BLASTX nr result
ID: Akebia27_contig00004107
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Akebia27_contig00004107
(432 letters)
Database: ./nr
38,876,450 sequences; 13,856,398,315 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_006451562.1| hypothetical protein CICLE_v10009346mg [Citr... 127 1e-27
ref|XP_002279950.1| PREDICTED: 40S ribosomal protein S3-3 [Vitis... 127 2e-27
ref|XP_002514061.1| 40S ribosomal protein S3, putative [Ricinus ... 124 1e-26
ref|XP_007145342.1| hypothetical protein PHAVU_007G231200g [Phas... 124 2e-26
ref|XP_006426218.1| hypothetical protein CICLE_v10026299mg [Citr... 123 2e-26
ref|XP_006426217.1| hypothetical protein CICLE_v10026299mg [Citr... 123 2e-26
ref|XP_006854617.1| hypothetical protein AMTR_s00030p00157370 [A... 123 2e-26
ref|XP_006849631.1| hypothetical protein AMTR_s00024p00219330 [A... 123 2e-26
ref|XP_004972758.1| PREDICTED: 40S ribosomal protein S3-3-like [... 123 3e-26
ref|XP_007223203.1| hypothetical protein PRUPE_ppa009332mg [Prun... 123 3e-26
ref|XP_007202439.1| hypothetical protein PRUPE_ppa009932mg [Prun... 123 3e-26
ref|NP_001050539.1| Os03g0577000 [Oryza sativa Japonica Group] g... 123 3e-26
gb|AFW61133.1| 40S ribosomal protein S3 [Zea mays] 123 3e-26
ref|XP_002445113.1| hypothetical protein SORBIDRAFT_07g004290 [S... 123 3e-26
gb|ABR25600.1| 40S ribosomal protein S3 [Oryza sativa Indica Group] 123 3e-26
gb|ABF97261.1| 40S ribosomal protein S3, putative, expressed [Or... 123 3e-26
pdb|3J60|D Chain D, Localization Of The Small Subunit Ribosomal ... 122 7e-26
ref|XP_006659162.1| PREDICTED: 40S ribosomal protein S3-3-like [... 122 7e-26
gb|EMS48502.1| 40S ribosomal protein S3-3 [Triticum urartu] gi|4... 122 7e-26
ref|XP_004303473.1| PREDICTED: 40S ribosomal protein S3-3-like i... 122 7e-26
>ref|XP_006451562.1| hypothetical protein CICLE_v10009346mg [Citrus clementina]
gi|568875476|ref|XP_006490820.1| PREDICTED: 40S
ribosomal protein S3-3-like [Citrus sinensis]
gi|557554788|gb|ESR64802.1| hypothetical protein
CICLE_v10009346mg [Citrus clementina]
Length = 236
Score = 127 bits (320), Expect = 1e-27
Identities = 69/112 (61%), Positives = 77/112 (68%), Gaps = 27/112 (24%)
Frame = +3
Query: 3 VLRFIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYIDSAVRHVLLRQGV 182
VLRFIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYM+SSGQPVNEYIDSAVRHVLLRQGV
Sbjct: 122 VLRFIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMVSSGQPVNEYIDSAVRHVLLRQGV 181
Query: 183 LG---------------------------XXXXXXXXYIRPSMLATDIDVPV 257
LG Y++P+++ATDI+VP+
Sbjct: 182 LGIKVKIMLSWDPNGKQGPTTPLPDLVTIHSPKDEEEYVKPTLVATDIEVPI 233
>ref|XP_002279950.1| PREDICTED: 40S ribosomal protein S3-3 [Vitis vinifera]
gi|297738588|emb|CBI27833.3| unnamed protein product
[Vitis vinifera]
Length = 234
Score = 127 bits (319), Expect = 2e-27
Identities = 73/113 (64%), Positives = 74/113 (65%), Gaps = 27/113 (23%)
Frame = +3
Query: 3 VLRFIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYIDSAVRHVLLRQGV 182
VLRFIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPV EYIDSAVRHVLLRQGV
Sbjct: 122 VLRFIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVKEYIDSAVRHVLLRQGV 181
Query: 183 LG---------------------------XXXXXXXXYIRPSMLATDIDVPVA 260
LG YIRP LATDI+VP A
Sbjct: 182 LGIKVKIMLDWDPKGKQGPKTPLPDLVTIHTPKEEEEYIRPEKLATDIEVPTA 234
>ref|XP_002514061.1| 40S ribosomal protein S3, putative [Ricinus communis]
gi|223546517|gb|EEF48015.1| 40S ribosomal protein S3,
putative [Ricinus communis]
Length = 233
Score = 124 bits (311), Expect = 1e-26
Identities = 69/111 (62%), Positives = 76/111 (68%), Gaps = 25/111 (22%)
Frame = +3
Query: 3 VLRFIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYIDSAVRHVLLRQGV 182
VLRFIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPV +YIDSAVRHVLLRQGV
Sbjct: 123 VLRFIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVKDYIDSAVRHVLLRQGV 182
Query: 183 LGXXXXXXXXY-------------------------IRPSMLATDIDVPVA 260
LG + +RP +LAT+++VPVA
Sbjct: 183 LGIKVKIMLDWDPKGKQGPTTPLPDLVTIHSPKEEELRPPVLATEVEVPVA 233
>ref|XP_007145342.1| hypothetical protein PHAVU_007G231200g [Phaseolus vulgaris]
gi|543176776|gb|AGV54411.1| 40S ribosomal protein
S3-3-like protein [Phaseolus vulgaris]
gi|561018532|gb|ESW17336.1| hypothetical protein
PHAVU_007G231200g [Phaseolus vulgaris]
Length = 235
Score = 124 bits (310), Expect = 2e-26
Identities = 72/114 (63%), Positives = 77/114 (67%), Gaps = 28/114 (24%)
Frame = +3
Query: 3 VLRFIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYIDSAVRHVLLRQGV 182
VLRF+MESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPV +YIDSAVRHVLLRQGV
Sbjct: 122 VLRFVMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVKDYIDSAVRHVLLRQGV 181
Query: 183 LG---------------------------XXXXXXXXYIRPS-MLATDIDVPVA 260
LG YIRP+ +LATDI+VPVA
Sbjct: 182 LGIKVKIMLDWDPKGKQGPKTPLPDIVTIHPPKEEEEYIRPAPVLATDIEVPVA 235
>ref|XP_006426218.1| hypothetical protein CICLE_v10026299mg [Citrus clementina]
gi|557528208|gb|ESR39458.1| hypothetical protein
CICLE_v10026299mg [Citrus clementina]
Length = 263
Score = 123 bits (309), Expect = 2e-26
Identities = 62/62 (100%), Positives = 62/62 (100%)
Frame = +3
Query: 3 VLRFIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYIDSAVRHVLLRQGV 182
VLRFIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYIDSAVRHVLLRQGV
Sbjct: 153 VLRFIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYIDSAVRHVLLRQGV 212
Query: 183 LG 188
LG
Sbjct: 213 LG 214
>ref|XP_006426217.1| hypothetical protein CICLE_v10026299mg [Citrus clementina]
gi|568823917|ref|XP_006466354.1| PREDICTED: 40S
ribosomal protein S3-3-like [Citrus sinensis]
gi|557528207|gb|ESR39457.1| hypothetical protein
CICLE_v10026299mg [Citrus clementina]
Length = 232
Score = 123 bits (309), Expect = 2e-26
Identities = 62/62 (100%), Positives = 62/62 (100%)
Frame = +3
Query: 3 VLRFIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYIDSAVRHVLLRQGV 182
VLRFIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYIDSAVRHVLLRQGV
Sbjct: 122 VLRFIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYIDSAVRHVLLRQGV 181
Query: 183 LG 188
LG
Sbjct: 182 LG 183
>ref|XP_006854617.1| hypothetical protein AMTR_s00030p00157370 [Amborella trichopoda]
gi|548858303|gb|ERN16084.1| hypothetical protein
AMTR_s00030p00157370 [Amborella trichopoda]
Length = 233
Score = 123 bits (309), Expect = 2e-26
Identities = 62/62 (100%), Positives = 62/62 (100%)
Frame = +3
Query: 3 VLRFIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYIDSAVRHVLLRQGV 182
VLRFIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYIDSAVRHVLLRQGV
Sbjct: 122 VLRFIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYIDSAVRHVLLRQGV 181
Query: 183 LG 188
LG
Sbjct: 182 LG 183
>ref|XP_006849631.1| hypothetical protein AMTR_s00024p00219330 [Amborella trichopoda]
gi|548853206|gb|ERN11212.1| hypothetical protein
AMTR_s00024p00219330 [Amborella trichopoda]
Length = 233
Score = 123 bits (309), Expect = 2e-26
Identities = 62/62 (100%), Positives = 62/62 (100%)
Frame = +3
Query: 3 VLRFIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYIDSAVRHVLLRQGV 182
VLRFIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYIDSAVRHVLLRQGV
Sbjct: 122 VLRFIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYIDSAVRHVLLRQGV 181
Query: 183 LG 188
LG
Sbjct: 182 LG 183
>ref|XP_004972758.1| PREDICTED: 40S ribosomal protein S3-3-like [Setaria italica]
Length = 228
Score = 123 bits (308), Expect = 3e-26
Identities = 61/62 (98%), Positives = 62/62 (100%)
Frame = +3
Query: 3 VLRFIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYIDSAVRHVLLRQGV 182
VLRF+MESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYIDSAVRHVLLRQGV
Sbjct: 122 VLRFVMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYIDSAVRHVLLRQGV 181
Query: 183 LG 188
LG
Sbjct: 182 LG 183
>ref|XP_007223203.1| hypothetical protein PRUPE_ppa009332mg [Prunus persica]
gi|462420139|gb|EMJ24402.1| hypothetical protein
PRUPE_ppa009332mg [Prunus persica]
Length = 297
Score = 123 bits (308), Expect = 3e-26
Identities = 61/62 (98%), Positives = 62/62 (100%)
Frame = +3
Query: 3 VLRFIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYIDSAVRHVLLRQGV 182
VLRF+MESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYIDSAVRHVLLRQGV
Sbjct: 182 VLRFVMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYIDSAVRHVLLRQGV 241
Query: 183 LG 188
LG
Sbjct: 242 LG 243
>ref|XP_007202439.1| hypothetical protein PRUPE_ppa009932mg [Prunus persica]
gi|462397970|gb|EMJ03638.1| hypothetical protein
PRUPE_ppa009932mg [Prunus persica]
Length = 271
Score = 123 bits (308), Expect = 3e-26
Identities = 61/62 (98%), Positives = 62/62 (100%)
Frame = +3
Query: 3 VLRFIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYIDSAVRHVLLRQGV 182
VLRF+MESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYIDSAVRHVLLRQGV
Sbjct: 147 VLRFVMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYIDSAVRHVLLRQGV 206
Query: 183 LG 188
LG
Sbjct: 207 LG 208
>ref|NP_001050539.1| Os03g0577000 [Oryza sativa Japonica Group]
gi|38093738|gb|AAR10854.1| putative ribosomal protein
[Oryza sativa Japonica Group]
gi|108709465|gb|ABF97260.1| 40S ribosomal protein S3,
putative, expressed [Oryza sativa Japonica Group]
gi|113549010|dbj|BAF12453.1| Os03g0577000 [Oryza sativa
Japonica Group] gi|125544608|gb|EAY90747.1| hypothetical
protein OsI_12347 [Oryza sativa Indica Group]
gi|125586911|gb|EAZ27575.1| hypothetical protein
OsJ_11524 [Oryza sativa Japonica Group]
gi|215686413|dbj|BAG87698.1| unnamed protein product
[Oryza sativa Japonica Group]
gi|215708682|dbj|BAG93951.1| unnamed protein product
[Oryza sativa Japonica Group]
Length = 228
Score = 123 bits (308), Expect = 3e-26
Identities = 61/62 (98%), Positives = 62/62 (100%)
Frame = +3
Query: 3 VLRFIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYIDSAVRHVLLRQGV 182
VLRF+MESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYIDSAVRHVLLRQGV
Sbjct: 122 VLRFVMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYIDSAVRHVLLRQGV 181
Query: 183 LG 188
LG
Sbjct: 182 LG 183
>gb|AFW61133.1| 40S ribosomal protein S3 [Zea mays]
Length = 228
Score = 123 bits (308), Expect = 3e-26
Identities = 61/62 (98%), Positives = 62/62 (100%)
Frame = +3
Query: 3 VLRFIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYIDSAVRHVLLRQGV 182
VLRF+MESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYIDSAVRHVLLRQGV
Sbjct: 122 VLRFVMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYIDSAVRHVLLRQGV 181
Query: 183 LG 188
LG
Sbjct: 182 LG 183
>ref|XP_002445113.1| hypothetical protein SORBIDRAFT_07g004290 [Sorghum bicolor]
gi|241941463|gb|EES14608.1| hypothetical protein
SORBIDRAFT_07g004290 [Sorghum bicolor]
Length = 228
Score = 123 bits (308), Expect = 3e-26
Identities = 61/62 (98%), Positives = 62/62 (100%)
Frame = +3
Query: 3 VLRFIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYIDSAVRHVLLRQGV 182
VLRF+MESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYIDSAVRHVLLRQGV
Sbjct: 122 VLRFVMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYIDSAVRHVLLRQGV 181
Query: 183 LG 188
LG
Sbjct: 182 LG 183
>gb|ABR25600.1| 40S ribosomal protein S3 [Oryza sativa Indica Group]
Length = 108
Score = 123 bits (308), Expect = 3e-26
Identities = 61/62 (98%), Positives = 62/62 (100%)
Frame = +3
Query: 3 VLRFIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYIDSAVRHVLLRQGV 182
VLRF+MESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYIDSAVRHVLLRQGV
Sbjct: 2 VLRFVMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYIDSAVRHVLLRQGV 61
Query: 183 LG 188
LG
Sbjct: 62 LG 63
>gb|ABF97261.1| 40S ribosomal protein S3, putative, expressed [Oryza sativa
Japonica Group]
Length = 205
Score = 123 bits (308), Expect = 3e-26
Identities = 61/62 (98%), Positives = 62/62 (100%)
Frame = +3
Query: 3 VLRFIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYIDSAVRHVLLRQGV 182
VLRF+MESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYIDSAVRHVLLRQGV
Sbjct: 99 VLRFVMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYIDSAVRHVLLRQGV 158
Query: 183 LG 188
LG
Sbjct: 159 LG 160
>pdb|3J60|D Chain D, Localization Of The Small Subunit Ribosomal Proteins Into
A 5.5 A Cryo-em Map Of Triticum Aestivum Translating 80s
Ribosome
Length = 208
Score = 122 bits (305), Expect = 7e-26
Identities = 60/62 (96%), Positives = 62/62 (100%)
Frame = +3
Query: 3 VLRFIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYIDSAVRHVLLRQGV 182
VLRF+MESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYID+AVRHVLLRQGV
Sbjct: 111 VLRFVMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYIDAAVRHVLLRQGV 170
Query: 183 LG 188
LG
Sbjct: 171 LG 172
>ref|XP_006659162.1| PREDICTED: 40S ribosomal protein S3-3-like [Oryza brachyantha]
Length = 228
Score = 122 bits (305), Expect = 7e-26
Identities = 60/62 (96%), Positives = 62/62 (100%)
Frame = +3
Query: 3 VLRFIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYIDSAVRHVLLRQGV 182
VLRF+MESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYID+AVRHVLLRQGV
Sbjct: 122 VLRFVMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYIDAAVRHVLLRQGV 181
Query: 183 LG 188
LG
Sbjct: 182 LG 183
>gb|EMS48502.1| 40S ribosomal protein S3-3 [Triticum urartu]
gi|475625971|gb|EMT33146.1| 40S ribosomal protein S3-3
[Aegilops tauschii]
Length = 227
Score = 122 bits (305), Expect = 7e-26
Identities = 60/62 (96%), Positives = 62/62 (100%)
Frame = +3
Query: 3 VLRFIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYIDSAVRHVLLRQGV 182
VLRF+MESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYID+AVRHVLLRQGV
Sbjct: 122 VLRFVMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYIDAAVRHVLLRQGV 181
Query: 183 LG 188
LG
Sbjct: 182 LG 183
>ref|XP_004303473.1| PREDICTED: 40S ribosomal protein S3-3-like isoform 2 [Fragaria
vesca subsp. vesca]
Length = 248
Score = 122 bits (305), Expect = 7e-26
Identities = 60/62 (96%), Positives = 62/62 (100%)
Frame = +3
Query: 3 VLRFIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYIDSAVRHVLLRQGV 182
VLRF+MESGAKGCEVIVSGKLRAQRAK+MKFKDGYMISSGQPVNEYIDSAVRHVLLRQGV
Sbjct: 125 VLRFVMESGAKGCEVIVSGKLRAQRAKAMKFKDGYMISSGQPVNEYIDSAVRHVLLRQGV 184
Query: 183 LG 188
LG
Sbjct: 185 LG 186