BLASTX nr result

ID: Akebia27_contig00004937 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Akebia27_contig00004937
         (389 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002517008.1| DNA-repair protein XRCC4, putative [Ricinus ...   192   4e-47
ref|XP_006489536.1| PREDICTED: DNA repair protein XRCC4-like [Ci...   187   2e-45
ref|XP_007035006.1| DNA ligase iv-binding protein XRCC4 isoform ...   184   8e-45
ref|XP_007035005.1| DNA ligase iv-binding protein XRCC4 isoform ...   184   8e-45
ref|XP_007035004.1| DNA repair protein XRCC4, putative isoform 1...   184   8e-45
ref|XP_006350671.1| PREDICTED: DNA repair protein XRCC4-like iso...   182   3e-44
ref|XP_006420162.1| hypothetical protein CICLE_v10005690mg [Citr...   181   7e-44
ref|XP_007226102.1| hypothetical protein PRUPE_ppa010906mg [Prun...   181   7e-44
ref|XP_006420167.1| hypothetical protein CICLE_v10005689mg [Citr...   181   9e-44
ref|XP_002284388.2| PREDICTED: DNA repair protein XRCC4 [Vitis v...   180   2e-43
emb|CBI26376.3| unnamed protein product [Vitis vinifera]              180   2e-43
ref|XP_006378355.1| hypothetical protein POPTR_0010s08650g [Popu...   180   2e-43
dbj|BAF03494.1| XRCC4 homolog [Populus nigra]                         178   6e-43
gb|EXB29874.1| DNA repair protein XRCC4 [Morus notabilis]             178   8e-43
ref|XP_002883399.1| hypothetical protein ARALYDRAFT_479818 [Arab...   177   1e-42
ref|XP_004241021.1| PREDICTED: DNA repair protein XRCC4-like iso...   177   2e-42
ref|XP_004136882.1| PREDICTED: DNA repair protein XRCC4-like [Cu...   176   4e-42
ref|NP_188951.2| DNA repair protein XRCC4-like protein [Arabidop...   173   3e-41
ref|XP_006298402.1| hypothetical protein CARUB_v10014474mg [Caps...   173   3e-41
dbj|BAD43030.1| putative double strand break repair protein (XRC...   173   3e-41

>ref|XP_002517008.1| DNA-repair protein XRCC4, putative [Ricinus communis]
           gi|223543643|gb|EEF45171.1| DNA-repair protein XRCC4,
           putative [Ricinus communis]
          Length = 265

 Score =  192 bits (488), Expect = 4e-47
 Identities = 86/122 (70%), Positives = 101/122 (82%)
 Frame = +1

Query: 19  DSTRHTCLRLEITERAENENPEVIFIKATWFDSHFDLSITSGLDAWICNASEAEVRERAN 198
           ++ RHTCL+LEITE         IF+K TWFDSHF LSIT GL+AW+CNA+E +V+ERA 
Sbjct: 11  ETARHTCLKLEITEP--------IFVKGTWFDSHFHLSITDGLNAWVCNATEGQVKERAA 62

Query: 199 QWDQPVSEYIETAERYLGFRQPGSIYSFVDAGNGYKRLSWTFEKQGTKLEWRWKCKPSPN 378
           QWDQPVSEYI  AE YLGF+QPGSIY F DAG+ +KRLSWTFEK+GTKLEWRWKC+PSP+
Sbjct: 63  QWDQPVSEYINLAEHYLGFQQPGSIYRFADAGDSHKRLSWTFEKEGTKLEWRWKCQPSPD 122

Query: 379 NK 384
           NK
Sbjct: 123 NK 124


>ref|XP_006489536.1| PREDICTED: DNA repair protein XRCC4-like [Citrus sinensis]
          Length = 256

 Score =  187 bits (474), Expect = 2e-45
 Identities = 81/120 (67%), Positives = 101/120 (84%)
 Frame = +1

Query: 25  TRHTCLRLEITERAENENPEVIFIKATWFDSHFDLSITSGLDAWICNASEAEVRERANQW 204
           TRHTCL+LEI++  +      IF+K TWF++HFDLSIT GL+ W+CNASE +V++RA QW
Sbjct: 3   TRHTCLKLEISDATDP-----IFVKGTWFETHFDLSITDGLNVWLCNASEEQVKDRAAQW 57

Query: 205 DQPVSEYIETAERYLGFRQPGSIYSFVDAGNGYKRLSWTFEKQGTKLEWRWKCKPSPNNK 384
           DQPV+EYI+ AERYLGF+QPGS+Y F DA +G KRLSWTFEK+GTKLEWRWKC P+PN+K
Sbjct: 58  DQPVTEYIKLAERYLGFQQPGSVYGFTDAADGCKRLSWTFEKEGTKLEWRWKCGPAPNSK 117


>ref|XP_007035006.1| DNA ligase iv-binding protein XRCC4 isoform 3 [Theobroma cacao]
           gi|508714035|gb|EOY05932.1| DNA ligase iv-binding
           protein XRCC4 isoform 3 [Theobroma cacao]
          Length = 277

 Score =  184 bits (468), Expect = 8e-45
 Identities = 82/127 (64%), Positives = 103/127 (81%)
 Frame = +1

Query: 4   EVAAMDSTRHTCLRLEITERAENENPEVIFIKATWFDSHFDLSITSGLDAWICNASEAEV 183
           E ++  +TRHTCL+LEI       + E IF+K TWFD+HFD+SIT GL AW+CNA+E EV
Sbjct: 2   ETSSSSTTRHTCLKLEIP------STEPIFVKGTWFDAHFDISITDGLHAWVCNATEEEV 55

Query: 184 RERANQWDQPVSEYIETAERYLGFRQPGSIYSFVDAGNGYKRLSWTFEKQGTKLEWRWKC 363
           +ERA QWDQPV+EYIE AERYLGF+Q GS+Y F DAG+ +KRLSW FEK+GTKLEWRWK 
Sbjct: 56  KERAAQWDQPVTEYIELAERYLGFQQSGSVYRFADAGDDHKRLSWAFEKEGTKLEWRWKF 115

Query: 364 KPSPNNK 384
           +PSP+++
Sbjct: 116 RPSPDSQ 122


>ref|XP_007035005.1| DNA ligase iv-binding protein XRCC4 isoform 2 [Theobroma cacao]
           gi|508714034|gb|EOY05931.1| DNA ligase iv-binding
           protein XRCC4 isoform 2 [Theobroma cacao]
          Length = 276

 Score =  184 bits (468), Expect = 8e-45
 Identities = 82/127 (64%), Positives = 103/127 (81%)
 Frame = +1

Query: 4   EVAAMDSTRHTCLRLEITERAENENPEVIFIKATWFDSHFDLSITSGLDAWICNASEAEV 183
           E ++  +TRHTCL+LEI       + E IF+K TWFD+HFD+SIT GL AW+CNA+E EV
Sbjct: 2   ETSSSSTTRHTCLKLEIP------STEPIFVKGTWFDAHFDISITDGLHAWVCNATEEEV 55

Query: 184 RERANQWDQPVSEYIETAERYLGFRQPGSIYSFVDAGNGYKRLSWTFEKQGTKLEWRWKC 363
           +ERA QWDQPV+EYIE AERYLGF+Q GS+Y F DAG+ +KRLSW FEK+GTKLEWRWK 
Sbjct: 56  KERAAQWDQPVTEYIELAERYLGFQQSGSVYRFADAGDDHKRLSWAFEKEGTKLEWRWKF 115

Query: 364 KPSPNNK 384
           +PSP+++
Sbjct: 116 RPSPDSQ 122


>ref|XP_007035004.1| DNA repair protein XRCC4, putative isoform 1 [Theobroma cacao]
           gi|508714033|gb|EOY05930.1| DNA repair protein XRCC4,
           putative isoform 1 [Theobroma cacao]
          Length = 263

 Score =  184 bits (468), Expect = 8e-45
 Identities = 82/127 (64%), Positives = 103/127 (81%)
 Frame = +1

Query: 4   EVAAMDSTRHTCLRLEITERAENENPEVIFIKATWFDSHFDLSITSGLDAWICNASEAEV 183
           E ++  +TRHTCL+LEI       + E IF+K TWFD+HFD+SIT GL AW+CNA+E EV
Sbjct: 2   ETSSSSTTRHTCLKLEIP------STEPIFVKGTWFDAHFDISITDGLHAWVCNATEEEV 55

Query: 184 RERANQWDQPVSEYIETAERYLGFRQPGSIYSFVDAGNGYKRLSWTFEKQGTKLEWRWKC 363
           +ERA QWDQPV+EYIE AERYLGF+Q GS+Y F DAG+ +KRLSW FEK+GTKLEWRWK 
Sbjct: 56  KERAAQWDQPVTEYIELAERYLGFQQSGSVYRFADAGDDHKRLSWAFEKEGTKLEWRWKF 115

Query: 364 KPSPNNK 384
           +PSP+++
Sbjct: 116 RPSPDSQ 122


>ref|XP_006350671.1| PREDICTED: DNA repair protein XRCC4-like isoform X1 [Solanum
           tuberosum]
          Length = 267

 Score =  182 bits (463), Expect = 3e-44
 Identities = 83/121 (68%), Positives = 97/121 (80%)
 Frame = +1

Query: 22  STRHTCLRLEITERAENENPEVIFIKATWFDSHFDLSITSGLDAWICNASEAEVRERANQ 201
           S +HTCL+L I+      N E IF+K TWF SHFDL IT GL +W C+ASE EV ERA+Q
Sbjct: 5   SPKHTCLKLVIS------NKEQIFVKGTWFSSHFDLFITDGLQSWTCHASEEEVEERASQ 58

Query: 202 WDQPVSEYIETAERYLGFRQPGSIYSFVDAGNGYKRLSWTFEKQGTKLEWRWKCKPSPNN 381
           WDQPVSEYI+ AE+YLGF+QPGS Y F DAG G+KRLSWTFEK+GTKLEWRWKC+PS N+
Sbjct: 59  WDQPVSEYIDLAEKYLGFQQPGSAYGFDDAGTGHKRLSWTFEKEGTKLEWRWKCQPSSNS 118

Query: 382 K 384
           K
Sbjct: 119 K 119


>ref|XP_006420162.1| hypothetical protein CICLE_v10005690mg [Citrus clementina]
           gi|557522035|gb|ESR33402.1| hypothetical protein
           CICLE_v10005690mg [Citrus clementina]
          Length = 256

 Score =  181 bits (460), Expect = 7e-44
 Identities = 79/123 (64%), Positives = 100/123 (81%)
 Frame = +1

Query: 16  MDSTRHTCLRLEITERAENENPEVIFIKATWFDSHFDLSITSGLDAWICNASEAEVRERA 195
           M++T HTCL+LEI +  +      IF+K TWF +HFDLSIT GL+AW+CNASE +V++RA
Sbjct: 1   MEATSHTCLKLEIPDATDP-----IFVKGTWFQTHFDLSITDGLNAWLCNASEEQVKDRA 55

Query: 196 NQWDQPVSEYIETAERYLGFRQPGSIYSFVDAGNGYKRLSWTFEKQGTKLEWRWKCKPSP 375
             WDQPV+EY++ AERYLGF+QPGS+Y F DA +G KRLSWTFEK+GTKLEWRWKC  +P
Sbjct: 56  ALWDQPVTEYVKLAERYLGFQQPGSVYGFTDAADGCKRLSWTFEKEGTKLEWRWKCGSAP 115

Query: 376 NNK 384
           N+K
Sbjct: 116 NSK 118


>ref|XP_007226102.1| hypothetical protein PRUPE_ppa010906mg [Prunus persica]
           gi|462423038|gb|EMJ27301.1| hypothetical protein
           PRUPE_ppa010906mg [Prunus persica]
          Length = 231

 Score =  181 bits (460), Expect = 7e-44
 Identities = 80/121 (66%), Positives = 99/121 (81%)
 Frame = +1

Query: 22  STRHTCLRLEITERAENENPEVIFIKATWFDSHFDLSITSGLDAWICNASEAEVRERANQ 201
           S +HTCL+L++ E  +      I++K TWF+S FDLSIT GL+AWIC+ASE +VR+RA Q
Sbjct: 57  SPKHTCLKLQLKEAQQP-----IYVKGTWFESRFDLSITDGLNAWICHASEEQVRDRAAQ 111

Query: 202 WDQPVSEYIETAERYLGFRQPGSIYSFVDAGNGYKRLSWTFEKQGTKLEWRWKCKPSPNN 381
           WDQPVSEY+  AERYLGF+ P S Y F DAG+G+KRLSWTFEK+GTKLEWRWKC+PSPN+
Sbjct: 112 WDQPVSEYVALAERYLGFQHPDSAYGFADAGDGHKRLSWTFEKEGTKLEWRWKCQPSPNS 171

Query: 382 K 384
           K
Sbjct: 172 K 172


>ref|XP_006420167.1| hypothetical protein CICLE_v10005689mg [Citrus clementina]
           gi|557522040|gb|ESR33407.1| hypothetical protein
           CICLE_v10005689mg [Citrus clementina]
          Length = 256

 Score =  181 bits (459), Expect = 9e-44
 Identities = 81/120 (67%), Positives = 98/120 (81%)
 Frame = +1

Query: 25  TRHTCLRLEITERAENENPEVIFIKATWFDSHFDLSITSGLDAWICNASEAEVRERANQW 204
           TRHTCL+LEI +  +      IF K TWF +HFDLSIT GL+AW+CNASE +V++RA QW
Sbjct: 3   TRHTCLKLEIPDATDP-----IFAKGTWFQTHFDLSITDGLNAWLCNASEEQVKDRAAQW 57

Query: 205 DQPVSEYIETAERYLGFRQPGSIYSFVDAGNGYKRLSWTFEKQGTKLEWRWKCKPSPNNK 384
           DQPV+EYI+ AERYLGF+QPGS+Y F DA +G KRLSWTFEK+GTKLEWRWK  P+PN+K
Sbjct: 58  DQPVTEYIKLAERYLGFQQPGSVYGFTDAADGCKRLSWTFEKEGTKLEWRWKFGPAPNSK 117


>ref|XP_002284388.2| PREDICTED: DNA repair protein XRCC4 [Vitis vinifera]
          Length = 259

 Score =  180 bits (457), Expect = 2e-43
 Identities = 82/120 (68%), Positives = 100/120 (83%)
 Frame = +1

Query: 28  RHTCLRLEITERAENENPEVIFIKATWFDSHFDLSITSGLDAWICNASEAEVRERANQWD 207
           RH+CL+L+I  ++E      IFIKATWF SHF LSIT GL AW+CNASE EVRERA QWD
Sbjct: 6   RHSCLKLQIPNQSEP-----IFIKATWFPSHFHLSITDGLHAWLCNASEDEVRERAAQWD 60

Query: 208 QPVSEYIETAERYLGFRQPGSIYSFVDAGNGYKRLSWTFEKQGTKLEWRWKCKPSPNNKN 387
           QPVS+YI  AER+LGF+QPGS+Y F DAG+G++RLSWTFEK+GTKLEWRWKC  SP++++
Sbjct: 61  QPVSDYIALAERFLGFQQPGSVYGFSDAGDGHRRLSWTFEKEGTKLEWRWKCGLSPDSRS 120


>emb|CBI26376.3| unnamed protein product [Vitis vinifera]
          Length = 258

 Score =  180 bits (457), Expect = 2e-43
 Identities = 82/120 (68%), Positives = 100/120 (83%)
 Frame = +1

Query: 28  RHTCLRLEITERAENENPEVIFIKATWFDSHFDLSITSGLDAWICNASEAEVRERANQWD 207
           RH+CL+L+I  ++E      IFIKATWF SHF LSIT GL AW+CNASE EVRERA QWD
Sbjct: 6   RHSCLKLQIPNQSEP-----IFIKATWFPSHFHLSITDGLHAWLCNASEDEVRERAAQWD 60

Query: 208 QPVSEYIETAERYLGFRQPGSIYSFVDAGNGYKRLSWTFEKQGTKLEWRWKCKPSPNNKN 387
           QPVS+YI  AER+LGF+QPGS+Y F DAG+G++RLSWTFEK+GTKLEWRWKC  SP++++
Sbjct: 61  QPVSDYIALAERFLGFQQPGSVYGFSDAGDGHRRLSWTFEKEGTKLEWRWKCGLSPDSRS 120


>ref|XP_006378355.1| hypothetical protein POPTR_0010s08650g [Populus trichocarpa]
           gi|550329386|gb|ERP56152.1| hypothetical protein
           POPTR_0010s08650g [Populus trichocarpa]
          Length = 483

 Score =  180 bits (456), Expect = 2e-43
 Identities = 84/125 (67%), Positives = 99/125 (79%), Gaps = 2/125 (1%)
 Frame = +1

Query: 16  MDST--RHTCLRLEITERAENENPEVIFIKATWFDSHFDLSITSGLDAWICNASEAEVRE 189
           M+ST  RHTCL+LEI        PE IFIK TWF  HF+LSIT GL++W CNA+E EVR+
Sbjct: 1   MESTMARHTCLKLEI--------PEPIFIKGTWFPFHFNLSITDGLNSWFCNATEEEVRD 52

Query: 190 RANQWDQPVSEYIETAERYLGFRQPGSIYSFVDAGNGYKRLSWTFEKQGTKLEWRWKCKP 369
           RA QWDQPVS YI+ AE++LGF+ PGS+Y F DAG G KRLSWTFEK+GTKLEWRWKC+P
Sbjct: 53  RAAQWDQPVSTYIQLAEKHLGFQIPGSVYKFTDAGEGNKRLSWTFEKEGTKLEWRWKCQP 112

Query: 370 SPNNK 384
           SP+ K
Sbjct: 113 SPDTK 117


>dbj|BAF03494.1| XRCC4 homolog [Populus nigra]
          Length = 255

 Score =  178 bits (452), Expect = 6e-43
 Identities = 84/125 (67%), Positives = 98/125 (78%), Gaps = 2/125 (1%)
 Frame = +1

Query: 16  MDST--RHTCLRLEITERAENENPEVIFIKATWFDSHFDLSITSGLDAWICNASEAEVRE 189
           M+ST  RHTCL+LEI        PE IFIK TWF  HF+LSIT GL++W CNA+E EVR 
Sbjct: 1   MESTMARHTCLKLEI--------PEPIFIKGTWFPFHFNLSITDGLNSWFCNATEEEVRG 52

Query: 190 RANQWDQPVSEYIETAERYLGFRQPGSIYSFVDAGNGYKRLSWTFEKQGTKLEWRWKCKP 369
           RA QWDQPVS YI+ AE++LGF+ PGS+Y F DAG G KRLSWTFEK+GTKLEWRWKC+P
Sbjct: 53  RAAQWDQPVSTYIQLAEKHLGFQIPGSVYKFTDAGEGNKRLSWTFEKEGTKLEWRWKCQP 112

Query: 370 SPNNK 384
           SP+ K
Sbjct: 113 SPDTK 117


>gb|EXB29874.1| DNA repair protein XRCC4 [Morus notabilis]
          Length = 257

 Score =  178 bits (451), Expect = 8e-43
 Identities = 78/122 (63%), Positives = 100/122 (81%)
 Frame = +1

Query: 19  DSTRHTCLRLEITERAENENPEVIFIKATWFDSHFDLSITSGLDAWICNASEAEVRERAN 198
           +S RHTCL+LE       ++ + IF+ ATWF SHF+LS+T G  AWIC+ASE EVR+RA 
Sbjct: 3   ESKRHTCLKLE------PKDSDPIFVNATWFPSHFNLSVTDGHHAWICHASEEEVRDRAA 56

Query: 199 QWDQPVSEYIETAERYLGFRQPGSIYSFVDAGNGYKRLSWTFEKQGTKLEWRWKCKPSPN 378
           QWDQPV EY+  AERYLGF+QP S+Y+F DAG+G+KRLSWTFEK+GTKL+WRWKC+P+P+
Sbjct: 57  QWDQPVPEYVALAERYLGFQQPDSVYAFADAGDGHKRLSWTFEKEGTKLQWRWKCQPAPD 116

Query: 379 NK 384
           +K
Sbjct: 117 SK 118


>ref|XP_002883399.1| hypothetical protein ARALYDRAFT_479818 [Arabidopsis lyrata subsp.
           lyrata] gi|297329239|gb|EFH59658.1| hypothetical protein
           ARALYDRAFT_479818 [Arabidopsis lyrata subsp. lyrata]
          Length = 248

 Score =  177 bits (449), Expect = 1e-42
 Identities = 80/122 (65%), Positives = 96/122 (78%)
 Frame = +1

Query: 19  DSTRHTCLRLEITERAENENPEVIFIKATWFDSHFDLSITSGLDAWICNASEAEVRERAN 198
           + T+HTCLRLEI+        + IF+K TW +SHFD+S+T G  +WICNA+E EV ERA 
Sbjct: 5   EKTKHTCLRLEIS------GADPIFVKGTWHNSHFDISVTDGSSSWICNATEEEVAERAA 58

Query: 199 QWDQPVSEYIETAERYLGFRQPGSIYSFVDAGNGYKRLSWTFEKQGTKLEWRWKCKPSPN 378
           QWDQPVSEY+E AERYLGF+QP S+Y F DA  G KRLSWTFEK+GTKLEWRWKCKPS +
Sbjct: 59  QWDQPVSEYLELAERYLGFQQPNSVYGFSDALEGSKRLSWTFEKEGTKLEWRWKCKPSHD 118

Query: 379 NK 384
           +K
Sbjct: 119 SK 120


>ref|XP_004241021.1| PREDICTED: DNA repair protein XRCC4-like isoform 1 [Solanum
           lycopersicum]
          Length = 254

 Score =  177 bits (448), Expect = 2e-42
 Identities = 80/121 (66%), Positives = 96/121 (79%)
 Frame = +1

Query: 22  STRHTCLRLEITERAENENPEVIFIKATWFDSHFDLSITSGLDAWICNASEAEVRERANQ 201
           S +HTCL+L I+      N E IF+K TWF S+FDL IT GL +W C+ASE EV ERA+Q
Sbjct: 5   SPKHTCLKLVIS------NKEQIFVKGTWFSSYFDLFITDGLHSWTCHASEEEVEERASQ 58

Query: 202 WDQPVSEYIETAERYLGFRQPGSIYSFVDAGNGYKRLSWTFEKQGTKLEWRWKCKPSPNN 381
           WDQPVSEYI+  E+YLGF+QPGS+Y F DAG G+KRLSWTFEK+GTKLEWRWKC+ S N+
Sbjct: 59  WDQPVSEYIDLGEKYLGFQQPGSVYGFDDAGTGHKRLSWTFEKEGTKLEWRWKCQSSSNS 118

Query: 382 K 384
           K
Sbjct: 119 K 119


>ref|XP_004136882.1| PREDICTED: DNA repair protein XRCC4-like [Cucumis sativus]
           gi|449478860|ref|XP_004155437.1| PREDICTED: DNA repair
           protein XRCC4-like [Cucumis sativus]
          Length = 233

 Score =  176 bits (445), Expect = 4e-42
 Identities = 78/123 (63%), Positives = 93/123 (75%)
 Frame = +1

Query: 16  MDSTRHTCLRLEITERAENENPEVIFIKATWFDSHFDLSITSGLDAWICNASEAEVRERA 195
           MD+ RHTCL+LE+   A+      IF+K TW    FDLSIT G  AW C+A+E EVR RA
Sbjct: 1   MDAIRHTCLKLEVPTNAQPNERSSIFVKGTWNHLRFDLSITDGFHAWTCHATEDEVRLRA 60

Query: 196 NQWDQPVSEYIETAERYLGFRQPGSIYSFVDAGNGYKRLSWTFEKQGTKLEWRWKCKPSP 375
            QWDQ  S+Y+  AERYLGF+QPGSIY F DAGNGYKRLSWTF+K+G KLEWRWKC+P+ 
Sbjct: 61  AQWDQEPSDYVALAERYLGFQQPGSIYDFADAGNGYKRLSWTFDKEGMKLEWRWKCQPAS 120

Query: 376 NNK 384
           +NK
Sbjct: 121 DNK 123


>ref|NP_188951.2| DNA repair protein XRCC4-like protein [Arabidopsis thaliana]
           gi|238479872|ref|NP_001154639.1| DNA repair protein
           XRCC4-like protein [Arabidopsis thaliana]
           gi|85701292|sp|Q682V0.2|XRCC4_ARATH RecName: Full=DNA
           repair protein XRCC4 gi|9800643|gb|AAF91285.2|AF233528_1
           putative double strand break repair protein [Arabidopsis
           thaliana] gi|9294200|dbj|BAB02102.1| unnamed protein
           product [Arabidopsis thaliana]
           gi|332643196|gb|AEE76717.1| DNA repair protein
           XRCC4-like protein [Arabidopsis thaliana]
           gi|332643197|gb|AEE76718.1| DNA repair protein
           XRCC4-like protein [Arabidopsis thaliana]
          Length = 264

 Score =  173 bits (438), Expect = 3e-41
 Identities = 78/122 (63%), Positives = 96/122 (78%)
 Frame = +1

Query: 19  DSTRHTCLRLEITERAENENPEVIFIKATWFDSHFDLSITSGLDAWICNASEAEVRERAN 198
           + T+HTCLRLEI+        + IF+K TW +S FD+S+T G  +WICNA+E EV ERA 
Sbjct: 21  EKTKHTCLRLEIS------GADPIFVKGTWHNSRFDISVTDGSSSWICNATEEEVAERAA 74

Query: 199 QWDQPVSEYIETAERYLGFRQPGSIYSFVDAGNGYKRLSWTFEKQGTKLEWRWKCKPSPN 378
           QWDQPVSEY++ AE+YLGF+QP S+YSF DA  G KRLSWTFEK+GTKLEWRWKCKPS +
Sbjct: 75  QWDQPVSEYLKLAEQYLGFQQPNSVYSFSDALEGSKRLSWTFEKEGTKLEWRWKCKPSDD 134

Query: 379 NK 384
           +K
Sbjct: 135 SK 136


>ref|XP_006298402.1| hypothetical protein CARUB_v10014474mg [Capsella rubella]
           gi|482567111|gb|EOA31300.1| hypothetical protein
           CARUB_v10014474mg [Capsella rubella]
          Length = 249

 Score =  173 bits (438), Expect = 3e-41
 Identities = 79/122 (64%), Positives = 95/122 (77%)
 Frame = +1

Query: 19  DSTRHTCLRLEITERAENENPEVIFIKATWFDSHFDLSITSGLDAWICNASEAEVRERAN 198
           + T+HTCLRLEI+        + IF+K TW+ S FD+S+T G  +WICNA+E EV ERA 
Sbjct: 5   ERTKHTCLRLEIS------GADPIFVKGTWYHSRFDISVTDGSSSWICNATEEEVAERAA 58

Query: 199 QWDQPVSEYIETAERYLGFRQPGSIYSFVDAGNGYKRLSWTFEKQGTKLEWRWKCKPSPN 378
           QWDQPVSEY+E AE+YLGF+QP SIY F DA  G KRLSWTFEK+GTKLEWRWKCKPS +
Sbjct: 59  QWDQPVSEYLELAEQYLGFQQPDSIYGFSDALEGCKRLSWTFEKEGTKLEWRWKCKPSHD 118

Query: 379 NK 384
           +K
Sbjct: 119 SK 120


>dbj|BAD43030.1| putative double strand break repair protein (XRCC4) [Arabidopsis
           thaliana] gi|56461768|gb|AAV91340.1| At1g61410
           [Arabidopsis thaliana] gi|61656135|gb|AAX49370.1|
           At1g61410 [Arabidopsis thaliana]
          Length = 248

 Score =  173 bits (438), Expect = 3e-41
 Identities = 78/122 (63%), Positives = 96/122 (78%)
 Frame = +1

Query: 19  DSTRHTCLRLEITERAENENPEVIFIKATWFDSHFDLSITSGLDAWICNASEAEVRERAN 198
           + T+HTCLRLEI+        + IF+K TW +S FD+S+T G  +WICNA+E EV ERA 
Sbjct: 5   EKTKHTCLRLEIS------GADPIFVKGTWHNSRFDISVTDGSSSWICNATEEEVAERAA 58

Query: 199 QWDQPVSEYIETAERYLGFRQPGSIYSFVDAGNGYKRLSWTFEKQGTKLEWRWKCKPSPN 378
           QWDQPVSEY++ AE+YLGF+QP S+YSF DA  G KRLSWTFEK+GTKLEWRWKCKPS +
Sbjct: 59  QWDQPVSEYLKLAEQYLGFQQPNSVYSFSDALEGSKRLSWTFEKEGTKLEWRWKCKPSDD 118

Query: 379 NK 384
           +K
Sbjct: 119 SK 120


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