BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Akebia27_contig00004897
         (559 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004287907.1| PREDICTED: U1 small nuclear ribonucleoprotei...    70   4e-10
ref|XP_004232394.1| PREDICTED: U1 small nuclear ribonucleoprotei...    68   1e-09
ref|XP_004232393.1| PREDICTED: U1 small nuclear ribonucleoprotei...    68   1e-09
ref|XP_002270129.1| PREDICTED: U1 small nuclear ribonucleoprotei...    65   2e-08
ref|XP_006340603.1| PREDICTED: U1 small nuclear ribonucleoprotei...    64   3e-08
ref|XP_006340602.1| PREDICTED: U1 small nuclear ribonucleoprotei...    64   3e-08
ref|XP_004509249.1| PREDICTED: U1 small nuclear ribonucleoprotei...    62   8e-08
ref|XP_003629470.1| U1 small nuclear ribonucleoprotein 70 kDa [M...    60   4e-07
ref|XP_003629469.1| U1 small nuclear ribonucleoprotein 70 kDa [M...    60   4e-07
ref|XP_007046969.1| U1 small nuclear ribonucleoprotein 70 kDa [T...    59   8e-07
gb|AEI98631.1| hypothetical protein 111O18.18 [Coffea canephora]       56   5e-06
dbj|BAE71300.1| putative U1 snRNP 70K protein [Trifolium pratense]     56   7e-06

>ref|XP_004287907.1| PREDICTED: U1 small nuclear ribonucleoprotein 70 kDa-like [Fragaria
           vesca subsp. vesca]
          Length = 509

 Score = 70.1 bits (170), Expect = 4e-10
 Identities = 38/85 (44%), Positives = 49/85 (57%), Gaps = 11/85 (12%)
 Frame = -3

Query: 224 RGCSRDKELDYDHAESRHGRDRHVERDRDYD----------LVEPEHGHGYEIPETDYKH 75
           RG SRDKE D+DH ES+H RDRH ER+RDYD            +PEHGH +  P+ D +H
Sbjct: 378 RGRSRDKESDFDHVESKHERDRHGERERDYDPAAPEDDQAWFEQPEHGHRHSDPDHDPEH 437

Query: 74  NIDQGLYDHLEPQGGDH-NSEMDHD 3
                 Y+    +  DH ++E DHD
Sbjct: 438 ------YERRRSKYDDHLDTEHDHD 456


>ref|XP_004232394.1| PREDICTED: U1 small nuclear ribonucleoprotein 70 kDa-like isoform 2
           [Solanum lycopersicum]
          Length = 390

 Score = 68.2 bits (165), Expect = 1e-09
 Identities = 31/66 (46%), Positives = 45/66 (68%)
 Frame = -3

Query: 224 RGCSRDKELDYDHAESRHGRDRHVERDRDYDLVEPEHGHGYEIPETDYKHNIDQGLYDHL 45
           RG SRD+E DY+H +S+H RDRH +++R+YD  EPE  HG+      Y H+  +G Y++ 
Sbjct: 278 RGRSRDREYDYEHVDSKHERDRHGDKERNYDPAEPEDDHGH---YDYYDHHQGRGDYENP 334

Query: 44  EPQGGD 27
           + QGGD
Sbjct: 335 DAQGGD 340


>ref|XP_004232393.1| PREDICTED: U1 small nuclear ribonucleoprotein 70 kDa-like isoform 1
           [Solanum lycopersicum]
          Length = 482

 Score = 68.2 bits (165), Expect = 1e-09
 Identities = 31/66 (46%), Positives = 45/66 (68%)
 Frame = -3

Query: 224 RGCSRDKELDYDHAESRHGRDRHVERDRDYDLVEPEHGHGYEIPETDYKHNIDQGLYDHL 45
           RG SRD+E DY+H +S+H RDRH +++R+YD  EPE  HG+      Y H+  +G Y++ 
Sbjct: 370 RGRSRDREYDYEHVDSKHERDRHGDKERNYDPAEPEDDHGH---YDYYDHHQGRGDYENP 426

Query: 44  EPQGGD 27
           + QGGD
Sbjct: 427 DAQGGD 432


>ref|XP_002270129.1| PREDICTED: U1 small nuclear ribonucleoprotein 70 kDa-like [Vitis
           vinifera]
          Length = 514

 Score = 64.7 bits (156), Expect = 2e-08
 Identities = 43/93 (46%), Positives = 50/93 (53%), Gaps = 19/93 (20%)
 Frame = -3

Query: 224 RGCSRDKELDYDHAESRHGRDRHVERDRDYDLVEPEHGHG-YEIPE------------TD 84
           RG SRDKE  YDH ES+H R+RH ERDRD +   PE  HG YE PE              
Sbjct: 378 RGRSRDKEY-YDHMESKHERERHGERDRDLEHAGPEDDHGWYEQPEHGHRRPEAEHDDEH 436

Query: 83  YKHNIDQ--GLYDHLEPQGG----DHNSEMDHD 3
           YKH   Q  G YDHL+ QG     D +++ D D
Sbjct: 437 YKHYDHQARGQYDHLDAQGDHDLYDRHADNDRD 469


>ref|XP_006340603.1| PREDICTED: U1 small nuclear ribonucleoprotein 70 kDa-like isoform
           X2 [Solanum tuberosum]
          Length = 474

 Score = 63.5 bits (153), Expect = 3e-08
 Identities = 29/63 (46%), Positives = 42/63 (66%)
 Frame = -3

Query: 215 SRDKELDYDHAESRHGRDRHVERDRDYDLVEPEHGHGYEIPETDYKHNIDQGLYDHLEPQ 36
           SRD+E DY+H ES+H R RH +++R+YD  EPE  HG+      Y H+  +G Y++ + Q
Sbjct: 365 SRDREYDYEHVESKHERGRHGDKERNYDPAEPEDDHGH---YDYYDHHQGRGDYENPDAQ 421

Query: 35  GGD 27
           GGD
Sbjct: 422 GGD 424


>ref|XP_006340602.1| PREDICTED: U1 small nuclear ribonucleoprotein 70 kDa-like isoform
           X1 [Solanum tuberosum]
          Length = 475

 Score = 63.5 bits (153), Expect = 3e-08
 Identities = 29/63 (46%), Positives = 42/63 (66%)
 Frame = -3

Query: 215 SRDKELDYDHAESRHGRDRHVERDRDYDLVEPEHGHGYEIPETDYKHNIDQGLYDHLEPQ 36
           SRD+E DY+H ES+H R RH +++R+YD  EPE  HG+      Y H+  +G Y++ + Q
Sbjct: 366 SRDREYDYEHVESKHERGRHGDKERNYDPAEPEDDHGH---YDYYDHHQGRGDYENPDAQ 422

Query: 35  GGD 27
           GGD
Sbjct: 423 GGD 425


>ref|XP_004509249.1| PREDICTED: U1 small nuclear ribonucleoprotein 70 kDa-like [Cicer
           arietinum]
          Length = 510

 Score = 62.4 bits (150), Expect = 8e-08
 Identities = 35/87 (40%), Positives = 46/87 (52%), Gaps = 13/87 (14%)
 Frame = -3

Query: 224 RGCSRDKELDYDHAESRHGRDRHVERDRDYD-------LVEPEHGHGYEIPETD------ 84
           RG S D+  DYDH ES+H ++ H ER RDY+         +P HGH +  PE D      
Sbjct: 384 RGRSHDRGTDYDHVESKHEKEPHGERGRDYEPEDQREWYNQPGHGHRHADPEQDPDHYEH 443

Query: 83  YKHNIDQGLYDHLEPQGGDHNSEMDHD 3
           Y+H   +G YD  +   GD+N   DHD
Sbjct: 444 YEHQRGRGQYDDGDDH-GDYNQYPDHD 469


>ref|XP_003629470.1| U1 small nuclear ribonucleoprotein 70 kDa [Medicago truncatula]
           gi|355523492|gb|AET03946.1| U1 small nuclear
           ribonucleoprotein 70 kDa [Medicago truncatula]
          Length = 314

 Score = 60.1 bits (144), Expect = 4e-07
 Identities = 34/86 (39%), Positives = 46/86 (53%), Gaps = 13/86 (15%)
 Frame = -3

Query: 224 RGCSRDKELDYDHAESRHGRDRHVERDRDYD-------LVEPEHGHGYEIPETD------ 84
           RG S D+  DYDH ES+H ++ H E +RDY+         EP HGH +  PE D      
Sbjct: 188 RGRSHDRGADYDHVESKHEKEPHGEIERDYEPDDHHGRYKEPGHGHRHADPEHDPDHYNH 247

Query: 83  YKHNIDQGLYDHLEPQGGDHNSEMDH 6
           Y+H   +G YD  + + GD+N   DH
Sbjct: 248 YEHQRGRGQYDEGDDR-GDYNQYPDH 272


>ref|XP_003629469.1| U1 small nuclear ribonucleoprotein 70 kDa [Medicago truncatula]
           gi|355523491|gb|AET03945.1| U1 small nuclear
           ribonucleoprotein 70 kDa [Medicago truncatula]
          Length = 502

 Score = 60.1 bits (144), Expect = 4e-07
 Identities = 34/86 (39%), Positives = 46/86 (53%), Gaps = 13/86 (15%)
 Frame = -3

Query: 224 RGCSRDKELDYDHAESRHGRDRHVERDRDYD-------LVEPEHGHGYEIPETD------ 84
           RG S D+  DYDH ES+H ++ H E +RDY+         EP HGH +  PE D      
Sbjct: 376 RGRSHDRGADYDHVESKHEKEPHGEIERDYEPDDHHGRYKEPGHGHRHADPEHDPDHYNH 435

Query: 83  YKHNIDQGLYDHLEPQGGDHNSEMDH 6
           Y+H   +G YD  + + GD+N   DH
Sbjct: 436 YEHQRGRGQYDEGDDR-GDYNQYPDH 460


>ref|XP_007046969.1| U1 small nuclear ribonucleoprotein 70 kDa [Theobroma cacao]
           gi|508699230|gb|EOX91126.1| U1 small nuclear
           ribonucleoprotein 70 kDa [Theobroma cacao]
          Length = 468

 Score = 58.9 bits (141), Expect = 8e-07
 Identities = 36/88 (40%), Positives = 48/88 (54%), Gaps = 14/88 (15%)
 Frame = -3

Query: 224 RGCSRDKELDYDHAESRHGRDRHVERDRDYDLVE------PEHGHGYEIPETD------Y 81
           RG SRD+E DYD  ES+H RDRH ERD D+   +       EH HG+   + D      Y
Sbjct: 369 RGRSRDRESDYDRVESKHDRDRHSERDYDHGEQDEDRGWYEEHEHGHRRSDLDDQHYEHY 428

Query: 80  KHNIDQGLYDHLEPQGGD--HNSEMDHD 3
           +H+  +G YD L+  GG   ++   DHD
Sbjct: 429 QHHRGRGEYD-LDAHGGHDRYDQYADHD 455


>gb|AEI98631.1| hypothetical protein 111O18.18 [Coffea canephora]
          Length = 532

 Score = 56.2 bits (134), Expect = 5e-06
 Identities = 35/93 (37%), Positives = 47/93 (50%), Gaps = 19/93 (20%)
 Frame = -3

Query: 224 RGCSRDKELDYDHAESRHGRDRHVERDRDYDLVEPEHGHGY--------EIPETD----- 84
           RG S D+E DYD  E++H R+RH ER+R+YD  E E   G+        + PE +     
Sbjct: 399 RGGSHDREYDYDKVEAKHDRERHGERERNYDHAEQEDDRGWYEQSDRGRKRPEGEHDHGH 458

Query: 83  ---YKHNIDQGLYDHLEPQGGD---HNSEMDHD 3
              Y H   QG YD+   QG D    +S+  HD
Sbjct: 459 YDYYDHYQGQGQYDNQGAQGDDDRYQDSDRYHD 491


>dbj|BAE71300.1| putative U1 snRNP 70K protein [Trifolium pratense]
          Length = 506

 Score = 55.8 bits (133), Expect = 7e-06
 Identities = 32/87 (36%), Positives = 45/87 (51%), Gaps = 13/87 (14%)
 Frame = -3

Query: 224 RGCSRDKELDYDHAESRHGRDRHVERDRDYD-------LVEPEHGHGYEIPETD------ 84
           RG S D+  DYDH ES+H ++ H E++RDY+         +P HG  +   E D      
Sbjct: 380 RGRSHDRVADYDHVESKHEKEPHGEKERDYEPDDHRGRYNQPGHGKRHADTEHDPDRYDH 439

Query: 83  YKHNIDQGLYDHLEPQGGDHNSEMDHD 3
           Y+H   +G YD  +   GD+N   DHD
Sbjct: 440 YEHQRGRGQYDEGDDH-GDYNQYPDHD 465