: 555  RPVGVPPPFPNQPQSSQNSSRVAKRDVRGSINDRNDRYSAGSDQGRAQEMGGPGRGPDDE 614

Query: 421  ---YQSGIKVQCEDSFGGRNSFRNDESESEDEAPRRSRHGEG-KKRKDSEVD 278
                Q G K   ED +G RN FRNDESESEDEAPRRSRHGEG KKR+DSE D
Sbjct: 615  VQYQQEGSKANQEDQYGSRN-FRNDESESEDEAPRRSRHGEGKKKRRDSEGD 665


>ref|XP_004141524.1| PREDICTED: cleavage and polyadenylation specificity factor
            CPSF30-like [Cucumis sativus]
          Length = 707

 Score =  719 bits (1856), Expect = 0.0
 Identities = 390/722 (54%), Positives = 446/722 (61%), Gaps = 34/722 (4%)
 Frame = -2

Query: 2341 EDPEGVLSFDFEGGLDTAPSNPSA--AVPLVPTDSSV------ISNTXXXXXXXXXXXXS 2186
            ED EGVLSFDFEGGLD  P+NP+A  ++P++ +DSS       +SN              
Sbjct: 2    EDSEGVLSFDFEGGLDAGPTNPAATSSLPIINSDSSAPPAASAVSNPLSGALGPAVSAEP 61

Query: 2185 EPVAGNNIA-RRCFRQTVCRHWLRSLCMKGDACGFLHQYDKARMPICRFYRLYGECREQD 2009
                  N+  RR FRQTVCRHWLRSLCMKGDACGFLHQYDK+RMPICRF+RLYGECREQD
Sbjct: 62   TGAPHGNVGNRRSFRQTVCRHWLRSLCMKGDACGFLHQYDKSRMPICRFFRLYGECREQD 121

Query: 2008 CVYKHSNEDIKECNMYKLGFCPNGPDCRYRHVKLPGPPPPFEEVVQKIQHQSTFNYGSSN 1829
            CVYKH+NEDIKECNMYK GFCPNGPDCRYRH KLPGPPPP EE++QKIQH  ++NYG SN
Sbjct: 122  CVYKHTNEDIKECNMYKFGFCPNGPDCRYRHAKLPGPPPPLEEILQKIQHLGSYNYGPSN 181

Query: 1828 RFFQQRNASYTHQTERSQFPQGSNIVNQVVAVKQSTTADXXXXXXXXXXXXXXXXXXXXX 1649
            +FF QR    + Q E+SQFPQ   +V Q V  K S                         
Sbjct: 182  KFFTQRGVGLSQQNEKSQFPQVPALVTQGVTGKPSAAES----VNVQQQQGQQSAPQASQ 237

Query: 1648 IETQNLPNSLPTEANKTATPLPQGLSRYFIVKSCNRENLELSVQQGVWATQRSNEAKLNE 1469
               Q+L N  P + N+ AT LPQG+SRYFIVKSCNRENLELSVQQGVWATQRSNEAKLNE
Sbjct: 238  TPVQSLSNGQPNQLNRNATSLPQGISRYFIVKSCNRENLELSVQQGVWATQRSNEAKLNE 297

Query: 1468 AFDSIDNVILIFSVNRTRHFQGCAKMTSKIGGFVGGGNWKYAHGTAHYGRNFSVKWLKLC 1289
            AFDS DNVILIFSVNRTRHFQGCAKM S+IGG V GGNWKYAHGT HYG+NFS+KWLKLC
Sbjct: 298  AFDSADNVILIFSVNRTRHFQGCAKMMSRIGGSVSGGNWKYAHGTPHYGQNFSLKWLKLC 357

Query: 1288 ELSFHKTRHLRNPYNENLP-----------XXXXXXXXSLLYLEPDSELMAISVXXXXXX 1142
            ELSF KTRHLRNPYNENLP                   SLLYLEPD ELMA+SV      
Sbjct: 358  ELSFQKTRHLRNPYNENLPVKISRDCQELEPSVGEQLASLLYLEPDGELMAVSVAAESKR 417

Query: 1141 XXXXXKGVNLDDETENPDIVPFXXXXXXXXXXXXXXXXXSFSQTLS-AAQXXXXXXGMMW 965
                 KGVN D  +ENPDIVPF                 SF Q+     Q      GMMW
Sbjct: 418  EEEKAKGVNPDIGSENPDIVPFEDNEEEEEEESEEEEEESFGQSAGLPPQGRGRGRGMMW 477

Query: 964  APHMPLARGARPMPGLRGFPPVMMGGDGFTYGAITPDGFPMPDLFGMAPRAFAPYG--PR 791
             PHMP+ RGARP  G++GFPP MMG DG +YG +TPDGFPMPD+FGM PR F PYG  PR
Sbjct: 478  PPHMPMGRGARPFHGMQGFPPGMMGPDGLSYGPVTPDGFPMPDIFGMTPRGFGPYGPTPR 537

Query: 790  FSGDLSGLGQSSAMGFTPVDGTGPTSGMMFHGRPNQPGNVFXXXXXXXXXXXXXXXXXXX 611
            FSGD                  GP + MMF GRP+QP  +F                   
Sbjct: 538  FSGDF----------------MGPPTAMMFRGRPSQPAAMF--PPSGFGMMMGQGRGPFM 579

Query: 610  XXXXMSVAAPVRASXXXXXXXXXXXXXXPLAQNNNNRVVKKDQR----------RPLDMG 461
                ++ A P R                P +Q N NR +K+DQR             + G
Sbjct: 580  GGMGVAGANPARPGRPVGVSPLYPPPAVPSSQ-NMNRAIKRDQRGLTNDRYIVGMDQNKG 638

Query: 460  QEMAGPGMLDDGKYQSGIKVQCEDSFGGRNSFRNDESESEDEAPRRSRHGEG-KKRKDSE 284
             E+   G  ++ +Y+ G K   ++ +G   +FRN+ESESEDEAPRRSRHGEG KKR+ SE
Sbjct: 639  VEIQSSGRDEEMQYKQGSKAYSDEQYGTGTTFRNEESESEDEAPRRSRHGEGKKKRRGSE 698

Query: 283  VD 278
             D
Sbjct: 699  GD 700


>ref|XP_007214175.1| hypothetical protein PRUPE_ppa019072mg [Prunus persica]
            gi|462410040|gb|EMJ15374.1| hypothetical protein
            PRUPE_ppa019072mg [Prunus persica]
          Length = 695

 Score =  694 bits (1792), Expect = 0.0
 Identities = 387/722 (53%), Positives = 442/722 (61%), Gaps = 34/722 (4%)
 Frame = -2

Query: 2341 EDPEGVLSFDFEGGLD-TAPSNPSAAVP----LVPTDSSVISNTXXXXXXXXXXXXSEPV 2177
            ED +G ++FDFEGGLD TA + P+   P    L+ +DS V +                P 
Sbjct: 2    EDSDGDINFDFEGGLDATAAAGPTNPGPPSNSLMQSDSGVAAVDTNPAAAAPQPNHPNP- 60

Query: 2176 AGNNIARRCFRQTVCRHWLRSLCMKGDACGFLHQYDKARMPICRFYRLYGECREQDCVYK 1997
              N    R +RQTVCRHWLRSLCMKG+ACGFLHQYDK+RMP+CRF+RLYGECREQDCVYK
Sbjct: 61   --NRSGGRSYRQTVCRHWLRSLCMKGEACGFLHQYDKSRMPVCRFFRLYGECREQDCVYK 118

Query: 1996 HSNEDIKECNMYKLGFCPNGPDCRYRHVKLPGPPPPFEEVVQKIQHQSTFNYGSSNRFFQ 1817
            H+NEDIKECNMYKLGFCPNGPDCRYRH KLPGPPPP EEV+QKIQH +++NY +SN+F+Q
Sbjct: 119  HTNEDIKECNMYKLGFCPNGPDCRYRHAKLPGPPPPVEEVLQKIQHLNSYNYNTSNKFYQ 178

Query: 1816 QRNASYTHQTERSQFPQGSNIVNQVVAVKQSTTADXXXXXXXXXXXXXXXXXXXXXIETQ 1637
            QRNA +  Q ++ Q  QG N V Q V  K ST                         +TQ
Sbjct: 179  QRNAGFPQQADKYQSAQGPNSVYQGVVGKPST---GESANVHQQQQVQQTQQQVGHTQTQ 235

Query: 1636 NLPNSLPTEANKTATPLPQGLSRYFIVKSCNRENLELSVQQGVWATQRSNEAKLNEAFDS 1457
            NLPN L  +AN++A PLPQG+SRYFIVKSCNRENLELSVQQGVWATQRSNE+KLNEAFDS
Sbjct: 236  NLPNGLANQANRSA-PLPQGISRYFIVKSCNRENLELSVQQGVWATQRSNESKLNEAFDS 294

Query: 1456 IDNVILIFSVNRTRHFQGCAKMTSKIGGFVGGGNWKYAHGTAHYGRNFSVKWLKLCELSF 1277
             +NVILIFSVNRTRHFQGCAKM S+IGG V GGNWKYAHG+AHYGRNFSVKWLKLCELSF
Sbjct: 295  AENVILIFSVNRTRHFQGCAKMMSRIGGSVSGGNWKYAHGSAHYGRNFSVKWLKLCELSF 354

Query: 1276 HKTRHLRNPYNENLP-----------XXXXXXXXSLLYLEPDSELMAISVXXXXXXXXXX 1130
            HKTRHLRNPYNENLP                   SLLYLEPDSELMA+S+          
Sbjct: 355  HKTRHLRNPYNENLPVKISRDCQELEPSIGEQLASLLYLEPDSELMAVSIAAESKREEEK 414

Query: 1129 XKGVNLDDETENPDIVPFXXXXXXXXXXXXXXXXXSFSQTLSAAQ--XXXXXXGMMWAPH 956
             KGVN ++  ENPDIVPF                 SF                G+MW PH
Sbjct: 415  AKGVNPENGGENPDIVPF-EDNEEEEEEESDDEEESFGPVPGVGNEGRGRGRGGIMWPPH 473

Query: 955  MPLARGARPMPGLRGFPPVMMGGDGFTYGAITPDGFPMPDLFGMAPRAFAPYGPRFSGDL 776
            MPLARG RPMPG++GFPP MMG D   YG   PDGF MP+ FG+ PR F PYGPRFSGD 
Sbjct: 474  MPLARGGRPMPGMQGFPPGMMGADAMPYGP-APDGFGMPNPFGVGPRGFNPYGPRFSGDF 532

Query: 775  SGLGQSSAMGFTPVDGTGPTSGMMFHGRPNQPGNVFXXXXXXXXXXXXXXXXXXXXXXXM 596
                            TGPT GMMF GRP QPG                          +
Sbjct: 533  ----------------TGPTPGMMFRGRPQQPG----FPPGGYGMMMGPGRAPFMGGMGV 572

Query: 595  SVAAPVRASXXXXXXXXXXXXXXPLAQNNNNRVVKKDQRRPLD-------------MGQE 455
              A P R                  +  N NR+ K+D R P +              GQE
Sbjct: 573  GGANPGRPGRPTGMSPMFPPP----SSQNTNRMQKRDPRGPSNDRNERYSAGSGQGKGQE 628

Query: 454  MAG--PGMLDDGKYQSGIKVQCEDSFGGRNSFRNDESESEDEAPRRSRHGEGKKR-KDSE 284
            + G   G  D+ +YQ   K   ED +G  N+ RND+SESEDEAPRRSRHGEGKK+ + SE
Sbjct: 629  IPGLAGGPDDEARYQQASKAYREDQYGAGNNSRNDDSESEDEAPRRSRHGEGKKKGRGSE 688

Query: 283  VD 278
             D
Sbjct: 689  GD 690


>ref|XP_002300333.2| zinc finger family protein [Populus trichocarpa]
            gi|550349048|gb|EEE85138.2| zinc finger family protein
            [Populus trichocarpa]
          Length = 669

 Score =  690 bits (1781), Expect = 0.0
 Identities = 383/726 (52%), Positives = 434/726 (59%), Gaps = 37/726 (5%)
 Frame = -2

Query: 2341 EDPEGVLSFDFEGGLDTAPSNPSAAVPLVPTDS----SVISNTXXXXXXXXXXXXSEPVA 2174
            ED EGVLSFDFEGGLD+ P+NP A++P +P+D+    +  +              +   A
Sbjct: 2    EDSEGVLSFDFEGGLDSGPANPIASIPAIPSDNYGAATAAAPNTTNTTTNTTNNSNSGAA 61

Query: 2173 GNNIARRCFRQTVCRHWLRSLCMKGDACGFLHQYDKARMPICRFYRLYGECREQDCVYKH 1994
                 RR FRQTVCRHWLRSLCMKGDACGFLHQYDK+RMP+CRF+RLYGECREQDCVYKH
Sbjct: 62   DIQAGRRSFRQTVCRHWLRSLCMKGDACGFLHQYDKSRMPVCRFFRLYGECREQDCVYKH 121

Query: 1993 SNEDIKECNMYKLGFCPNGPDCRYRHVKLPGPPPPFEEVVQKIQHQSTFNYGSSNRFFQQ 1814
            +NEDIKECNMYKLGFCPNGPDCRYRH KLPGPPPP EEVVQKIQ  +++N  +SN+ FQQ
Sbjct: 122  TNEDIKECNMYKLGFCPNGPDCRYRHAKLPGPPPPVEEVVQKIQQLNSYNGVTSNKNFQQ 181

Query: 1813 RNASYTHQTERSQFPQGSNIVNQVVAVKQSTTADXXXXXXXXXXXXXXXXXXXXXIETQN 1634
            RNA ++ Q E+S         N ++    + +A+                      + Q 
Sbjct: 182  RNAGFSQQIEKSP--------NTIIKPSGTESANVQQQQQQQQQTQTPHLTNGQHQQPQQ 233

Query: 1633 LPNSLPTEANKTATPLPQGLSR-----------YFIVKSCNRENLELSVQQGVWATQRSN 1487
                 P   N+ ATPLPQG+S            YFIVKSCNRENLELSVQQGVWATQRSN
Sbjct: 234  -----PNPLNRIATPLPQGISSFFSCVSPSQFVYFIVKSCNRENLELSVQQGVWATQRSN 288

Query: 1486 EAKLNEAFDSIDNVILIFSVNRTRHFQGCAKMTSKIGGFVGGGNWKYAHGTAHYGRNFSV 1307
            E KLNEA DS DNVILIFSVNRTRHFQGCAKM SKIG  VGGGNWKYAHGTAHYGRNFSV
Sbjct: 289  EIKLNEALDSADNVILIFSVNRTRHFQGCAKMASKIGASVGGGNWKYAHGTAHYGRNFSV 348

Query: 1306 KWLKLCELSFHKTRHLRNPYNENLP-----------XXXXXXXXSLLYLEPDSELMAISV 1160
            KWLKLCELSFHKTRHLRNP+NENLP                   SLLYLEPDSELMA+S+
Sbjct: 349  KWLKLCELSFHKTRHLRNPFNENLPVKISRDCQELEPSIGEQLASLLYLEPDSELMAVSL 408

Query: 1159 XXXXXXXXXXXKGVNLDDETENPDIVPFXXXXXXXXXXXXXXXXXSFSQTLS-AAQXXXX 983
                       KGVN D   ENPDIVPF                 SF Q L  AAQ    
Sbjct: 409  AAEAKREEEKEKGVNPDSGGENPDIVPF-EDNEEEEEEESEEEEESFGQPLGPAAQGRGR 467

Query: 982  XXGMMWAPHMPLARGARPMPGLRGFPPVMMGGDGFTYGAITPDGFPMPDLFGMAPRAFAP 803
              GMMW  H P+ARGARP+PG+RGFPP+MMG DGF+YGA+TPD F MPDLFG+A R F P
Sbjct: 468  GRGMMWPSHNPMARGARPIPGIRGFPPMMMGADGFSYGAVTPDSFGMPDLFGVASRGFPP 527

Query: 802  YGPRFSGDLSGLGQSSAMGFTPVDGTGPTSGMMFHGRPNQPGNVFXXXXXXXXXXXXXXX 623
            YGPRFSGD                 TG  SGMMF GRP+QPG VF               
Sbjct: 528  YGPRFSGDF----------------TGAASGMMFPGRPSQPGAVFPAGGFGMMMGPGRPP 571

Query: 622  XXXXXXXXMS----------VAAPVRASXXXXXXXXXXXXXXPLAQNNNNRVVKKDQRRP 473
                     S          + AP  A                 +  NN+R VK+DQR  
Sbjct: 572  FIGGMGPTPSNLLRGPRPGGMFAPFPAP----------------SSQNNSRSVKRDQRAA 615

Query: 472  LDMGQEMAGPGMLDDGKYQSGIKVQCEDSFGGRNSFRNDESESEDEAPRRSRHGEGKKRK 293
             +   +                     + FG  NS RNDESESEDEAPRRSRHGEGKK++
Sbjct: 616  ANDRNDR-------------------HNQFGAVNSIRNDESESEDEAPRRSRHGEGKKKR 656

Query: 292  DSEVDE 275
                D+
Sbjct: 657  RGSGDD 662


>gb|AHN05783.1| YTH domain-contained RNA binding protein 14 [Malus domestica]
          Length = 667

 Score =  686 bits (1769), Expect = 0.0
 Identities = 385/721 (53%), Positives = 439/721 (60%), Gaps = 33/721 (4%)
 Frame = -2

Query: 2341 EDPEGVLSFDFEGGLDTAPSNPSAAVPL--VPTDS-SVISNTXXXXXXXXXXXXSEPVAG 2171
            ED +G L+FDFEGGLD   +  ++A P   VPT + SV+ +             + P   
Sbjct: 2    EDSDGGLNFDFEGGLDAPATVSASAGPANTVPTSNYSVMQSDSAVTGLGANQAAAAPQPN 61

Query: 2170 NNIAR---RCFRQTVCRHWLRSLCMKGDACGFLHQYDKARMPICRFYRLYGECREQDCVY 2000
             N  R   R +RQTVCRHWLRSLCMKGDACGFLHQYDK+RMP+CRF+RLYGECREQDCVY
Sbjct: 62   QNANRTGGRSYRQTVCRHWLRSLCMKGDACGFLHQYDKSRMPVCRFFRLYGECREQDCVY 121

Query: 1999 KHSNEDIKECNMYKLGFCPNGPDCRYRHVKLPGPPPPFEEVVQKIQHQSTFNYGSSNRFF 1820
            KH+NEDIKECNMYKLGFCPNGPDCRYRH KLPGPPPP EEV+QKIQH +++NY +S++F+
Sbjct: 122  KHTNEDIKECNMYKLGFCPNGPDCRYRHAKLPGPPPPVEEVLQKIQHLTSYNYNNSSKFY 181

Query: 1819 QQRNASYTHQTERSQFPQGSNIVNQVVAVKQSTTADXXXXXXXXXXXXXXXXXXXXXIET 1640
            QQRNA +  Q ++ Q  QG N       V + TTA+                      +T
Sbjct: 182  QQRNAGFPQQGDKHQPAQGPNNF-----VGKPTTAEPGNVQQQQQQQLQQTQQHVGPTQT 236

Query: 1639 QNLPNSLPTEANKTATPLPQGLSRYFIVKSCNRENLELSVQQGVWATQRSNEAKLNEAFD 1460
            Q LPN L  +AN++A PLPQG SRYFIVKSCNRENLELSVQQG+WATQRSNE+KLNEAFD
Sbjct: 237  QTLPNGLANQANRSALPLPQGTSRYFIVKSCNRENLELSVQQGLWATQRSNESKLNEAFD 296

Query: 1459 SIDNVILIFSVNRTRHFQGCAKMTSKIGGFVGGGNWKYAHGTAHYGRNFSVKWLKLCELS 1280
            S +NVILIFSVNRTRHFQGCAKM S+IGG VGGGNWKYAHGTAHYGRNFSVKWLKLCELS
Sbjct: 297  SAENVILIFSVNRTRHFQGCAKMMSRIGGSVGGGNWKYAHGTAHYGRNFSVKWLKLCELS 356

Query: 1279 FHKTRHLRNPYNENLP-----------XXXXXXXXSLLYLEPDSELMAISVXXXXXXXXX 1133
            FHKTRHLRNPYNENLP                   SLLYLEPDSELMAIS+         
Sbjct: 357  FHKTRHLRNPYNENLPVKISRDCQELELSVGEQLASLLYLEPDSELMAISIAAESKREEE 416

Query: 1132 XXKGVNLDDETENPDIVPFXXXXXXXXXXXXXXXXXSFSQTLSA---AQXXXXXXGMMWA 962
              KGVN ++  ENPDIVPF                 SF Q   A    +      G+MW 
Sbjct: 417  KAKGVNPENGGENPDIVPF-EDNEEEEEEESEDEEDSFGQVPGAGNDGRGRGRGGGVMWP 475

Query: 961  PHMPLARGARPMPGLRGFPPVMMGGDGFTYGAITPDGFPMPDLFGMAPRAFAPYGPRFSG 782
            PHM L RG RPMPG++GFPP MMG D   Y    PDGF MP+ FGMAPR F PYGPRFSG
Sbjct: 476  PHMALPRGGRPMPGMQGFPPGMMGHDAMPY---VPDGFVMPNPFGMAPRGFNPYGPRFSG 532

Query: 781  DLSGLGQSSAMGFTPVDGTGPTSGMMFHGRPNQPGNVFXXXXXXXXXXXXXXXXXXXXXX 602
            D                 TGP  GMMF GRP QPG                         
Sbjct: 533  DF----------------TGPNPGMMFRGRPQQPG---------------------FPPG 555

Query: 601  XMSVAAPVRASXXXXXXXXXXXXXXPL----------AQNNNNRVVKKDQRRPLD--MGQ 458
               +  P RA                +          +  N NR+ K+D R       GQ
Sbjct: 556  GFGIMGPGRAPFMGGIHPGRGGRPTGMSPMFPPPPPPSSQNPNRMPKRDPRGASTDRKGQ 615

Query: 457  EMAGPGMLDDGKYQSGIKVQCEDSFGGRNSFRNDESESEDEAPRRSRHGEG-KKRKDSEV 281
            +M+GP   DD           E  +G  NS RND+SESEDEAPRRSRHG+G KKR+DSE 
Sbjct: 616  DMSGP---DD-----------ETHYGAGNSSRNDDSESEDEAPRRSRHGDGKKKRRDSEG 661

Query: 280  D 278
            D
Sbjct: 662  D 662


>ref|XP_004295608.1| PREDICTED: cleavage and polyadenylation specificity factor
            CPSF30-like [Fragaria vesca subsp. vesca]
          Length = 689

 Score =  685 bits (1768), Expect = 0.0
 Identities = 379/714 (53%), Positives = 435/714 (60%), Gaps = 26/714 (3%)
 Frame = -2

Query: 2341 EDPEGVLSFDFEGGLDTAPSNPSAAVPLVPTDSSVISNTXXXXXXXXXXXXSEPVAG-NN 2165
            EDP+GVL+FDFEGGLD+A  +      L  + + + S++             +P    N 
Sbjct: 2    EDPDGVLNFDFEGGLDSAAVSAPTHTGLA-SSAPIQSDSFASQPKNQAAPAPQPDPNVNP 60

Query: 2164 IARRCFRQTVCRHWLRSLCMKGDACGFLHQYDKARMPICRFYRLYGECREQDCVYKHSNE 1985
              R+ FRQTVCRHWLRSLCMKG+ACGFLHQYDK+RMP+CRF+R+YGECREQDCVYKH+NE
Sbjct: 61   SGRKSFRQTVCRHWLRSLCMKGEACGFLHQYDKSRMPVCRFFRMYGECREQDCVYKHTNE 120

Query: 1984 DIKECNMYKLGFCPNGPDCRYRHVKLPGPPPPFEEVVQKIQHQSTFNYGSSNRFFQQRNA 1805
            DIKECNMYKLGFCPNGPDCRYRH KLPGPPPP EEV+QKIQH +++NY +SN+F Q RN 
Sbjct: 121  DIKECNMYKLGFCPNGPDCRYRHAKLPGPPPPVEEVLQKIQHLNSYNYNNSNKFSQPRNG 180

Query: 1804 SYTHQTERSQFPQGSNIVNQVVAVKQSTTADXXXXXXXXXXXXXXXXXXXXXIETQNLPN 1625
             +  Q +RSQ  Q +N  NQVV    +  +                       + Q++PN
Sbjct: 181  GFPQQHDRSQPAQVTNSFNQVVVRPSAAES----ANVQQPQQFQQTQQPVAQTQAQSVPN 236

Query: 1624 SLPTEANKTATPLPQGLSRYFIVKSCNRENLELSVQQGVWATQRSNEAKLNEAFDSIDNV 1445
             L ++AN+ A PLPQG+SRYFIVKSCNRENLELSVQQGVWATQRSNE+KLNEAFDS +NV
Sbjct: 237  GLASQANRAALPLPQGISRYFIVKSCNRENLELSVQQGVWATQRSNESKLNEAFDSAENV 296

Query: 1444 ILIFSVNRTRHFQGCAKMTSKIGGFVGGGNWKYAHGTAHYGRNFSVKWLKLCELSFHKTR 1265
            ILIFSVNRTRHFQGCAKM S+IGG V GGNWKYAHGTAHYGRNFSVKWLKLCELSFHKTR
Sbjct: 297  ILIFSVNRTRHFQGCAKMMSRIGGSVSGGNWKYAHGTAHYGRNFSVKWLKLCELSFHKTR 356

Query: 1264 HLRNPYNENLP-----------XXXXXXXXSLLYLEPDSELMAISVXXXXXXXXXXXKGV 1118
            HLRNPYNENLP                   SLLYLEPDSELMAIS+           KGV
Sbjct: 357  HLRNPYNENLPVKISRDCQELEPSIGEQLASLLYLEPDSELMAISIAAESKREEEKAKGV 416

Query: 1117 NLDDETENPDIVPFXXXXXXXXXXXXXXXXXSFSQTLSAAQXXXXXXGMMWAPHMPL-AR 941
            N ++  ENPDIVPF                    Q    A        +MW PHMPL  R
Sbjct: 417  NPENGGENPDIVPFEDNEEEEEEESDDEEDY---QVPGGAIENRGRGRVMWPPHMPLGGR 473

Query: 940  GARPMPGLRGFPPVMMGGDGFTYGAITPDGFPMPDLFGM-APRAFAPYGPRFSGDLSGLG 764
            G RPMPG++GFP  MMG D   YG +TPDGF MP+ FGM  PR F PYGPRFSGD     
Sbjct: 474  GGRPMPGMQGFPG-MMGPDAMPYGPVTPDGFVMPNPFGMGGPRGFNPYGPRFSGDFG--- 529

Query: 763  QSSAMGFTPVDGTGPTSGMMFHGRPNQPGNVFXXXXXXXXXXXXXXXXXXXXXXXMSVAA 584
                         GP  GMMF GRP QPG +F                        +   
Sbjct: 530  -------------GPNPGMMFRGRPPQPGGMFPPGPYGMMMGPGRGPFMGGMGVGGN--N 574

Query: 583  PVRASXXXXXXXXXXXXXXPLAQNNNNRVVKKDQR-----------RPLDMGQEMAGPGM 437
            P R                     NNNR+ K+D R                G+EM   G 
Sbjct: 575  PARGGRPGGMPPMFPPHP---PSQNNNRLQKRDPRGSGNDRNERYSAGSGHGKEMQAGGP 631

Query: 436  LDDGKYQSGIKVQCEDSFGGRNSFRNDESESEDEAPRRSRHGEG-KKRKDSEVD 278
             D+  YQ   K   ED +G  N+ RND+SESEDEAPRRSRHGEG KKR+DSE D
Sbjct: 632  DDENHYQHSSKSYQED-YGAGNNGRNDDSESEDEAPRRSRHGEGKKKRRDSEGD 684


>gb|EYU43238.1| hypothetical protein MIMGU_mgv1a002387mg [Mimulus guttatus]
          Length = 681

 Score =  684 bits (1764), Expect = 0.0
 Identities = 376/726 (51%), Positives = 440/726 (60%), Gaps = 38/726 (5%)
 Frame = -2

Query: 2341 EDPEGVLSFDFEGGLDTAPSNPSAAVPLVPTDSSVISNTXXXXXXXXXXXXSEPVAG--- 2171
            +D EG LSFDFEGGLD  PS+P+A+VP++ + ++  + +            + PV     
Sbjct: 2    DDGEGGLSFDFEGGLDIGPSHPTASVPVIQSSANANTASAAAAAANPYNPSAAPVPATQA 61

Query: 2170 ----NNIARRCFRQTVCRHWLRSLCMKGDACGFLHQYDKARMPICRFYRLYGECREQDCV 2003
                NN  RR FRQTVCRHWLRSLCMKGDACGFLHQYDK+RMPICRF+RLYGECREQDCV
Sbjct: 62   AEGMNNGGRRSFRQTVCRHWLRSLCMKGDACGFLHQYDKSRMPICRFFRLYGECREQDCV 121

Query: 2002 YKHSNEDIKECNMYKLGFCPNGPDCRYRHVKLPGPPPPFEEVVQKIQHQSTFNYGSSNRF 1823
            YKH+NED+KECNMYKLGFCPNGPDCRYRH KLPGPPP  EEV+QKIQ  +++NYG SN F
Sbjct: 122  YKHTNEDVKECNMYKLGFCPNGPDCRYRHAKLPGPPPSVEEVLQKIQQLTSYNYGKSNNF 181

Query: 1822 FQQRNASYTHQTERSQFPQGSNIVNQVVAVKQSTTADXXXXXXXXXXXXXXXXXXXXXIE 1643
            FQ RN+++  QTE+ QFPQG N  +QV     +   +                      +
Sbjct: 182  FQNRNSNFAQQTEKPQFPQGPNGTHQVGKTNAAEPGN-------LNQPAQQSQQPGSQGQ 234

Query: 1642 TQNLPNSLPTEANKTATPLPQGLSRYFIVKSCNRENLELSVQQGVWATQRSNEAKLNEAF 1463
             Q++PN    +A++ ATPLPQG SRYF+VKSCNRENLELSVQQGVWATQRSNEAKLNEAF
Sbjct: 235  LQSIPNDQQNQASRNATPLPQGASRYFVVKSCNRENLELSVQQGVWATQRSNEAKLNEAF 294

Query: 1462 DSIDNVILIFSVNRTRHFQGCAKMTSKIGGFVGGGNWKYAHGTAHYGRNFSVKWLKLCEL 1283
            +S++N+ILIFSVN+TRHFQGCAKMTS+IGG VGGGNWK+AHGTAHYGRNF++KWLKLCEL
Sbjct: 295  ESVENIILIFSVNKTRHFQGCAKMTSRIGGSVGGGNWKHAHGTAHYGRNFALKWLKLCEL 354

Query: 1282 SFHKTRHLRNPYNENLP-----------XXXXXXXXSLLYLEPDSELMAISVXXXXXXXX 1136
            +F KTRHLRNPYNENLP                   SLLYLEPDS+LMAI++        
Sbjct: 355  TFDKTRHLRNPYNENLPVKISRDCQELEPSIGEQLASLLYLEPDSDLMAIAIAAELKREE 414

Query: 1135 XXXKGVNLDDETENPDIVPF---XXXXXXXXXXXXXXXXXSFSQTLSAAQXXXXXXGMMW 965
               KGVN+D+  ENPDIVPF                     F      AQ      GMMW
Sbjct: 415  EKAKGVNIDNGAENPDIVPFEDNEEEEEEEEEEEESEDEDEFPGQAFGAQGRGVGRGMMW 474

Query: 964  APHM-PLARGARPMPGLRGFPPVMMGGDGFTYGAITP---DGFPMPDLFGMAPRAFAPYG 797
             PHM PL RG RP PG+RGFPP MMGGDGF YG   P   DGFPM D FGM PR F  +G
Sbjct: 475  GPHMPPLGRGPRPFPGVRGFPPNMMGGDGFPYGHGPPLNHDGFPMHDPFGMVPRGFGQFG 534

Query: 796  PRFSGDLSGLGQSSAM-------GFTPV--DGTGPTSGMMFHGRP-NQPGNVFXXXXXXX 647
            PRF GD +G      M       GF P+   G GP  G    GRP   P   F       
Sbjct: 535  PRFGGDFAGPASGPMMFAGRPPGGFGPMMGQGRGPFMGGGRGGRPVGMPPPFFPPP---- 590

Query: 646  XXXXXXXXXXXXXXXXMSVAAPVRASXXXXXXXXXXXXXXPLAQNNNNRVVKKDQRRPLD 467
                                 PV A                     N+  VK+DQ+ P  
Sbjct: 591  -------------------PPPVAAQPPP----------------QNSNWVKRDQKAPYS 615

Query: 466  MGQEMAGPGMLDDGKYQSGIKVQCEDSFGGR--NSFRNDESESEDEAPRRSRHGEG-KKR 296
               +++     D GK Q  +          +   S+RNDESESEDEAPRRSRHGEG KKR
Sbjct: 616  DRNDVS-----DQGKGQEIVSGSSNRGNAAKREESYRNDESESEDEAPRRSRHGEGKKKR 670

Query: 295  KDSEVD 278
            + SE +
Sbjct: 671  RGSEAE 676


>ref|XP_006359103.1| PREDICTED: cleavage and polyadenylation specificity factor
            CPSF30-like [Solanum tuberosum]
          Length = 692

 Score =  667 bits (1722), Expect = 0.0
 Identities = 371/709 (52%), Positives = 432/709 (60%), Gaps = 20/709 (2%)
 Frame = -2

Query: 2341 EDPEGVLSFDFEGGLDTAPSNPSAAVPLVPT---DSSVISNTXXXXXXXXXXXXSEPVAG 2171
            ++ EG L+FDFEGGLDT P++P+A+VP++ +    ++   +              +   G
Sbjct: 2    DEGEGGLNFDFEGGLDTGPTHPTASVPVIQSFDHTAAAAPSANINPPTVSAAVGGQSDVG 61

Query: 2170 NNIARRCFRQTVCRHWLRSLCMKGDACGFLHQYDKARMPICRFYRLYGECREQDCVYKHS 1991
                RR FRQTVCRHWLRSLCMKGDACGFLHQYDK+RMPICRF+RLYGECREQDCVYKH+
Sbjct: 62   FVGNRRSFRQTVCRHWLRSLCMKGDACGFLHQYDKSRMPICRFFRLYGECREQDCVYKHT 121

Query: 1990 NEDIKECNMYKLGFCPNGPDCRYRHVKLPGPPPPFEEVVQKIQHQSTFNYGSSNRFFQQR 1811
             EDIKECNMYKLGFCPNGPDCRYRH K+PGPPPP EE++QKIQH +++NYG SNRF Q R
Sbjct: 122  IEDIKECNMYKLGFCPNGPDCRYRHAKMPGPPPPVEEILQKIQHLASYNYGYSNRFNQNR 181

Query: 1810 NASYTHQTERSQFPQGSNIVNQVVAVKQSTTADXXXXXXXXXXXXXXXXXXXXXIETQNL 1631
            NA+Y+ Q+++SQ  Q  N     +AVK + T                        + Q  
Sbjct: 182  NANYSTQSDKSQASQAQN--GMSLAVKSTATETPIIQQHQPNQQVQPPQLQGGPTQAQIH 239

Query: 1630 PNSLPTEANKTATPLPQGLSRYFIVKSCNRENLELSVQQGVWATQRSNEAKLNEAFDSID 1451
            PN    +A++TA  LPQG SRYFIVKSCNRENLELSVQQGVWATQRSNEAKLNEAFDS++
Sbjct: 240  PNGQQNQADRTAVVLPQGTSRYFIVKSCNRENLELSVQQGVWATQRSNEAKLNEAFDSVE 299

Query: 1450 NVILIFSVNRTRHFQGCAKMTSKIGGFVGGGNWKYAHGTAHYGRNFSVKWLKLCELSFHK 1271
            NVILIFSVNRTRHFQGC KMTS+IGG   GGNWK+ HGTAHYGRNFSVKWLKLCELSF K
Sbjct: 300  NVILIFSVNRTRHFQGCGKMTSRIGGAANGGNWKHEHGTAHYGRNFSVKWLKLCELSFQK 359

Query: 1270 TRHLRNPYNENLP-----------XXXXXXXXSLLYLEPDSELMAISVXXXXXXXXXXXK 1124
            T HLRNPYNENLP                   SLLYLEPDSELMAIS+           K
Sbjct: 360  THHLRNPYNENLPVKISRDCQELEPSVGEQLASLLYLEPDSELMAISLAAESKRQEEKAK 419

Query: 1123 GVNLDDETENPDIVPF---XXXXXXXXXXXXXXXXXSFSQTLS-AAQXXXXXXGMMWAPH 956
            GVN D+  +NPDIVPF                    SF Q    AA       G+ W P 
Sbjct: 420  GVNPDNGKDNPDIVPFEDNEEEEEEEEEEESEDEDESFDQGFGPAALGRGRGRGIAWPPI 479

Query: 955  MPLARGARPMPGLRGFPPVMMGGDGFTYGAITPDGFPMPDLFGMAPRAFAPYGPRFSGDL 776
            MP   G RP PG+RGFPP MM GDGF+YGA+TP+GFPMPD FGM PR F PYGP FS DL
Sbjct: 480  MPFGHGPRPPPGMRGFPPGMM-GDGFSYGAMTPEGFPMPDHFGMGPRPFGPYGPPFSSDL 538

Query: 775  SGLGQSSAMGFTPVDGTG--PTSGMMFHGRPNQPGNVFXXXXXXXXXXXXXXXXXXXXXX 602
               G+  A GF  + G G  P  G M  G    P                          
Sbjct: 539  MFHGRPPAGGFGMMMGPGRPPFMGGMGPGATGPPRAGRAVGMHPSFVPPSSQPSQYPYKA 598

Query: 601  XMSVAAPVRASXXXXXXXXXXXXXXPLAQNNNNRVVKKDQRRPLDMGQEMAGPGMLDDGK 422
                 APV                     ++ N     DQ +    GQEM G     DG 
Sbjct: 599  KREQRAPV---------------------SDRNDRFSSDQGK----GQEMMGSVGGPDGV 633

Query: 421  YQSGIKVQCEDSFGGRNSFRNDESESEDEAPRRSRHGEGKKRKDSEVDE 275
            +    K + ++ FG  NS +N+ESESEDEAPRRSRHG+GKK++  +VDE
Sbjct: 634  HMQIGKSEHDNQFGAGNSQKNEESESEDEAPRRSRHGDGKKKR-RDVDE 681


>ref|XP_004231555.1| PREDICTED: cleavage and polyadenylation specificity factor
            CPSF30-like [Solanum lycopersicum]
          Length = 689

 Score =  666 bits (1719), Expect = 0.0
 Identities = 370/706 (52%), Positives = 432/706 (61%), Gaps = 17/706 (2%)
 Frame = -2

Query: 2341 EDPEGVLSFDFEGGLDTAPSNPSAAVPLVPT--DSSVISNTXXXXXXXXXXXXSEPVAGN 2168
            ++ EG L+FDFEGGLDT P++P+A+VP++ +   ++  +++             +   G 
Sbjct: 2    DEGEGGLNFDFEGGLDTGPTHPTASVPVIQSFDHTAAAASSANINPPTVPAVGGQGDVGF 61

Query: 2167 NIARRCFRQTVCRHWLRSLCMKGDACGFLHQYDKARMPICRFYRLYGECREQDCVYKHSN 1988
               RR FRQTVCRHWLRSLCMKGDACGFLHQYDK+RMPICRF+RLYGECREQDCVYKH+ 
Sbjct: 62   VGNRRSFRQTVCRHWLRSLCMKGDACGFLHQYDKSRMPICRFFRLYGECREQDCVYKHTI 121

Query: 1987 EDIKECNMYKLGFCPNGPDCRYRHVKLPGPPPPFEEVVQKIQHQSTFNYGSSNRFFQQRN 1808
            EDIKECNMYKLGFCPNGPDCRYRH K+PGPPPP EE++QKIQH ++ NYG SNRF Q RN
Sbjct: 122  EDIKECNMYKLGFCPNGPDCRYRHAKMPGPPPPVEEILQKIQHLASNNYGYSNRFNQNRN 181

Query: 1807 ASYTHQTERSQFPQGSNIVNQVVAVKQSTTADXXXXXXXXXXXXXXXXXXXXXIETQNLP 1628
            A+Y+ QT++SQ  Q  N     +AVK + T                        + Q  P
Sbjct: 182  ANYSTQTDKSQASQAQN--GTSLAVKSTATETPIIQQHQPHQQVQPPQLQGGPTQAQIHP 239

Query: 1627 NSLPTEANKTATPLPQGLSRYFIVKSCNRENLELSVQQGVWATQRSNEAKLNEAFDSIDN 1448
            N    +A++TA  LPQG SRYFIVKSCNRENLELSVQQGVWATQRSNEAKLNEAFDS++N
Sbjct: 240  NGQQNQADRTAVVLPQGTSRYFIVKSCNRENLELSVQQGVWATQRSNEAKLNEAFDSVEN 299

Query: 1447 VILIFSVNRTRHFQGCAKMTSKIGGFVGGGNWKYAHGTAHYGRNFSVKWLKLCELSFHKT 1268
            VILIFSVNRTRHFQGC KMTS+IGG   GGNWK+ HGTAHYGRNFS+KWLKLCELSF KT
Sbjct: 300  VILIFSVNRTRHFQGCGKMTSRIGGAANGGNWKHEHGTAHYGRNFSLKWLKLCELSFQKT 359

Query: 1267 RHLRNPYNENLP-----------XXXXXXXXSLLYLEPDSELMAISVXXXXXXXXXXXKG 1121
             HLRNPYNENLP                   SLLYLEPDSELMAIS+           KG
Sbjct: 360  HHLRNPYNENLPVKISRDCQELEPSVGEQLASLLYLEPDSELMAISLAAESKRLEEKAKG 419

Query: 1120 VNLDDETENPDIVPF-XXXXXXXXXXXXXXXXXSFSQTLS-AAQXXXXXXGMMWAPHMPL 947
            VN D+  +NPDIVPF                  +F Q    AA       G+ W P MP 
Sbjct: 420  VNPDNGKDNPDIVPFEDNEEEEDEEEESEDEDENFDQGFGPAALGRGRGRGIAWPPIMPF 479

Query: 946  ARGARPMPGLRGFPPVMMGGDGFTYGAITPDGFPMPDLFGMAPRAFAPYGPRFSGDLSGL 767
              G RP PG+RGFPP MM GDGF+YGA+TP+GFPM D FGM PR F PYGPRFS DL   
Sbjct: 480  GHGPRPPPGMRGFPPGMM-GDGFSYGAMTPEGFPMTDHFGMGPRPFPPYGPRFSSDLMFH 538

Query: 766  GQSSAMGFTPVDGTG--PTSGMMFHGRPNQPGNVFXXXXXXXXXXXXXXXXXXXXXXXMS 593
            G+  A GF  + G G  P  G M  G    P                             
Sbjct: 539  GRPPAGGFGMMIGPGRPPFVGGMGPGATGPPRAGRAVRMHPSFIPPSSQPSQYPYRAKRE 598

Query: 592  VAAPVRASXXXXXXXXXXXXXXPLAQNNNNRVVKKDQRRPLDMGQEMAGPGMLDDGKYQS 413
              APV                     ++ N     DQ +    GQEM G     DG +  
Sbjct: 599  QRAPV---------------------SDRNDRFSSDQGK----GQEMMGSVNGPDGVHMQ 633

Query: 412  GIKVQCEDSFGGRNSFRNDESESEDEAPRRSRHGEGKKRKDSEVDE 275
              K + ++ FG  NS +ND SESEDEAPRRSRHG+GKK++  +VDE
Sbjct: 634  IGKSEHDNQFGAGNSLKNDGSESEDEAPRRSRHGDGKKKR-RDVDE 678


>ref|XP_006352991.1| PREDICTED: cleavage and polyadenylation specificity factor
            CPSF30-like [Solanum tuberosum]
          Length = 677

 Score =  659 bits (1699), Expect = 0.0
 Identities = 372/714 (52%), Positives = 437/714 (61%), Gaps = 29/714 (4%)
 Frame = -2

Query: 2341 EDPEGVLSFDFEGGLDTAPSNPSAAVPLVPTDSSVISNTXXXXXXXXXXXXSEPVAGNNI 2162
            +D EG L+FDFEGGLDT P++P+A+VP++ +   + +                   G + 
Sbjct: 2    DDGEGGLNFDFEGGLDTGPTHPTASVPVLQSAGHITTGPAPNASVALVPPGGGVGQGGDG 61

Query: 2161 A----RRCFRQTVCRHWLRSLCMKGDACGFLHQYDKARMPICRFYRLYGECREQDCVYKH 1994
            +    RR FRQTVCRHWLRSLCMKGDACGFLHQYDK+RMP+CRF+RLYGECREQDCVYKH
Sbjct: 62   SFVGNRRSFRQTVCRHWLRSLCMKGDACGFLHQYDKSRMPVCRFFRLYGECREQDCVYKH 121

Query: 1993 SNEDIKECNMYKLGFCPNGPDCRYRHVKLPGPPPPFEEVVQKIQHQSTFNYGSSNRFFQQ 1814
            +NEDIKECNMYKLGFCPNGPDCRYRH KLPGPPPP  EV+Q+IQ+ ++  YG SNRFFQ 
Sbjct: 122  TNEDIKECNMYKLGFCPNGPDCRYRHAKLPGPPPPVVEVLQRIQNLTS--YGYSNRFFQN 179

Query: 1813 RNASYTHQTERSQFPQGSNIVNQVVAVKQSTTADXXXXXXXXXXXXXXXXXXXXXI--ET 1640
            RN +Y+ Q ++SQ PQ  N++NQ V   +ST A+                        +T
Sbjct: 180  RNTNYSTQADKSQIPQVPNVMNQAV---KSTAAEPPIGQPHQPHQQQVQQPQHQGAPTQT 236

Query: 1639 QNLPNSLPTEANKTATPLPQGLSRYFIVKSCNRENLELSVQQGVWATQRSNEAKLNEAFD 1460
            Q LP+S   + N+ A PLPQG SRYFIVKSCNRENLELSVQQGVWATQRSNEAKLNEAFD
Sbjct: 237  QTLPSS---QQNQAAIPLPQGPSRYFIVKSCNRENLELSVQQGVWATQRSNEAKLNEAFD 293

Query: 1459 SIDNVILIFSVNRTRHFQGCAKMTSKIGGFVGGGNWKYAHGTAHYGRNFSVKWLKLCELS 1280
            S++NVIL+FS+NRTRHFQG AKMTS+IGG   GGNWK+ HGTAHYGRNFS+KWLKLCELS
Sbjct: 294  SVENVILVFSINRTRHFQGLAKMTSRIGGAAKGGNWKHEHGTAHYGRNFSLKWLKLCELS 353

Query: 1279 FHKTRHLRNPYNENLP-----------XXXXXXXXSLLYLEPDSELMAISVXXXXXXXXX 1133
            F KTRHLRNPYNENLP                   SLLY+EPDSELMA+S+         
Sbjct: 354  FQKTRHLRNPYNENLPVKISRDCQELEISVGEQLASLLYVEPDSELMAVSLAAESKREEE 413

Query: 1132 XXKGVNLDDETENPDIVPF-XXXXXXXXXXXXXXXXXSFSQTLS-AAQXXXXXXGMMWAP 959
              KGVN D+  ENPDIVPF                   F Q    AA       G++W P
Sbjct: 414  RAKGVNPDNGNENPDIVPFEDNEEEEEEESEEEEEDEGFGQAFGPAALGRGRGRGIVWPP 473

Query: 958  HMPLARGARPMPGLRGFPPVMMGGDGFTYGAITPDGFPMPDLFGMAPRAFAPYGPRFSGD 779
             +P  RGARP PG+RGFPP MM  DGF+YG++TPDGFPMPD +GM  R F P+GPRF GD
Sbjct: 474  LVPFGRGARPFPGMRGFPPGMM-SDGFSYGSMTPDGFPMPDPYGMGGRPFGPFGPRFPGD 532

Query: 778  LSGLGQSSAMGFTPVDGTGPTSGMMFHGRPNQPGNVFXXXXXXXXXXXXXXXXXXXXXXX 599
            +    +  A G     G G    MM  GRP   G +                        
Sbjct: 533  MMFHSRPPAAG-----GFGM---MMGPGRPPFMGGM-----------------------G 561

Query: 598  MSVAAPVRASXXXXXXXXXXXXXXPLAQNNNNRVVKKDQRRPLDMGQEMAGPGMLDDGKY 419
                 P R                P +QN     VKKDQR P +   +    G  D G+ 
Sbjct: 562  PGAPGPPRGGRPMGIHPSFIPPTPPPSQNPR---VKKDQRAPFNERNDRFSSGP-DQGRG 617

Query: 418  QSGIKVQCEDSFGG----------RNSFRNDESESEDEAPRRSRHGEGKKRKDS 287
            Q     +   S GG           NSFRNDESESEDEAPRRSRHG+GKK+K+S
Sbjct: 618  Q-----EIAGSVGGPAEGVHYPQTENSFRNDESESEDEAPRRSRHGDGKKKKNS 666