BLASTX nr result
ID: Akebia27_contig00004937
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Akebia27_contig00004937
(389 letters)
Database: ./nr
38,876,450 sequences; 13,856,398,315 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002517008.1| DNA-repair protein XRCC4, putative [Ricinus ... 192 4e-47
ref|XP_006489536.1| PREDICTED: DNA repair protein XRCC4-like [Ci... 187 2e-45
ref|XP_007035006.1| DNA ligase iv-binding protein XRCC4 isoform ... 184 8e-45
ref|XP_007035005.1| DNA ligase iv-binding protein XRCC4 isoform ... 184 8e-45
ref|XP_007035004.1| DNA repair protein XRCC4, putative isoform 1... 184 8e-45
ref|XP_006350671.1| PREDICTED: DNA repair protein XRCC4-like iso... 182 3e-44
ref|XP_006420162.1| hypothetical protein CICLE_v10005690mg [Citr... 181 7e-44
ref|XP_007226102.1| hypothetical protein PRUPE_ppa010906mg [Prun... 181 7e-44
ref|XP_006420167.1| hypothetical protein CICLE_v10005689mg [Citr... 181 9e-44
ref|XP_002284388.2| PREDICTED: DNA repair protein XRCC4 [Vitis v... 180 2e-43
emb|CBI26376.3| unnamed protein product [Vitis vinifera] 180 2e-43
ref|XP_006378355.1| hypothetical protein POPTR_0010s08650g [Popu... 180 2e-43
dbj|BAF03494.1| XRCC4 homolog [Populus nigra] 178 6e-43
gb|EXB29874.1| DNA repair protein XRCC4 [Morus notabilis] 178 8e-43
ref|XP_002883399.1| hypothetical protein ARALYDRAFT_479818 [Arab... 177 1e-42
ref|XP_004241021.1| PREDICTED: DNA repair protein XRCC4-like iso... 177 2e-42
ref|XP_004136882.1| PREDICTED: DNA repair protein XRCC4-like [Cu... 176 4e-42
ref|NP_188951.2| DNA repair protein XRCC4-like protein [Arabidop... 173 3e-41
ref|XP_006298402.1| hypothetical protein CARUB_v10014474mg [Caps... 173 3e-41
dbj|BAD43030.1| putative double strand break repair protein (XRC... 173 3e-41
>ref|XP_002517008.1| DNA-repair protein XRCC4, putative [Ricinus communis]
gi|223543643|gb|EEF45171.1| DNA-repair protein XRCC4,
putative [Ricinus communis]
Length = 265
Score = 192 bits (488), Expect = 4e-47
Identities = 86/122 (70%), Positives = 101/122 (82%)
Frame = +1
Query: 19 DSTRHTCLRLEITERAENENPEVIFIKATWFDSHFDLSITSGLDAWICNASEAEVRERAN 198
++ RHTCL+LEITE IF+K TWFDSHF LSIT GL+AW+CNA+E +V+ERA
Sbjct: 11 ETARHTCLKLEITEP--------IFVKGTWFDSHFHLSITDGLNAWVCNATEGQVKERAA 62
Query: 199 QWDQPVSEYIETAERYLGFRQPGSIYSFVDAGNGYKRLSWTFEKQGTKLEWRWKCKPSPN 378
QWDQPVSEYI AE YLGF+QPGSIY F DAG+ +KRLSWTFEK+GTKLEWRWKC+PSP+
Sbjct: 63 QWDQPVSEYINLAEHYLGFQQPGSIYRFADAGDSHKRLSWTFEKEGTKLEWRWKCQPSPD 122
Query: 379 NK 384
NK
Sbjct: 123 NK 124
>ref|XP_006489536.1| PREDICTED: DNA repair protein XRCC4-like [Citrus sinensis]
Length = 256
Score = 187 bits (474), Expect = 2e-45
Identities = 81/120 (67%), Positives = 101/120 (84%)
Frame = +1
Query: 25 TRHTCLRLEITERAENENPEVIFIKATWFDSHFDLSITSGLDAWICNASEAEVRERANQW 204
TRHTCL+LEI++ + IF+K TWF++HFDLSIT GL+ W+CNASE +V++RA QW
Sbjct: 3 TRHTCLKLEISDATDP-----IFVKGTWFETHFDLSITDGLNVWLCNASEEQVKDRAAQW 57
Query: 205 DQPVSEYIETAERYLGFRQPGSIYSFVDAGNGYKRLSWTFEKQGTKLEWRWKCKPSPNNK 384
DQPV+EYI+ AERYLGF+QPGS+Y F DA +G KRLSWTFEK+GTKLEWRWKC P+PN+K
Sbjct: 58 DQPVTEYIKLAERYLGFQQPGSVYGFTDAADGCKRLSWTFEKEGTKLEWRWKCGPAPNSK 117
>ref|XP_007035006.1| DNA ligase iv-binding protein XRCC4 isoform 3 [Theobroma cacao]
gi|508714035|gb|EOY05932.1| DNA ligase iv-binding
protein XRCC4 isoform 3 [Theobroma cacao]
Length = 277
Score = 184 bits (468), Expect = 8e-45
Identities = 82/127 (64%), Positives = 103/127 (81%)
Frame = +1
Query: 4 EVAAMDSTRHTCLRLEITERAENENPEVIFIKATWFDSHFDLSITSGLDAWICNASEAEV 183
E ++ +TRHTCL+LEI + E IF+K TWFD+HFD+SIT GL AW+CNA+E EV
Sbjct: 2 ETSSSSTTRHTCLKLEIP------STEPIFVKGTWFDAHFDISITDGLHAWVCNATEEEV 55
Query: 184 RERANQWDQPVSEYIETAERYLGFRQPGSIYSFVDAGNGYKRLSWTFEKQGTKLEWRWKC 363
+ERA QWDQPV+EYIE AERYLGF+Q GS+Y F DAG+ +KRLSW FEK+GTKLEWRWK
Sbjct: 56 KERAAQWDQPVTEYIELAERYLGFQQSGSVYRFADAGDDHKRLSWAFEKEGTKLEWRWKF 115
Query: 364 KPSPNNK 384
+PSP+++
Sbjct: 116 RPSPDSQ 122
>ref|XP_007035005.1| DNA ligase iv-binding protein XRCC4 isoform 2 [Theobroma cacao]
gi|508714034|gb|EOY05931.1| DNA ligase iv-binding
protein XRCC4 isoform 2 [Theobroma cacao]
Length = 276
Score = 184 bits (468), Expect = 8e-45
Identities = 82/127 (64%), Positives = 103/127 (81%)
Frame = +1
Query: 4 EVAAMDSTRHTCLRLEITERAENENPEVIFIKATWFDSHFDLSITSGLDAWICNASEAEV 183
E ++ +TRHTCL+LEI + E IF+K TWFD+HFD+SIT GL AW+CNA+E EV
Sbjct: 2 ETSSSSTTRHTCLKLEIP------STEPIFVKGTWFDAHFDISITDGLHAWVCNATEEEV 55
Query: 184 RERANQWDQPVSEYIETAERYLGFRQPGSIYSFVDAGNGYKRLSWTFEKQGTKLEWRWKC 363
+ERA QWDQPV+EYIE AERYLGF+Q GS+Y F DAG+ +KRLSW FEK+GTKLEWRWK
Sbjct: 56 KERAAQWDQPVTEYIELAERYLGFQQSGSVYRFADAGDDHKRLSWAFEKEGTKLEWRWKF 115
Query: 364 KPSPNNK 384
+PSP+++
Sbjct: 116 RPSPDSQ 122
>ref|XP_007035004.1| DNA repair protein XRCC4, putative isoform 1 [Theobroma cacao]
gi|508714033|gb|EOY05930.1| DNA repair protein XRCC4,
putative isoform 1 [Theobroma cacao]
Length = 263
Score = 184 bits (468), Expect = 8e-45
Identities = 82/127 (64%), Positives = 103/127 (81%)
Frame = +1
Query: 4 EVAAMDSTRHTCLRLEITERAENENPEVIFIKATWFDSHFDLSITSGLDAWICNASEAEV 183
E ++ +TRHTCL+LEI + E IF+K TWFD+HFD+SIT GL AW+CNA+E EV
Sbjct: 2 ETSSSSTTRHTCLKLEIP------STEPIFVKGTWFDAHFDISITDGLHAWVCNATEEEV 55
Query: 184 RERANQWDQPVSEYIETAERYLGFRQPGSIYSFVDAGNGYKRLSWTFEKQGTKLEWRWKC 363
+ERA QWDQPV+EYIE AERYLGF+Q GS+Y F DAG+ +KRLSW FEK+GTKLEWRWK
Sbjct: 56 KERAAQWDQPVTEYIELAERYLGFQQSGSVYRFADAGDDHKRLSWAFEKEGTKLEWRWKF 115
Query: 364 KPSPNNK 384
+PSP+++
Sbjct: 116 RPSPDSQ 122
>ref|XP_006350671.1| PREDICTED: DNA repair protein XRCC4-like isoform X1 [Solanum
tuberosum]
Length = 267
Score = 182 bits (463), Expect = 3e-44
Identities = 83/121 (68%), Positives = 97/121 (80%)
Frame = +1
Query: 22 STRHTCLRLEITERAENENPEVIFIKATWFDSHFDLSITSGLDAWICNASEAEVRERANQ 201
S +HTCL+L I+ N E IF+K TWF SHFDL IT GL +W C+ASE EV ERA+Q
Sbjct: 5 SPKHTCLKLVIS------NKEQIFVKGTWFSSHFDLFITDGLQSWTCHASEEEVEERASQ 58
Query: 202 WDQPVSEYIETAERYLGFRQPGSIYSFVDAGNGYKRLSWTFEKQGTKLEWRWKCKPSPNN 381
WDQPVSEYI+ AE+YLGF+QPGS Y F DAG G+KRLSWTFEK+GTKLEWRWKC+PS N+
Sbjct: 59 WDQPVSEYIDLAEKYLGFQQPGSAYGFDDAGTGHKRLSWTFEKEGTKLEWRWKCQPSSNS 118
Query: 382 K 384
K
Sbjct: 119 K 119
>ref|XP_006420162.1| hypothetical protein CICLE_v10005690mg [Citrus clementina]
gi|557522035|gb|ESR33402.1| hypothetical protein
CICLE_v10005690mg [Citrus clementina]
Length = 256
Score = 181 bits (460), Expect = 7e-44
Identities = 79/123 (64%), Positives = 100/123 (81%)
Frame = +1
Query: 16 MDSTRHTCLRLEITERAENENPEVIFIKATWFDSHFDLSITSGLDAWICNASEAEVRERA 195
M++T HTCL+LEI + + IF+K TWF +HFDLSIT GL+AW+CNASE +V++RA
Sbjct: 1 MEATSHTCLKLEIPDATDP-----IFVKGTWFQTHFDLSITDGLNAWLCNASEEQVKDRA 55
Query: 196 NQWDQPVSEYIETAERYLGFRQPGSIYSFVDAGNGYKRLSWTFEKQGTKLEWRWKCKPSP 375
WDQPV+EY++ AERYLGF+QPGS+Y F DA +G KRLSWTFEK+GTKLEWRWKC +P
Sbjct: 56 ALWDQPVTEYVKLAERYLGFQQPGSVYGFTDAADGCKRLSWTFEKEGTKLEWRWKCGSAP 115
Query: 376 NNK 384
N+K
Sbjct: 116 NSK 118
>ref|XP_007226102.1| hypothetical protein PRUPE_ppa010906mg [Prunus persica]
gi|462423038|gb|EMJ27301.1| hypothetical protein
PRUPE_ppa010906mg [Prunus persica]
Length = 231
Score = 181 bits (460), Expect = 7e-44
Identities = 80/121 (66%), Positives = 99/121 (81%)
Frame = +1
Query: 22 STRHTCLRLEITERAENENPEVIFIKATWFDSHFDLSITSGLDAWICNASEAEVRERANQ 201
S +HTCL+L++ E + I++K TWF+S FDLSIT GL+AWIC+ASE +VR+RA Q
Sbjct: 57 SPKHTCLKLQLKEAQQP-----IYVKGTWFESRFDLSITDGLNAWICHASEEQVRDRAAQ 111
Query: 202 WDQPVSEYIETAERYLGFRQPGSIYSFVDAGNGYKRLSWTFEKQGTKLEWRWKCKPSPNN 381
WDQPVSEY+ AERYLGF+ P S Y F DAG+G+KRLSWTFEK+GTKLEWRWKC+PSPN+
Sbjct: 112 WDQPVSEYVALAERYLGFQHPDSAYGFADAGDGHKRLSWTFEKEGTKLEWRWKCQPSPNS 171
Query: 382 K 384
K
Sbjct: 172 K 172
>ref|XP_006420167.1| hypothetical protein CICLE_v10005689mg [Citrus clementina]
gi|557522040|gb|ESR33407.1| hypothetical protein
CICLE_v10005689mg [Citrus clementina]
Length = 256
Score = 181 bits (459), Expect = 9e-44
Identities = 81/120 (67%), Positives = 98/120 (81%)
Frame = +1
Query: 25 TRHTCLRLEITERAENENPEVIFIKATWFDSHFDLSITSGLDAWICNASEAEVRERANQW 204
TRHTCL+LEI + + IF K TWF +HFDLSIT GL+AW+CNASE +V++RA QW
Sbjct: 3 TRHTCLKLEIPDATDP-----IFAKGTWFQTHFDLSITDGLNAWLCNASEEQVKDRAAQW 57
Query: 205 DQPVSEYIETAERYLGFRQPGSIYSFVDAGNGYKRLSWTFEKQGTKLEWRWKCKPSPNNK 384
DQPV+EYI+ AERYLGF+QPGS+Y F DA +G KRLSWTFEK+GTKLEWRWK P+PN+K
Sbjct: 58 DQPVTEYIKLAERYLGFQQPGSVYGFTDAADGCKRLSWTFEKEGTKLEWRWKFGPAPNSK 117
>ref|XP_002284388.2| PREDICTED: DNA repair protein XRCC4 [Vitis vinifera]
Length = 259
Score = 180 bits (457), Expect = 2e-43
Identities = 82/120 (68%), Positives = 100/120 (83%)
Frame = +1
Query: 28 RHTCLRLEITERAENENPEVIFIKATWFDSHFDLSITSGLDAWICNASEAEVRERANQWD 207
RH+CL+L+I ++E IFIKATWF SHF LSIT GL AW+CNASE EVRERA QWD
Sbjct: 6 RHSCLKLQIPNQSEP-----IFIKATWFPSHFHLSITDGLHAWLCNASEDEVRERAAQWD 60
Query: 208 QPVSEYIETAERYLGFRQPGSIYSFVDAGNGYKRLSWTFEKQGTKLEWRWKCKPSPNNKN 387
QPVS+YI AER+LGF+QPGS+Y F DAG+G++RLSWTFEK+GTKLEWRWKC SP++++
Sbjct: 61 QPVSDYIALAERFLGFQQPGSVYGFSDAGDGHRRLSWTFEKEGTKLEWRWKCGLSPDSRS 120
>emb|CBI26376.3| unnamed protein product [Vitis vinifera]
Length = 258
Score = 180 bits (457), Expect = 2e-43
Identities = 82/120 (68%), Positives = 100/120 (83%)
Frame = +1
Query: 28 RHTCLRLEITERAENENPEVIFIKATWFDSHFDLSITSGLDAWICNASEAEVRERANQWD 207
RH+CL+L+I ++E IFIKATWF SHF LSIT GL AW+CNASE EVRERA QWD
Sbjct: 6 RHSCLKLQIPNQSEP-----IFIKATWFPSHFHLSITDGLHAWLCNASEDEVRERAAQWD 60
Query: 208 QPVSEYIETAERYLGFRQPGSIYSFVDAGNGYKRLSWTFEKQGTKLEWRWKCKPSPNNKN 387
QPVS+YI AER+LGF+QPGS+Y F DAG+G++RLSWTFEK+GTKLEWRWKC SP++++
Sbjct: 61 QPVSDYIALAERFLGFQQPGSVYGFSDAGDGHRRLSWTFEKEGTKLEWRWKCGLSPDSRS 120
>ref|XP_006378355.1| hypothetical protein POPTR_0010s08650g [Populus trichocarpa]
gi|550329386|gb|ERP56152.1| hypothetical protein
POPTR_0010s08650g [Populus trichocarpa]
Length = 483
Score = 180 bits (456), Expect = 2e-43
Identities = 84/125 (67%), Positives = 99/125 (79%), Gaps = 2/125 (1%)
Frame = +1
Query: 16 MDST--RHTCLRLEITERAENENPEVIFIKATWFDSHFDLSITSGLDAWICNASEAEVRE 189
M+ST RHTCL+LEI PE IFIK TWF HF+LSIT GL++W CNA+E EVR+
Sbjct: 1 MESTMARHTCLKLEI--------PEPIFIKGTWFPFHFNLSITDGLNSWFCNATEEEVRD 52
Query: 190 RANQWDQPVSEYIETAERYLGFRQPGSIYSFVDAGNGYKRLSWTFEKQGTKLEWRWKCKP 369
RA QWDQPVS YI+ AE++LGF+ PGS+Y F DAG G KRLSWTFEK+GTKLEWRWKC+P
Sbjct: 53 RAAQWDQPVSTYIQLAEKHLGFQIPGSVYKFTDAGEGNKRLSWTFEKEGTKLEWRWKCQP 112
Query: 370 SPNNK 384
SP+ K
Sbjct: 113 SPDTK 117
>dbj|BAF03494.1| XRCC4 homolog [Populus nigra]
Length = 255
Score = 178 bits (452), Expect = 6e-43
Identities = 84/125 (67%), Positives = 98/125 (78%), Gaps = 2/125 (1%)
Frame = +1
Query: 16 MDST--RHTCLRLEITERAENENPEVIFIKATWFDSHFDLSITSGLDAWICNASEAEVRE 189
M+ST RHTCL+LEI PE IFIK TWF HF+LSIT GL++W CNA+E EVR
Sbjct: 1 MESTMARHTCLKLEI--------PEPIFIKGTWFPFHFNLSITDGLNSWFCNATEEEVRG 52
Query: 190 RANQWDQPVSEYIETAERYLGFRQPGSIYSFVDAGNGYKRLSWTFEKQGTKLEWRWKCKP 369
RA QWDQPVS YI+ AE++LGF+ PGS+Y F DAG G KRLSWTFEK+GTKLEWRWKC+P
Sbjct: 53 RAAQWDQPVSTYIQLAEKHLGFQIPGSVYKFTDAGEGNKRLSWTFEKEGTKLEWRWKCQP 112
Query: 370 SPNNK 384
SP+ K
Sbjct: 113 SPDTK 117
>gb|EXB29874.1| DNA repair protein XRCC4 [Morus notabilis]
Length = 257
Score = 178 bits (451), Expect = 8e-43
Identities = 78/122 (63%), Positives = 100/122 (81%)
Frame = +1
Query: 19 DSTRHTCLRLEITERAENENPEVIFIKATWFDSHFDLSITSGLDAWICNASEAEVRERAN 198
+S RHTCL+LE ++ + IF+ ATWF SHF+LS+T G AWIC+ASE EVR+RA
Sbjct: 3 ESKRHTCLKLE------PKDSDPIFVNATWFPSHFNLSVTDGHHAWICHASEEEVRDRAA 56
Query: 199 QWDQPVSEYIETAERYLGFRQPGSIYSFVDAGNGYKRLSWTFEKQGTKLEWRWKCKPSPN 378
QWDQPV EY+ AERYLGF+QP S+Y+F DAG+G+KRLSWTFEK+GTKL+WRWKC+P+P+
Sbjct: 57 QWDQPVPEYVALAERYLGFQQPDSVYAFADAGDGHKRLSWTFEKEGTKLQWRWKCQPAPD 116
Query: 379 NK 384
+K
Sbjct: 117 SK 118
>ref|XP_002883399.1| hypothetical protein ARALYDRAFT_479818 [Arabidopsis lyrata subsp.
lyrata] gi|297329239|gb|EFH59658.1| hypothetical protein
ARALYDRAFT_479818 [Arabidopsis lyrata subsp. lyrata]
Length = 248
Score = 177 bits (449), Expect = 1e-42
Identities = 80/122 (65%), Positives = 96/122 (78%)
Frame = +1
Query: 19 DSTRHTCLRLEITERAENENPEVIFIKATWFDSHFDLSITSGLDAWICNASEAEVRERAN 198
+ T+HTCLRLEI+ + IF+K TW +SHFD+S+T G +WICNA+E EV ERA
Sbjct: 5 EKTKHTCLRLEIS------GADPIFVKGTWHNSHFDISVTDGSSSWICNATEEEVAERAA 58
Query: 199 QWDQPVSEYIETAERYLGFRQPGSIYSFVDAGNGYKRLSWTFEKQGTKLEWRWKCKPSPN 378
QWDQPVSEY+E AERYLGF+QP S+Y F DA G KRLSWTFEK+GTKLEWRWKCKPS +
Sbjct: 59 QWDQPVSEYLELAERYLGFQQPNSVYGFSDALEGSKRLSWTFEKEGTKLEWRWKCKPSHD 118
Query: 379 NK 384
+K
Sbjct: 119 SK 120
>ref|XP_004241021.1| PREDICTED: DNA repair protein XRCC4-like isoform 1 [Solanum
lycopersicum]
Length = 254
Score = 177 bits (448), Expect = 2e-42
Identities = 80/121 (66%), Positives = 96/121 (79%)
Frame = +1
Query: 22 STRHTCLRLEITERAENENPEVIFIKATWFDSHFDLSITSGLDAWICNASEAEVRERANQ 201
S +HTCL+L I+ N E IF+K TWF S+FDL IT GL +W C+ASE EV ERA+Q
Sbjct: 5 SPKHTCLKLVIS------NKEQIFVKGTWFSSYFDLFITDGLHSWTCHASEEEVEERASQ 58
Query: 202 WDQPVSEYIETAERYLGFRQPGSIYSFVDAGNGYKRLSWTFEKQGTKLEWRWKCKPSPNN 381
WDQPVSEYI+ E+YLGF+QPGS+Y F DAG G+KRLSWTFEK+GTKLEWRWKC+ S N+
Sbjct: 59 WDQPVSEYIDLGEKYLGFQQPGSVYGFDDAGTGHKRLSWTFEKEGTKLEWRWKCQSSSNS 118
Query: 382 K 384
K
Sbjct: 119 K 119
>ref|XP_004136882.1| PREDICTED: DNA repair protein XRCC4-like [Cucumis sativus]
gi|449478860|ref|XP_004155437.1| PREDICTED: DNA repair
protein XRCC4-like [Cucumis sativus]
Length = 233
Score = 176 bits (445), Expect = 4e-42
Identities = 78/123 (63%), Positives = 93/123 (75%)
Frame = +1
Query: 16 MDSTRHTCLRLEITERAENENPEVIFIKATWFDSHFDLSITSGLDAWICNASEAEVRERA 195
MD+ RHTCL+LE+ A+ IF+K TW FDLSIT G AW C+A+E EVR RA
Sbjct: 1 MDAIRHTCLKLEVPTNAQPNERSSIFVKGTWNHLRFDLSITDGFHAWTCHATEDEVRLRA 60
Query: 196 NQWDQPVSEYIETAERYLGFRQPGSIYSFVDAGNGYKRLSWTFEKQGTKLEWRWKCKPSP 375
QWDQ S+Y+ AERYLGF+QPGSIY F DAGNGYKRLSWTF+K+G KLEWRWKC+P+
Sbjct: 61 AQWDQEPSDYVALAERYLGFQQPGSIYDFADAGNGYKRLSWTFDKEGMKLEWRWKCQPAS 120
Query: 376 NNK 384
+NK
Sbjct: 121 DNK 123
>ref|NP_188951.2| DNA repair protein XRCC4-like protein [Arabidopsis thaliana]
gi|238479872|ref|NP_001154639.1| DNA repair protein
XRCC4-like protein [Arabidopsis thaliana]
gi|85701292|sp|Q682V0.2|XRCC4_ARATH RecName: Full=DNA
repair protein XRCC4 gi|9800643|gb|AAF91285.2|AF233528_1
putative double strand break repair protein [Arabidopsis
thaliana] gi|9294200|dbj|BAB02102.1| unnamed protein
product [Arabidopsis thaliana]
gi|332643196|gb|AEE76717.1| DNA repair protein
XRCC4-like protein [Arabidopsis thaliana]
gi|332643197|gb|AEE76718.1| DNA repair protein
XRCC4-like protein [Arabidopsis thaliana]
Length = 264
Score = 173 bits (438), Expect = 3e-41
Identities = 78/122 (63%), Positives = 96/122 (78%)
Frame = +1
Query: 19 DSTRHTCLRLEITERAENENPEVIFIKATWFDSHFDLSITSGLDAWICNASEAEVRERAN 198
+ T+HTCLRLEI+ + IF+K TW +S FD+S+T G +WICNA+E EV ERA
Sbjct: 21 EKTKHTCLRLEIS------GADPIFVKGTWHNSRFDISVTDGSSSWICNATEEEVAERAA 74
Query: 199 QWDQPVSEYIETAERYLGFRQPGSIYSFVDAGNGYKRLSWTFEKQGTKLEWRWKCKPSPN 378
QWDQPVSEY++ AE+YLGF+QP S+YSF DA G KRLSWTFEK+GTKLEWRWKCKPS +
Sbjct: 75 QWDQPVSEYLKLAEQYLGFQQPNSVYSFSDALEGSKRLSWTFEKEGTKLEWRWKCKPSDD 134
Query: 379 NK 384
+K
Sbjct: 135 SK 136
>ref|XP_006298402.1| hypothetical protein CARUB_v10014474mg [Capsella rubella]
gi|482567111|gb|EOA31300.1| hypothetical protein
CARUB_v10014474mg [Capsella rubella]
Length = 249
Score = 173 bits (438), Expect = 3e-41
Identities = 79/122 (64%), Positives = 95/122 (77%)
Frame = +1
Query: 19 DSTRHTCLRLEITERAENENPEVIFIKATWFDSHFDLSITSGLDAWICNASEAEVRERAN 198
+ T+HTCLRLEI+ + IF+K TW+ S FD+S+T G +WICNA+E EV ERA
Sbjct: 5 ERTKHTCLRLEIS------GADPIFVKGTWYHSRFDISVTDGSSSWICNATEEEVAERAA 58
Query: 199 QWDQPVSEYIETAERYLGFRQPGSIYSFVDAGNGYKRLSWTFEKQGTKLEWRWKCKPSPN 378
QWDQPVSEY+E AE+YLGF+QP SIY F DA G KRLSWTFEK+GTKLEWRWKCKPS +
Sbjct: 59 QWDQPVSEYLELAEQYLGFQQPDSIYGFSDALEGCKRLSWTFEKEGTKLEWRWKCKPSHD 118
Query: 379 NK 384
+K
Sbjct: 119 SK 120
>dbj|BAD43030.1| putative double strand break repair protein (XRCC4) [Arabidopsis
thaliana] gi|56461768|gb|AAV91340.1| At1g61410
[Arabidopsis thaliana] gi|61656135|gb|AAX49370.1|
At1g61410 [Arabidopsis thaliana]
Length = 248
Score = 173 bits (438), Expect = 3e-41
Identities = 78/122 (63%), Positives = 96/122 (78%)
Frame = +1
Query: 19 DSTRHTCLRLEITERAENENPEVIFIKATWFDSHFDLSITSGLDAWICNASEAEVRERAN 198
+ T+HTCLRLEI+ + IF+K TW +S FD+S+T G +WICNA+E EV ERA
Sbjct: 5 EKTKHTCLRLEIS------GADPIFVKGTWHNSRFDISVTDGSSSWICNATEEEVAERAA 58
Query: 199 QWDQPVSEYIETAERYLGFRQPGSIYSFVDAGNGYKRLSWTFEKQGTKLEWRWKCKPSPN 378
QWDQPVSEY++ AE+YLGF+QP S+YSF DA G KRLSWTFEK+GTKLEWRWKCKPS +
Sbjct: 59 QWDQPVSEYLKLAEQYLGFQQPNSVYSFSDALEGSKRLSWTFEKEGTKLEWRWKCKPSDD 118
Query: 379 NK 384
+K
Sbjct: 119 SK 120