BLASTX nr result
ID: Akebia27_contig00003594
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Akebia27_contig00003594
(419 letters)
Database: ./nr
38,876,450 sequences; 13,856,398,315 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002270117.1| PREDICTED: ribulose bisphosphate carboxylase... 106 4e-21
ref|XP_007014245.1| Ribulose bisphosphate carboxylase family pro... 96 4e-18
ref|XP_006453352.1| hypothetical protein CICLE_v10009532mg [Citr... 96 7e-18
ref|XP_006453353.1| hypothetical protein CICLE_v10009532mg [Citr... 92 1e-16
ref|XP_006344531.1| PREDICTED: ribulose bisphosphate carboxylase... 88 1e-15
ref|XP_007223576.1| hypothetical protein PRUPE_ppa012300mg [Prun... 87 2e-15
gb|EXB55399.1| hypothetical protein L484_016767 [Morus notabilis] 86 5e-15
ref|XP_004296442.1| PREDICTED: ribulose bisphosphate carboxylase... 84 2e-14
ref|XP_004243079.1| PREDICTED: ribulose bisphosphate carboxylase... 81 1e-13
ref|XP_003610096.1| Ribulose bisphosphate carboxylase small chai... 79 7e-13
ref|XP_003610095.1| Ribulose bisphosphate carboxylase small chai... 79 7e-13
gb|EYU37322.1| hypothetical protein MIMGU_mgv1a015027mg [Mimulus... 77 3e-12
ref|NP_001235868.1| uncharacterized protein LOC100527679 [Glycin... 76 6e-12
gb|AFK37376.1| unknown [Lotus japonicus] 74 2e-11
gb|AFK34410.1| unknown [Lotus japonicus] 74 3e-11
ref|XP_002531031.1| conserved hypothetical protein [Ricinus comm... 66 4e-09
ref|XP_006372084.1| hypothetical protein POPTR_0018s09880g [Popu... 65 1e-08
gb|ABK96070.1| unknown [Populus trichocarpa] 65 1e-08
ref|XP_002991566.1| hypothetical protein SELMODRAFT_186173 [Sela... 61 1e-07
ref|XP_002971729.1| hypothetical protein SELMODRAFT_147927 [Sela... 60 3e-07
>ref|XP_002270117.1| PREDICTED: ribulose bisphosphate carboxylase small chain,
chloroplastic [Vitis vinifera]
gi|297735404|emb|CBI17844.3| unnamed protein product
[Vitis vinifera]
Length = 169
Score = 106 bits (264), Expect = 4e-21
Identities = 50/66 (75%), Positives = 55/66 (83%)
Frame = -2
Query: 199 MAARMLSTPVSGFNYVGLKPMSPKLFLPKDSIEWSRKTVSNGWKTSCMKTWDPIDNKKFE 20
MAA +LS PV+ F YVGLKP PKLF KDS+ WSRKTVSNG KT CMKTW+PI+NKKFE
Sbjct: 1 MAAGILSGPVTSFGYVGLKPHQPKLFPAKDSVAWSRKTVSNGSKTHCMKTWNPINNKKFE 60
Query: 19 TLSYLP 2
TLSYLP
Sbjct: 61 TLSYLP 66
>ref|XP_007014245.1| Ribulose bisphosphate carboxylase family protein [Theobroma cacao]
gi|508784608|gb|EOY31864.1| Ribulose bisphosphate
carboxylase family protein [Theobroma cacao]
Length = 248
Score = 96.3 bits (238), Expect = 4e-18
Identities = 45/67 (67%), Positives = 53/67 (79%)
Frame = -2
Query: 202 KMAARMLSTPVSGFNYVGLKPMSPKLFLPKDSIEWSRKTVSNGWKTSCMKTWDPIDNKKF 23
KM+A + + PV+G +YVGLK PKL KDSI WSRKTVSNG +T CMKTW+P +NKKF
Sbjct: 81 KMSAGIFAAPVAGSSYVGLKTNVPKLLPAKDSIAWSRKTVSNGSRTHCMKTWNPFNNKKF 140
Query: 22 ETLSYLP 2
ETLSYLP
Sbjct: 141 ETLSYLP 147
>ref|XP_006453352.1| hypothetical protein CICLE_v10009532mg [Citrus clementina]
gi|568840482|ref|XP_006474196.1| PREDICTED: ribulose
bisphosphate carboxylase small chain, chloroplastic-like
[Citrus sinensis] gi|557556578|gb|ESR66592.1|
hypothetical protein CICLE_v10009532mg [Citrus
clementina]
Length = 201
Score = 95.5 bits (236), Expect = 7e-18
Identities = 45/68 (66%), Positives = 52/68 (76%)
Frame = -2
Query: 205 KKMAARMLSTPVSGFNYVGLKPMSPKLFLPKDSIEWSRKTVSNGWKTSCMKTWDPIDNKK 26
KKM+A + + PV+G Y+GLKP S L KDSI WS KTVSNG KT CMKTW+PI+NKK
Sbjct: 28 KKMSASIFTAPVAGSGYLGLKPTSKALLPVKDSIAWSSKTVSNGSKTRCMKTWNPINNKK 87
Query: 25 FETLSYLP 2
FE LSYLP
Sbjct: 88 FEALSYLP 95
>ref|XP_006453353.1| hypothetical protein CICLE_v10009532mg [Citrus clementina]
gi|567922696|ref|XP_006453354.1| hypothetical protein
CICLE_v10009532mg [Citrus clementina]
gi|557556579|gb|ESR66593.1| hypothetical protein
CICLE_v10009532mg [Citrus clementina]
gi|557556580|gb|ESR66594.1| hypothetical protein
CICLE_v10009532mg [Citrus clementina]
Length = 172
Score = 91.7 bits (226), Expect = 1e-16
Identities = 43/66 (65%), Positives = 50/66 (75%)
Frame = -2
Query: 199 MAARMLSTPVSGFNYVGLKPMSPKLFLPKDSIEWSRKTVSNGWKTSCMKTWDPIDNKKFE 20
M+A + + PV+G Y+GLKP S L KDSI WS KTVSNG KT CMKTW+PI+NKKFE
Sbjct: 1 MSASIFTAPVAGSGYLGLKPTSKALLPVKDSIAWSSKTVSNGSKTRCMKTWNPINNKKFE 60
Query: 19 TLSYLP 2
LSYLP
Sbjct: 61 ALSYLP 66
>ref|XP_006344531.1| PREDICTED: ribulose bisphosphate carboxylase small chain,
chloroplastic-like [Solanum tuberosum]
Length = 169
Score = 87.8 bits (216), Expect = 1e-15
Identities = 43/67 (64%), Positives = 48/67 (71%), Gaps = 1/67 (1%)
Frame = -2
Query: 199 MAARMLSTPVSGFNYVGLKPMSPKLF-LPKDSIEWSRKTVSNGWKTSCMKTWDPIDNKKF 23
M+ P+ G YVGLK S LF KD+I WSRKT+SNG KT CMKTW+PIDNKKF
Sbjct: 1 MSVSSFVAPIVGSTYVGLKSNSSNLFPAAKDTITWSRKTISNGSKTYCMKTWNPIDNKKF 60
Query: 22 ETLSYLP 2
ETLSYLP
Sbjct: 61 ETLSYLP 67
>ref|XP_007223576.1| hypothetical protein PRUPE_ppa012300mg [Prunus persica]
gi|462420512|gb|EMJ24775.1| hypothetical protein
PRUPE_ppa012300mg [Prunus persica]
Length = 175
Score = 87.4 bits (215), Expect = 2e-15
Identities = 39/66 (59%), Positives = 50/66 (75%)
Frame = -2
Query: 199 MAARMLSTPVSGFNYVGLKPMSPKLFLPKDSIEWSRKTVSNGWKTSCMKTWDPIDNKKFE 20
M++ + + PV+ YVGL PK+F KDSI W++KTVSNG +T CMK W+PI+NKKFE
Sbjct: 1 MSSAIFNAPVAASGYVGLSTNPPKIFPVKDSIGWTKKTVSNGSRTHCMKVWNPINNKKFE 60
Query: 19 TLSYLP 2
TLSYLP
Sbjct: 61 TLSYLP 66
>gb|EXB55399.1| hypothetical protein L484_016767 [Morus notabilis]
Length = 176
Score = 85.9 bits (211), Expect = 5e-15
Identities = 41/67 (61%), Positives = 50/67 (74%), Gaps = 1/67 (1%)
Frame = -2
Query: 199 MAARMLSTPVSGFNYVGLKPMSPKLFLP-KDSIEWSRKTVSNGWKTSCMKTWDPIDNKKF 23
M+A + V+G YVGLK PK +P KDS+ W+RKTVSNG K CMKTW+PI+NK+F
Sbjct: 1 MSAGTFTASVAGSGYVGLKTNFPKALVPVKDSVAWTRKTVSNGSKIHCMKTWNPINNKRF 60
Query: 22 ETLSYLP 2
ETLSYLP
Sbjct: 61 ETLSYLP 67
>ref|XP_004296442.1| PREDICTED: ribulose bisphosphate carboxylase small chain,
chloroplastic-like [Fragaria vesca subsp. vesca]
Length = 190
Score = 84.3 bits (207), Expect = 2e-14
Identities = 39/68 (57%), Positives = 50/68 (73%)
Frame = -2
Query: 205 KKMAARMLSTPVSGFNYVGLKPMSPKLFLPKDSIEWSRKTVSNGWKTSCMKTWDPIDNKK 26
+KM+A + +PV YVGL K+F KDSI W++KTVSN +T CMK+W+PI+NKK
Sbjct: 15 QKMSASIFKSPVPASGYVGLATSPSKIFPAKDSIGWTKKTVSNCSRTCCMKSWNPINNKK 74
Query: 25 FETLSYLP 2
FETLSYLP
Sbjct: 75 FETLSYLP 82
>ref|XP_004243079.1| PREDICTED: ribulose bisphosphate carboxylase small chain,
chloroplastic-like [Solanum lycopersicum]
Length = 169
Score = 81.3 bits (199), Expect = 1e-13
Identities = 39/67 (58%), Positives = 46/67 (68%), Gaps = 1/67 (1%)
Frame = -2
Query: 199 MAARMLSTPVSGFNYVGLKPMSPKLF-LPKDSIEWSRKTVSNGWKTSCMKTWDPIDNKKF 23
M+ P+ G Y+GLK F KD+I WSRKT+SNG KT CMK+W+PIDNKKF
Sbjct: 1 MSVSSFVAPIVGSTYLGLKSNRSNFFPAVKDTITWSRKTISNGSKTYCMKSWNPIDNKKF 60
Query: 22 ETLSYLP 2
ETLSYLP
Sbjct: 61 ETLSYLP 67
>ref|XP_003610096.1| Ribulose bisphosphate carboxylase small chain [Medicago truncatula]
gi|355511151|gb|AES92293.1| Ribulose bisphosphate
carboxylase small chain [Medicago truncatula]
Length = 98
Score = 79.0 bits (193), Expect = 7e-13
Identities = 40/67 (59%), Positives = 48/67 (71%), Gaps = 1/67 (1%)
Frame = -2
Query: 199 MAARMLSTPVSGFNYVGLKPMSPKLFLPKD-SIEWSRKTVSNGWKTSCMKTWDPIDNKKF 23
M+A + PV+G +VGLK S L+ SIEW +KTVSNG K CMKTW+PI+NKKF
Sbjct: 1 MSAGTFAAPVAGPGFVGLKSNSSSLWPSATYSIEWKKKTVSNGSKIHCMKTWNPINNKKF 60
Query: 22 ETLSYLP 2
ETLSYLP
Sbjct: 61 ETLSYLP 67
>ref|XP_003610095.1| Ribulose bisphosphate carboxylase small chain [Medicago truncatula]
gi|355511150|gb|AES92292.1| Ribulose bisphosphate
carboxylase small chain [Medicago truncatula]
gi|388491552|gb|AFK33842.1| unknown [Medicago
truncatula]
Length = 173
Score = 79.0 bits (193), Expect = 7e-13
Identities = 40/67 (59%), Positives = 48/67 (71%), Gaps = 1/67 (1%)
Frame = -2
Query: 199 MAARMLSTPVSGFNYVGLKPMSPKLFLPKD-SIEWSRKTVSNGWKTSCMKTWDPIDNKKF 23
M+A + PV+G +VGLK S L+ SIEW +KTVSNG K CMKTW+PI+NKKF
Sbjct: 1 MSAGTFAAPVAGPGFVGLKSNSSSLWPSATYSIEWKKKTVSNGSKIHCMKTWNPINNKKF 60
Query: 22 ETLSYLP 2
ETLSYLP
Sbjct: 61 ETLSYLP 67
>gb|EYU37322.1| hypothetical protein MIMGU_mgv1a015027mg [Mimulus guttatus]
Length = 170
Score = 76.6 bits (187), Expect = 3e-12
Identities = 33/53 (62%), Positives = 41/53 (77%)
Frame = -2
Query: 160 NYVGLKPMSPKLFLPKDSIEWSRKTVSNGWKTSCMKTWDPIDNKKFETLSYLP 2
+Y GLKP + +S+ WS+KTVSNG KT CM+TW+PI+NKKFETLSYLP
Sbjct: 14 SYTGLKPNRANVLSDNESVSWSKKTVSNGSKTYCMQTWNPINNKKFETLSYLP 66
>ref|NP_001235868.1| uncharacterized protein LOC100527679 [Glycine max]
gi|255632934|gb|ACU16821.1| unknown [Glycine max]
Length = 172
Score = 75.9 bits (185), Expect = 6e-12
Identities = 37/66 (56%), Positives = 44/66 (66%)
Frame = -2
Query: 199 MAARMLSTPVSGFNYVGLKPMSPKLFLPKDSIEWSRKTVSNGWKTSCMKTWDPIDNKKFE 20
M+A + ++G +VGLK S L I W RK VSNG KT CMKTW+PI+NKKFE
Sbjct: 1 MSAATFAAHIAGAGFVGLKSNSSNLCPSTGPIGWKRKIVSNGSKTYCMKTWNPINNKKFE 60
Query: 19 TLSYLP 2
TLSYLP
Sbjct: 61 TLSYLP 66
>gb|AFK37376.1| unknown [Lotus japonicus]
Length = 173
Score = 73.9 bits (180), Expect = 2e-11
Identities = 36/66 (54%), Positives = 44/66 (66%)
Frame = -2
Query: 199 MAARMLSTPVSGFNYVGLKPMSPKLFLPKDSIEWSRKTVSNGWKTSCMKTWDPIDNKKFE 20
M+A + V+G +VGLK S L+ EW KT SNG KT CMKTW+PI+N+KFE
Sbjct: 1 MSAGTFTALVAGAGFVGLKSNSSNLYPVTGFNEWKSKTTSNGSKTLCMKTWNPINNRKFE 60
Query: 19 TLSYLP 2
TLSYLP
Sbjct: 61 TLSYLP 66
>gb|AFK34410.1| unknown [Lotus japonicus]
Length = 173
Score = 73.6 bits (179), Expect = 3e-11
Identities = 36/66 (54%), Positives = 44/66 (66%)
Frame = -2
Query: 199 MAARMLSTPVSGFNYVGLKPMSPKLFLPKDSIEWSRKTVSNGWKTSCMKTWDPIDNKKFE 20
M+A + V+G +VGLK S L+ EW KT SNG KT CMKTW+PI+N+KFE
Sbjct: 1 MSAGTFTALVAGAGFVGLKSNSSNLYPVTGFNEWRSKTTSNGSKTLCMKTWNPINNRKFE 60
Query: 19 TLSYLP 2
TLSYLP
Sbjct: 61 TLSYLP 66
>ref|XP_002531031.1| conserved hypothetical protein [Ricinus communis]
gi|223529384|gb|EEF31348.1| conserved hypothetical
protein [Ricinus communis]
Length = 81
Score = 66.2 bits (160), Expect = 4e-09
Identities = 35/60 (58%), Positives = 42/60 (70%), Gaps = 2/60 (3%)
Frame = -2
Query: 199 MAARMLSTPVSGFNYVGLKPMSPKLFLP-KDS-IEWSRKTVSNGWKTSCMKTWDPIDNKK 26
M+A + + PV+G Y GLK S K P KDS + WSRKTVSNG KT CMKTW+PI+N K
Sbjct: 1 MSAGIFTAPVAGSGYHGLKANSTKQVFPAKDSSVAWSRKTVSNGSKTYCMKTWNPINNTK 60
>ref|XP_006372084.1| hypothetical protein POPTR_0018s09880g [Populus trichocarpa]
gi|550318425|gb|ERP49881.1| hypothetical protein
POPTR_0018s09880g [Populus trichocarpa]
Length = 231
Score = 65.1 bits (157), Expect = 1e-08
Identities = 33/61 (54%), Positives = 43/61 (70%), Gaps = 1/61 (1%)
Frame = -2
Query: 181 STPVSGFNYVGLKPMSPKL-FLPKDSIEWSRKTVSNGWKTSCMKTWDPIDNKKFETLSYL 5
++ V+ Y GL+ + K F K+S+ S +TVSNG KT CMKTW+PI+NKKFE LSYL
Sbjct: 8 ASAVAAPGYHGLRALPTKQPFATKNSVARSSRTVSNGSKTFCMKTWNPINNKKFEALSYL 67
Query: 4 P 2
P
Sbjct: 68 P 68
>gb|ABK96070.1| unknown [Populus trichocarpa]
Length = 170
Score = 65.1 bits (157), Expect = 1e-08
Identities = 33/61 (54%), Positives = 43/61 (70%), Gaps = 1/61 (1%)
Frame = -2
Query: 181 STPVSGFNYVGLKPMSPKL-FLPKDSIEWSRKTVSNGWKTSCMKTWDPIDNKKFETLSYL 5
++ V+ Y GL+ + K F K+S+ S +TVSNG KT CMKTW+PI+NKKFE LSYL
Sbjct: 8 ASAVAAPGYHGLRALPTKQPFATKNSVARSSRTVSNGSKTFCMKTWNPINNKKFEALSYL 67
Query: 4 P 2
P
Sbjct: 68 P 68
>ref|XP_002991566.1| hypothetical protein SELMODRAFT_186173 [Selaginella moellendorffii]
gi|300140599|gb|EFJ07320.1| hypothetical protein
SELMODRAFT_186173 [Selaginella moellendorffii]
Length = 178
Score = 61.2 bits (147), Expect = 1e-07
Identities = 32/63 (50%), Positives = 42/63 (66%), Gaps = 2/63 (3%)
Frame = -2
Query: 184 LSTPVSGF--NYVGLKPMSPKLFLPKDSIEWSRKTVSNGWKTSCMKTWDPIDNKKFETLS 11
LSTPV+ + GLK + L K ++WS+KTV+NG + SCM TW P +N +FETLS
Sbjct: 16 LSTPVAPKVPGFTGLKATTA-LTANKGGLQWSQKTVANGSRVSCMLTWTPYNNPRFETLS 74
Query: 10 YLP 2
YLP
Sbjct: 75 YLP 77
>ref|XP_002971729.1| hypothetical protein SELMODRAFT_147927 [Selaginella moellendorffii]
gi|300160861|gb|EFJ27478.1| hypothetical protein
SELMODRAFT_147927 [Selaginella moellendorffii]
Length = 178
Score = 60.1 bits (144), Expect = 3e-07
Identities = 31/63 (49%), Positives = 42/63 (66%), Gaps = 2/63 (3%)
Frame = -2
Query: 184 LSTPVSGF--NYVGLKPMSPKLFLPKDSIEWSRKTVSNGWKTSCMKTWDPIDNKKFETLS 11
LSTP++ + GLK + L K ++WS+KTV+NG + SCM TW P +N +FETLS
Sbjct: 16 LSTPMAPKVPGFTGLKATTA-LTANKGGLQWSQKTVANGSRVSCMLTWTPYNNPRFETLS 74
Query: 10 YLP 2
YLP
Sbjct: 75 YLP 77