BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Akebia27_contig00004721
         (2557 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002279505.2| PREDICTED: chloroplastic group IIA intron sp...   942   0.0  
emb|CBI27903.3| unnamed protein product [Vitis vinifera]              924   0.0  
ref|XP_007203795.1| hypothetical protein PRUPE_ppa001111mg [Prun...   894   0.0  
ref|XP_007012812.1| CRS1 / YhbY domain-containing protein, putat...   850   0.0  
gb|EXB38853.1| Chloroplastic group IIA intron splicing facilitat...   841   0.0  
ref|XP_007012816.1| CRS1 / YhbY domain-containing protein, putat...   838   0.0  
ref|XP_007012815.1| CRS1 / YhbY domain-containing protein, putat...   838   0.0  
ref|XP_004144114.1| PREDICTED: chloroplastic group IIA intron sp...   830   0.0  
ref|XP_002514120.1| conserved hypothetical protein [Ricinus comm...   823   0.0  
ref|XP_006475466.1| PREDICTED: chloroplastic group IIA intron sp...   818   0.0  
ref|XP_006451488.1| hypothetical protein CICLE_v10007477mg [Citr...   818   0.0  
ref|XP_002309217.2| hypothetical protein POPTR_0006s15340g [Popu...   815   0.0  
ref|XP_004171699.1| PREDICTED: chloroplastic group IIA intron sp...   815   0.0  
ref|XP_006475470.1| PREDICTED: chloroplastic group IIA intron sp...   813   0.0  
gb|EYU29891.1| hypothetical protein MIMGU_mgv1a001353mg [Mimulus...   800   0.0  
ref|XP_006357699.1| PREDICTED: chloroplastic group IIA intron sp...   798   0.0  
ref|XP_004243753.1| PREDICTED: chloroplastic group IIA intron sp...   795   0.0  
ref|XP_004288953.1| PREDICTED: chloroplastic group IIA intron sp...   794   0.0  
ref|XP_003550629.1| PREDICTED: chloroplastic group IIA intron sp...   785   0.0  
ref|XP_004507937.1| PREDICTED: chloroplastic group IIA intron sp...   762   0.0  

>ref|XP_002279505.2| PREDICTED: chloroplastic group IIA intron splicing facilitator CRS1,
            chloroplastic-like [Vitis vinifera]
          Length = 884

 Score =  942 bits (2435), Expect = 0.0
 Identities = 497/855 (58%), Positives = 607/855 (70%), Gaps = 9/855 (1%)
 Frame = +2

Query: 20   LVFQTRENYPNSFRTLKLKTYCSCQTIEVENEEPQRTXXXXXXXXXXXXXXXSFHDIVRD 199
            L+ Q + +Y N+FRTLK    CS  +I+V+    Q+                SF + +RD
Sbjct: 14   LLLQPQAHYSNTFRTLKFNCSCSYHSIQVDT---QQVKVPLKTTKAKRKPRPSFFEQIRD 70

Query: 200  KWSLKIGSQRLKFPWXXXXXXXXXXXXXXXXXHY---SQIPNSSKENMRNRVISPPWIHG 370
            KWSLKI S R KFPW                      S + +       +R +S P IH 
Sbjct: 71   KWSLKINSPREKFPWQEQAEETQNSSGVVVPDSEVIDSSVGSPVSSASESRFVSVPCIHE 130

Query: 371  SKPRKTHFDSEIETAQNSCFEGEN---FGELSEKLEDLKRVADSNGKSEEEQEFEGFSAS 541
            SKPR     SE E +QNSC +G N   FG     +++  +       S+ + E EG    
Sbjct: 131  SKPRNPRLVSEPEISQNSCEQGVNVVGFGSHRASVDEWSKSFQKEVDSDGKFEGEGVEVD 190

Query: 542  S-PIEFVGEKEMNFDVN--GISLDEKHTGLVEHFVNSSGLRSKGVSIPLPWERNRDLELE 712
              PI  +G ++   ++    +SL+EK  G  E F N  G       I LPW+R   L+  
Sbjct: 191  EIPIGVLGTEKTEIEMGDANVSLNEKPPGGDEDFGNFEGFSGNSSLIELPWKRREGLQ-- 248

Query: 713  SVNREKWRRSNTELAEKTIPEPELRRLRNVALRMKERIKVGSLGITQALVDRIHEKWKED 892
             V R+ W R NT +AE+ +PE ELRRL+N+ALRM ERIKVG+ G+TQ+LVD IHEKW++D
Sbjct: 249  PVERDGWGRRNTRMAERMVPEHELRRLKNIALRMLERIKVGAAGVTQSLVDAIHEKWRKD 308

Query: 893  EVVKMKFEGPPVLNMKRTHEVLESKTGGLVIWRSGSTIVLYRGIAYKLPCVQTYTNQSRA 1072
            EVVK+KFEGP   NMKRTHE+LE++TGGLVIWR+GS++VLYRG+AYKL CVQ+Y  Q R 
Sbjct: 309  EVVKLKFEGPSSCNMKRTHEILETRTGGLVIWRTGSSVVLYRGMAYKLHCVQSYIKQERD 368

Query: 1073 NPNATHHLKDPTIDAVENVQQTDSVRTTESSGTGSVKLSNGPSDEQLMDISDHNHLLDEL 1252
            N N + + +D     ++++   D V+TTES  + S +     S+E+LMD+S+ NHLLDEL
Sbjct: 369  NVNISEYSQDAANVIIQDIGVKDIVKTTESVISDSARYLKDLSEEELMDLSELNHLLDEL 428

Query: 1253 GPRFKDWSGCNPQPVDADLLPCVIPGYTPPFRLLPFGIRHCLGNKQMTSYRRLARTMPPH 1432
            GPRFKDWSG  P PVDADLLP V+  Y PPFRLLP+G+RHCL N++MT  RRLARTMPPH
Sbjct: 429  GPRFKDWSGREPLPVDADLLPSVVHEYKPPFRLLPYGMRHCLRNREMTFIRRLARTMPPH 488

Query: 1433 FALGRNRELQGLAMAMVKLWERSAIAKIAIKRGVLNTCNERMAEEIKKLTGGTLVSRNKD 1612
            FALGR+RELQGLAMAMVKLWERSAIAKIAIKRGV NTCN+RMAEE+K LTGGTLVSRNKD
Sbjct: 489  FALGRSRELQGLAMAMVKLWERSAIAKIAIKRGVQNTCNDRMAEELKNLTGGTLVSRNKD 548

Query: 1613 YIVFYRGNDFLPPLVTNVLVERQKLADLRQDEEEQARQRASALAVSNVKAAIGPLVAGTL 1792
            YIVFYRGNDFLPP V   L ER+KL DL+QDEEEQAR RASAL  S  ++A GPLVAGTL
Sbjct: 549  YIVFYRGNDFLPPHVMEALKERRKLRDLQQDEEEQARHRASALIDSKARSAKGPLVAGTL 608

Query: 1793 AETMAANSRWGNQPSGEDIEKMKRDLALSKHASLVRYLEKKLTHAQEKVKKAERALGKVQ 1972
            AET+AA SRWG++PS ED+ KM RD AL++HASLVRY+ KKL HA+ K+KK E+AL KVQ
Sbjct: 609  AETLAATSRWGSEPSEEDVGKMIRDSALARHASLVRYVGKKLAHAKAKLKKTEKALRKVQ 668

Query: 1973 ESLNPTELPTDLETITDEERFLFRKIGLSMKPFLVLGRRGVFGGTVENMHLHWKYRELVK 2152
            E L P ELP DLET++DEERFLFRKIGLSMKPFL+LG RG+F GTVENMHLHWKYRELVK
Sbjct: 669  EDLEPAELPMDLETLSDEERFLFRKIGLSMKPFLLLGTRGIFDGTVENMHLHWKYRELVK 728

Query: 2153 IFVKGKSFPQVKHIAISLEAESGGLLVSLDKTTKGYAIIIYRGKNYQRPQAIRPKNLLTR 2332
            I VKGK+F QVKHIAISLEAESGG+LVS+D+T KGYAII+YRGKNYQRP A+RPKNLLT+
Sbjct: 729  IIVKGKNFAQVKHIAISLEAESGGVLVSVDRTPKGYAIIVYRGKNYQRPHALRPKNLLTK 788

Query: 2333 RQALARSIELQRREALKHHISDLQDRIELLKSELDQIEIVKETGNEKLYSRLNDAYNSXX 2512
            RQALARSIELQR EALKHHISDL++RI+LLKS  ++++      ++  YSRL+  Y++  
Sbjct: 789  RQALARSIELQRHEALKHHISDLEERIKLLKSLPEEMKTGNGIDDKAFYSRLDGTYSTDE 848

Query: 2513 XXXXXXXXXAYLGTY 2557
                     AYL  Y
Sbjct: 849  DMEEDEGEEAYLEIY 863


>emb|CBI27903.3| unnamed protein product [Vitis vinifera]
          Length = 881

 Score =  924 bits (2388), Expect = 0.0
 Identities = 493/849 (58%), Positives = 593/849 (69%), Gaps = 3/849 (0%)
 Frame = +2

Query: 20   LVFQTRENYPNSFRTLKLKTYCSCQTIEVENEEPQRTXXXXXXXXXXXXXXXSFHDIVRD 199
            L+ Q + +Y N+FRTLK    CS  +I+V+    Q+                SF + +RD
Sbjct: 56   LLLQPQAHYSNTFRTLKFNCSCSYHSIQVDT---QQVKVPLKTTKAKRKPRPSFFEQIRD 112

Query: 200  KWSLKIGSQRLKFPWXXXXXXXXXXXXXXXXXHY---SQIPNSSKENMRNRVISPPWIHG 370
            KWSLKI S R KFPW                      S + +       +R +S P IH 
Sbjct: 113  KWSLKINSPREKFPWQEQAEETQNSSGVVVPDSEVIDSSVGSPVSSASESRFVSVPCIHE 172

Query: 371  SKPRKTHFDSEIETAQNSCFEGENFGELSEKLEDLKRVADSNGKSEEEQEFEGFSASSPI 550
            SKPR     SE E +QNSC +G N                   K+E E            
Sbjct: 173  SKPRNPRLVSEPEISQNSCEQGVNV------------------KTEIEMG---------- 204

Query: 551  EFVGEKEMNFDVNGISLDEKHTGLVEHFVNSSGLRSKGVSIPLPWERNRDLELESVNREK 730
                      D N +SL+EK  G  E F N  G       I LPW+R   L+   V R+ 
Sbjct: 205  ----------DAN-VSLNEKPPGGDEDFGNFEGFSGNSSLIELPWKRREGLQ--PVERDG 251

Query: 731  WRRSNTELAEKTIPEPELRRLRNVALRMKERIKVGSLGITQALVDRIHEKWKEDEVVKMK 910
            W R NT +AE+ +PE ELRRL+N+ALRM ERIKVG+ G+TQ+LVD IHEKW++DEVVK+K
Sbjct: 252  WGRRNTRMAERMVPEHELRRLKNIALRMLERIKVGAAGVTQSLVDAIHEKWRKDEVVKLK 311

Query: 911  FEGPPVLNMKRTHEVLESKTGGLVIWRSGSTIVLYRGIAYKLPCVQTYTNQSRANPNATH 1090
            FEGP   NMKRTHE+LE++TGGLVIWR+GS++VLYRG+AYKL CVQ+Y  Q R N N + 
Sbjct: 312  FEGPSSCNMKRTHEILETRTGGLVIWRTGSSVVLYRGMAYKLHCVQSYIKQERDNVNISE 371

Query: 1091 HLKDPTIDAVENVQQTDSVRTTESSGTGSVKLSNGPSDEQLMDISDHNHLLDELGPRFKD 1270
            + +D     ++++   D V+TTES  + S +     S+E+LMD+S+ NHLLDELGPRFKD
Sbjct: 372  YSQDAANVIIQDIGVKDIVKTTESVISDSARYLKDLSEEELMDLSELNHLLDELGPRFKD 431

Query: 1271 WSGCNPQPVDADLLPCVIPGYTPPFRLLPFGIRHCLGNKQMTSYRRLARTMPPHFALGRN 1450
            WSG  P PVDADLLP V+  Y PPFRLLP+G+RHCL N++MT  RRLARTMPPHFALGR+
Sbjct: 432  WSGREPLPVDADLLPSVVHEYKPPFRLLPYGMRHCLRNREMTFIRRLARTMPPHFALGRS 491

Query: 1451 RELQGLAMAMVKLWERSAIAKIAIKRGVLNTCNERMAEEIKKLTGGTLVSRNKDYIVFYR 1630
            RELQGLAMAMVKLWERSAIAKIAIKRGV NTCN+RMAEE+K LTGGTLVSRNKDYIVFYR
Sbjct: 492  RELQGLAMAMVKLWERSAIAKIAIKRGVQNTCNDRMAEELKNLTGGTLVSRNKDYIVFYR 551

Query: 1631 GNDFLPPLVTNVLVERQKLADLRQDEEEQARQRASALAVSNVKAAIGPLVAGTLAETMAA 1810
            GNDFLPP V   L ER+KL DL+QDEEEQAR RASAL  S  ++A GPLVAGTLAET+AA
Sbjct: 552  GNDFLPPHVMEALKERRKLRDLQQDEEEQARHRASALIDSKARSAKGPLVAGTLAETLAA 611

Query: 1811 NSRWGNQPSGEDIEKMKRDLALSKHASLVRYLEKKLTHAQEKVKKAERALGKVQESLNPT 1990
             SRWG++PS ED+ KM RD AL++HASLVRY+ KKL HA+ K+KK E+AL KVQE L P 
Sbjct: 612  TSRWGSEPSEEDVGKMIRDSALARHASLVRYVGKKLAHAKAKLKKTEKALRKVQEDLEPA 671

Query: 1991 ELPTDLETITDEERFLFRKIGLSMKPFLVLGRRGVFGGTVENMHLHWKYRELVKIFVKGK 2170
            ELP DLET++DEERFLFRKIGLSMKPFL+LG RG+F GTVENMHLHWKYRELVKI VKGK
Sbjct: 672  ELPMDLETLSDEERFLFRKIGLSMKPFLLLGTRGIFDGTVENMHLHWKYRELVKIIVKGK 731

Query: 2171 SFPQVKHIAISLEAESGGLLVSLDKTTKGYAIIIYRGKNYQRPQAIRPKNLLTRRQALAR 2350
            +F QVKHIAISLEAESGG+LVS+D+T KGYAII+YRGKNYQRP A+RPKNLLT+RQALAR
Sbjct: 732  NFAQVKHIAISLEAESGGVLVSVDRTPKGYAIIVYRGKNYQRPHALRPKNLLTKRQALAR 791

Query: 2351 SIELQRREALKHHISDLQDRIELLKSELDQIEIVKETGNEKLYSRLNDAYNSXXXXXXXX 2530
            SIELQR EALKHHISDL++RI+LLKS  ++++      ++  YSRL+  Y++        
Sbjct: 792  SIELQRHEALKHHISDLEERIKLLKSLPEEMKTGNGIDDKAFYSRLDGTYSTDEDMEEDE 851

Query: 2531 XXXAYLGTY 2557
               AYL  Y
Sbjct: 852  GEEAYLEIY 860


>ref|XP_007203795.1| hypothetical protein PRUPE_ppa001111mg [Prunus persica]
            gi|462399326|gb|EMJ04994.1| hypothetical protein
            PRUPE_ppa001111mg [Prunus persica]
          Length = 906

 Score =  894 bits (2311), Expect = 0.0
 Identities = 484/841 (57%), Positives = 597/841 (70%), Gaps = 27/841 (3%)
 Frame = +2

Query: 2    SSSSSF-----LVFQTRENYPNSFRTLK-LKTYCSCQTIEVENEE-PQRTXXXXXXXXXX 160
            SS+ SF     L F    +  +SF++ + L+   SC+T++V+ +E PQR           
Sbjct: 15   SSTCSFHAPHPLCFLLLHHQTHSFKSCRALRFRVSCKTVQVDTQEQPQRIKVAFEATRKK 74

Query: 161  XXXXXSFHDIVRDKWSLKIGSQRLKFPWXXXXXXXXXXXXXXXXXHYSQIPNSSKEN--M 334
                 SF + ++DKWS+K+ S R KFPW                    + P + K +  +
Sbjct: 75   RKPKPSFFEQIQDKWSMKVNSPRDKFPWQKQNELVQEEKEEVEEEDEEEEPVNQKVSFSL 134

Query: 335  RNRVISPPWIHGSKPRKTHFDSEIETAQNSCFEGENFGELSEKLE------------DLK 478
             NR++  PW HGSK      DSE ET+Q+S  +G+N    +   E              +
Sbjct: 135  PNRIVYAPWAHGSKRITPQVDSEPETSQHSGAQGKNLDGFAGHSEIDTTSGAVKNEKSFE 194

Query: 479  RVADSNGKSEEEQEFEGFSASSPIEFVGEKEMNFDVNGISLDEKHTG------LVEHFVN 640
            R  DSN K E E+  E    S  +    EK ++  +NGISL+E  +G       VE+FV 
Sbjct: 195  RRFDSNRKLERERVGEIGIISIGVSKKEEKMISKGLNGISLNETLSGDGENDEKVENFVY 254

Query: 641  SSGLRSKGVSIPLPWERNRDLELESVNREKWRRSNTELAEKTIPEPELRRLRNVALRMKE 820
            S        SI LPW+R  +L  E  ++ + RRSNTELAE+ +P+ ELRRLRNV+LRM E
Sbjct: 255  SGS-----GSIRLPWKRESELSSEEGDKTRKRRSNTELAERMLPDHELRRLRNVSLRMLE 309

Query: 821  RIKVGSLGITQALVDRIHEKWKEDEVVKMKFEGPPVLNMKRTHEVLESKTGGLVIWRSGS 1000
            RIKVG  GITQALV+ IHEKWK DEVVK+KFE P  LNMKRTHE+LESKTGGLVIWRSGS
Sbjct: 310  RIKVGVTGITQALVNTIHEKWKIDEVVKLKFEEPFSLNMKRTHEILESKTGGLVIWRSGS 369

Query: 1001 TIVLYRGIAYKLPCVQTYTNQSRANPNATHHLKDPTIDAVENVQQTDSVRTTESSGTGSV 1180
            ++VLYRG+ Y LPCVQTY   S+ N +   H ++ T D++ NV   D  RTT+     S 
Sbjct: 370  SVVLYRGMTYNLPCVQTYAKHSQTNSHMLQHSENATSDSMHNVGVKDVSRTTDFPSLESA 429

Query: 1181 KLSNGPSDEQLMDISDHNHLLDELGPRFKDWSGCNPQPVDADLLPCVIPGYTPPFRLLPF 1360
            +     S  +LM ++D NHLLDELGPRFKDW G  P PVDADLLP V+ GY  PFRLLP+
Sbjct: 430  EYLKDLSQRELMALNDLNHLLDELGPRFKDWIGREPLPVDADLLPSVVRGYKTPFRLLPY 489

Query: 1361 GIRHCLGNKQMTSYRRLARTMPPHFALGRNRELQGLAMAMVKLWERSAIAKIAIKRGVLN 1540
            G R CL +K MT YRRLART+PPHFALG NRELQGLA AM+KLWE+SAIAKIAIKRGV N
Sbjct: 490  GFRPCLRDKDMTKYRRLARTVPPHFALGMNRELQGLANAMMKLWEKSAIAKIAIKRGVQN 549

Query: 1541 TCNERMAEEIKKLTGGTLVSRNKDYIVFYRGNDFLPPLVTNVLVERQKLADLRQDEEEQA 1720
            TCNERMAEE+K+LTGGTL+SRNKD+IVFYRGND+LP +VT VL ER+KL DL+QDEEEQA
Sbjct: 550  TCNERMAEELKRLTGGTLLSRNKDFIVFYRGNDYLPSVVTGVLEERRKLRDLQQDEEEQA 609

Query: 1721 RQRASALAVSNVKAAIGPLVAGTLAETMAANSRWGNQPSGEDIEKMKRDLALSKHASLVR 1900
            RQ AS   VSN +A+ G  VAGTLAETMAA + W NQ + + +EKM+RD   ++HASLVR
Sbjct: 610  RQMASDYVVSNSEASKGQFVAGTLAETMAATTHWRNQLTIDKVEKMRRDSTFARHASLVR 669

Query: 1901 YLEKKLTHAQEKVKKAERALGKVQESLNPTELPTDLETITDEERFLFRKIGLSMKPFLVL 2080
            +LEKKL   + K++KAE+AL +VQESL P++LP DLET+TDE+RFLFRKIGLSMKPFL+L
Sbjct: 670  HLEKKLALGKGKLRKAEKALARVQESLEPSDLPDDLETLTDEDRFLFRKIGLSMKPFLLL 729

Query: 2081 GRRGVFGGTVENMHLHWKYRELVKIFVKGKSFPQVKHIAISLEAESGGLLVSLDKTTKGY 2260
            GRR V+ GT+ENMHLHWK++ELVKI V+GKSF QVKHIAISLEAESGG+LVSLDKTTKGY
Sbjct: 730  GRREVYSGTIENMHLHWKHKELVKIIVRGKSFEQVKHIAISLEAESGGVLVSLDKTTKGY 789

Query: 2261 AIIIYRGKNYQRPQAIRPKNLLTRRQALARSIELQRREALKHHISDLQDRIELLKSELDQ 2440
            AII+YRGKNYQ P  +RP+NLLTRRQALARS+ELQRREALKHHISDLQ+++ LLKSEL++
Sbjct: 790  AIILYRGKNYQCPLPLRPRNLLTRRQALARSVELQRREALKHHISDLQEKVGLLKSELEE 849

Query: 2441 I 2443
            +
Sbjct: 850  M 850


>ref|XP_007012812.1| CRS1 / YhbY domain-containing protein, putative isoform 1 [Theobroma
            cacao] gi|590575888|ref|XP_007012813.1| CRS1 / YhbY
            domain-containing protein, putative isoform 1 [Theobroma
            cacao] gi|590575892|ref|XP_007012814.1| CRS1 / YhbY
            domain-containing protein, putative isoform 1 [Theobroma
            cacao] gi|508783175|gb|EOY30431.1| CRS1 / YhbY
            domain-containing protein, putative isoform 1 [Theobroma
            cacao] gi|508783176|gb|EOY30432.1| CRS1 / YhbY
            domain-containing protein, putative isoform 1 [Theobroma
            cacao] gi|508783177|gb|EOY30433.1| CRS1 / YhbY
            domain-containing protein, putative isoform 1 [Theobroma
            cacao]
          Length = 873

 Score =  850 bits (2195), Expect = 0.0
 Identities = 488/873 (55%), Positives = 599/873 (68%), Gaps = 21/873 (2%)
 Frame = +2

Query: 2    SSSSSFLVFQTRENYPN-SFRTLKLK-TYCSCQTIEVENEEPQRTXXXXXXXXXXXXXXX 175
            S S  FL+ Q + + PN SFR LK K + CS QTI+V  E  ++                
Sbjct: 17   SRSLYFLLLQAQTHCPNNSFRALKFKPSCCSHQTIKVGVEITRKRKPKP----------- 65

Query: 176  SFHDIVRDKWSLK-IGSQRLKFPW----------XXXXXXXXXXXXXXXXXHYSQIPNSS 322
            SF D ++DKWSLK I S R KFPW                              Q+  S 
Sbjct: 66   SFLDQIKDKWSLKPIISTREKFPWQEKEEFEEEEVERKQSFGGAISESERDEDPQVEGSD 125

Query: 323  --KENMRNRVISPPWIHGSKPRKTHFDSEIETAQNSCFEGENFGELSEKLEDLKRVADSN 496
                +  +RVIS PW HGS+  + HFD   E +        NF     K+ED       +
Sbjct: 126  PVSSSFPSRVISAPWSHGSEFNEPHFDFVPEIS--------NF---ESKIED-------S 167

Query: 497  GKSEEEQEFEGFSASSPIEFVGEKEMNFDVNGISLDEKHTGLV--EHFVNSSGLRSKGVS 670
              SE+  EF G + +  +  + +K  + +   ++++++  GL   +      GL     S
Sbjct: 168  FASEKTIEFPGGNKAEVVGGLIDKSESLN-EEVNINKQKIGLPVGKEVAAVEGLNDVVSS 226

Query: 671  IPLPWERNRDLELESVNREKWR---RSNTELAEKTIPEPELRRLRNVALRMKERIKVGSL 841
                   N D E  SV  +  R   RSNTE+ ++ IPE E +RLRNVALRM ER KVG  
Sbjct: 227  RENFEVSNSDDEGGSVEGDSGRSKKRSNTEMVDRMIPEHESQRLRNVALRMVERTKVGVA 286

Query: 842  GITQALVDRIHEKWKEDEVVKMKFEGPPVLNMKRTHEVLESKTGGLVIWRSGSTIVLYRG 1021
            GITQALV+ IHE+WK DEVVK+KFE P  LNMKRTHE+LE +TGGLVIWRSGS++VLYRG
Sbjct: 287  GITQALVEYIHERWKMDEVVKLKFEEPLSLNMKRTHEILEQRTGGLVIWRSGSSLVLYRG 346

Query: 1022 IAYKLPCVQTYTNQSRANPNATHHLKDPTIDAVENVQQTDSVRTTESSGTGSVKLSNGPS 1201
            +AYKL CVQ+YT+Q++ + NA     +   D  +N+   +SVRT E     S +     S
Sbjct: 347  MAYKLHCVQSYTSQNKVDMNALDCSTNVESDTTQNIVVKESVRTMECFMPSSSEYLKDLS 406

Query: 1202 DEQLMDISDHNHLLDELGPRFKDWSGCNPQPVDADLLPCVIPGYTPPFRLLPFGIRHCLG 1381
             E+LMD+ + NHLLDELGPR+KDWSG  P PVDADLLP V+PGY PPFR LP+GIRHCL 
Sbjct: 407  KEELMDLCELNHLLDELGPRYKDWSGREPLPVDADLLPPVVPGYQPPFRRLPYGIRHCLK 466

Query: 1382 NKQMTSYRRLARTMPPHFALGRNRELQGLAMAMVKLWERSAIAKIAIKRGVLNTCNERMA 1561
            + +MT++RRLART+PPHFALGRNRELQGLA A+VKLWE SAIAKIAIKRGV NT NERMA
Sbjct: 467  DHEMTTFRRLARTVPPHFALGRNRELQGLAEAIVKLWESSAIAKIAIKRGVQNTRNERMA 526

Query: 1562 EEIKKLTGGTLVSRNKDYIVFYRGNDFLPPLVTNVLVERQKLADLRQDEEEQARQRASAL 1741
            EE+K+LTGGTL+SRNK++IVFYRGNDFLPP+VT  L ERQK  +L+Q+EEE+AR+R  AL
Sbjct: 527  EELKQLTGGTLLSRNKEFIVFYRGNDFLPPVVTKTLKERQKSRNLQQEEEEKARERVLAL 586

Query: 1742 AVSNVKAAIGPLVAGTLAETMAANSRWGNQPSGEDIEKMKRDLALSKHASLVRYLEKKLT 1921
              SN KA+  PLVAGTLAET AA SRWG+QPS E++E+MK++ AL++ ASLVRYLEKKL 
Sbjct: 587  VGSNAKASKLPLVAGTLAETTAATSRWGHQPSIEEVEEMKKNSALTQQASLVRYLEKKLA 646

Query: 1922 HAQEKVKKAERALGKVQESLNPTELPTDLETITDEERFLFRKIGLSMKPFLVLGRRGVFG 2101
             A  K++KA +AL KVQ+ L P +LPTDLET++DEER LFRKIGLSMKP+L+LGRRGV+ 
Sbjct: 647  LAIGKLRKANKALAKVQKHLEPADLPTDLETLSDEERILFRKIGLSMKPYLLLGRRGVYD 706

Query: 2102 GTVENMHLHWKYRELVKIFVKGKSFPQVKHIAISLEAESGGLLVSLDKTTKGYAIIIYRG 2281
            GT+ENMHLHWKYRELVKI VKG++F QVKHIAISLEAESGGLLVSLDKTTKGYAIIIYRG
Sbjct: 707  GTIENMHLHWKYRELVKIIVKGENFAQVKHIAISLEAESGGLLVSLDKTTKGYAIIIYRG 766

Query: 2282 KNYQRPQAIRPKNLLTRRQALARSIELQRREALKHHISDLQDRIELLKSELDQIEIVKET 2461
            KNY RP  +RPKNLLTRRQALARS+ELQRREALKHH+ DLQ++IEL+KSEL++++  KE 
Sbjct: 767  KNYMRPCVLRPKNLLTRRQALARSVELQRREALKHHVLDLQEKIELMKSELEEMKTGKEI 826

Query: 2462 GNEKL-YSRLNDAYNSXXXXXXXXXXXAYLGTY 2557
              +K  YSRLN A               YL TY
Sbjct: 827  DVDKTSYSRLNKAPLFDEDIEEGEWEEEYLETY 859


>gb|EXB38853.1| Chloroplastic group IIA intron splicing facilitator CRS1 [Morus
            notabilis]
          Length = 859

 Score =  841 bits (2172), Expect = 0.0
 Identities = 462/838 (55%), Positives = 577/838 (68%), Gaps = 15/838 (1%)
 Frame = +2

Query: 2    SSSSS----FLVFQTRENYPNSFRTLKLKTYCSCQTIEVENEE-PQRTXXXXXXXXXXXX 166
            SSSSS    FL+ Q + ++  + + LK +   S + ++V +E+ PQR             
Sbjct: 15   SSSSSHSLHFLLLQRQTHFSKTSKPLKFRISSSQRVVQVASEQQPQRVKLALETTKQTKK 74

Query: 167  XXX---SFHDIVRDKWSLKIGSQRLKFPWXXXXXXXXXXXXXXXXXHYSQIP--NSSKEN 331
                  SF + +++KWS KIGS R KFPW                   ++I    S+ ++
Sbjct: 75   KRKPKPSFFEQIQEKWSAKIGSTREKFPWQEESSQDEQEGDNEEEERETEIDVKESASDS 134

Query: 332  M----RNRVISPPWIHGSKPRKTHFDSEIETAQNSCFEGENFGELSEKLEDLKRVADSNG 499
            +    +N V+S PW HG+KP K H  SE ET + S     + G+   + +        + 
Sbjct: 135  VSFGGKNGVVSAPWAHGTKPFKPHVVSEPETLEKS-----DNGDFQREFD-----VGRDE 184

Query: 500  KSEEEQEFEGFSASSPIEFVGEKEMNFDVNGISLDEKHTGLVEHFVNSSGLRSKGVSIPL 679
             SEEE E                  N  +NG SLD+           SS  +S      L
Sbjct: 185  ISEEESEIS----------------NNVMNGFSLDDVE--------ESSDYKSN----DL 216

Query: 680  PWERNRDLE-LESVNREKWRRSNTELAEKTIPEPELRRLRNVALRMKERIKVGSLGITQA 856
            PW++    E  E       RRSNT +AEKT+PE EL+RLRNV+LRM ER KVG+ GITQA
Sbjct: 217  PWKKAGKAESREGEKAAAKRRSNTAMAEKTLPEHELKRLRNVSLRMLERRKVGARGITQA 276

Query: 857  LVDRIHEKWKEDEVVKMKFEGPPVLNMKRTHEVLESKTGGLVIWRSGSTIVLYRGIAYKL 1036
            LVD IHEKWK DEVVK+KFE P  LNM+RTHE+LESKTGGLVIWRSGS++VLYRG+ Y L
Sbjct: 277  LVDSIHEKWKLDEVVKLKFEEPLSLNMRRTHEILESKTGGLVIWRSGSSVVLYRGMTYNL 336

Query: 1037 PCVQTYTNQSRANPNATHHLKDPTIDAVENVQQTDSVRTTESSGTGSVKLSNGPSDEQLM 1216
             CVQ+YT +++++      L+D   D V + Q   S+RT ESS   SVK   G S+ + M
Sbjct: 337  LCVQSYTKENQSDSMKLPALEDGKSDIVHDKQVKVSIRTMESSTPISVKKVKGLSEGETM 396

Query: 1217 DISDHNHLLDELGPRFKDWSGCNPQPVDADLLPCVIPGYTPPFRLLPFGIRHCLGNKQMT 1396
             ++D N LLDELGPRF DW G  P PVDADLLP V+P Y  PFR+LP+G++ C+GNK+MT
Sbjct: 397  QLNDLNQLLDELGPRFTDWLGREPLPVDADLLPPVVPDYRTPFRILPYGVKRCVGNKEMT 456

Query: 1397 SYRRLARTMPPHFALGRNRELQGLAMAMVKLWERSAIAKIAIKRGVLNTCNERMAEEIKK 1576
              RR AR +PPHFALGRNRELQGLA AMV+LWE+SAIAKIAIKRGV NTCNERMAEE+K+
Sbjct: 457  KLRRTARMIPPHFALGRNRELQGLAKAMVRLWEKSAIAKIAIKRGVQNTCNERMAEELKR 516

Query: 1577 LTGGTLVSRNKDYIVFYRGNDFLPPLVTNVLVERQKLADLRQDEEEQARQRASALAVSNV 1756
            LTGGTL+SRNKD+I+FYRGNDF+PP+V   L ER+KL DL+QDEEE+ RQ A A   S  
Sbjct: 517  LTGGTLLSRNKDFIIFYRGNDFMPPVVVGSLKERRKLRDLQQDEEEKVRQMAPAFIQSKS 576

Query: 1757 KAAIGPLVAGTLAETMAANSRWGNQPSGEDIEKMKRDLALSKHASLVRYLEKKLTHAQEK 1936
            +A I  LVAGTLAETMAA +RWGNQ S  D+E M +D  L++HAS++R+LE+KL  A+  
Sbjct: 577  QACINQLVAGTLAETMAATARWGNQQSPVDVEMMMKDSTLARHASIIRHLERKLALAKGN 636

Query: 1937 VKKAERALGKVQESLNPTELPTDLETITDEERFLFRKIGLSMKPFLVLGRRGVFGGTVEN 2116
            + KAE+AL KVQE+++P++LP DLETITDEERFLFRKIGLSM+PFL+LGRRG++ GT+EN
Sbjct: 637  LTKAEKALAKVQENMDPSDLPNDLETITDEERFLFRKIGLSMEPFLLLGRRGLYSGTIEN 696

Query: 2117 MHLHWKYRELVKIFVKGKSFPQVKHIAISLEAESGGLLVSLDKTTKGYAIIIYRGKNYQR 2296
            MHLHWKYRELVKI V+GKSF  VK IAISLEAESGG+LVS+DKT KGYAI++YRGKNYQ 
Sbjct: 697  MHLHWKYRELVKIIVRGKSFEHVKQIAISLEAESGGVLVSIDKTIKGYAILVYRGKNYQS 756

Query: 2297 PQAIRPKNLLTRRQALARSIELQRREALKHHISDLQDRIELLKSELDQIEIVKETGNE 2470
            P  IRP+NLLTRRQALARS+ELQRREAL+HHI++LQ+RI LLKSELD+    K   NE
Sbjct: 757  PLKIRPQNLLTRRQALARSVELQRREALQHHIAELQERIGLLKSELDESRNGKIVDNE 814


>ref|XP_007012816.1| CRS1 / YhbY domain-containing protein, putative isoform 5 [Theobroma
            cacao] gi|590575903|ref|XP_007012817.1| CRS1 / YhbY
            domain-containing protein, putative isoform 5 [Theobroma
            cacao] gi|508783179|gb|EOY30435.1| CRS1 / YhbY
            domain-containing protein, putative isoform 5 [Theobroma
            cacao] gi|508783180|gb|EOY30436.1| CRS1 / YhbY
            domain-containing protein, putative isoform 5 [Theobroma
            cacao]
          Length = 822

 Score =  838 bits (2164), Expect = 0.0
 Identities = 475/831 (57%), Positives = 581/831 (69%), Gaps = 20/831 (2%)
 Frame = +2

Query: 2    SSSSSFLVFQTRENYPN-SFRTLKLK-TYCSCQTIEVENEEPQRTXXXXXXXXXXXXXXX 175
            S S  FL+ Q + + PN SFR LK K + CS QTI+V  E  ++                
Sbjct: 17   SRSLYFLLLQAQTHCPNNSFRALKFKPSCCSHQTIKVGVEITRKRKPKP----------- 65

Query: 176  SFHDIVRDKWSLK-IGSQRLKFPW----------XXXXXXXXXXXXXXXXXHYSQIPNSS 322
            SF D ++DKWSLK I S R KFPW                              Q+  S 
Sbjct: 66   SFLDQIKDKWSLKPIISTREKFPWQEKEEFEEEEVERKQSFGGAISESERDEDPQVEGSD 125

Query: 323  --KENMRNRVISPPWIHGSKPRKTHFDSEIETAQNSCFEGENFGELSEKLEDLKRVADSN 496
                +  +RVIS PW HGS+  + HFD   E +        NF     K+ED       +
Sbjct: 126  PVSSSFPSRVISAPWSHGSEFNEPHFDFVPEIS--------NF---ESKIED-------S 167

Query: 497  GKSEEEQEFEGFSASSPIEFVGEKEMNFDVNGISLDEKHTGLV--EHFVNSSGLRSKGVS 670
              SE+  EF G + +  +  + +K  + +   ++++++  GL   +      GL     S
Sbjct: 168  FASEKTIEFPGGNKAEVVGGLIDKSESLN-EEVNINKQKIGLPVGKEVAAVEGLNDVVSS 226

Query: 671  IPLPWERNRDLELESVNREKWR---RSNTELAEKTIPEPELRRLRNVALRMKERIKVGSL 841
                   N D E  SV  +  R   RSNTE+ ++ IPE E +RLRNVALRM ER KVG  
Sbjct: 227  RENFEVSNSDDEGGSVEGDSGRSKKRSNTEMVDRMIPEHESQRLRNVALRMVERTKVGVA 286

Query: 842  GITQALVDRIHEKWKEDEVVKMKFEGPPVLNMKRTHEVLESKTGGLVIWRSGSTIVLYRG 1021
            GITQALV+ IHE+WK DEVVK+KFE P  LNMKRTHE+LE +TGGLVIWRSGS++VLYRG
Sbjct: 287  GITQALVEYIHERWKMDEVVKLKFEEPLSLNMKRTHEILEQRTGGLVIWRSGSSLVLYRG 346

Query: 1022 IAYKLPCVQTYTNQSRANPNATHHLKDPTIDAVENVQQTDSVRTTESSGTGSVKLSNGPS 1201
            +AYKL CVQ+YT+Q++ + NA     +   D  +N+   +SVRT E     S +     S
Sbjct: 347  MAYKLHCVQSYTSQNKVDMNALDCSTNVESDTTQNIVVKESVRTMECFMPSSSEYLKDLS 406

Query: 1202 DEQLMDISDHNHLLDELGPRFKDWSGCNPQPVDADLLPCVIPGYTPPFRLLPFGIRHCLG 1381
             E+LMD+ + NHLLDELGPR+KDWSG  P PVDADLLP V+PGY PPFR LP+GIRHCL 
Sbjct: 407  KEELMDLCELNHLLDELGPRYKDWSGREPLPVDADLLPPVVPGYQPPFRRLPYGIRHCLK 466

Query: 1382 NKQMTSYRRLARTMPPHFALGRNRELQGLAMAMVKLWERSAIAKIAIKRGVLNTCNERMA 1561
            + +MT++RRLART+PPHFALGRNRELQGLA A+VKLWE SAIAKIAIKRGV NT NERMA
Sbjct: 467  DHEMTTFRRLARTVPPHFALGRNRELQGLAEAIVKLWESSAIAKIAIKRGVQNTRNERMA 526

Query: 1562 EEIKKLTGGTLVSRNKDYIVFYRGNDFLPPLVTNVLVERQKLADLRQDEEEQARQRASAL 1741
            EE+K+LTGGTL+SRNK++IVFYRGNDFLPP+VT  L ERQK  +L+Q+EEE+AR+R  AL
Sbjct: 527  EELKQLTGGTLLSRNKEFIVFYRGNDFLPPVVTKTLKERQKSRNLQQEEEEKARERVLAL 586

Query: 1742 AVSNVKAAIGPLVAGTLAETMAANSRWGNQPSGEDIEKMKRDLALSKHASLVRYLEKKLT 1921
              SN KA+  PLVAGTLAET AA SRWG+QPS E++E+MK++ AL++ ASLVRYLEKKL 
Sbjct: 587  VGSNAKASKLPLVAGTLAETTAATSRWGHQPSIEEVEEMKKNSALTQQASLVRYLEKKLA 646

Query: 1922 HAQEKVKKAERALGKVQESLNPTELPTDLETITDEERFLFRKIGLSMKPFLVLGRRGVFG 2101
             A  K++KA +AL KVQ+ L P +LPTDLET++DEER LFRKIGLSMKP+L+LGRRGV+ 
Sbjct: 647  LAIGKLRKANKALAKVQKHLEPADLPTDLETLSDEERILFRKIGLSMKPYLLLGRRGVYD 706

Query: 2102 GTVENMHLHWKYRELVKIFVKGKSFPQVKHIAISLEAESGGLLVSLDKTTKGYAIIIYRG 2281
            GT+ENMHLHWKYRELVKI VKG++F QVKHIAISLEAESGGLLVSLDKTTKGYAIIIYRG
Sbjct: 707  GTIENMHLHWKYRELVKIIVKGENFAQVKHIAISLEAESGGLLVSLDKTTKGYAIIIYRG 766

Query: 2282 KNYQRPQAIRPKNLLTRRQALARSIELQRREALKHHISDLQDRIELLKSEL 2434
            KNY RP  +RPKNLLTRRQALARS+ELQRREALKHH+ DLQ++IEL+KSEL
Sbjct: 767  KNYMRPCVLRPKNLLTRRQALARSVELQRREALKHHVLDLQEKIELMKSEL 817


>ref|XP_007012815.1| CRS1 / YhbY domain-containing protein, putative isoform 4 [Theobroma
            cacao] gi|508783178|gb|EOY30434.1| CRS1 / YhbY
            domain-containing protein, putative isoform 4 [Theobroma
            cacao]
          Length = 818

 Score =  838 bits (2164), Expect = 0.0
 Identities = 475/831 (57%), Positives = 581/831 (69%), Gaps = 20/831 (2%)
 Frame = +2

Query: 2    SSSSSFLVFQTRENYPN-SFRTLKLK-TYCSCQTIEVENEEPQRTXXXXXXXXXXXXXXX 175
            S S  FL+ Q + + PN SFR LK K + CS QTI+V  E  ++                
Sbjct: 17   SRSLYFLLLQAQTHCPNNSFRALKFKPSCCSHQTIKVGVEITRKRKPKP----------- 65

Query: 176  SFHDIVRDKWSLK-IGSQRLKFPW----------XXXXXXXXXXXXXXXXXHYSQIPNSS 322
            SF D ++DKWSLK I S R KFPW                              Q+  S 
Sbjct: 66   SFLDQIKDKWSLKPIISTREKFPWQEKEEFEEEEVERKQSFGGAISESERDEDPQVEGSD 125

Query: 323  --KENMRNRVISPPWIHGSKPRKTHFDSEIETAQNSCFEGENFGELSEKLEDLKRVADSN 496
                +  +RVIS PW HGS+  + HFD   E +        NF     K+ED       +
Sbjct: 126  PVSSSFPSRVISAPWSHGSEFNEPHFDFVPEIS--------NF---ESKIED-------S 167

Query: 497  GKSEEEQEFEGFSASSPIEFVGEKEMNFDVNGISLDEKHTGLV--EHFVNSSGLRSKGVS 670
              SE+  EF G + +  +  + +K  + +   ++++++  GL   +      GL     S
Sbjct: 168  FASEKTIEFPGGNKAEVVGGLIDKSESLN-EEVNINKQKIGLPVGKEVAAVEGLNDVVSS 226

Query: 671  IPLPWERNRDLELESVNREKWR---RSNTELAEKTIPEPELRRLRNVALRMKERIKVGSL 841
                   N D E  SV  +  R   RSNTE+ ++ IPE E +RLRNVALRM ER KVG  
Sbjct: 227  RENFEVSNSDDEGGSVEGDSGRSKKRSNTEMVDRMIPEHESQRLRNVALRMVERTKVGVA 286

Query: 842  GITQALVDRIHEKWKEDEVVKMKFEGPPVLNMKRTHEVLESKTGGLVIWRSGSTIVLYRG 1021
            GITQALV+ IHE+WK DEVVK+KFE P  LNMKRTHE+LE +TGGLVIWRSGS++VLYRG
Sbjct: 287  GITQALVEYIHERWKMDEVVKLKFEEPLSLNMKRTHEILEQRTGGLVIWRSGSSLVLYRG 346

Query: 1022 IAYKLPCVQTYTNQSRANPNATHHLKDPTIDAVENVQQTDSVRTTESSGTGSVKLSNGPS 1201
            +AYKL CVQ+YT+Q++ + NA     +   D  +N+   +SVRT E     S +     S
Sbjct: 347  MAYKLHCVQSYTSQNKVDMNALDCSTNVESDTTQNIVVKESVRTMECFMPSSSEYLKDLS 406

Query: 1202 DEQLMDISDHNHLLDELGPRFKDWSGCNPQPVDADLLPCVIPGYTPPFRLLPFGIRHCLG 1381
             E+LMD+ + NHLLDELGPR+KDWSG  P PVDADLLP V+PGY PPFR LP+GIRHCL 
Sbjct: 407  KEELMDLCELNHLLDELGPRYKDWSGREPLPVDADLLPPVVPGYQPPFRRLPYGIRHCLK 466

Query: 1382 NKQMTSYRRLARTMPPHFALGRNRELQGLAMAMVKLWERSAIAKIAIKRGVLNTCNERMA 1561
            + +MT++RRLART+PPHFALGRNRELQGLA A+VKLWE SAIAKIAIKRGV NT NERMA
Sbjct: 467  DHEMTTFRRLARTVPPHFALGRNRELQGLAEAIVKLWESSAIAKIAIKRGVQNTRNERMA 526

Query: 1562 EEIKKLTGGTLVSRNKDYIVFYRGNDFLPPLVTNVLVERQKLADLRQDEEEQARQRASAL 1741
            EE+K+LTGGTL+SRNK++IVFYRGNDFLPP+VT  L ERQK  +L+Q+EEE+AR+R  AL
Sbjct: 527  EELKQLTGGTLLSRNKEFIVFYRGNDFLPPVVTKTLKERQKSRNLQQEEEEKARERVLAL 586

Query: 1742 AVSNVKAAIGPLVAGTLAETMAANSRWGNQPSGEDIEKMKRDLALSKHASLVRYLEKKLT 1921
              SN KA+  PLVAGTLAET AA SRWG+QPS E++E+MK++ AL++ ASLVRYLEKKL 
Sbjct: 587  VGSNAKASKLPLVAGTLAETTAATSRWGHQPSIEEVEEMKKNSALTQQASLVRYLEKKLA 646

Query: 1922 HAQEKVKKAERALGKVQESLNPTELPTDLETITDEERFLFRKIGLSMKPFLVLGRRGVFG 2101
             A  K++KA +AL KVQ+ L P +LPTDLET++DEER LFRKIGLSMKP+L+LGRRGV+ 
Sbjct: 647  LAIGKLRKANKALAKVQKHLEPADLPTDLETLSDEERILFRKIGLSMKPYLLLGRRGVYD 706

Query: 2102 GTVENMHLHWKYRELVKIFVKGKSFPQVKHIAISLEAESGGLLVSLDKTTKGYAIIIYRG 2281
            GT+ENMHLHWKYRELVKI VKG++F QVKHIAISLEAESGGLLVSLDKTTKGYAIIIYRG
Sbjct: 707  GTIENMHLHWKYRELVKIIVKGENFAQVKHIAISLEAESGGLLVSLDKTTKGYAIIIYRG 766

Query: 2282 KNYQRPQAIRPKNLLTRRQALARSIELQRREALKHHISDLQDRIELLKSEL 2434
            KNY RP  +RPKNLLTRRQALARS+ELQRREALKHH+ DLQ++IEL+KSEL
Sbjct: 767  KNYMRPCVLRPKNLLTRRQALARSVELQRREALKHHVLDLQEKIELMKSEL 817


>ref|XP_004144114.1| PREDICTED: chloroplastic group IIA intron splicing facilitator CRS1,
            chloroplastic-like [Cucumis sativus]
          Length = 846

 Score =  830 bits (2144), Expect = 0.0
 Identities = 459/844 (54%), Positives = 567/844 (67%), Gaps = 31/844 (3%)
 Frame = +2

Query: 2    SSSSSFLVFQTRENYPNS--FRTLKLKTYCSCQTIEVENEEPQRTXXXXXXXXXXXXXXX 175
            SSS SF         P+S  F   + K +CS  TI+VE + P+R                
Sbjct: 21   SSSLSFHFILRHSQIPSSIIFTPQRFKIHCSNNTIQVETQPPRRIRVDFEVKKKRKPRP- 79

Query: 176  SFHDIVRDKWSLKIGSQRLKFPWXXXXXXXXXXXXXXXXXHYSQ-------------IPN 316
            SF + +R KWS K  S    FPW                    +             IP 
Sbjct: 80   SFLEQIRHKWSTKPISSTHTFPWQQQEQDRHHKQDEGEGEEEEEEEEEQVANQTSVSIPE 139

Query: 317  SSKENMR----NRVISPPWIHGSKPRKTHFDSEIETAQNSCFEGENFGELSEKLEDLKRV 484
            S+ +  +     R IS PW HGS+ R T FD + +T       GE   E+S+   D    
Sbjct: 140  STTDVTQAVPITRSISAPWAHGSQSRNTQFDFKPKTPN-----GEVINEISKISTD---- 190

Query: 485  ADSNGKSEEEQEFEGFSASSPIEFVGEKEMNFDVNGISLDEKHTGLVEHFVNS-SGLRSK 661
             D++ ++      +  S  S      E E   D   + + EK + L +  V+S S     
Sbjct: 191  -DTSNRNASTISIDEISDDS-----SEDEAEIDTVVLPVTEKRSTLSKKIVHSVSSDNDD 244

Query: 662  GVSIPLPWERN--RDLELESVNREKWRRSNTELAEKTIPEPELRRLRNVALRMKERIKVG 835
               + LPW+R   RD E+++  R    RS T LAE+ +PE ELRRLRN++LRM ERI+VG
Sbjct: 245  NGRVDLPWKREPRRDSEVDAGQR----RSKTLLAEQMLPEHELRRLRNISLRMVERIEVG 300

Query: 836  SLGITQALVDRIHEKWKEDEVVKMKFEGPPVLNMKRTHEVLESKTGGLVIWRSGSTIVLY 1015
              GITQ L+D IHEKWK DEVVK+KFEGP  +NMKR HE LE++TGGLVIWRSGS IVLY
Sbjct: 301  VKGITQELLDSIHEKWKVDEVVKLKFEGPLTVNMKRAHEKLENRTGGLVIWRSGSLIVLY 360

Query: 1016 RGIAYKLPCVQTYTNQSRANPNATHHLKDPTIDAVENVQQTDSVR---------TTESSG 1168
            RG+ Y LPCVQ+Y  Q++A  N        T+D   NV+  D  R         T  +  
Sbjct: 361  RGMTYHLPCVQSYAKQNQAKSN--------TLDVPNNVESDDITRNEKLHTTVGTMSTIV 412

Query: 1169 TGSVKLSNGPSDEQLMDISDHNHLLDELGPRFKDWSGCNPQPVDADLLPCVIPGYTPPFR 1348
            +G+ K +   S ++LM++SD NHLLDE+GPRFKDWSGC P PVDADLLP ++PGY PP R
Sbjct: 413  SGASKHTKTLSKKELMELSDLNHLLDEIGPRFKDWSGCEPVPVDADLLPGIVPGYKPPTR 472

Query: 1349 LLPFGIRHCLGNKQMTSYRRLARTMPPHFALGRNRELQGLAMAMVKLWERSAIAKIAIKR 1528
            +LP+G+RHCL NK++T +RRLAR MPPHFALGRNR+LQGLA AMVKLWE+ AIAKIAIKR
Sbjct: 473  ILPYGVRHCLRNKEVTIFRRLARKMPPHFALGRNRQLQGLANAMVKLWEKCAIAKIAIKR 532

Query: 1529 GVLNTCNERMAEEIKKLTGGTLVSRNKDYIVFYRGNDFLPPLVTNVLVERQKLADLRQDE 1708
            GV NT NERMAEE++ LTGGTL+SRNK+YIVFYRGND+LPP +T  L ER+KLAD +QD 
Sbjct: 533  GVENTRNERMAEELRILTGGTLLSRNKEYIVFYRGNDYLPPTITEALKERRKLADRQQDV 592

Query: 1709 EEQARQRASALAVSNVKAAIGPLVAGTLAETMAANSRWGNQPSGEDIEKMKRDLALSKHA 1888
            EEQ RQ ASA   S VKA+  PLVAGTL ET+AA SRWG+QPSG DIE M+ D AL+K  
Sbjct: 593  EEQVRQVASAAIESKVKASNAPLVAGTLTETIAATSRWGSQPSGHDIENMREDSALAKLD 652

Query: 1889 SLVRYLEKKLTHAQEKVKKAERALGKVQESLNPTELPTDLETITDEERFLFRKIGLSMKP 2068
            SL+ YL+KKL  A+ KVK AE+ + K+QE   P++LPTDLETITDEER LFRKIGLSMKP
Sbjct: 653  SLIEYLKKKLALAKCKVKNAEKIIAKLQEKKEPSDLPTDLETITDEERLLFRKIGLSMKP 712

Query: 2069 FLVLGRRGVFGGTVENMHLHWKYRELVKIFVKGKSFPQVKHIAISLEAESGGLLVSLDKT 2248
            +L+LGRRGV+ GTVENMHLHWK+RELVKI V+GK+  QVKH+AISLEAES G+++SLDKT
Sbjct: 713  YLLLGRRGVYDGTVENMHLHWKFRELVKIIVRGKTLQQVKHVAISLEAESNGVVISLDKT 772

Query: 2249 TKGYAIIIYRGKNYQRPQAIRPKNLLTRRQALARSIELQRREALKHHISDLQDRIELLKS 2428
            TKGY +I+YRGKNY RP A+RPKN+LTRRQALARSIELQRREALKHHI DL+++IELLK+
Sbjct: 773  TKGYEVIVYRGKNYTRPDAMRPKNMLTRRQALARSIELQRREALKHHILDLEEKIELLKA 832

Query: 2429 ELDQ 2440
            EL++
Sbjct: 833  ELEE 836


>ref|XP_002514120.1| conserved hypothetical protein [Ricinus communis]
            gi|223546576|gb|EEF48074.1| conserved hypothetical
            protein [Ricinus communis]
          Length = 930

 Score =  823 bits (2125), Expect = 0.0
 Identities = 461/894 (51%), Positives = 586/894 (65%), Gaps = 62/894 (6%)
 Frame = +2

Query: 2    SSSSSFLVF-QTRENYPNSFRTLKLKTYCS-CQTIEVENEEPQRTXXXXXXXXXXXXXXX 175
            SSSS + +F Q R + P  F+    +T CS  ++I+V   + +R                
Sbjct: 40   SSSSRYPLFLQARSHSP--FKAFNFETNCSYSRSIQVSATKTKRKPRP------------ 85

Query: 176  SFHDIVRDKWSLKIGSQRLKFPWXXXXXXXXXXXXXXXXXHYSQIPNSSKE--------- 328
            SF + +RDKWSLK+ S R  FPW                 H  Q  N  +E         
Sbjct: 86   SFFEQIRDKWSLKVPSTRDTFPWQEPEQQQE---------HQGQGKNDEEEIERCEISGV 136

Query: 329  ---------------------NMRNRVISPPWIHGSKPRKTHFDSEIETAQNSCFEGENF 445
                                 ++ N + + PW+HG++P+K HF S  +  +N      + 
Sbjct: 137  TLSKAEIDANPSSIDDDSVSVSLPNHLTTAPWVHGTRPKKNHFSSRPKIGENVV--QNDV 194

Query: 446  GELSEKLEDLKRVADSNGKSEEEQEFEGFSASSPIEFVGEKEMNFD---------VNGIS 598
              + + +E+L++    N K ++E        +  +     KE+N+D         V G S
Sbjct: 195  HTVVDIVENLEKEVTCNDKFKKEDNILHVDNAERLV----KEVNYDKKFKEAKVQVGGFS 250

Query: 599  LDEKHTGLVEH--------FVNSSGLRSKG------------VSIPLPWERNRDLE-LES 715
            ++ K    +          ++N     + G             SI LPWE+ R +E +E 
Sbjct: 251  VELKRDNEIARAKYSKSPSYINEKPFGANGGYGVQVSYDDNSSSIELPWEKERVMESVEG 310

Query: 716  VNREKWRRSNTELAEKTIPEPELRRLRNVALRMKERIKVGSLGITQALVDRIHEKWKEDE 895
              R K  RSNTELAE+ +PE EL+RLRNVALRM ERIKVG+ GI Q LVD +HEKW+ DE
Sbjct: 311  YLRGK--RSNTELAERMLPEHELKRLRNVALRMYERIKVGAAGINQDLVDAVHEKWRLDE 368

Query: 896  VVKMKFEGPPVLNMKRTHEVLESKTGGLVIWRSGSTIVLYRGIAYKLPCVQTYTNQSRAN 1075
            VVK+KFE P   NM+RTHE+LE++TGGLVIWRSGS++VLYRGI+YKL CV++++ Q  A 
Sbjct: 369  VVKLKFEEPLSFNMRRTHEILENRTGGLVIWRSGSSVVLYRGISYKLHCVRSFSKQDEAG 428

Query: 1076 PNATHHLKDPTIDAVENVQQTDSVRTTESSGTGSVKLSNGPSDEQLMDISDHNHLLDELG 1255
                 H ++ T +A  N+     + TTES      K     S E+L D ++ N  LDELG
Sbjct: 429  KEILAHPEEVTSNATLNIGVKHFIGTTESYIPDRAKYLKDLSREELTDFTELNQFLDELG 488

Query: 1256 PRFKDWSGCNPQPVDADLLPCVIPGYTPPFRLLPFGIRHCLGNKQMTSYRRLARTMPPHF 1435
            PRF+DW G  P PVDADLL  V PGY PPFRLLP+G+RHCL +K+MT +RRLART+PPHF
Sbjct: 489  PRFEDWCGREPLPVDADLLLAVDPGYKPPFRLLPYGVRHCLTDKEMTIFRRLARTVPPHF 548

Query: 1436 ALGRNRELQGLAMAMVKLWERSAIAKIAIKRGVLNTCNERMAEEIKKLTGGTLVSRNKDY 1615
            ALGRNR+LQGLA A+VKLWERSAI KIAIKRGV NT NERMAEE+K LTGG L+SRNK+Y
Sbjct: 549  ALGRNRQLQGLAKAIVKLWERSAIVKIAIKRGVQNTRNERMAEELKVLTGGILLSRNKEY 608

Query: 1616 IVFYRGNDFLPPLVTNVLVERQKLADLRQDEEEQARQRASALAVSNVKAAIGPLVAGTLA 1795
            IVFYRGNDFLPP +   L ER+KL  L+QDEEEQARQ A A   S+ K +  PLVAGTLA
Sbjct: 609  IVFYRGNDFLPPAIVKTLKERKKLTYLKQDEEEQARQMALASVESSAKTSKVPLVAGTLA 668

Query: 1796 ETMAANSRWGNQPSGEDIEKMKRDLALSKHASLVRYLEKKLTHAQEKVKKAERALGKVQE 1975
            ET+AA S W +Q    DI++M R+  L+K ASLV++LE KL  A+ K++KAE+AL KV E
Sbjct: 669  ETVAATSHWRDQRGSPDIDEMLREAVLAKRASLVKHLENKLALAKGKLRKAEKALAKVHE 728

Query: 1976 SLNPTELPTDLETITDEERFLFRKIGLSMKPFLVLGRRGVFGGTVENMHLHWKYRELVKI 2155
             L+P+ LPTDLETI+DEERFLFRKIGLSMKP+L LG+RGV+ GT+ENMHLHWKYRELVK+
Sbjct: 729  HLDPSGLPTDLETISDEERFLFRKIGLSMKPYLFLGKRGVYDGTIENMHLHWKYRELVKV 788

Query: 2156 FVKGKSFPQVKHIAISLEAESGGLLVSLDKTTKGYAIIIYRGKNYQRPQAIRPKNLLTRR 2335
             V+GKSF QVKHIAISLEAESGG+LVS+++TTKGYAII+YRGKNY  P+ +RPKNLLT+R
Sbjct: 789  IVRGKSFAQVKHIAISLEAESGGVLVSIERTTKGYAIIVYRGKNYLHPEVMRPKNLLTKR 848

Query: 2336 QALARSIELQRREALKHHISDLQDRIELLKSELDQIEIVKETGNEKLYSRLNDA 2497
            QAL RSIELQRREALKHHISDLQ+RIELLK EL+ +E  KE   +K+ SRL+D+
Sbjct: 849  QALVRSIELQRREALKHHISDLQERIELLKLELEDMESGKEIDVDKMSSRLDDS 902


>ref|XP_006475466.1| PREDICTED: chloroplastic group IIA intron splicing facilitator CRS1,
            chloroplastic-like isoform X1 [Citrus sinensis]
            gi|568843115|ref|XP_006475467.1| PREDICTED: chloroplastic
            group IIA intron splicing facilitator CRS1,
            chloroplastic-like isoform X2 [Citrus sinensis]
            gi|568843117|ref|XP_006475468.1| PREDICTED: chloroplastic
            group IIA intron splicing facilitator CRS1,
            chloroplastic-like isoform X3 [Citrus sinensis]
            gi|568843119|ref|XP_006475469.1| PREDICTED: chloroplastic
            group IIA intron splicing facilitator CRS1,
            chloroplastic-like isoform X4 [Citrus sinensis]
          Length = 812

 Score =  818 bits (2113), Expect = 0.0
 Identities = 455/821 (55%), Positives = 556/821 (67%), Gaps = 11/821 (1%)
 Frame = +2

Query: 17   FLVFQTRENYPNSFRTLKLKTYCSCQTIEVENEEPQRTXXXXXXXXXXXXXXXSFHDIVR 196
            +L  + +    NSFR++++    S  TI+ +                      SF + +R
Sbjct: 23   YLPLKPQSQCSNSFRSIRIGICFSHLTIQAQ----------LGTTRTKRKVKPSFFEQIR 72

Query: 197  DKWSLKIGSQRLKFPWXXXXXXXXXXXXXXXXXHYSQIPNSSKEN-MRNRVISPPWIHGS 373
             KWS K+ S R KFPW                   S++ +    + + NR +S PWIHG+
Sbjct: 73   HKWSHKVISPREKFPWQEEEEEEEEVQNEPETDVESRVRSEPFSSALPNRFVSAPWIHGT 132

Query: 374  KPRKTHFDS---EIETAQNSCFEGENFGELSEKL------EDLKRVADSNGKSEEEQEFE 526
              ++  FDS   +I T +    +    G   + +      E      D  G   +E + +
Sbjct: 133  DSKEIKFDSPQTKITTKKEDIGDDGLLGSFEKTVVHSAVKEKTVIELDKEGDYNKELKTD 192

Query: 527  GFSA-SSPIEFVGEKEMNFDVNGISLDEKHTGLVEHFVNSSGLRSKGVSIPLPWERNRDL 703
                 ++PIE    K+ + +V   SL++K            G         LPW+RN D 
Sbjct: 193  EVKIDANPIEL--SKDRHREVG--SLNQKQI---------KGYHEVDDPSVLPWKRNTD- 238

Query: 704  ELESVNREKWRRSNTELAEKTIPEPELRRLRNVALRMKERIKVGSLGITQALVDRIHEKW 883
                    + RRSNTELAEK IPE EL+RLRN++LRM ER KVGS GITQALVD IHEKW
Sbjct: 239  --------RRRRSNTELAEKMIPEHELQRLRNISLRMLERTKVGSAGITQALVDSIHEKW 290

Query: 884  KEDEVVKMKFEGPPVLNMKRTHEVLESKTGGLVIWRSGSTIVLYRGIAYKLPCVQTYTNQ 1063
            K DEVVK+KFE P  L MKRTHE+LE +TGGLVIWRSGS++VL+RG+AYKLPCVQ++T  
Sbjct: 291  KLDEVVKLKFEEPHSLQMKRTHEILERRTGGLVIWRSGSSVVLFRGMAYKLPCVQSFTKH 350

Query: 1064 SRANPNATHHLKDPTIDAVENVQQTDSVRTTESSGTGSVKLSNGPSDEQLMDISDHNHLL 1243
                 N T   +D T + + NV +       ES    S       S E+LMD+ + N+LL
Sbjct: 351  -----NHTQQTQDVTNEVMRNVGEHPPRSAMESYVPDSANNLENLSKEELMDLCELNYLL 405

Query: 1244 DELGPRFKDWSGCNPQPVDADLLPCVIPGYTPPFRLLPFGIRHCLGNKQMTSYRRLARTM 1423
            DELGPRFKDW G  P PVDADLLP V+P Y PP RLLP+GI+  L + + T +RRLAR  
Sbjct: 406  DELGPRFKDWPGREPLPVDADLLPPVVPDYKPPLRLLPYGIKPGLRDCETTEFRRLARKT 465

Query: 1424 PPHFALGRNRELQGLAMAMVKLWERSAIAKIAIKRGVLNTCNERMAEEIKKLTGGTLVSR 1603
            PPHFALGRNRELQGLA AMVKLWE+SAIAKIAIKR V+NT NERMAEE+KKLTGGTL+ R
Sbjct: 466  PPHFALGRNRELQGLAKAMVKLWEKSAIAKIAIKRDVMNTRNERMAEELKKLTGGTLLCR 525

Query: 1604 NKDYIVFYRGNDFLPPLVTNVLVERQKLADLRQDEEEQARQRASALAVSNVKAAIGPLVA 1783
            NKDYIVFYRGNDFLPP+VT+ + ER KL D+RQDEEEQAR  ASAL     K  +G LVA
Sbjct: 526  NKDYIVFYRGNDFLPPVVTDAVKERSKLTDIRQDEEEQARHVASALIELKAKGFVGSLVA 585

Query: 1784 GTLAETMAANSRWGNQPSGEDIEKMKRDLALSKHASLVRYLEKKLTHAQEKVKKAERALG 1963
            GTLAET+AA SRWG QPS ED+EKM RD  LS+HASL+RYLE+KL  A+ K+K A++AL 
Sbjct: 586  GTLAETLAATSRWGRQPSYEDVEKMMRDSTLSRHASLLRYLEQKLALAKRKLKMADKALA 645

Query: 1964 KVQESLNPTELPTDLETITDEERFLFRKIGLSMKPFLVLGRRGVFGGTVENMHLHWKYRE 2143
            KVQESL+P ELP+DLETIT+EERFL RK+GLSMKP+L+LGRRG++ GT+ENMHLHWKYRE
Sbjct: 646  KVQESLDPAELPSDLETITNEERFLLRKMGLSMKPYLLLGRRGIYDGTIENMHLHWKYRE 705

Query: 2144 LVKIFVKGKSFPQVKHIAISLEAESGGLLVSLDKTTKGYAIIIYRGKNYQRPQAIRPKNL 2323
            LVKI VKGKSF QVK IAISLEAESGG+LVSLDKT KG AII+YRGKNY RP  +RP+NL
Sbjct: 706  LVKIIVKGKSFAQVKQIAISLEAESGGVLVSLDKTPKGIAIIVYRGKNYVRPLKLRPQNL 765

Query: 2324 LTRRQALARSIELQRREALKHHISDLQDRIELLKSELDQIE 2446
            L RRQALARS+ELQRRE LKHHI DL++RIEL+KSEL++IE
Sbjct: 766  LNRRQALARSVELQRREGLKHHILDLEERIELVKSELEEIE 806


>ref|XP_006451488.1| hypothetical protein CICLE_v10007477mg [Citrus clementina]
            gi|557554714|gb|ESR64728.1| hypothetical protein
            CICLE_v10007477mg [Citrus clementina]
          Length = 810

 Score =  818 bits (2113), Expect = 0.0
 Identities = 455/821 (55%), Positives = 556/821 (67%), Gaps = 11/821 (1%)
 Frame = +2

Query: 17   FLVFQTRENYPNSFRTLKLKTYCSCQTIEVENEEPQRTXXXXXXXXXXXXXXXSFHDIVR 196
            +L  + +    NSFR++++    S  TI+ +                      SF + +R
Sbjct: 21   YLPLKPQSQCSNSFRSIRIGICFSHLTIQAQ----------LGTTRTKRKVKPSFFEQIR 70

Query: 197  DKWSLKIGSQRLKFPWXXXXXXXXXXXXXXXXXHYSQIPNSSKEN-MRNRVISPPWIHGS 373
             KWS K+ S R KFPW                   S++ +    + + NR +S PWIHG+
Sbjct: 71   HKWSHKVISPREKFPWQEEEEEEEEVQNEPETDVESRVRSEPFSSALPNRFVSAPWIHGT 130

Query: 374  KPRKTHFDS---EIETAQNSCFEGENFGELSEKL------EDLKRVADSNGKSEEEQEFE 526
              ++  FDS   +I T +    +    G   + +      E      D  G   +E + +
Sbjct: 131  DSKEIKFDSPQTKITTKKEDIGDDGLLGSFEKTVVHSAVKEKTVIELDKEGDYNKELKTD 190

Query: 527  GFSA-SSPIEFVGEKEMNFDVNGISLDEKHTGLVEHFVNSSGLRSKGVSIPLPWERNRDL 703
                 ++PIE    K+ + +V   SL++K            G         LPW+RN D 
Sbjct: 191  EVKIDANPIEL--SKDRHREVG--SLNQKQI---------KGYHEVDDPSVLPWKRNTD- 236

Query: 704  ELESVNREKWRRSNTELAEKTIPEPELRRLRNVALRMKERIKVGSLGITQALVDRIHEKW 883
                    + RRSNTELAEK IPE EL+RLRN++LRM ER KVGS GITQALVD IHEKW
Sbjct: 237  --------RRRRSNTELAEKMIPEHELQRLRNISLRMLERTKVGSAGITQALVDSIHEKW 288

Query: 884  KEDEVVKMKFEGPPVLNMKRTHEVLESKTGGLVIWRSGSTIVLYRGIAYKLPCVQTYTNQ 1063
            K DEVVK+KFE P  L MKRTHE+LE +TGGLVIWRSGS++VL+RG+AYKLPCVQ++T  
Sbjct: 289  KLDEVVKLKFEEPHSLQMKRTHEILERRTGGLVIWRSGSSVVLFRGMAYKLPCVQSFTKH 348

Query: 1064 SRANPNATHHLKDPTIDAVENVQQTDSVRTTESSGTGSVKLSNGPSDEQLMDISDHNHLL 1243
                 N T   +D T + + NV +       ES    S       S E+LMD+ + N+LL
Sbjct: 349  -----NHTQQTQDVTNEVMRNVGEHPPRSAMESYVPDSANNLENLSKEELMDLCELNYLL 403

Query: 1244 DELGPRFKDWSGCNPQPVDADLLPCVIPGYTPPFRLLPFGIRHCLGNKQMTSYRRLARTM 1423
            DELGPRFKDW G  P PVDADLLP V+P Y PP RLLP+GI+  L + + T +RRLAR  
Sbjct: 404  DELGPRFKDWPGREPLPVDADLLPPVVPDYKPPLRLLPYGIKPGLRDCETTEFRRLARKT 463

Query: 1424 PPHFALGRNRELQGLAMAMVKLWERSAIAKIAIKRGVLNTCNERMAEEIKKLTGGTLVSR 1603
            PPHFALGRNRELQGLA AMVKLWE+SAIAKIAIKR V+NT NERMAEE+KKLTGGTL+ R
Sbjct: 464  PPHFALGRNRELQGLAKAMVKLWEKSAIAKIAIKRDVMNTRNERMAEELKKLTGGTLLCR 523

Query: 1604 NKDYIVFYRGNDFLPPLVTNVLVERQKLADLRQDEEEQARQRASALAVSNVKAAIGPLVA 1783
            NKDYIVFYRGNDFLPP+VT+ + ER KL D+RQDEEEQAR  ASAL     K  +G LVA
Sbjct: 524  NKDYIVFYRGNDFLPPVVTDAVKERSKLTDIRQDEEEQARHVASALIELKAKGFVGSLVA 583

Query: 1784 GTLAETMAANSRWGNQPSGEDIEKMKRDLALSKHASLVRYLEKKLTHAQEKVKKAERALG 1963
            GTLAET+AA SRWG QPS ED+EKM RD  LS+HASL+RYLE+KL  A+ K+K A++AL 
Sbjct: 584  GTLAETLAATSRWGRQPSYEDVEKMMRDSTLSRHASLLRYLEQKLALAKRKLKMADKALA 643

Query: 1964 KVQESLNPTELPTDLETITDEERFLFRKIGLSMKPFLVLGRRGVFGGTVENMHLHWKYRE 2143
            KVQESL+P ELP+DLETIT+EERFL RK+GLSMKP+L+LGRRG++ GT+ENMHLHWKYRE
Sbjct: 644  KVQESLDPAELPSDLETITNEERFLLRKMGLSMKPYLLLGRRGIYDGTIENMHLHWKYRE 703

Query: 2144 LVKIFVKGKSFPQVKHIAISLEAESGGLLVSLDKTTKGYAIIIYRGKNYQRPQAIRPKNL 2323
            LVKI VKGKSF QVK IAISLEAESGG+LVSLDKT KG AII+YRGKNY RP  +RP+NL
Sbjct: 704  LVKIIVKGKSFAQVKQIAISLEAESGGVLVSLDKTPKGIAIIVYRGKNYVRPLKLRPQNL 763

Query: 2324 LTRRQALARSIELQRREALKHHISDLQDRIELLKSELDQIE 2446
            L RRQALARS+ELQRRE LKHHI DL++RIEL+KSEL++IE
Sbjct: 764  LNRRQALARSVELQRREGLKHHILDLEERIELVKSELEEIE 804


>ref|XP_002309217.2| hypothetical protein POPTR_0006s15340g [Populus trichocarpa]
            gi|550336383|gb|EEE92740.2| hypothetical protein
            POPTR_0006s15340g [Populus trichocarpa]
          Length = 977

 Score =  815 bits (2106), Expect = 0.0
 Identities = 421/638 (65%), Positives = 506/638 (79%), Gaps = 3/638 (0%)
 Frame = +2

Query: 593  ISLDEKHTGLVEHF-VNSSGLRSKGVSIPLPWERNRDLELESVNREKWRR-SNTELAEKT 766
            +S+ +K  G  E+  V+++G+ +   S  LPW+R   L+  S+  +K R+ SNT+LAE+ 
Sbjct: 309  VSVSKKQLGDFENVEVSNNGVSN---SNELPWKRTSGLD--SLGEDKSRKKSNTDLAERM 363

Query: 767  IPEPELRRLRNVALRMKERIKVGSLGITQALVDRIHEKWKEDEVVKMKFEGPPVLNMKRT 946
            +PE EL+RLRNVALRM ERIKVG+ GITQ LVD IHEKWK DEVVK+KFE P   NMKRT
Sbjct: 364  LPEHELKRLRNVALRMLERIKVGATGITQDLVDAIHEKWKLDEVVKLKFEWPLSCNMKRT 423

Query: 947  HEVLESKTGGLVIWRSGSTIVLYRGIAYKLPCVQTYTNQSRANPNATHHLKDPTIDAVEN 1126
            HE+LES+TGGL+IWRSGS++V+YRG  YK  CVQ+YT Q+ A  +   + ++ T  A  +
Sbjct: 424  HEILESRTGGLIIWRSGSSVVMYRGTTYKFQCVQSYTKQNEAGMDVLQYAEEATNSATSS 483

Query: 1127 VQQTDSVRTTESSGTGSVKLSNGPSDEQLMDISDHNHLLDELGPRFKDWSGCNPQPVDAD 1306
                D  RT ES    + K     S E+LMD S+ NHLLDELGPR+KDW G  P PVDAD
Sbjct: 484  AGMKDLARTMESIIPDAAKYLKDLSQEELMDFSELNHLLDELGPRYKDWCGREPLPVDAD 543

Query: 1307 LLPCVIPGYTPPFRLLPFGIRHCLGNKQMTSYRRLARTMPPHFALGRNRELQGLAMAMVK 1486
            LLP V+PGY  P RLLP+G++ CL NK  T++RRLART PPHF LGRNRELQGLA AMVK
Sbjct: 544  LLPAVVPGYKSPLRLLPYGVKPCLSNKNTTNFRRLARTTPPHFVLGRNRELQGLANAMVK 603

Query: 1487 LWERSAIAKIAIKRGVLNTCNERMAEEIKKLTGGTLVSRNKDYIVFYRGNDFLPPLVTNV 1666
            LWERSAIAKIAIKRGV  T NE MAEE+K+LTGGTL+SRNK+YIVFYRGNDFLPP++   
Sbjct: 604  LWERSAIAKIAIKRGVQYTRNEIMAEELKRLTGGTLLSRNKEYIVFYRGNDFLPPVINET 663

Query: 1667 LVERQKLADLRQDEEEQARQRASALAVSNVKAAIGPLVAGTLAETMAANSRWGNQPSGED 1846
            L ER+KLA L QDEE+QARQ  SA   S+VK   GPLVAGTL ET+AA SRWGNQPS ED
Sbjct: 664  LKERRKLAFLYQDEEDQARQMTSAFIGSSVKTTKGPLVAGTLVETVAAISRWGNQPSSED 723

Query: 1847 IEKMKRDLALSKHASLVRYLEKKLTHAQEKVKKAERALGKVQESLNPTELPTDLETITDE 2026
            +E+M RD AL++HASLV++LE KL  A+ K+KK+E+ L KVQE+L PTELPTDLETI+DE
Sbjct: 724  VEEMIRDSALARHASLVKHLENKLAQAKGKLKKSEKDLAKVQENLEPTELPTDLETISDE 783

Query: 2027 ERFLFRKIGLSMKPFLVLGRRGVFGGTVENMHLHWKYRELVKIFVKGKSFPQVKHIAISL 2206
            ERFLFRKIGLSMKP+L LGRRGVF GT+ENMHLHWKYRELVKI V+ K   QVKHIAISL
Sbjct: 784  ERFLFRKIGLSMKPYLFLGRRGVFDGTIENMHLHWKYRELVKIIVERKGIAQVKHIAISL 843

Query: 2207 EAESGGLLVSLDKTTKGYAIIIYRGKNYQRPQAIRPKNLLTRRQALARSIELQRREALKH 2386
            EAESGG+LVS+D+TTKGYAII+YRGKNY RPQA+RP+NLLTRRQALARS+ELQR EALKH
Sbjct: 844  EAESGGVLVSVDRTTKGYAIIVYRGKNYMRPQAMRPENLLTRRQALARSVELQRYEALKH 903

Query: 2387 HISDLQDRIELLKSELDQIEIVKETGNEK-LYSRLNDA 2497
            HI+DLQ+RIEL+ SEL+++E  K++   K LYS+ +DA
Sbjct: 904  HITDLQERIELVTSELEEMEADKKSEVYKALYSKFDDA 941



 Score = 59.3 bits (142), Expect = 9e-06
 Identities = 45/150 (30%), Positives = 65/150 (43%), Gaps = 10/150 (6%)
 Frame = +2

Query: 5   SSSSFLVFQTRENYPNSFRTLKLKTYC-SCQTIEVENEEPQRTXXXXXXXXXXXXXXXSF 181
           SS + L+ Q +   P +F   K  TYC S +T++V   + +R                SF
Sbjct: 10  SSLNPLLLQPQNPSPITF---KFTTYCPSNRTVQVHAAKSKRKPKP------------SF 54

Query: 182 HDIVRDKWSLKIGSQRLKFPWXXXXXXXXXXXXXXXXXHYSQI------PNSSKE---NM 334
            + +  KWSLK+ S R KFPW                     I      P+ S     N+
Sbjct: 55  FEQIHHKWSLKLTSTRDKFPWQEQEQQQQQQQEEEEEEEEEDIKEVDAVPSVSDTVSFNL 114

Query: 335 RNRVISPPWIHGSKPRKTHFDSEIETAQNS 424
            NR+ +PPWIHG+ P++ HFD +     NS
Sbjct: 115 PNRLTTPPWIHGATPKQAHFDYQPRKGDNS 144


>ref|XP_004171699.1| PREDICTED: chloroplastic group IIA intron splicing facilitator CRS1,
            chloroplastic-like, partial [Cucumis sativus]
          Length = 789

 Score =  815 bits (2106), Expect = 0.0
 Identities = 442/784 (56%), Positives = 544/784 (69%), Gaps = 29/784 (3%)
 Frame = +2

Query: 176  SFHDIVRDKWSLKIGSQRLKFPWXXXXXXXXXXXXXXXXXHYSQ-------------IPN 316
            SF + +R KWS K  S    FPW                    +             IP 
Sbjct: 23   SFLEQIRHKWSTKPISSTHTFPWQQQEQDRHHKQDEGEGEEEEEEEEEQVANQTSVSIPE 82

Query: 317  SSKENMR----NRVISPPWIHGSKPRKTHFDSEIETAQNSCFEGENFGELSEKLEDLKRV 484
            S+ +  +     R IS PW HGS+ R T FD + +T       GE   E+S+   D    
Sbjct: 83   STTDVTQAVPITRSISAPWAHGSQSRNTQFDFKPKTPN-----GEVINEISKISTD---- 133

Query: 485  ADSNGKSEEEQEFEGFSASSPIEFVGEKEMNFDVNGISLDEKHTGLVEHFVNS-SGLRSK 661
             D++ ++      +  S  S      E E   D   + + EK + L +  V+S S     
Sbjct: 134  -DTSNRNASTISIDEISDDS-----SEDEAEIDTVVLPVTEKRSTLSKKIVHSVSSDNDD 187

Query: 662  GVSIPLPWERN--RDLELESVNREKWRRSNTELAEKTIPEPELRRLRNVALRMKERIKVG 835
               + LPW+R   RD E+++  R    RS T LAE+ +PE ELRRLRN++LRM ERI+VG
Sbjct: 188  NGRVDLPWKREPRRDSEVDAGQR----RSKTLLAEQMLPEHELRRLRNISLRMVERIEVG 243

Query: 836  SLGITQALVDRIHEKWKEDEVVKMKFEGPPVLNMKRTHEVLESKTGGLVIWRSGSTIVLY 1015
              GITQ L+D IHEKWK DEVVK+KFEGP  +NMKR HE LE++TGGLVIWRSGS IVLY
Sbjct: 244  VKGITQELLDSIHEKWKVDEVVKLKFEGPLTVNMKRAHEKLENRTGGLVIWRSGSLIVLY 303

Query: 1016 RGIAYKLPCVQTYTNQSRANPNATHHLKDPTIDAVENVQQTDSVR---------TTESSG 1168
            RG+ Y LPCVQ+Y  Q++A  N        T+D   NV+  D  R         T  +  
Sbjct: 304  RGMTYHLPCVQSYAKQNQAKSN--------TLDVPNNVESDDITRNEKLHTTVGTMSTIV 355

Query: 1169 TGSVKLSNGPSDEQLMDISDHNHLLDELGPRFKDWSGCNPQPVDADLLPCVIPGYTPPFR 1348
            +G+ K +   S ++LM++SD NHLLDE+GPRFKDWSGC P PVDADLLP ++PGY PP R
Sbjct: 356  SGASKHTKTLSKKELMELSDLNHLLDEIGPRFKDWSGCEPVPVDADLLPGIVPGYKPPTR 415

Query: 1349 LLPFGIRHCLGNKQMTSYRRLARTMPPHFALGRNRELQGLAMAMVKLWERSAIAKIAIKR 1528
            +LP+G+RHCL NK++T +RRLAR MPPHFALGRNR+LQGLA AMVKLWE+ AIAKIAIKR
Sbjct: 416  ILPYGVRHCLRNKEVTIFRRLARKMPPHFALGRNRQLQGLANAMVKLWEKCAIAKIAIKR 475

Query: 1529 GVLNTCNERMAEEIKKLTGGTLVSRNKDYIVFYRGNDFLPPLVTNVLVERQKLADLRQDE 1708
            GV NT NERMAEE++ LTGGTL+SRNK+YIVFYRGND+LPP +T  L ER+KLAD +QD 
Sbjct: 476  GVENTRNERMAEELRILTGGTLLSRNKEYIVFYRGNDYLPPTITEALKERRKLADRQQDV 535

Query: 1709 EEQARQRASALAVSNVKAAIGPLVAGTLAETMAANSRWGNQPSGEDIEKMKRDLALSKHA 1888
            EEQ RQ ASA   S VKA+  PLVAGTL ET+AA SRWG+QPSG DIE M+ D AL+K  
Sbjct: 536  EEQVRQVASAAIESKVKASNAPLVAGTLTETIAATSRWGSQPSGHDIENMREDSALAKLD 595

Query: 1889 SLVRYLEKKLTHAQEKVKKAERALGKVQESLNPTELPTDLETITDEERFLFRKIGLSMKP 2068
            SL+ YL+KKL  A+ KVK AE+ + K+QE   P++LPTDLETITDEER LFRKIGLSMKP
Sbjct: 596  SLIEYLKKKLALAKCKVKNAEKIIAKLQEKKEPSDLPTDLETITDEERLLFRKIGLSMKP 655

Query: 2069 FLVLGRRGVFGGTVENMHLHWKYRELVKIFVKGKSFPQVKHIAISLEAESGGLLVSLDKT 2248
            +L+LGRRGV+ GTVENMHLHWK+RELVKI V+GK+  QVKH+AISLEAES G+++SLDKT
Sbjct: 656  YLLLGRRGVYDGTVENMHLHWKFRELVKIIVRGKTLQQVKHVAISLEAESNGVVISLDKT 715

Query: 2249 TKGYAIIIYRGKNYQRPQAIRPKNLLTRRQALARSIELQRREALKHHISDLQDRIELLKS 2428
            TKGY +I+YRGKNY RP A+RPKN+LTRRQALARSIELQRREALKHHI DL+++IELLK+
Sbjct: 716  TKGYEVIVYRGKNYTRPDAMRPKNMLTRRQALARSIELQRREALKHHILDLEEKIELLKA 775

Query: 2429 ELDQ 2440
            EL++
Sbjct: 776  ELEE 779


>ref|XP_006475470.1| PREDICTED: chloroplastic group IIA intron splicing facilitator CRS1,
            chloroplastic-like isoform X5 [Citrus sinensis]
          Length = 803

 Score =  813 bits (2100), Expect = 0.0
 Identities = 453/817 (55%), Positives = 552/817 (67%), Gaps = 11/817 (1%)
 Frame = +2

Query: 17   FLVFQTRENYPNSFRTLKLKTYCSCQTIEVENEEPQRTXXXXXXXXXXXXXXXSFHDIVR 196
            +L  + +    NSFR++++    S  TI+ +                      SF + +R
Sbjct: 23   YLPLKPQSQCSNSFRSIRIGICFSHLTIQAQ----------LGTTRTKRKVKPSFFEQIR 72

Query: 197  DKWSLKIGSQRLKFPWXXXXXXXXXXXXXXXXXHYSQIPNSSKEN-MRNRVISPPWIHGS 373
             KWS K+ S R KFPW                   S++ +    + + NR +S PWIHG+
Sbjct: 73   HKWSHKVISPREKFPWQEEEEEEEEVQNEPETDVESRVRSEPFSSALPNRFVSAPWIHGT 132

Query: 374  KPRKTHFDS---EIETAQNSCFEGENFGELSEKL------EDLKRVADSNGKSEEEQEFE 526
              ++  FDS   +I T +    +    G   + +      E      D  G   +E + +
Sbjct: 133  DSKEIKFDSPQTKITTKKEDIGDDGLLGSFEKTVVHSAVKEKTVIELDKEGDYNKELKTD 192

Query: 527  GFSA-SSPIEFVGEKEMNFDVNGISLDEKHTGLVEHFVNSSGLRSKGVSIPLPWERNRDL 703
                 ++PIE    K+ + +V   SL++K            G         LPW+RN D 
Sbjct: 193  EVKIDANPIEL--SKDRHREVG--SLNQKQI---------KGYHEVDDPSVLPWKRNTD- 238

Query: 704  ELESVNREKWRRSNTELAEKTIPEPELRRLRNVALRMKERIKVGSLGITQALVDRIHEKW 883
                    + RRSNTELAEK IPE EL+RLRN++LRM ER KVGS GITQALVD IHEKW
Sbjct: 239  --------RRRRSNTELAEKMIPEHELQRLRNISLRMLERTKVGSAGITQALVDSIHEKW 290

Query: 884  KEDEVVKMKFEGPPVLNMKRTHEVLESKTGGLVIWRSGSTIVLYRGIAYKLPCVQTYTNQ 1063
            K DEVVK+KFE P  L MKRTHE+LE +TGGLVIWRSGS++VL+RG+AYKLPCVQ++T  
Sbjct: 291  KLDEVVKLKFEEPHSLQMKRTHEILERRTGGLVIWRSGSSVVLFRGMAYKLPCVQSFTKH 350

Query: 1064 SRANPNATHHLKDPTIDAVENVQQTDSVRTTESSGTGSVKLSNGPSDEQLMDISDHNHLL 1243
                 N T   +D T + + NV +       ES    S       S E+LMD+ + N+LL
Sbjct: 351  -----NHTQQTQDVTNEVMRNVGEHPPRSAMESYVPDSANNLENLSKEELMDLCELNYLL 405

Query: 1244 DELGPRFKDWSGCNPQPVDADLLPCVIPGYTPPFRLLPFGIRHCLGNKQMTSYRRLARTM 1423
            DELGPRFKDW G  P PVDADLLP V+P Y PP RLLP+GI+  L + + T +RRLAR  
Sbjct: 406  DELGPRFKDWPGREPLPVDADLLPPVVPDYKPPLRLLPYGIKPGLRDCETTEFRRLARKT 465

Query: 1424 PPHFALGRNRELQGLAMAMVKLWERSAIAKIAIKRGVLNTCNERMAEEIKKLTGGTLVSR 1603
            PPHFALGRNRELQGLA AMVKLWE+SAIAKIAIKR V+NT NERMAEE+KKLTGGTL+ R
Sbjct: 466  PPHFALGRNRELQGLAKAMVKLWEKSAIAKIAIKRDVMNTRNERMAEELKKLTGGTLLCR 525

Query: 1604 NKDYIVFYRGNDFLPPLVTNVLVERQKLADLRQDEEEQARQRASALAVSNVKAAIGPLVA 1783
            NKDYIVFYRGNDFLPP+VT+ + ER KL D+RQDEEEQAR  ASAL     K  +G LVA
Sbjct: 526  NKDYIVFYRGNDFLPPVVTDAVKERSKLTDIRQDEEEQARHVASALIELKAKGFVGSLVA 585

Query: 1784 GTLAETMAANSRWGNQPSGEDIEKMKRDLALSKHASLVRYLEKKLTHAQEKVKKAERALG 1963
            GTLAET+AA SRWG QPS ED+EKM RD  LS+HASL+RYLE+KL  A+ K+K A++AL 
Sbjct: 586  GTLAETLAATSRWGRQPSYEDVEKMMRDSTLSRHASLLRYLEQKLALAKRKLKMADKALA 645

Query: 1964 KVQESLNPTELPTDLETITDEERFLFRKIGLSMKPFLVLGRRGVFGGTVENMHLHWKYRE 2143
            KVQESL+P ELP+DLETIT+EERFL RK+GLSMKP+L+LGRRG++ GT+ENMHLHWKYRE
Sbjct: 646  KVQESLDPAELPSDLETITNEERFLLRKMGLSMKPYLLLGRRGIYDGTIENMHLHWKYRE 705

Query: 2144 LVKIFVKGKSFPQVKHIAISLEAESGGLLVSLDKTTKGYAIIIYRGKNYQRPQAIRPKNL 2323
            LVKI VKGKSF QVK IAISLEAESGG+LVSLDKT KG AII+YRGKNY RP  +RP+NL
Sbjct: 706  LVKIIVKGKSFAQVKQIAISLEAESGGVLVSLDKTPKGIAIIVYRGKNYVRPLKLRPQNL 765

Query: 2324 LTRRQALARSIELQRREALKHHISDLQDRIELLKSEL 2434
            L RRQALARS+ELQRRE LKHHI DL++RIEL+KSEL
Sbjct: 766  LNRRQALARSVELQRREGLKHHILDLEERIELVKSEL 802


>gb|EYU29891.1| hypothetical protein MIMGU_mgv1a001353mg [Mimulus guttatus]
          Length = 835

 Score =  800 bits (2066), Expect = 0.0
 Identities = 449/852 (52%), Positives = 570/852 (66%), Gaps = 20/852 (2%)
 Frame = +2

Query: 2    SSSSSFLVFQTRENYPNSFRTLKLKTYCSCQTIEVENEEPQRTXXXXXXXXXXXXXXXSF 181
            S S  FL F  R    NS + +     C  QT++++NE    T               SF
Sbjct: 21   SQSFFFLKFNPRTRSLNSRKIIN----CCQQTVQLDNE----TLHTITLVKKKRKPRPSF 72

Query: 182  HDIVRDKWSLKIGSQRLKFPWXXXXXXXXXXXXXXXXXHYSQIPNSSKE-----NMRNRV 346
             + +++KWSLK  S R  FPW                  +SQ  +S+KE     ++  RV
Sbjct: 73   VEQIQNKWSLKTPSLRENFPWQEEQEEFRAQTTP-----FSQNVSSAKEIEVSVSVSERV 127

Query: 347  ----------ISPPWIHGSKPRKTHFDSEIETAQNSCFEGENFGELSEKLEDLKRVADSN 496
                      I  PW+HG++ R+     E+  ++ S    EN     E L    RV    
Sbjct: 128  VVTHVKKPKSILAPWVHGNESRR-----ELPVSEGSTKNQENVRTEKEFLVSPVRVLAEY 182

Query: 497  GKSEEEQ-EFEGFSASSPIEFVGEKEMNFDVNGISLDEKHTGLVEHFVNSSGLRSKGVSI 673
            GKS+E+  EF+     +PI      E N  V   +  ++    ++  VN  GL       
Sbjct: 183  GKSDEKFIEFD----ETPIRLT---EKNAVVENSATTDRTATRIKPSVNGDGLNR----- 230

Query: 674  PLPWERNRDLELESVNREKWRRSNTELAEKTIPEPELRRLRNVALRMKERIKVGSLGITQ 853
             LPWER  D E   V ++K R+++T LAE  +PE EL+RLRNV+LRM ERIKVG+ G+TQ
Sbjct: 231  -LPWERKNDEEF--VKKDKLRKTSTSLAEGLVPEHELKRLRNVSLRMVERIKVGAAGVTQ 287

Query: 854  ALVDRIHEKWKEDEVVKMKFEGPPVLNMKRTHEVLESKTGGLVIWRSGSTIVLYRGIAYK 1033
            ALVD IH+KWK +EVVK+KF GPP  NMKRTHE+LE +TGGLVIWRSGS++VLYRG+ Y 
Sbjct: 288  ALVDSIHDKWKNEEVVKLKFLGPPSKNMKRTHEILERRTGGLVIWRSGSSLVLYRGMTYN 347

Query: 1034 LPCVQTYTNQSRANPNATHHLKDPTIDAVENVQQTDSVRTTESSGTGSVKLSNGPSDEQL 1213
            L CV++YT     +       K+ +   ++  +     R  ESSGT      N  S+E+ 
Sbjct: 348  LDCVKSYTKHVEDDAEELESSKEDSPQRIKVKK-----RPGESSGTFDSDYFNNLSEEEQ 402

Query: 1214 MDISDHNHLLDELGPRFKDWSGCNPQPVDADLLPCVIPGYTPPFRLLPFGIRHCLGNKQM 1393
            MD+S+ N LLDELGPRF DWSG +P PVDADLLP V+PGY  P+RLLP GIR  L +KQM
Sbjct: 403  MDLSEMNLLLDELGPRFIDWSGRDPLPVDADLLPPVVPGYKTPYRLLPHGIRQPLRDKQM 462

Query: 1394 TSYRRLARTMPPHFALGRNRELQGLAMAMVKLWERSAIAKIAIKRGVLNTCNERMAEEIK 1573
            T  RR ARTMPPHF LGRNRELQGLA+AMVKLWE+S++AKIAIKRGVLNT NERMAEE+K
Sbjct: 463  TYIRRTARTMPPHFVLGRNRELQGLALAMVKLWEKSSLAKIAIKRGVLNTSNERMAEELK 522

Query: 1574 KLTGGTLVSRNKDYIVFYRGNDFLPPLVTNVLVERQKLADLRQDEEEQARQRASALAVSN 1753
            +LTGGTLVSRNK++IVFYRGNDFLPP +++ L E++    L+QD EE+ARQRA++L    
Sbjct: 523  RLTGGTLVSRNKEFIVFYRGNDFLPPGISSALTEKENSITLQQDHEEKARQRAASLIEPK 582

Query: 1754 VKAAIGP----LVAGTLAETMAANSRWGNQPSGEDIEKMKRDLALSKHASLVRYLEKKLT 1921
            +KA        LVAGTLAET+AA +RWGNQ +G D+EKM R+ A+ +HA LV  L+KKL 
Sbjct: 583  LKALSKKHKPLLVAGTLAETIAATTRWGNQSNGADMEKMMRENAVDRHAFLVNSLQKKLA 642

Query: 1922 HAQEKVKKAERALGKVQESLNPTELPTDLETITDEERFLFRKIGLSMKPFLVLGRRGVFG 2101
             A+EK++KAE++L KV E+  P +LPTDLET+TDEERFLFR+IGLSMKP+L+LGRR +F 
Sbjct: 643  LAKEKMRKAEKSLQKVLENQEPGDLPTDLETLTDEERFLFRRIGLSMKPYLLLGRREIFD 702

Query: 2102 GTVENMHLHWKYRELVKIFVKGKSFPQVKHIAISLEAESGGLLVSLDKTTKGYAIIIYRG 2281
            GT+ENMHLHWKYRELVKI V+ K+FPQVKHIA+SLEAESGG+LVS+DKT KGY II+YRG
Sbjct: 703  GTIENMHLHWKYRELVKIMVQRKTFPQVKHIAVSLEAESGGVLVSVDKTFKGYVIIVYRG 762

Query: 2282 KNYQRPQAIRPKNLLTRRQALARSIELQRREALKHHISDLQDRIELLKSELDQIEIVKET 2461
            KNYQ P A RP+NLLT+RQALARSIELQRREALKHH+ +L+++ E LK EL+ +    + 
Sbjct: 763  KNYQSPLAFRPRNLLTKRQALARSIELQRREALKHHVWELEEKFEKLKQELEDMMAANKN 822

Query: 2462 GNEKLYSRLNDA 2497
            G E   SR+N A
Sbjct: 823  GAESSGSRINSA 834


>ref|XP_006357699.1| PREDICTED: chloroplastic group IIA intron splicing facilitator CRS1,
            chloroplastic-like isoform X1 [Solanum tuberosum]
            gi|565382761|ref|XP_006357700.1| PREDICTED: chloroplastic
            group IIA intron splicing facilitator CRS1,
            chloroplastic-like isoform X2 [Solanum tuberosum]
          Length = 820

 Score =  798 bits (2062), Expect = 0.0
 Identities = 435/777 (55%), Positives = 541/777 (69%), Gaps = 5/777 (0%)
 Frame = +2

Query: 176  SFHDIVRDKWSLKIGSQRLKFPWXXXXXXXXXXXXXXXXXHYSQIPN-----SSKENMRN 340
            SF   V+DKWS+K  S R KFPW                  +S++ N     S     R 
Sbjct: 70   SFVKQVQDKWSVKPTSLREKFPWQEGNSVSVEEVVERQV-QFSELENPVVNESVSSGSRV 128

Query: 341  RVISPPWIHGSKPRKTHFDSEIETAQNSCFEGENFGELSEKLEDLKRVADSNGKSEEEQE 520
            +V   PW+HG +P+ +              E    G+  E  ED+  + +    +++   
Sbjct: 129  KVNLAPWVHGKQPKISQVG-----------ESSTVGKSLENCEDIGSIREQKSLNKQVN- 176

Query: 521  FEGFSASSPIEFVGEKEMNFDVNGISLDEKHTGLVEHFVNSSGLRSKGVSIPLPWERNRD 700
            F+     SP +   EK+       I L+ K    V+      G+ +   S+ LPWE    
Sbjct: 177  FDCAPLRSPQQQDFEKD-------IKLESKAEARVD-----KGITNAKDSVRLPWEG--- 221

Query: 701  LELESVNREKWRRSNTELAEKTIPEPELRRLRNVALRMKERIKVGSLGITQALVDRIHEK 880
                    +K R+SN ELAEK IPE +L+RLRN ALRM ERIKVGS G+TQ LVD I +K
Sbjct: 222  --------DKLRKSNAELAEKLIPEAQLKRLRNAALRMVERIKVGSGGVTQELVDSIQDK 273

Query: 881  WKEDEVVKMKFEGPPVLNMKRTHEVLESKTGGLVIWRSGSTIVLYRGIAYKLPCVQTYTN 1060
            WK DE+VK++FEGPP  NMKRTH++LE +TGGLVIWRSGS+IVLYRGI+YKLPCVQ++T+
Sbjct: 274  WKVDEIVKLRFEGPPSHNMKRTHDILEHRTGGLVIWRSGSSIVLYRGISYKLPCVQSFTS 333

Query: 1061 QSRANPNATHHLKDPTIDAVENVQQTDSVRTTESSGTGSVKLSNGPSDEQLMDISDHNHL 1240
            ++     + +    P  D+ +++         E    GS  LS+    E+++D+S+ N +
Sbjct: 334  KNHDVDESEY----PNNDSCQSLGVKCLNEAAERPRNGSTDLSS----EEIVDLSELNMI 385

Query: 1241 LDELGPRFKDWSGCNPQPVDADLLPCVIPGYTPPFRLLPFGIRHCLGNKQMTSYRRLART 1420
            LDE+GPRFKDWSG  P PVDADLLP V+PGY PPFR LP+G +  L NK+MT  RR AR 
Sbjct: 386  LDEVGPRFKDWSGREPLPVDADLLPAVVPGYRPPFRRLPYGAKLNLKNKEMTYLRRTARI 445

Query: 1421 MPPHFALGRNRELQGLAMAMVKLWERSAIAKIAIKRGVLNTCNERMAEEIKKLTGGTLVS 1600
            MPPHFALGRNR+LQGLA AMVKLW RSAIAKIAIKRGVLNT NERM+EE+K LTGGTL+S
Sbjct: 446  MPPHFALGRNRQLQGLAAAMVKLWRRSAIAKIAIKRGVLNTSNERMSEELKVLTGGTLLS 505

Query: 1601 RNKDYIVFYRGNDFLPPLVTNVLVERQKLADLRQDEEEQARQRASALAVSNVKAAIGPLV 1780
            RNKDYIVFYRGNDFLPP VT  L E ++ +D  QD+EEQARQRA     S+ +A   PLV
Sbjct: 506  RNKDYIVFYRGNDFLPPRVTEALEEAERKSDFLQDQEEQARQRAVTSIDSDTRAPKRPLV 565

Query: 1781 AGTLAETMAANSRWGNQPSGEDIEKMKRDLALSKHASLVRYLEKKLTHAQEKVKKAERAL 1960
            AGTL+ETMAA SRWGNQPS E+ EKM RD A+++HASLV+YLE+KL  A+ KVKKAE  L
Sbjct: 566  AGTLSETMAATSRWGNQPSIEEREKMMRDAAVARHASLVKYLEEKLALAKGKVKKAENML 625

Query: 1961 GKVQESLNPTELPTDLETITDEERFLFRKIGLSMKPFLVLGRRGVFGGTVENMHLHWKYR 2140
             K+QE+  P+ELPTDLE ++ EERFLFRK+GLSMKPFL+LGRR VF GT+EN+HLHWKYR
Sbjct: 626  RKLQENREPSELPTDLEILSAEERFLFRKMGLSMKPFLLLGRRDVFDGTIENIHLHWKYR 685

Query: 2141 ELVKIFVKGKSFPQVKHIAISLEAESGGLLVSLDKTTKGYAIIIYRGKNYQRPQAIRPKN 2320
            ELVKI  + ++  Q+KHIAI+LEAESGGLLVS+DKTT+GYAII+YRGKNYQRP   RPKN
Sbjct: 686  ELVKIIAERRNTAQIKHIAITLEAESGGLLVSIDKTTQGYAIILYRGKNYQRPNEFRPKN 745

Query: 2321 LLTRRQALARSIELQRREALKHHISDLQDRIELLKSELDQIEIVKETGNEKLYSRLN 2491
            LLT+RQALARSIELQRREALKHHI+ LQD+I+ LKSEL+   +V+E   E L+SRL+
Sbjct: 746  LLTKRQALARSIELQRREALKHHITALQDKIQNLKSELEDTNMVEEIDEETLFSRLD 802


>ref|XP_004243753.1| PREDICTED: chloroplastic group IIA intron splicing facilitator CRS1,
            chloroplastic-like [Solanum lycopersicum]
          Length = 812

 Score =  795 bits (2054), Expect = 0.0
 Identities = 436/777 (56%), Positives = 538/777 (69%), Gaps = 5/777 (0%)
 Frame = +2

Query: 176  SFHDIVRDKWSLKIGSQRLKFPWXXXXXXXXXXXXXXXXXHYSQIPN-----SSKENMRN 340
            SF   V+DKWS+K  S R KFPW                   S++ N     S     R 
Sbjct: 70   SFVKQVQDKWSVKPTSLREKFPWQEGNSVSVEEVVEAQV-QISKLENPVVNDSVSSGSRV 128

Query: 341  RVISPPWIHGSKPRKTHFDSEIETAQNSCFEGENFGELSEKLEDLKRVADSNGKSEEEQE 520
            +V   PW+HG +P+ +              E  +  +  E  ED+       G S E++ 
Sbjct: 129  KVNLAPWVHGKQPKISQLG-----------ESSSLDKSLENCEDI-------GSSREQKS 170

Query: 521  FEGFSASSPIEFVGEKEMNFDVNGISLDEKHTGLVEHFVNSSGLRSKGVSIPLPWERNRD 700
                           K++N D      D K    VE  V+  G+     S+ LPWE    
Sbjct: 171  LN-------------KQVNVDGTDFEKDIKLESKVEAHVDK-GITYANESVRLPWEG--- 213

Query: 701  LELESVNREKWRRSNTELAEKTIPEPELRRLRNVALRMKERIKVGSLGITQALVDRIHEK 880
                    +K R+SN ELAEK IPE +L+RLRN ALRM ERIKVGS G+TQ LVD I +K
Sbjct: 214  --------DKLRKSNAELAEKLIPEAQLKRLRNAALRMVERIKVGSGGVTQELVDSIQKK 265

Query: 881  WKEDEVVKMKFEGPPVLNMKRTHEVLESKTGGLVIWRSGSTIVLYRGIAYKLPCVQTYTN 1060
            WK DE+VK++FEG P  NMKRTH++LE +TGGLVIWRSGS+IVLYRGI+YKLPCVQ++T+
Sbjct: 266  WKVDEIVKLRFEGAPSHNMKRTHDILEHRTGGLVIWRSGSSIVLYRGISYKLPCVQSFTS 325

Query: 1061 QSRANPNATHHLKDPTIDAVENVQQTDSVRTTESSGTGSVKLSNGPSDEQLMDISDHNHL 1240
            ++  + N + +   P  D+ +++         E    GS  LS     E+++D+S+ N +
Sbjct: 326  KNH-DVNESEY---PNNDSCQSLGVKCLNEAVERPRNGSTDLSG----EEIVDLSELNMI 377

Query: 1241 LDELGPRFKDWSGCNPQPVDADLLPCVIPGYTPPFRLLPFGIRHCLGNKQMTSYRRLART 1420
            LDE+GPRFKDWSG  P PVDADLLP V+PGY PPFR LP+G +  L NK+MT  RR AR 
Sbjct: 378  LDEVGPRFKDWSGRGPMPVDADLLPAVVPGYRPPFRRLPYGAKLNLKNKEMTYLRRTARI 437

Query: 1421 MPPHFALGRNRELQGLAMAMVKLWERSAIAKIAIKRGVLNTCNERMAEEIKKLTGGTLVS 1600
            MPPHFALGRNR+LQGLA AMVKLW RSAIAKIAIKRGVLNT NERMAEE+K LTGGTL+S
Sbjct: 438  MPPHFALGRNRQLQGLAAAMVKLWRRSAIAKIAIKRGVLNTSNERMAEELKVLTGGTLLS 497

Query: 1601 RNKDYIVFYRGNDFLPPLVTNVLVERQKLADLRQDEEEQARQRASALAVSNVKAAIGPLV 1780
            RNKDYIVFYRGNDFL P VT  L E ++ +D  QD+EEQARQRA+    S+ +A   PLV
Sbjct: 498  RNKDYIVFYRGNDFLSPRVTEALEEAERKSDFLQDQEEQARQRAATSIDSDTRAPKRPLV 557

Query: 1781 AGTLAETMAANSRWGNQPSGEDIEKMKRDLALSKHASLVRYLEKKLTHAQEKVKKAERAL 1960
            AGTL+ETMAA SRWGNQPS E+ EKM RD A+++HASLV+YL++KL  A+ KVKKAE  L
Sbjct: 558  AGTLSETMAATSRWGNQPSIEEREKMLRDAAVARHASLVKYLDEKLALAKGKVKKAENML 617

Query: 1961 GKVQESLNPTELPTDLETITDEERFLFRKIGLSMKPFLVLGRRGVFGGTVENMHLHWKYR 2140
             K+QE+  P+ELPTDLE ++ EERFLFRK+GLSMKPFL+LGRR VF GT+EN+HLHWKYR
Sbjct: 618  RKLQENREPSELPTDLEILSAEERFLFRKMGLSMKPFLLLGRRDVFDGTIENIHLHWKYR 677

Query: 2141 ELVKIFVKGKSFPQVKHIAISLEAESGGLLVSLDKTTKGYAIIIYRGKNYQRPQAIRPKN 2320
            ELVKI  + ++  Q+KHIAI+LEAESGGLLVS+DKTT+GYAII+YRGKNYQRP   RPKN
Sbjct: 678  ELVKIIAERRNAAQIKHIAITLEAESGGLLVSIDKTTQGYAIILYRGKNYQRPNEFRPKN 737

Query: 2321 LLTRRQALARSIELQRREALKHHISDLQDRIELLKSELDQIEIVKETGNEKLYSRLN 2491
            LLT+RQALARSIELQRREALKHHI++LQD+I+ LKSEL+  E+V+E   E L+SRL+
Sbjct: 738  LLTKRQALARSIELQRREALKHHITELQDKIQNLKSELEDTEMVEEIDEETLFSRLD 794


>ref|XP_004288953.1| PREDICTED: chloroplastic group IIA intron splicing facilitator CRS1,
            chloroplastic-like [Fragaria vesca subsp. vesca]
          Length = 933

 Score =  794 bits (2051), Expect = 0.0
 Identities = 464/921 (50%), Positives = 587/921 (63%), Gaps = 89/921 (9%)
 Frame = +2

Query: 2    SSSSSFLVFQTRENYPNSFRTLKLKTY-CSCQTIEVENE-EPQRTXXXXXXXXXXXXXXX 175
            ++SSS   F   + +  S+RT +   +  SC+T+E++ + EP +                
Sbjct: 5    TTSSSSFSFNAPQCFLPSYRTCRAHRFRVSCKTVEIKVDIEPTKKKRKPKP--------- 55

Query: 176  SFHDIVRDKWSLKIGSQRLKFPWXXXXXXXXXXXXXXXXXH----------YSQIPNSSK 325
            SF+  ++DKWS+K+ S R KFPW                            +  +     
Sbjct: 56   SFYQQIQDKWSMKVDSPRHKFPWQNQEESEDEEEDEEEKEEGESQQSEVRVFKPVDQEMS 115

Query: 326  ENMRNRVISPPWIHGSKPRKTHFDS-------------------------EIETAQNSCF 430
             +M N V   PW + +KP KT   S                         E    +N   
Sbjct: 116  FSMPNPVKYAPWANRTKPIKTQVGSIKPEVDYEHEIYKPSVANSDIDATKEFSKVENFRE 175

Query: 431  EGENFGELSEKLEDL----------------KRVADSNGK------------SEEEQEFE 526
            E +  G+L   ++++                ++  D NGK            S+EE E E
Sbjct: 176  EFDGNGKLDRDVDEVSVGFSKERKTMVSKKFEQEFDRNGKLEREIDEVFVGVSKEENEVE 235

Query: 527  GFSASSPIEF---------------VGEKE---MNFDVNGISLDEKHTGLVEHFVN---- 640
                S   E                V  KE   ++  + G ++DE  +G  E+  N    
Sbjct: 236  KMITSKSFEHRKGILEGRIDRISVGVSVKEETVVSERLIGAAVDETVSGDSENDENVVTF 295

Query: 641  -SSGLRSKGVSIPLPWERNRDLELESVNREKWRRSNTELAEKTIPEPELRRLRNVALRMK 817
             SSG  S+  S  LPWER  +L  E   + + + SNT  AE ++P+ EL+RLRNV+LRM 
Sbjct: 296  VSSGSDSRA-SARLPWEREGELVNEEGGKTRKKWSNTLSAETSLPDHELKRLRNVSLRML 354

Query: 818  ERIKVGSLGITQALVDRIHEKWKEDEVVKMKFEGPPVLNMKRTHEVLESKTGGLVIWRSG 997
            ER KVG+ GITQ+LVD IHEKWK DEVVK+KFE P  LNM+RTH +LESKTGGLVIWRSG
Sbjct: 355  ERTKVGAAGITQSLVDAIHEKWKVDEVVKLKFEEPLSLNMRRTHGILESKTGGLVIWRSG 414

Query: 998  STIVLYRGIAYKLPCVQTYTNQSRANPNATHHLKDPTIDAVENVQQTDSVRTTESSGTGS 1177
            S++VLYRGI+Y L CV++YT Q +   +    L+D                T    GT +
Sbjct: 415  SSVVLYRGISYNLQCVKSYTKQRQTGSHMLQDLED----------------TVRRDGTHN 458

Query: 1178 VKLSNGPSDEQLMDISDHNHLLDELGPRFKDWSGCNPQPVDADLLPCVIPGYTPPFRLLP 1357
                   S ++LM++SD NHLLDELGPRFKDW G  P PVDADLLP V+PGY  PFRLLP
Sbjct: 459  YM--KDLSKKELMELSDLNHLLDELGPRFKDWIGREPLPVDADLLPAVVPGYQTPFRLLP 516

Query: 1358 FGIRHCLGNKQMTSYRRLARTMPPHFALGRNRELQGLAMAMVKLWERSAIAKIAIKRGVL 1537
            +G+R  L +K MT +RRLAR  PPHFALGR++ELQGLA AMVKLWE+ AIAKIAIKRGV 
Sbjct: 517  YGVRPGLKDKDMTKFRRLARAAPPHFALGRSKELQGLAKAMVKLWEKCAIAKIAIKRGVQ 576

Query: 1538 NTCNERMAEEIKKLTGGTLVSRNKDYIVFYRGNDFLPPLVTNVLVERQKLADLRQDEEEQ 1717
            NT NERMAEE+K+LTGGTL+SRNKD+IVFYRGNDFLPP+VT VL ER+++ +L+QDEEE+
Sbjct: 577  NTRNERMAEELKRLTGGTLLSRNKDFIVFYRGNDFLPPVVTGVLKERREMRELQQDEEEK 636

Query: 1718 ARQRASALAVSNVKAAIGPLVAGTLAETMAANSRWGNQPSGEDIEKMKRDLALSKHASLV 1897
            ARQ  S    S  +A+ G LVAGTLAET+AA +RW  Q + ED++KM RD  L K ASLV
Sbjct: 637  ARQMTSDYIESRSEASNGQLVAGTLAETIAATARWIKQLTIEDVDKMTRDSNLEKRASLV 696

Query: 1898 RYLEKKLTHAQEKVKKAERALGKVQESLNPTELPTDLETITDEERFLFRKIGLSMKPFLV 2077
            RYLEKKL  A+ K+KKAE+AL KVQE+L+P +LP DLE +TDE+RFLFRKIGLSMKPFL+
Sbjct: 697  RYLEKKLALAKGKLKKAEKALAKVQENLDPADLPDDLEILTDEDRFLFRKIGLSMKPFLL 756

Query: 2078 LGRRGVFGGTVENMHLHWKYRELVKIFVKGKSFPQVKHIAISLEAESGGLLVSLDKTTKG 2257
            LGRR V+ GT+ENMHLHWK+RELVKI V+GK+F QVKHIAISLEAESGGLLVSLDKTTKG
Sbjct: 757  LGRREVYSGTIENMHLHWKHRELVKIIVRGKNFKQVKHIAISLEAESGGLLVSLDKTTKG 816

Query: 2258 YAIIIYRGKNYQRPQAIRPKNLLTRRQALARSIELQRREALKHHISDLQDRIELLKSELD 2437
            YAII+YRGKNYQ P  +RP+NLLTRRQALARSIELQRRE LKHH+SDLQ+RIELLK+EL+
Sbjct: 817  YAIILYRGKNYQCPLPLRPRNLLTRRQALARSIELQRREGLKHHLSDLQERIELLKTELE 876

Query: 2438 QIEIVKETGNEK-LYSRLNDA 2497
            ++E  +   + + L+S L+D+
Sbjct: 877  EMENGRMVDDGRTLHSSLDDS 897


>ref|XP_003550629.1| PREDICTED: chloroplastic group IIA intron splicing facilitator CRS1,
            chloroplastic-like [Glycine max]
          Length = 794

 Score =  785 bits (2027), Expect = 0.0
 Identities = 440/822 (53%), Positives = 549/822 (66%), Gaps = 3/822 (0%)
 Frame = +2

Query: 50   NSFRTLKLKTYCSCQTIEVENEEPQRTXXXXXXXXXXXXXXXSFHDIVRDKWSLKIGSQR 229
            +S   LK +  CS QT +++   PQR                SF   ++DKWSLK+GSQR
Sbjct: 19   SSLHFLKFRVSCSNQTSQLDT--PQRVKVANKTKNSSHRP--SFLHQIQDKWSLKLGSQR 74

Query: 230  LKFPWXXXXXXXXXXXXXXXXXHYSQIPNSSKENMRNRVISPPWIHGSKPRKTHFDSEIE 409
             KFPW                    QI    +E  R +     + +  KP  ++F     
Sbjct: 75   EKFPWQEQKHEVE---------QQQQIEEEKEEKKREQ-----FQNQKKPSASNFQFP-- 118

Query: 410  TAQNSCFEGENFGELSEKLEDLKRVADSNGKSEEEQEFEGFSASSPIEFVGEKEMNFDVN 589
                     +     ++ +     + DS     E++E                  N DV 
Sbjct: 119  ---------KRVSPWAQAINPSSALLDSESDDSEDEED-----------------NEDVK 152

Query: 590  GISLDEKHTGLVEHFVNSSGLRSKGVSIPLPWERNRDLELESVNRE-KWRRSNTELAEKT 766
            G +L     G V       G+ S+  S           E E VN E K RRSNTELAE+T
Sbjct: 153  GKALQHNSIGSVRE--ERKGMASEVSSN----------EAERVNGERKKRRSNTELAERT 200

Query: 767  IPEPELRRLRNVALRMKERIKVGSLGITQALVDRIHEKWKEDEVVKMKFEGPPVLNMKRT 946
            IPE ELRRLR +ALRM ER  VG  GITQ LV  +H+KW++ EVVK KF  P   +MK+ 
Sbjct: 201  IPEHELRRLRKIALRMMERFDVGVKGITQELVASVHQKWRDAEVVKFKFGIPLSAHMKKA 260

Query: 947  HEVLESKTGGLVIWRSGSTIVLYRGIAYKLPCVQTYTNQSRANPNATHHLKDPTIDAVEN 1126
            H++LESK GG+VIWRSGS+IVLYRG+AYKLPC++ Y   + A  NA  H       +   
Sbjct: 261  HQILESKIGGIVIWRSGSSIVLYRGMAYKLPCIENYKKVNLAKENAVDHSLHVGNGSDGQ 320

Query: 1127 VQQTDSVRTTESSGTGSVKLSNGPSDEQLMDISDHNHLLDELGPRFKDWSGCNPQPVDAD 1306
                ++V T ES    S +     S+E+LM++ D NHLLDELGPRFKDW+G  P PVDAD
Sbjct: 321  ASVNETVGTAESVIQESAEYLKDMSEEELMEMCDLNHLLDELGPRFKDWTGRQPLPVDAD 380

Query: 1307 LLPCVIPGYTPPFRLLPFGIRHCLGNKQMTSYRRLARTMPPHFALGRNRELQGLAMAMVK 1486
            LLP V+PGY  PFRLLP+ IR CL NK+MT++RRLART  PHFALGRNRELQGLA AMVK
Sbjct: 381  LLPAVVPGYKTPFRLLPYRIRPCLTNKEMTNFRRLARTTAPHFALGRNRELQGLARAMVK 440

Query: 1487 LWERSAIAKIAIKRGVLNTCNERMAEEIKKLTGGTLVSRNKDYIVFYRGNDFLPPLVTNV 1666
            LWE SAIAKIAIKRGV NTCN+RMAEE++KLTGGTL+SRNK+YIVFYRGNDFLPP+VTN 
Sbjct: 441  LWETSAIAKIAIKRGVPNTCNDRMAEELRKLTGGTLLSRNKEYIVFYRGNDFLPPVVTNT 500

Query: 1667 LVERQKLADLRQDEEEQARQRASALAVSNVKAAIGPLVAGTLAETMAANSRWGNQPSGED 1846
            L ERQKL  L+QDEE++ARQ AS++ VSN KAA  PL+AGTL ET AA + WG+QPS ++
Sbjct: 501  LNERQKLTLLQQDEEDKARQIASSITVSNSKAAQVPLIAGTLTETRAATTNWGHQPSKQE 560

Query: 1847 IEKMKRDLALSKHASLVRYLEKKLTHAQEKVKKAERALGKVQESLNPTELPTDLETITDE 2026
            IE M RD A++K ++LV++ EKKL  A+ K +KAE+AL KVQ  L+P ++P+DLET+T+E
Sbjct: 561  IENMIRDSAMNKLSALVKHHEKKLALAKSKFRKAEKALAKVQRDLDPADIPSDLETLTNE 620

Query: 2027 ERFLFRKIGLSMKPFLVLGRRGVFGGTVENMHLHWKYRELVKIFVKGKSFPQVKHIAISL 2206
            ERFLFRKIGLSMKP+L+LGRR V+ GT+ENMHLHWKYRELVK+ VKG++  QVKHI+ISL
Sbjct: 621  ERFLFRKIGLSMKPYLLLGRRDVYAGTIENMHLHWKYRELVKLIVKGRNSAQVKHISISL 680

Query: 2207 EAESGGLLVSLDKTTKG-YAIIIYRGKNYQRPQAIRPKNLLTRRQALARSIELQRREALK 2383
            EAESGG+LVS+DK T+G + II+YRGKNY  P+ +RPKNLLTRRQALARS+ELQRREALK
Sbjct: 681  EAESGGVLVSVDKDTRGHHTIIVYRGKNYFSPRVVRPKNLLTRRQALARSVELQRREALK 740

Query: 2384 HHISDLQDRIELLKSELDQIEIVKETGNEK-LYSRLNDAYNS 2506
            HHISDL++RI LLKSEL+ ++  KE  + K LY  L +  +S
Sbjct: 741  HHISDLEERIGLLKSELEDMKNGKEIEDSKTLYPALENPVSS 782


>ref|XP_004507937.1| PREDICTED: chloroplastic group IIA intron splicing facilitator CRS1,
            chloroplastic-like isoform X1 [Cicer arietinum]
          Length = 768

 Score =  762 bits (1968), Expect = 0.0
 Identities = 389/596 (65%), Positives = 465/596 (78%), Gaps = 1/596 (0%)
 Frame = +2

Query: 704  ELESVNREKWRRSNTELAEKTIPEPELRRLRNVALRMKERIKVGSLGITQALVDRIHEKW 883
            E ES +  K RRSN ELAE+ IPE ELRRLRN+ALRM ER  VG  GITQ LVD IHEKW
Sbjct: 154  ESESRSDLKKRRSNAELAERLIPEHELRRLRNIALRMVERFNVGVAGITQELVDSIHEKW 213

Query: 884  KEDEVVKMKFEGPPVLNMKRTHEVLESKTGGLVIWRSGSTIVLYRGIAYKLPCVQTYTNQ 1063
              DEVVK KF+ P   NMKR H++LESKTGG+V+WRSGS+IVLYRG+ YKLPCV+ YT  
Sbjct: 214  LVDEVVKFKFDSPLSANMKRAHQILESKTGGIVVWRSGSSIVLYRGMTYKLPCVELYTKV 273

Query: 1064 SRANPNATHHLKDPTIDAVENVQQTDSVRTTESSGTGSVKLSNGPSDEQLMDISDHNHLL 1243
            +    NA  H       +   V   + V   ES    + +     S+E+LM++ + NHLL
Sbjct: 274  NDIKENAVDHSVHVGSGSNAQVSVQEMVGPIESFNRNAAEYLKDMSEEELMELIELNHLL 333

Query: 1244 DELGPRFKDWSGCNPQPVDADLLPCVIPGYTPPFRLLPFGIRHCLGNKQMTSYRRLARTM 1423
            DELGPRFKDW+G  P PVDAD+LP ++PGY  PFRLLP+G++ CL NK+MT  RR+AR  
Sbjct: 334  DELGPRFKDWTGREPLPVDADMLPALVPGYKTPFRLLPYGVKPCLSNKEMTVIRRIARRT 393

Query: 1424 PPHFALGRNRELQGLAMAMVKLWERSAIAKIAIKRGVLNTCNERMAEEIKKLTGGTLVSR 1603
             PHFALGRNRELQGLA A+VKLWE SAIAKIAIKRGV  TCN+RMAEE+KKLTGGTLVSR
Sbjct: 394  APHFALGRNRELQGLARAIVKLWETSAIAKIAIKRGVPYTCNDRMAEELKKLTGGTLVSR 453

Query: 1604 NKDYIVFYRGNDFLPPLVTNVLVERQKLADLRQDEEEQARQRASALAVSNVKAAIGPLVA 1783
            NK+YIVFYRGNDFLPP VTN L ERQKL  L+QDEEE+ARQ A ++ +SN K++  PL+A
Sbjct: 454  NKEYIVFYRGNDFLPPTVTNTLTERQKLTVLQQDEEEKARQNALSITISNRKSSQMPLLA 513

Query: 1784 GTLAETMAANSRWGNQPSGEDIEKMKRDLALSKHASLVRYLEKKLTHAQEKVKKAERALG 1963
            GTLAET AA + WG+QPS ++ EKM R+  L + +SL+R  EKKL  A+ + KKAE+ L 
Sbjct: 514  GTLAETRAATTNWGHQPSKQEAEKMMRESTLDRLSSLIRNHEKKLALAKARFKKAEKDLA 573

Query: 1964 KVQESLNPTELPTDLETITDEERFLFRKIGLSMKPFLVLGRRGVFGGTVENMHLHWKYRE 2143
            K+Q  L+P +LP+DLET+T+EERFLFRKIGLSMKP+L+LGRR V+ GT+ENMHLHWKYRE
Sbjct: 574  KIQGDLDPADLPSDLETLTNEERFLFRKIGLSMKPYLLLGRRDVYAGTIENMHLHWKYRE 633

Query: 2144 LVKIFVKGKSFPQVKHIAISLEAESGGLLVSLDKTTKGYAIIIYRGKNYQRPQAIRPKNL 2323
            +VKI VKGK+  QVKHIAISLEAESGG+LVS+DK TKGY II+YRGKNY RPQ  RPK+L
Sbjct: 634  VVKIIVKGKNLAQVKHIAISLEAESGGVLVSVDKDTKGYIIILYRGKNYFRPQVTRPKSL 693

Query: 2324 LTRRQALARSIELQRREALKHHISDLQDRIELLKSELDQIEIVK-ETGNEKLYSRL 2488
            LTRRQALARSIELQRREALK+HISDLQ+ IELLKSEL+  +  K   G++ +YS L
Sbjct: 694  LTRRQALARSIELQRREALKYHISDLQEMIELLKSELEDKKNEKVNDGDKTMYSTL 749