BLASTX nr result

ID: Akebia27_contig00004619 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Akebia27_contig00004619
         (381 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_006385228.1| hypothetical protein POPTR_0003s01810g [Popu...    74   3e-11
ref|XP_006385227.1| hypothetical protein POPTR_0003s01810g [Popu...    74   3e-11
ref|XP_002531488.1| serine/arginine rich splicing factor, putati...    74   3e-11
ref|XP_007042969.1| Serine/arginine rich splicing factor, putati...    72   8e-11
ref|XP_007042967.1| Serine/arginine rich splicing factor, putati...    72   8e-11
ref|XP_002285794.1| PREDICTED: uncharacterized protein LOC100243...    66   4e-09
ref|XP_006487650.1| PREDICTED: serine/arginine-rich splicing fac...    60   4e-07
ref|XP_006423893.1| hypothetical protein CICLE_v10029102mg [Citr...    59   5e-07
ref|XP_006423892.1| hypothetical protein CICLE_v10029102mg [Citr...    59   5e-07
ref|XP_007202463.1| hypothetical protein PRUPE_ppa010124mg [Prun...    55   8e-06
ref|NP_001274830.1| serine/arginine-rich splicing factor 2-like ...    55   8e-06

>ref|XP_006385228.1| hypothetical protein POPTR_0003s01810g [Populus trichocarpa]
           gi|550342160|gb|ERP63025.1| hypothetical protein
           POPTR_0003s01810g [Populus trichocarpa]
          Length = 252

 Score = 73.6 bits (179), Expect = 3e-11
 Identities = 44/95 (46%), Positives = 47/95 (49%)
 Frame = +3

Query: 96  SRSPSVSPDYRKGRGHRRYDDERQKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGNSP 275
           SRS S SPDY +GRG  RYDDER+                                G SP
Sbjct: 159 SRSRSASPDYSRGRGRSRYDDERRSSSRSRDSLSPRRSLEPRRSFSPRKNSPVK--GESP 216

Query: 276 DKRSRDKRSPTPRSVSPPIGTAVSRSPSPHNSDSD 380
           D+RSRD  SPTPRS SP    A SRSPSP NSD D
Sbjct: 217 DRRSRDGGSPTPRSASPRGRPAASRSPSPRNSDVD 251


>ref|XP_006385227.1| hypothetical protein POPTR_0003s01810g [Populus trichocarpa]
           gi|566160340|ref|XP_006385229.1| hypothetical protein
           POPTR_0003s01810g [Populus trichocarpa]
           gi|550342159|gb|ERP63024.1| hypothetical protein
           POPTR_0003s01810g [Populus trichocarpa]
           gi|550342161|gb|ERP63026.1| hypothetical protein
           POPTR_0003s01810g [Populus trichocarpa]
          Length = 258

 Score = 73.6 bits (179), Expect = 3e-11
 Identities = 44/95 (46%), Positives = 47/95 (49%)
 Frame = +3

Query: 96  SRSPSVSPDYRKGRGHRRYDDERQKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGNSP 275
           SRS S SPDY +GRG  RYDDER+                                G SP
Sbjct: 165 SRSRSASPDYSRGRGRSRYDDERRSSSRSRDSLSPRRSLEPRRSFSPRKNSPVK--GESP 222

Query: 276 DKRSRDKRSPTPRSVSPPIGTAVSRSPSPHNSDSD 380
           D+RSRD  SPTPRS SP    A SRSPSP NSD D
Sbjct: 223 DRRSRDGGSPTPRSASPRGRPAASRSPSPRNSDVD 257


>ref|XP_002531488.1| serine/arginine rich splicing factor, putative [Ricinus communis]
           gi|223528897|gb|EEF30895.1| serine/arginine rich
           splicing factor, putative [Ricinus communis]
          Length = 257

 Score = 73.6 bits (179), Expect = 3e-11
 Identities = 44/95 (46%), Positives = 47/95 (49%)
 Frame = +3

Query: 96  SRSPSVSPDYRKGRGHRRYDDERQKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGNSP 275
           SRS S SPDY +GRG  RYDDER+                                G SP
Sbjct: 163 SRSRSASPDYSRGRGRGRYDDERRSSSRSMGSASPARRSPSPRRSRSPLKNSPPK-GASP 221

Query: 276 DKRSRDKRSPTPRSVSPPIGTAVSRSPSPHNSDSD 380
           D+RSRD RSPTPRS SP      SRSPSP NSD D
Sbjct: 222 DRRSRDGRSPTPRSASPHGRAPASRSPSPRNSDVD 256


>ref|XP_007042969.1| Serine/arginine rich splicing factor, putative isoform 3 [Theobroma
           cacao] gi|590688515|ref|XP_007042971.1| Serine/arginine
           rich splicing factor, putative isoform 3 [Theobroma
           cacao] gi|508706904|gb|EOX98800.1| Serine/arginine rich
           splicing factor, putative isoform 3 [Theobroma cacao]
           gi|508706906|gb|EOX98802.1| Serine/arginine rich
           splicing factor, putative isoform 3 [Theobroma cacao]
          Length = 257

 Score = 72.0 bits (175), Expect = 8e-11
 Identities = 43/95 (45%), Positives = 48/95 (50%)
 Frame = +3

Query: 96  SRSPSVSPDYRKGRGHRRYDDERQKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGNSP 275
           SRS S SPDY KGRG  RYDD+R+                                G SP
Sbjct: 164 SRSRSASPDYSKGRGRGRYDDDRRSSSRSMSASPARRSVSPRKSPSPRKASPPR--GGSP 221

Query: 276 DKRSRDKRSPTPRSVSPPIGTAVSRSPSPHNSDSD 380
           D+ SRD R+P+PRSVSP    A SRSPSP NSD D
Sbjct: 222 DRHSRDGRTPSPRSVSPRGRPAESRSPSPRNSDVD 256


>ref|XP_007042967.1| Serine/arginine rich splicing factor, putative isoform 1 [Theobroma
           cacao] gi|590688506|ref|XP_007042968.1| Serine/arginine
           rich splicing factor, putative isoform 1 [Theobroma
           cacao] gi|590688512|ref|XP_007042970.1| Serine/arginine
           rich splicing factor, putative isoform 1 [Theobroma
           cacao] gi|508706902|gb|EOX98798.1| Serine/arginine rich
           splicing factor, putative isoform 1 [Theobroma cacao]
           gi|508706903|gb|EOX98799.1| Serine/arginine rich
           splicing factor, putative isoform 1 [Theobroma cacao]
           gi|508706905|gb|EOX98801.1| Serine/arginine rich
           splicing factor, putative isoform 1 [Theobroma cacao]
          Length = 268

 Score = 72.0 bits (175), Expect = 8e-11
 Identities = 43/95 (45%), Positives = 48/95 (50%)
 Frame = +3

Query: 96  SRSPSVSPDYRKGRGHRRYDDERQKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGNSP 275
           SRS S SPDY KGRG  RYDD+R+                                G SP
Sbjct: 175 SRSRSASPDYSKGRGRGRYDDDRRSSSRSMSASPARRSVSPRKSPSPRKASPPR--GGSP 232

Query: 276 DKRSRDKRSPTPRSVSPPIGTAVSRSPSPHNSDSD 380
           D+ SRD R+P+PRSVSP    A SRSPSP NSD D
Sbjct: 233 DRHSRDGRTPSPRSVSPRGRPAESRSPSPRNSDVD 267


>ref|XP_002285794.1| PREDICTED: uncharacterized protein LOC100243776 [Vitis vinifera]
           gi|302141951|emb|CBI19154.3| unnamed protein product
           [Vitis vinifera]
          Length = 257

 Score = 66.2 bits (160), Expect = 4e-09
 Identities = 41/95 (43%), Positives = 47/95 (49%)
 Frame = +3

Query: 96  SRSPSVSPDYRKGRGHRRYDDERQKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGNSP 275
           SRS S SPD+ K RG  RYDDER+                                  SP
Sbjct: 163 SRSRSASPDHHKDRGRGRYDDERRSRSRSYGSASPARRSPSPRGSPSPRRTPPSRE-ESP 221

Query: 276 DKRSRDKRSPTPRSVSPPIGTAVSRSPSPHNSDSD 380
             R R++RSPTP+SVSP    A SRSPSPHNSD+D
Sbjct: 222 VGRKRNERSPTPKSVSPRGRPADSRSPSPHNSDAD 256


>ref|XP_006487650.1| PREDICTED: serine/arginine-rich splicing factor 2-like isoform X1
           [Citrus sinensis] gi|568868810|ref|XP_006487651.1|
           PREDICTED: serine/arginine-rich splicing factor 2-like
           isoform X2 [Citrus sinensis]
           gi|568868812|ref|XP_006487652.1| PREDICTED:
           serine/arginine-rich splicing factor 2-like isoform X3
           [Citrus sinensis]
          Length = 257

 Score = 59.7 bits (143), Expect = 4e-07
 Identities = 39/95 (41%), Positives = 44/95 (46%)
 Frame = +3

Query: 96  SRSPSVSPDYRKGRGHRRYDDERQKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGNSP 275
           SRS S SPDY +GRG  RYDD R+                                G S 
Sbjct: 163 SRSRSASPDYSRGRGRGRYDDYRRSPSRSVGSASPAQHSPSPGRSLSPRKNSPLR-GESS 221

Query: 276 DKRSRDKRSPTPRSVSPPIGTAVSRSPSPHNSDSD 380
           D RSR +RSP+PRS SP  G   +RS SP NSD D
Sbjct: 222 DGRSRGERSPSPRSASPRGGHGDTRSYSPGNSDVD 256


>ref|XP_006423893.1| hypothetical protein CICLE_v10029102mg [Citrus clementina]
           gi|567862480|ref|XP_006423894.1| hypothetical protein
           CICLE_v10029102mg [Citrus clementina]
           gi|567862482|ref|XP_006423895.1| hypothetical protein
           CICLE_v10029102mg [Citrus clementina]
           gi|557525827|gb|ESR37133.1| hypothetical protein
           CICLE_v10029102mg [Citrus clementina]
           gi|557525828|gb|ESR37134.1| hypothetical protein
           CICLE_v10029102mg [Citrus clementina]
           gi|557525829|gb|ESR37135.1| hypothetical protein
           CICLE_v10029102mg [Citrus clementina]
          Length = 257

 Score = 59.3 bits (142), Expect = 5e-07
 Identities = 39/95 (41%), Positives = 43/95 (45%)
 Frame = +3

Query: 96  SRSPSVSPDYRKGRGHRRYDDERQKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGNSP 275
           SRS S SPDY +GRG  RYDD R+                                G S 
Sbjct: 163 SRSRSASPDYSRGRGRGRYDDYRRSPSRSVGSASPAQHSPSPGRSLSPRKNSPLR-GESS 221

Query: 276 DKRSRDKRSPTPRSVSPPIGTAVSRSPSPHNSDSD 380
           D RSR +RSP PRS SP  G   +RS SP NSD D
Sbjct: 222 DGRSRGERSPAPRSASPRGGHGDTRSYSPGNSDVD 256


>ref|XP_006423892.1| hypothetical protein CICLE_v10029102mg [Citrus clementina]
           gi|557525826|gb|ESR37132.1| hypothetical protein
           CICLE_v10029102mg [Citrus clementina]
          Length = 202

 Score = 59.3 bits (142), Expect = 5e-07
 Identities = 39/95 (41%), Positives = 43/95 (45%)
 Frame = +3

Query: 96  SRSPSVSPDYRKGRGHRRYDDERQKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGNSP 275
           SRS S SPDY +GRG  RYDD R+                                G S 
Sbjct: 108 SRSRSASPDYSRGRGRGRYDDYRRSPSRSVGSASPAQHSPSPGRSLSPRKNSPLR-GESS 166

Query: 276 DKRSRDKRSPTPRSVSPPIGTAVSRSPSPHNSDSD 380
           D RSR +RSP PRS SP  G   +RS SP NSD D
Sbjct: 167 DGRSRGERSPAPRSASPRGGHGDTRSYSPGNSDVD 201


>ref|XP_007202463.1| hypothetical protein PRUPE_ppa010124mg [Prunus persica]
           gi|462397994|gb|EMJ03662.1| hypothetical protein
           PRUPE_ppa010124mg [Prunus persica]
          Length = 262

 Score = 55.5 bits (132), Expect = 8e-06
 Identities = 37/98 (37%), Positives = 43/98 (43%), Gaps = 3/98 (3%)
 Frame = +3

Query: 96  SRSPSVSPDYRKGRGHRRYDDERQ---KXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXG 266
           SRS S SPDY + R   RYDDER+   +                                
Sbjct: 163 SRSRSASPDYYRSRRRVRYDDERRSRSRSPIRSRSIDSVSPARRSPSPHKSPSPLIRSRS 222

Query: 267 NSPDKRSRDKRSPTPRSVSPPIGTAVSRSPSPHNSDSD 380
            +PD+RS D  SPT R VSP    A SR+PSP NSD D
Sbjct: 223 ATPDRRSHDGHSPTSRIVSPRHRLADSRTPSPRNSDVD 260


>ref|NP_001274830.1| serine/arginine-rich splicing factor 2-like [Solanum tuberosum]
           gi|78191396|gb|ABB29919.1| unknown [Solanum tuberosum]
          Length = 258

 Score = 55.5 bits (132), Expect = 8e-06
 Identities = 35/94 (37%), Positives = 43/94 (45%)
 Frame = +3

Query: 99  RSPSVSPDYRKGRGHRRYDDERQKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGNSPD 278
           RS S SPDY KGRG  +YD++R+                                  SPD
Sbjct: 165 RSRSRSPDYHKGRGRGKYDEDRRSRSRSHGRSASPARRSPSPRRSPSPRRITPPRDASPD 224

Query: 279 KRSRDKRSPTPRSVSPPIGTAVSRSPSPHNSDSD 380
            R+   RSPTP+S+SP    A SRSP P  SD+D
Sbjct: 225 GRNHKDRSPTPKSISPRGRRAGSRSPLP-RSDAD 257


Top