BLASTX nr result
ID: Akebia27_contig00002906
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Akebia27_contig00002906 (2257 letters) Database: ./nr 38,876,450 sequences; 13,856,398,315 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_007025691.1| PAF1 complex component isoform 1 [Theobroma ... 665 0.0 ref|XP_002519028.1| RNA polymerase-associated protein RTF1, puta... 662 0.0 ref|XP_003542767.1| PREDICTED: RNA polymerase-associated protein... 652 0.0 gb|EXB82802.1| RNA polymerase-associated protein RTF1-like prote... 651 0.0 ref|XP_007159299.1| hypothetical protein PHAVU_002G226300g [Phas... 646 0.0 ref|XP_003529309.1| PREDICTED: RNA polymerase-associated protein... 644 0.0 ref|XP_004149150.1| PREDICTED: RNA polymerase-associated protein... 644 0.0 ref|XP_002316628.2| plus-3 domain-containing family protein [Pop... 639 e-180 ref|XP_007217631.1| hypothetical protein PRUPE_ppa002666mg [Prun... 639 e-180 ref|XP_004505022.1| PREDICTED: RNA polymerase-associated protein... 631 e-178 ref|XP_002305685.1| plus-3 domain-containing family protein [Pop... 627 e-177 ref|XP_006422902.1| hypothetical protein CICLE_v10028000mg [Citr... 622 e-175 ref|XP_006486980.1| PREDICTED: RNA polymerase-associated protein... 620 e-175 ref|XP_004293522.1| PREDICTED: RNA polymerase-associated protein... 618 e-174 ref|XP_006392066.1| hypothetical protein EUTSA_v10023338mg [Eutr... 579 e-162 ref|XP_006853567.1| hypothetical protein AMTR_s00032p00242160 [A... 579 e-162 ref|XP_004232840.1| PREDICTED: RNA polymerase-associated protein... 575 e-161 ref|NP_176299.1| Paf1C-like transcription factor [Arabidopsis th... 572 e-160 ref|XP_006347073.1| PREDICTED: RNA polymerase-associated protein... 572 e-160 ref|XP_006300844.1| hypothetical protein CARUB_v10019938mg [Caps... 570 e-159 >ref|XP_007025691.1| PAF1 complex component isoform 1 [Theobroma cacao] gi|590624750|ref|XP_007025692.1| PAF1 complex component isoform 1 [Theobroma cacao] gi|508781057|gb|EOY28313.1| PAF1 complex component isoform 1 [Theobroma cacao] gi|508781058|gb|EOY28314.1| PAF1 complex component isoform 1 [Theobroma cacao] Length = 660 Score = 665 bits (1716), Expect = 0.0 Identities = 374/672 (55%), Positives = 446/672 (66%), Gaps = 4/672 (0%) Frame = +3 Query: 21 MADLENLLLEAAGRTGAPGRNRHSRPPSRRQREGXXXXXXXXXXXXXXXXXAGYVNRKPS 200 MADLENLLLEAAGRTG GRNRHS PPSRR+REG GY +RKPS Sbjct: 1 MADLENLLLEAAGRTGTGGRNRHSLPPSRRRREGSYSDGGSDSRDDDSDDDHGYASRKPS 60 Query: 201 GSQVPLKKRLDPTEKXXXXXXXXXXXXXXNDD-HRXXXXXXXXXXXXLYKDDYDREQLAQ 377 GSQVPLKKRLDP E+ H LYK++ DR +LAQ Sbjct: 61 GSQVPLKKRLDPAERDDDQGSQEEGDYDDGVSVHEGDSSDESDVGDDLYKNEDDRRKLAQ 120 Query: 378 LTELQREMILSDRAQRRDDHRLKERVRAK-QSGKKTQPGKETPR-PTPXXXXXXXXXXXX 551 +TEL+RE+ILS+RA +R D + E++R+K ++ + ++ KETP P+ Sbjct: 121 MTELERELILSERADKRGDKKFTEKIRSKRENDRPSRSRKETPPLPSSRGVRSSARSADR 180 Query: 552 XXXKDDALNELRAKRMKQQDPDWKXXXXXXXXXXXXXXXXXPIRRKPTIAXXXXXXXXXX 731 KDDALNELRAKR+KQQDP+ P++RKP A Sbjct: 181 AAAKDDALNELRAKRLKQQDPEAHRKLRDASRGSSGSRGLSPVKRKPFTASSLSSSSQSD 240 Query: 732 XXXXXXXXXRNRDEDIAGNDDLGDSDVYRPID-KENLTFEDIKDITIRRSRLAKWFVEPF 908 + DE G+ + DSD R + + TF+DIK+ITIRRS+LAKWF+EPF Sbjct: 241 SESRS----NSEDEGSTGDGGMVDSDDDRGMQGPDGPTFDDIKEITIRRSKLAKWFMEPF 296 Query: 909 FEELIVGCFVRVGIGMNKTKNKSVYRLCMVRNVDATDPDRQYKLENKSTHKYLNIFWASE 1088 FEELIVGC+VRVGIG ++K+ +YRLCMVRNVDAT+P+R YKLENK+T+KYLN+ W +E Sbjct: 297 FEELIVGCYVRVGIG--RSKSGPIYRLCMVRNVDATEPERTYKLENKTTYKYLNVVWGNE 354 Query: 1089 SSAARWQMARVSDSPPLEEEFDELVREVKKIGGRMPSRYDVLEKREAIQKTITYVYSAAT 1268 SSAARWQMA +SDSPP EEEF +L+RE+++ GGRMPS+ DVLEK+EA+QK T+VYSAAT Sbjct: 355 SSAARWQMAMISDSPPQEEEFRQLIRELERSGGRMPSKQDVLEKKEALQKAKTFVYSAAT 414 Query: 1269 VKQMLQEKKSASSRPLNIAAEKDRLRRELEVAQSRRGDGAEVERIQARLQELENISRQTK 1448 VKQMLQEKKS SSRPLNIAAEKDRLRR+LE+AQS+ D AEVERI+ RLQ+LE SRQ + Sbjct: 415 VKQMLQEKKSTSSRPLNIAAEKDRLRRDLEIAQSKH-DEAEVERIKMRLQQLE-ASRQAQ 472 Query: 1449 QKDAKAVRLSEMNKRNRAENFKNASELKPVNTSLKAGEAGYDPFSRRWTRSRNYYVSSPG 1628 +KDAKAVRL+EMN++NRAENFKNASELKPVNT LKAGEAGYDPFSRRWTRSRNYYV+ P Sbjct: 473 EKDAKAVRLAEMNRKNRAENFKNASELKPVNTGLKAGEAGYDPFSRRWTRSRNYYVAKPP 532 Query: 1629 GGDEAAIATNEDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKLVDTSAPVD 1808 G D AA+A + KLVDTSAPVD Sbjct: 533 GADAAAVANGD----RIGVIASGNGNDARAAAEAGRAATVAALQEAAGAGKLVDTSAPVD 588 Query: 1809 LGTESNSLHHFELTISLTELQKNXXXXXXXXXFMARKQRIEATVGRKVPENDGRRHSLTL 1988 GTESN LH FE+ ISL LQ+ FMARKQRIEATVG +VPENDGRRH+LTL Sbjct: 589 EGTESNMLHDFEIPISLNALQRFGGPQGAVAGFMARKQRIEATVGCQVPENDGRRHALTL 648 Query: 1989 TVGDYKRRRGLL 2024 TV DYKRRRGLL Sbjct: 649 TVSDYKRRRGLL 660 >ref|XP_002519028.1| RNA polymerase-associated protein RTF1, putative [Ricinus communis] gi|223541691|gb|EEF43239.1| RNA polymerase-associated protein RTF1, putative [Ricinus communis] Length = 660 Score = 662 bits (1708), Expect = 0.0 Identities = 372/671 (55%), Positives = 447/671 (66%), Gaps = 3/671 (0%) Frame = +3 Query: 21 MADLENLLLEAAGRTGAPGRNRHSRPPSRRQREGXXXXXXXXXXXXXXXXXAGYVNRKPS 200 MADLENLLLEAAGRTG GRNR++ PPSRR+REG GY +RKPS Sbjct: 1 MADLENLLLEAAGRTGTSGRNRNALPPSRRRREGSYSDGGSDSRDDDSDDDRGYSSRKPS 60 Query: 201 GSQVPLKKRLDPTEKXXXXXXXXXXXXXX-NDDHRXXXXXXXXXXXXLYKDDYDREQLAQ 377 GSQVPLKKRLDPTE+ N D LYK++ DR +LAQ Sbjct: 61 GSQVPLKKRLDPTERDDDQGSQDEGDYDDGNSDREGDSSDGSDVGEDLYKNEDDRRKLAQ 120 Query: 378 LTELQREMILSDRAQRRDDHRLKERVRAK-QSGKKTQPGKETPR-PTPXXXXXXXXXXXX 551 ++EL+REMILS+RA ++ D L ER+R+K +S + T+ KETP P+ Sbjct: 121 MSELEREMILSERADKKGDKNLTERIRSKRESERTTRSRKETPPLPSSRGVRTSARSADR 180 Query: 552 XXXKDDALNELRAKRMKQQDPDWKXXXXXXXXXXXXXXXXXPIRRKPTIAXXXXXXXXXX 731 KDDALNEL+A+R+KQQDP+ PI+RK + Sbjct: 181 AAAKDDALNELKARRLKQQDPEAHRKLRDASRRGSGSRGFSPIKRKRFTSASLSSSSSES 240 Query: 732 XXXXXXXXXRNRDEDIAGNDDLGDSDVYRPIDKENLTFEDIKDITIRRSRLAKWFVEPFF 911 + DE G+ + DSD + TF+DI++ITIRRS+LAKWF+EP+F Sbjct: 241 ESRS-----HSEDEGSTGDGGMADSDDDGEPGSQGPTFDDIREITIRRSKLAKWFMEPWF 295 Query: 912 EELIVGCFVRVGIGMNKTKNKSVYRLCMVRNVDATDPDRQYKLENKSTHKYLNIFWASES 1091 EELIVGCFVRVGIG ++K+ +YRLC+VRNVDA DPDR YKLENK+T+KYLN+ W +ES Sbjct: 296 EELIVGCFVRVGIG--RSKSGPIYRLCLVRNVDAADPDRPYKLENKTTYKYLNVIWGNES 353 Query: 1092 SAARWQMARVSDSPPLEEEFDELVREVKKIGGRMPSRYDVLEKREAIQKTITYVYSAATV 1271 SAARWQMA +SDS P E+E+ + VREV++ GGRMP++ D+LEK+EAI+K+ T+VYSAATV Sbjct: 354 SAARWQMAMISDSAPTEDEYKQWVREVERSGGRMPTKQDILEKKEAIRKSNTFVYSAATV 413 Query: 1272 KQMLQEKKSASSRPLNIAAEKDRLRRELEVAQSRRGDGAEVERIQARLQELENISRQTKQ 1451 KQMLQEKKSASSRPLN+AAEKDRLRRELEVAQS++ D AEVERI+AR+QELE SRQT+ Sbjct: 414 KQMLQEKKSASSRPLNVAAEKDRLRRELEVAQSKQ-DDAEVERIRARIQELE-ASRQTQG 471 Query: 1452 KDAKAVRLSEMNKRNRAENFKNASELKPVNTSLKAGEAGYDPFSRRWTRSRNYYVSSPGG 1631 KDAKA+RL+EMN++NRAENF+NASELKPVNTSLKAGEAGYDPFSRRWTRSRNYYVS P G Sbjct: 472 KDAKAIRLAEMNRKNRAENFRNASELKPVNTSLKAGEAGYDPFSRRWTRSRNYYVSKPAG 531 Query: 1632 GDEAAIATNEDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKLVDTSAPVDL 1811 GD AA NE KLVDT+APVD Sbjct: 532 GDAAAATNNE--ASGTVAVANKTESAAGVSAEAGMAATAAALEAAADAGKLVDTAAPVDQ 589 Query: 1812 GTESNSLHHFELTISLTELQKNXXXXXXXXXFMARKQRIEATVGRKVPENDGRRHSLTLT 1991 GTESN+LH+FEL ISLT LQK FMARKQRIEAT+G +V END +RH LTLT Sbjct: 590 GTESNTLHNFELPISLTALQKFGGAQGAQAGFMARKQRIEATIGCRVSENDEKRHVLTLT 649 Query: 1992 VGDYKRRRGLL 2024 V DYKRRRGLL Sbjct: 650 VSDYKRRRGLL 660 >ref|XP_003542767.1| PREDICTED: RNA polymerase-associated protein RTF1 homolog [Glycine max] Length = 656 Score = 652 bits (1681), Expect = 0.0 Identities = 373/670 (55%), Positives = 435/670 (64%), Gaps = 2/670 (0%) Frame = +3 Query: 21 MADLENLLLEAAGRTGAPGRNRHSRPPSRRQREGXXXXXXXXXXXXXXXXXAGYVNRKPS 200 MADLENLLLEAAGRTG GRNRHS PPSRR+ +G Y +RKPS Sbjct: 1 MADLENLLLEAAGRTGTAGRNRHSLPPSRRRHDGAYSDGGSDSRDDDSDDELNYASRKPS 60 Query: 201 GSQVPLKKRLDPTEKXXXXXXXXXXXXXXNDDHRXXXXXXXXXXXXLYKDDYDREQLAQL 380 GSQVPLKKRLDPTE+ DH LYKD+ DR +L+++ Sbjct: 61 GSQVPLKKRLDPTERDDDLGSQEEADDDGRSDHDGDSSDESNIGDDLYKDEDDRRKLSEM 120 Query: 381 TELQREMILSDRAQRRDDHRLKERVRAK-QSGKKTQPGKETPRPTPXXXXXXXXXXXXXX 557 TELQREMILSDRA ++DD L ++ +K + GK P K++P P Sbjct: 121 TELQREMILSDRATKKDDKNLLGKIASKREKGKAAAPRKQSP-PMSSSRMRASARSADRS 179 Query: 558 XKDDALNELRAKRMKQQDPDWKXXXXXXXXXXXXXXXXXPIRRKPTIAXXXXXXXXXXXX 737 K+DALNELRAKR+KQQDP+ P R+ T Sbjct: 180 AKNDALNELRAKRLKQQDPEAHRRLREASRNAGPRHFSPPKRKTFTSTSLSSSSHSESES 239 Query: 738 XXXXXXXRNRDEDIAGNDDLGDSDVYRPI-DKENLTFEDIKDITIRRSRLAKWFVEPFFE 914 + DE G+ + DSD R + E +F+DIK+ITIRRS+LAKWF+EPFFE Sbjct: 240 RS-----HSDDEGSTGDGGIADSDDDRALAGSEGPSFQDIKEITIRRSKLAKWFMEPFFE 294 Query: 915 ELIVGCFVRVGIGMNKTKNKSVYRLCMVRNVDATDPDRQYKLENKSTHKYLNIFWASESS 1094 ELIVGCFVRVGIG +KT +YRLCMV+NVDA++PDRQYKLENK+T+KYLN+ W +ESS Sbjct: 295 ELIVGCFVRVGIGRSKTG--PIYRLCMVKNVDASEPDRQYKLENKTTYKYLNVVWGNESS 352 Query: 1095 AARWQMARVSDSPPLEEEFDELVREVKKIGGRMPSRYDVLEKREAIQKTITYVYSAATVK 1274 AARWQMA VSDS P+EEEF + V+EV GGRMPS+ DVLEK++AIQK IT+VYSAATVK Sbjct: 353 AARWQMAMVSDSAPMEEEFKQWVKEVDCSGGRMPSKQDVLEKKQAIQKAITFVYSAATVK 412 Query: 1275 QMLQEKKSASSRPLNIAAEKDRLRRELEVAQSRRGDGAEVERIQARLQELENISRQTKQK 1454 QMLQEKKSAS+RPLN+AAEKDRLRRELE+AQS+ D AEVERI+ RLQELE SRQ KQK Sbjct: 413 QMLQEKKSASTRPLNVAAEKDRLRRELEIAQSKH-DEAEVERIKTRLQELE-ASRQAKQK 470 Query: 1455 DAKAVRLSEMNKRNRAENFKNASELKPVNTSLKAGEAGYDPFSRRWTRSRNYYVSSPGGG 1634 DAKA++L+EMN++NR ENFKNASELKPVN LKAGEAGYDPFSRRWTRSRNYY + PG Sbjct: 471 DAKALKLAEMNRKNRFENFKNASELKPVNIGLKAGEAGYDPFSRRWTRSRNYYAAKPG-- 528 Query: 1635 DEAAIATNEDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKLVDTSAPVDLG 1814 E A A N + KLVDTSAPVD G Sbjct: 529 -EKAAAGN-NIVNGNVAGAGSNATGAPVTAEAGMVATAAALEAAAGAGKLVDTSAPVDQG 586 Query: 1815 TESNSLHHFELTISLTELQKNXXXXXXXXXFMARKQRIEATVGRKVPENDGRRHSLTLTV 1994 TESN LH+FEL ISL LQK FMARKQRIE+TVG +V ENDGRRH+LTLTV Sbjct: 587 TESNMLHNFELPISLALLQKYGGAPGAQAGFMARKQRIESTVGFRVSENDGRRHALTLTV 646 Query: 1995 GDYKRRRGLL 2024 DYKRRRGLL Sbjct: 647 SDYKRRRGLL 656 >gb|EXB82802.1| RNA polymerase-associated protein RTF1-like protein [Morus notabilis] Length = 658 Score = 651 bits (1680), Expect = 0.0 Identities = 376/673 (55%), Positives = 438/673 (65%), Gaps = 5/673 (0%) Frame = +3 Query: 21 MADLENLLLEAAGRTGAPGRNRHSRPPSRRQREGXXXXXXXXXXXXXXXXXAGYVNRKPS 200 MA+LENLLLEAAGRT + GRNRHS PPSRR+REG GY NRKPS Sbjct: 1 MAELENLLLEAAGRTRSAGRNRHSIPPSRRRREGSYSDGGSDSRDDDSDDDRGYANRKPS 60 Query: 201 GSQVPLKKRLDPTEKXXXXXXXXXXXXXXNDDHRXXXXXXXXXXXXLYKDDYDREQLAQL 380 GSQVPLKKRLDPTE D LYKDD DR +LA++ Sbjct: 61 GSQVPLKKRLDPTEMDDDQGSEEEGDDDRGSDREGDSESDVGSD--LYKDDDDRRKLAEM 118 Query: 381 TELQREMILSDRAQRRDDHRLKERVRAK--QSGKKTQPGKETPRPTPXXXXXXXXXXXXX 554 TELQREMIL DRA +++D LKE++R K GK TQ KETP P+ Sbjct: 119 TELQREMILLDRASKKEDKNLKEKLRPKWDNKGKATQSRKETPLPSSRVRSSARSADRAA 178 Query: 555 XXKDDALNELRAKRMKQQDPDWKXXXXXXXXXXXXXXXXXPIRRKPTIAXXXXXXXXXXX 734 KDDALNELRAKR+KQQDP+ +RK A Sbjct: 179 A-KDDALNELRAKRLKQQDPEAHGKLRDASRGGSGSRNLLHNKRKSYTATSLSSSSQSDS 237 Query: 735 XXXXXXXXRNRDEDIAGNDDLGDSDVYRPID-KENLTFEDIKDITIRRSRLAKWFVEPFF 911 ++ DE G+ + DSD R I E LTF+DIK++T+RRS+LAKW +EPFF Sbjct: 238 ESES----QSEDEGSTGDGGMIDSDDERGIPGSEGLTFDDIKEVTVRRSKLAKWLMEPFF 293 Query: 912 EELIVGCFVRVGIGMNKTKNKSVYRLCMVRNVDATDPDRQYKLENKSTHKYLNIFWASES 1091 EELIVGCFVRVGIG ++K+ +YRLCMVRNVDA++PDRQYKL+NK THKYLN+ W +E+ Sbjct: 294 EELIVGCFVRVGIG--RSKSGPIYRLCMVRNVDASEPDRQYKLDNKITHKYLNVVWGNEN 351 Query: 1092 SAARWQMARVSDSPPLEEEFDELVREVKKIGGRMPSRYDVLEKREAIQKTITYVYSAATV 1271 SAARWQMA VSDS P EEEF + VREV++ GGRMP+++D+L+K+E+I+K T+VYSAATV Sbjct: 352 SAARWQMAMVSDSVPNEEEFKQWVREVERSGGRMPTKHDILDKKESIKKINTFVYSAATV 411 Query: 1272 KQMLQEKKSASSRPLNIAAEKDRLRRELEVAQSRRGDGAEVERIQARLQELENISRQTKQ 1451 KQMLQEKKSAS+RPLNIA EKDRLRRELEVAQS + D EV+RI+ RLQELE SR+ KQ Sbjct: 412 KQMLQEKKSASARPLNIALEKDRLRRELEVAQS-KNDEVEVDRIKTRLQELE-ASRKAKQ 469 Query: 1452 KDAKAVRLSEMNKRNRAENFKNASELKPVNTSLKAGEAGYDPFSRRWTRSRNYYVSSPG- 1628 DAKA+RL+EMN++NR ENFKNASELKPVNT LKAGEAGYDPFSRRWTRSRNYYV PG Sbjct: 470 TDAKAIRLAEMNRKNRVENFKNASELKPVNTGLKAGEAGYDPFSRRWTRSRNYYVGKPGE 529 Query: 1629 -GGDEAAIATNEDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKLVDTSAPV 1805 D A A N KLVDT+APV Sbjct: 530 VKEDSGANAGNN----GASTDAENNGRHGIVAAEAGIAATEAALEAAADAGKLVDTNAPV 585 Query: 1806 DLGTESNSLHHFELTISLTELQKNXXXXXXXXXFMARKQRIEATVGRKVPENDGRRHSLT 1985 D GT SN LH+FEL ISL+ LQK FMARKQRIEATVG +VPENDGRRH+LT Sbjct: 586 DQGTVSNMLHNFELPISLSVLQKFGGPQGAQAGFMARKQRIEATVGCRVPENDGRRHALT 645 Query: 1986 LTVGDYKRRRGLL 2024 L+VGDYKRRRGLL Sbjct: 646 LSVGDYKRRRGLL 658 >ref|XP_007159299.1| hypothetical protein PHAVU_002G226300g [Phaseolus vulgaris] gi|561032714|gb|ESW31293.1| hypothetical protein PHAVU_002G226300g [Phaseolus vulgaris] Length = 654 Score = 646 bits (1667), Expect = 0.0 Identities = 372/671 (55%), Positives = 440/671 (65%), Gaps = 3/671 (0%) Frame = +3 Query: 21 MADLENLLLEAAGRTGAPGRNRHSRPPSRRQREGXXXXXXXXXXXXXXXXXAGYVNRKPS 200 MADLENLLLEAAGRTG GRNRHS PPSRR+ +G Y +RKPS Sbjct: 1 MADLENLLLEAAGRTGTSGRNRHSLPPSRRRHDGAYSDGGSDSRDDDSDDELNYASRKPS 60 Query: 201 GSQVPLKKRLDPTEKXXXXXXXXXXXXXX-NDDHRXXXXXXXXXXXXLYKDDYDREQLAQ 377 GSQVPLKKRLDP+E+ + DH LYKD+ DR +L++ Sbjct: 61 GSQVPLKKRLDPSERDDDLGSQEEADDDDGHSDHDGDSSDESNIGDDLYKDEDDRRKLSE 120 Query: 378 LTELQREMILSDRAQRRDDHRLKERVRAK-QSGKKTQPGKETPRPTPXXXXXXXXXXXXX 554 +TELQREMILSDRA ++DD L ++ +K + GK + P K++P P Sbjct: 121 MTELQREMILSDRATKKDDKNLLGKIASKREKGKVSVPRKQSP-PMSSSRMRASARSADR 179 Query: 555 XXKDDALNELRAKRMKQQDPDWKXXXXXXXXXXXXXXXXXPIRRKPTIAXXXXXXXXXXX 734 K+DALNELRAKR+KQQDP+ P +RKP + Sbjct: 180 SAKNDALNELRAKRLKQQDPEAHRKLREASRNAGPRHFSPP-KRKPFTSTSLSSSSHSES 238 Query: 735 XXXXXXXXRNRDEDIAGNDDLGDSDVYRPID-KENLTFEDIKDITIRRSRLAKWFVEPFF 911 + DE G+ +GDSD R + E +F+DIK+ITIRRS+LAKWF+EPFF Sbjct: 239 ESRS----HSDDEGSTGDGGIGDSDDDRALTGSEGPSFQDIKEITIRRSKLAKWFMEPFF 294 Query: 912 EELIVGCFVRVGIGMNKTKNKSVYRLCMVRNVDATDPDRQYKLENKSTHKYLNIFWASES 1091 EELIVGCFVRVGIG +KT +YRLCMV+NVDA++PDRQYKLENK+T+KYLN+ W +ES Sbjct: 295 EELIVGCFVRVGIGRSKTG--PIYRLCMVKNVDASEPDRQYKLENKTTYKYLNVVWGNES 352 Query: 1092 SAARWQMARVSDSPPLEEEFDELVREVKKIGGRMPSRYDVLEKREAIQKTITYVYSAATV 1271 SAARWQMA VSDS PLEEEF + V+EV + GGRMP++ DVLEK++AIQK IT+VYSAATV Sbjct: 353 SAARWQMAMVSDSAPLEEEFKQWVKEVDRSGGRMPTKQDVLEKKQAIQKAITFVYSAATV 412 Query: 1272 KQMLQEKKSASSRPLNIAAEKDRLRRELEVAQSRRGDGAEVERIQARLQELENISRQTKQ 1451 KQMLQEKKSAS+RPLN+AAEKDRLRRELE+AQS+ D AEV+RI+ARLQELE SR KQ Sbjct: 413 KQMLQEKKSASTRPLNVAAEKDRLRRELEIAQSKH-DEAEVDRIKARLQELE-ASRHAKQ 470 Query: 1452 KDAKAVRLSEMNKRNRAENFKNASELKPVNTSLKAGEAGYDPFSRRWTRSRNYYVSSPGG 1631 KDAKA++L+EMN++NR ENFKNASELKPVNT LKAGEAGYDPFSRRWTRSRNYY Sbjct: 471 KDAKALKLAEMNRKNRFENFKNASELKPVNTGLKAGEAGYDPFSRRWTRSRNYYT----- 525 Query: 1632 GDEAAIATNEDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKLVDTSAPVDL 1811 G++AA N KLVDTSAPVD Sbjct: 526 GEKAAAGNNS--VNGIVAGPGTNSTGAPVTAEAGLVATAAALEAAADAGKLVDTSAPVDQ 583 Query: 1812 GTESNSLHHFELTISLTELQKNXXXXXXXXXFMARKQRIEATVGRKVPENDGRRHSLTLT 1991 GTESN LH+FEL ISL LQK FMARKQRIE+TVG +V ENDGRRHSLTL+ Sbjct: 584 GTESNMLHNFELPISLALLQKYGGAQGAQAGFMARKQRIESTVGFRVLENDGRRHSLTLS 643 Query: 1992 VGDYKRRRGLL 2024 V DYKRRRGLL Sbjct: 644 VSDYKRRRGLL 654 >ref|XP_003529309.1| PREDICTED: RNA polymerase-associated protein RTF1 homolog isoform X1 [Glycine max] gi|571466984|ref|XP_006583809.1| PREDICTED: RNA polymerase-associated protein RTF1 homolog isoform X2 [Glycine max] Length = 656 Score = 644 bits (1661), Expect = 0.0 Identities = 370/670 (55%), Positives = 436/670 (65%), Gaps = 2/670 (0%) Frame = +3 Query: 21 MADLENLLLEAAGRTGAPGRNRHSRPPSRRQREGXXXXXXXXXXXXXXXXXAGYVNRKPS 200 MADLENLLLEAAGRTG GRNRHS P SRR+ +G Y +RKPS Sbjct: 1 MADLENLLLEAAGRTGTAGRNRHSLPSSRRRHDGAYSDGGSDSRDEDSDDELNYASRKPS 60 Query: 201 GSQVPLKKRLDPTEKXXXXXXXXXXXXXXNDDHRXXXXXXXXXXXXLYKDDYDREQLAQL 380 GSQVPLKKRLDPTE+ D LYKD+ DR +L+++ Sbjct: 61 GSQVPLKKRLDPTERDDDLGSQEEADDDGRSDCDGDSSDESNIGDDLYKDEDDRRKLSEM 120 Query: 381 TELQREMILSDRAQRRDDHRLKERVRAK-QSGKKTQPGKETPRPTPXXXXXXXXXXXXXX 557 TELQREMILSDRA ++DD L ++ +K + GK P K++P P Sbjct: 121 TELQREMILSDRATKKDDKNLLGKIASKREKGKVAVPRKQSP-PMSSSRMRASARSADRS 179 Query: 558 XKDDALNELRAKRMKQQDPDWKXXXXXXXXXXXXXXXXXPIRRKPTIAXXXXXXXXXXXX 737 K+DALNELRAKR+KQQDP+ P +RKP + Sbjct: 180 AKNDALNELRAKRLKQQDPEAHRRLREASRNAGSRHFSPP-KRKPFTSTSLSSSSHSESE 238 Query: 738 XXXXXXXRNRDEDIAGNDDLGDSDVYRPI-DKENLTFEDIKDITIRRSRLAKWFVEPFFE 914 + DE G+ + DSD R + E +F+D+K+ITIRRS+LAKWF+EPFFE Sbjct: 239 SRS----HSDDEGSTGDGGIVDSDDDRALAGSEGPSFQDVKEITIRRSKLAKWFMEPFFE 294 Query: 915 ELIVGCFVRVGIGMNKTKNKSVYRLCMVRNVDATDPDRQYKLENKSTHKYLNIFWASESS 1094 ELIVGCFVRVGIG +KT +YRLCMV+NVDA++PDRQYKLENK+T+KYLN+ W +ESS Sbjct: 295 ELIVGCFVRVGIGRSKTG--PIYRLCMVKNVDASEPDRQYKLENKTTYKYLNVVWGNESS 352 Query: 1095 AARWQMARVSDSPPLEEEFDELVREVKKIGGRMPSRYDVLEKREAIQKTITYVYSAATVK 1274 AARWQMA VSDS PLEEEF + V+EV + GGRMPS+ DVLEK++AIQK IT+VYSAATVK Sbjct: 353 AARWQMAMVSDSAPLEEEFKQWVKEVDRSGGRMPSKQDVLEKKQAIQKAITFVYSAATVK 412 Query: 1275 QMLQEKKSASSRPLNIAAEKDRLRRELEVAQSRRGDGAEVERIQARLQELENISRQTKQK 1454 QMLQEKKSAS+RPLN+AAEKDRLRRELE+AQS+ D AEVERI+ RL ELE SRQ KQK Sbjct: 413 QMLQEKKSASTRPLNVAAEKDRLRRELEIAQSKY-DEAEVERIKTRLLELE-ASRQAKQK 470 Query: 1455 DAKAVRLSEMNKRNRAENFKNASELKPVNTSLKAGEAGYDPFSRRWTRSRNYYVSSPGGG 1634 DAKA++L+EMN++NR ENFKNASE+KPVNT LKAGEAGYDPFSRRWTRSRNYY + P G Sbjct: 471 DAKALKLAEMNRKNRFENFKNASEMKPVNTGLKAGEAGYDPFSRRWTRSRNYYAAKP--G 528 Query: 1635 DEAAIATNEDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKLVDTSAPVDLG 1814 ++AA N KLVDTSAPVD G Sbjct: 529 EKAAAGNNS--VNGNVAGAGSNGTGAPVTAEAGMVATAAALEAAAGAGKLVDTSAPVDQG 586 Query: 1815 TESNSLHHFELTISLTELQKNXXXXXXXXXFMARKQRIEATVGRKVPENDGRRHSLTLTV 1994 TESN LH+FEL ISL LQK FMARKQ+IEATVG +V ENDGRRH+LTLTV Sbjct: 587 TESNMLHNFELPISLALLQKFGGAQGAQAGFMARKQKIEATVGFRVSENDGRRHALTLTV 646 Query: 1995 GDYKRRRGLL 2024 DYKRRRGLL Sbjct: 647 SDYKRRRGLL 656 >ref|XP_004149150.1| PREDICTED: RNA polymerase-associated protein RTF1 homolog [Cucumis sativus] gi|449517636|ref|XP_004165851.1| PREDICTED: RNA polymerase-associated protein RTF1 homolog [Cucumis sativus] Length = 660 Score = 644 bits (1660), Expect = 0.0 Identities = 370/671 (55%), Positives = 435/671 (64%), Gaps = 3/671 (0%) Frame = +3 Query: 21 MADLENLLLEAAGRTGAPGRNRHSRPPSRRQREGXXXXXXXXXXXXXXXXXAGYVNRKPS 200 MADLENLLLEAAGRT A GRNRHS PPSRRQREG GY +RKPS Sbjct: 1 MADLENLLLEAAGRTNAAGRNRHSHPPSRRQREGSYSDAGSDSRDDDSDDDRGYASRKPS 60 Query: 201 GSQVPLKKRLDPTEKXXXXXXXXXXXXXX-NDDHRXXXXXXXXXXXXLYKDDYDREQLAQ 377 GSQVPLKKRLDPTE+ + LYKDD DR +LA Sbjct: 61 GSQVPLKKRLDPTERDDDGGSQEEGEDEDVGSEREGDSSDESDVGDDLYKDDDDRRKLAG 120 Query: 378 LTELQREMILSDRAQRRDDHRLKERVRAKQSGKKTQPG-KETPRPTPXXXXXXXXXXXXX 554 ++ELQREMILSDRA +++D L E +RAK K+ P KETP Sbjct: 121 MSELQREMILSDRASKKNDKHLYESLRAKMDKGKSAPSRKETPPLPSSRIRSSARSADRA 180 Query: 555 XXKDDALNELRAKRMKQQDPDWKXXXXXXXXXXXXXXXXXPIRRKPTIAXXXXXXXXXXX 734 KDDALNELRAKR+KQQDP+ P +RKP A Sbjct: 181 AAKDDALNELRAKRLKQQDPEAHRKLRDASRGNANSRRFSPTKRKPFTAPSLSSSSQSES 240 Query: 735 XXXXXXXXRNRDEDIAGNDDLGDSDVYRPID-KENLTFEDIKDITIRRSRLAKWFVEPFF 911 ++ DE G+ + DSD R I + TFEDIK++TIRRS+LAKW +EPFF Sbjct: 241 ESRF----QSDDEGSTGDGGMIDSDDERSIPGSDGPTFEDIKEVTIRRSKLAKWLMEPFF 296 Query: 912 EELIVGCFVRVGIGMNKTKNKSVYRLCMVRNVDATDPDRQYKLENKSTHKYLNIFWASES 1091 EELIVGCFVRVGIG ++++ +YRLC+VRNVDAT+PDRQYKLENK THKYLN+ W +E+ Sbjct: 297 EELIVGCFVRVGIG--RSRSGPIYRLCLVRNVDATEPDRQYKLENKITHKYLNVIWGNEA 354 Query: 1092 SAARWQMARVSDSPPLEEEFDELVREVKKIGGRMPSRYDVLEKREAIQKTITYVYSAATV 1271 SAARWQMA VSDS PLE+E+ + V+EV++ GGRM S+ D+LEK+EAIQK +VYSAATV Sbjct: 355 SAARWQMAMVSDSAPLEDEYKQWVKEVERTGGRMLSKQDILEKKEAIQKVNNFVYSAATV 414 Query: 1272 KQMLQEKKSASSRPLNIAAEKDRLRRELEVAQSRRGDGAEVERIQARLQELENISRQTKQ 1451 KQMLQ+KKSAS+RPLNIAAEKDRLRRE++VA S + D AEVERI+ RLQ+LE SR+ + Sbjct: 415 KQMLQDKKSASARPLNIAAEKDRLRREMDVAVS-KNDEAEVERIKTRLQQLE-ASRRLQM 472 Query: 1452 KDAKAVRLSEMNKRNRAENFKNASELKPVNTSLKAGEAGYDPFSRRWTRSRNYYVSSPGG 1631 KDAKA+RL+EMN++NR ENFKNASEL+P+ LKAGEAGYDPFSRRWTRSRNYYVS+ G Sbjct: 473 KDAKAIRLAEMNRKNRVENFKNASELRPLK-DLKAGEAGYDPFSRRWTRSRNYYVSNAGE 531 Query: 1632 GDEAAIATNEDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKLVDTSAPVDL 1811 + AA A KLVDT+APVD Sbjct: 532 ANGAAEAAGNS--DNVTPALENTRTEAGGTSDAGMAATAAALEAAAGAGKLVDTNAPVDG 589 Query: 1812 GTESNSLHHFELTISLTELQKNXXXXXXXXXFMARKQRIEATVGRKVPENDGRRHSLTLT 1991 GTESNSLH+FEL ISL LQK F+ARKQRIEATVGR+VPENDGRRH+LTLT Sbjct: 590 GTESNSLHNFELPISLAMLQKFGGALGAQAGFLARKQRIEATVGRQVPENDGRRHALTLT 649 Query: 1992 VGDYKRRRGLL 2024 V DYKRRRGLL Sbjct: 650 VSDYKRRRGLL 660 >ref|XP_002316628.2| plus-3 domain-containing family protein [Populus trichocarpa] gi|550327599|gb|EEE97240.2| plus-3 domain-containing family protein [Populus trichocarpa] Length = 664 Score = 639 bits (1649), Expect = e-180 Identities = 363/672 (54%), Positives = 437/672 (65%), Gaps = 4/672 (0%) Frame = +3 Query: 21 MADLENLLLEAAGRTGAPGRNRHSRPPSRRQR-EGXXXXXXXXXXXXXXXXXAGYVNRKP 197 MADLENLLLEAAGRTG GRNR+S PPSRR++ EG GY +RKP Sbjct: 1 MADLENLLLEAAGRTGKSGRNRNSLPPSRRRKQEGSYSDGGSDSRDDGSDDDRGYASRKP 60 Query: 198 SGSQVPLKKRLDPTEKXXXXXXXXXXXXXXN-DDHRXXXXXXXXXXXXLYKDDYDREQLA 374 SGSQVPLKKRL+ E+ D LYKD+ DR++LA Sbjct: 61 SGSQVPLKKRLETNERDDEGGSQEEGDYDDGGSDREGESSDGSDIGDDLYKDEDDRQKLA 120 Query: 375 QLTELQREMILSDRAQRRDDHRLKERVRAKQSGKK-TQPGKETPR-PTPXXXXXXXXXXX 548 Q++EL RE+IL+DRA ++ D L E++R+K+ K T+ KETP P+ Sbjct: 121 QMSELDRELILADRADKKGDKHLTEKIRSKRDNDKPTRSRKETPPLPSSRGVRSSARSAD 180 Query: 549 XXXXKDDALNELRAKRMKQQDPDWKXXXXXXXXXXXXXXXXXPIRRKPTIAXXXXXXXXX 728 KDDALNELRAKR+KQQDP+ +++ + Sbjct: 181 RAAAKDDALNELRAKRLKQQDPEAHRKLRDASRGSAGSRGFAQVKKNNFTSARLSSSSSE 240 Query: 729 XXXXXXXXXXRNRDEDIAGNDDLGDSDVYRPIDKENLTFEDIKDITIRRSRLAKWFVEPF 908 + DE G+ + DSD T+EDIK+ITIRR++LAKWF+EP+ Sbjct: 241 SESGSRS---HSEDEGSTGDGGMADSDEDGDPGSRGPTYEDIKEITIRRTKLAKWFMEPW 297 Query: 909 FEELIVGCFVRVGIGMNKTKNKSVYRLCMVRNVDATDPDRQYKLENKSTHKYLNIFWASE 1088 FEELI+GCFVRVGIG +KT VYRLCMVRNVDA +PD+ YKLENKST+KYLN+ W ++ Sbjct: 298 FEELIIGCFVRVGIGRSKTG--PVYRLCMVRNVDAAEPDKPYKLENKSTYKYLNVTWGAD 355 Query: 1089 SSAARWQMARVSDSPPLEEEFDELVREVKKIGGRMPSRYDVLEKREAIQKTITYVYSAAT 1268 SSAARWQMA VSDS P EEE+ + VRE ++ GGR+PS+ D+LEK+EAI+K+ T+VYSAAT Sbjct: 356 SSAARWQMAMVSDSAPTEEEYKQWVREAERGGGRLPSKQDILEKKEAIRKSNTFVYSAAT 415 Query: 1269 VKQMLQEKKSASSRPLNIAAEKDRLRRELEVAQSRRGDGAEVERIQARLQELENISRQTK 1448 VKQMLQEKKSASSRPLN+AAEKDRLRRELE+AQSR D AEVERI+AR+ ELE SRQ K Sbjct: 416 VKQMLQEKKSASSRPLNVAAEKDRLRRELEIAQSRH-DEAEVERIEARILELE-ASRQAK 473 Query: 1449 QKDAKAVRLSEMNKRNRAENFKNASELKPVNTSLKAGEAGYDPFSRRWTRSRNYYVSSPG 1628 KDAKA+RL+EMN++NR ENF+NASELKP+NT LKAGEAGYDPFSRRWTRSRNYYVS+P Sbjct: 474 VKDAKALRLAEMNRKNRVENFRNASELKPINTGLKAGEAGYDPFSRRWTRSRNYYVSNPA 533 Query: 1629 GGDEAAIATNEDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKLVDTSAPVD 1808 GGD+A A+N + KLVDTSAPVD Sbjct: 534 GGDDAVAASNSEANDTAAVADSDHVVAGAMSESGVAATAAALDAAADAG-KLVDTSAPVD 592 Query: 1809 LGTESNSLHHFELTISLTELQKNXXXXXXXXXFMARKQRIEATVGRKVPENDGRRHSLTL 1988 GTESN++H+FEL ISL LQK FMARKQRIEA VG +V ENDGRRH+LTL Sbjct: 593 QGTESNTMHNFELEISLIALQKFRGPQGAHAGFMARKQRIEANVGCQVRENDGRRHALTL 652 Query: 1989 TVGDYKRRRGLL 2024 TVGDYKRRRGLL Sbjct: 653 TVGDYKRRRGLL 664 >ref|XP_007217631.1| hypothetical protein PRUPE_ppa002666mg [Prunus persica] gi|462413781|gb|EMJ18830.1| hypothetical protein PRUPE_ppa002666mg [Prunus persica] Length = 646 Score = 639 bits (1647), Expect = e-180 Identities = 366/670 (54%), Positives = 430/670 (64%), Gaps = 2/670 (0%) Frame = +3 Query: 21 MADLENLLLEAAGRTGAPGRNRHSRPPSRRQREGXXXXXXXXXXXXXXXXXAGYVNRKPS 200 MADLENLLLEAAGRT + G++RHS SRR+R G GY +RKPS Sbjct: 1 MADLENLLLEAAGRTSSAGKSRHSHSSSRRRRGGSYSDGGSDSRGDDSDDGRGYASRKPS 60 Query: 201 GSQVPLKKRLDPTEKXXXXXXXXXXXXXXNDDHRXXXXXXXXXXXXLYKDDYDREQLAQL 380 G+QVPLKKRLDPTE + R LYKD+ DR +LA++ Sbjct: 61 GTQVPLKKRLDPTEMDDEQGSQEEGDYNDSGSDRGGDSNESDVGSDLYKDEDDRRKLAEM 120 Query: 381 TELQREMILSDRAQRRDDHRLKERVRAKQSGKKTQPGKETPRPTPXXXXXXXXXXXXXXX 560 +ELQRE+ILSDRAQ++DD LKE+ R P KETP Sbjct: 121 SELQRELILSDRAQKKDDKSLKEKFR---------PKKETPPLPSSRVRSSARSADRAAA 171 Query: 561 KDDALNELRAKRMKQQDPDWKXXXXXXXXXXXXXXXXXPIRRKPTIAXXXXXXXXXXXXX 740 KDDALNELRAKR+KQQDP+ + RK A Sbjct: 172 KDDALNELRAKRLKQQDPEAHRKLRDASRGSSGSRSFSHMTRKSFTAVGRSSSSQSDSDS 231 Query: 741 XXXXXXRNRDEDIAGNDDLGDSDVYRPIDKENLTFEDIKDITIRRSRLAKWFVEPFFEEL 920 + D+ G D + DSD R E LTF+DIK+ITIRRS+LAKW +EPFFEEL Sbjct: 232 RS----HSEDDGSTGEDPMMDSDDER---SEGLTFDDIKEITIRRSKLAKWLMEPFFEEL 284 Query: 921 IVGCFVRVGIGMNKTKNKSVYRLCMVRNVDATDPDRQYKLENKSTHKYLNIFWASESSAA 1100 IVGCFVRVGIG ++K+ +YRLCMVRNVDA+DPDR+YKLENK+THKYLN+ W +E+SAA Sbjct: 285 IVGCFVRVGIG--RSKSGPIYRLCMVRNVDASDPDRKYKLENKTTHKYLNVVWGNENSAA 342 Query: 1101 RWQMARVSDSPPLEEEFDELVREVKKIGGRMPSRYDVLEKREAIQKTITYVYSAATVKQM 1280 RWQMA +SDS PLEEEF + VREV++ GGR+PS+ DVLEK+EAI+K T+VYSAATVKQM Sbjct: 343 RWQMAMISDSAPLEEEFKQWVREVERSGGRLPSKQDVLEKKEAIKKINTFVYSAATVKQM 402 Query: 1281 LQEKKSASSRPLNIAAEKDRLRRELEVAQSRRGDGAEVERIQARLQELENISRQTKQKDA 1460 ++EKKSASSRPLNIA EKDRLRRELEVAQS+ D AEVERI+ RLQ+LE RQ++ KD+ Sbjct: 403 IEEKKSASSRPLNIALEKDRLRRELEVAQSKH-DDAEVERIKTRLQQLE-ARRQSQGKDS 460 Query: 1461 KAVRLSEMNKRNRAENFKNASELKPVNTSLKAGEAGYDPFSRRWTRSRNYYVSSPG--GG 1634 KAVRL+EMN++NR ENFKNASELKPV T LKAGEAGYDPFSRRWTRSRNYYVS PG G Sbjct: 461 KAVRLAEMNRKNRVENFKNASELKPVKTGLKAGEAGYDPFSRRWTRSRNYYVSKPGEQKG 520 Query: 1635 DEAAIATNEDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKLVDTSAPVDLG 1814 + AI + KL+DTSAPVD G Sbjct: 521 EAEAIVDAD----GALADIESNGTAVVGAVRAGMAATAAALEAAAGAGKLIDTSAPVDFG 576 Query: 1815 TESNSLHHFELTISLTELQKNXXXXXXXXXFMARKQRIEATVGRKVPENDGRRHSLTLTV 1994 TESN +H+FEL ISL LQK F+ARKQRIEATVG +VPENDGRRH+LTLTV Sbjct: 577 TESNLMHNFELPISLATLQKFGGPQGAQEGFLARKQRIEATVGCRVPENDGRRHALTLTV 636 Query: 1995 GDYKRRRGLL 2024 DYKRR GLL Sbjct: 637 SDYKRRMGLL 646 >ref|XP_004505022.1| PREDICTED: RNA polymerase-associated protein RTF1 homolog isoform X1 [Cicer arietinum] gi|502142571|ref|XP_004505023.1| PREDICTED: RNA polymerase-associated protein RTF1 homolog isoform X2 [Cicer arietinum] Length = 658 Score = 631 bits (1628), Expect = e-178 Identities = 364/672 (54%), Positives = 434/672 (64%), Gaps = 4/672 (0%) Frame = +3 Query: 21 MADLENLLLEAAGRTG-APGRNRHSRPPSRRQREGXXXXXXXXXXXXXXXXXAGYVNRKP 197 MADLENLLLEAAGRTG A GRNRHS PPSRR+R+G Y +RKP Sbjct: 1 MADLENLLLEAAGRTGGAAGRNRHSIPPSRRRRDGSYSDGGSDSRDDDSDDELNYPSRKP 60 Query: 198 SGSQVPLKKRLDPTEKXXXXXXXXXXXXXXN-DDHRXXXXXXXXXXXXLYKDDYDREQLA 374 SGSQVPLKKRLDPTE+ D LYKD+ DR +L+ Sbjct: 61 SGSQVPLKKRLDPTERDDDLGSQEEADDDDGRSDREGDSSDESNIGDDLYKDEDDRRKLS 120 Query: 375 QLTELQREMILSDRAQRRDDHRLKERVRAK-QSGKKTQPGKETPRPTPXXXXXXXXXXXX 551 +++ELQREMILSDRA ++DD L ++ +K + GK GK++P P Sbjct: 121 EMSELQREMILSDRASKKDDKSLLGKIASKREKGKAIMTGKQSP-PLSSSRMRASARSAD 179 Query: 552 XXXKDDALNELRAKRMKQQDPDWKXXXXXXXXXXXXXXXXXPIRRKPTIAXXXXXXXXXX 731 K+ ALNELRAKR+KQQDP+ + P R+ T A Sbjct: 180 RSAKNVALNELRAKRLKQQDPEARRRLREASRNSGPRRFSPPKRKSFTSANLSSSSHSDS 239 Query: 732 XXXXXXXXXRNRDEDIAGNDDLGDSDVYRPID-KENLTFEDIKDITIRRSRLAKWFVEPF 908 + DE G+ + DSD R + E +F+DIK+ITIRRS+LAKWF+EPF Sbjct: 240 DSRS-----HSDDEGSTGDGGIADSDDDRALSGSEGPSFQDIKEITIRRSKLAKWFMEPF 294 Query: 909 FEELIVGCFVRVGIGMNKTKNKSVYRLCMVRNVDATDPDRQYKLENKSTHKYLNIFWASE 1088 FEELIVGCFVRVGIG +KT +YRLCMV+NVD++DPDRQYKLEN++THKYLN+ W +E Sbjct: 295 FEELIVGCFVRVGIGRSKTG--PIYRLCMVKNVDSSDPDRQYKLENRTTHKYLNVVWGNE 352 Query: 1089 SSAARWQMARVSDSPPLEEEFDELVREVKKIGGRMPSRYDVLEKREAIQKTITYVYSAAT 1268 SSAARWQMA VSDS PLEEEF + V+EV++ GGRMP++ DVLEK++AIQK IT+VYSA T Sbjct: 353 SSAARWQMAMVSDSFPLEEEFKQWVKEVERSGGRMPTKQDVLEKKQAIQKIITFVYSADT 412 Query: 1269 VKQMLQEKKSASSRPLNIAAEKDRLRRELEVAQSRRGDGAEVERIQARLQELENISRQTK 1448 VKQMLQEKKS+SSRPLN+AAEKDRLRRE+E+AQS + D AEVERI+ R+QELE SR K Sbjct: 413 VKQMLQEKKSSSSRPLNVAAEKDRLRREMEIAQS-KNDEAEVERIKTRVQELE-ASRHAK 470 Query: 1449 QKDAKAVRLSEMNKRNRAENFKNASELKPVNTSLKAGEAGYDPFSRRWTRSRNYYVSSPG 1628 KDAKA++L+EMN++NR ENFKNASEL+PVN LKAGEAGYDPFSRRWTRSRNYYV+ PG Sbjct: 471 VKDAKALKLAEMNRKNRFENFKNASELRPVNIGLKAGEAGYDPFSRRWTRSRNYYVAKPG 530 Query: 1629 GGDEAAIATNEDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKLVDTSAPVD 1808 A ++ KLVDTSAPVD Sbjct: 531 ----EKAAARKNTTNVLVADAGSNITGVPVTAESGVVATAAALEAAADAGKLVDTSAPVD 586 Query: 1809 LGTESNSLHHFELTISLTELQKNXXXXXXXXXFMARKQRIEATVGRKVPENDGRRHSLTL 1988 GTESN LH+FEL ISL L K FMARKQR+EATVG +V ENDGRRH LTL Sbjct: 587 QGTESNFLHNFELPISLALLHKYGGAQGAQAGFMARKQRMEATVGFRVSENDGRRHVLTL 646 Query: 1989 TVGDYKRRRGLL 2024 +VGDYKRRRGLL Sbjct: 647 SVGDYKRRRGLL 658 >ref|XP_002305685.1| plus-3 domain-containing family protein [Populus trichocarpa] gi|222848649|gb|EEE86196.1| plus-3 domain-containing family protein [Populus trichocarpa] Length = 662 Score = 627 bits (1617), Expect = e-177 Identities = 359/672 (53%), Positives = 432/672 (64%), Gaps = 4/672 (0%) Frame = +3 Query: 21 MADLENLLLEAAGRTGAPGRNRHSRPPSRRQ-REGXXXXXXXXXXXXXXXXXAGYVNRKP 197 MADLENLLLEAAGRTG GRNR+S PSRR+ REG GY NRKP Sbjct: 1 MADLENLLLEAAGRTGKSGRNRNSILPSRRRKREGSYSDGGSDSRDDDSDDDRGYANRKP 60 Query: 198 SGSQVPLKKRLDPTEKXXXXXXXXXXXXXXN-DDHRXXXXXXXXXXXXLYKDDYDREQLA 374 SGSQVPLKKRL+ E+ D LYKD+ DR++LA Sbjct: 61 SGSQVPLKKRLETNERDGEEGSQDEGDYDGGGSDREGGSSDESDIGDDLYKDEDDRKKLA 120 Query: 375 QLTELQREMILSDRAQRRDDHRLKERVRAKQSGKK-TQPGKETPR-PTPXXXXXXXXXXX 548 Q++EL RE+IL+DRA ++ D L E++R K+ K T+ KETP P+ Sbjct: 121 QMSELDRELILADRADKKGDKHLTEKIRLKRDNDKPTRSRKETPPLPSSRGVRSSARSAD 180 Query: 549 XXXXKDDALNELRAKRMKQQDPDWKXXXXXXXXXXXXXXXXXPIRRKPTIAXXXXXXXXX 728 KDDALNELRAKR+KQQDP+ +++ + Sbjct: 181 RAAAKDDALNELRAKRLKQQDPEAHRKLRDVSRGSAGSRGFSQVKKNNFTSASLSSSSSE 240 Query: 729 XXXXXXXXXXRNRDEDIAGNDDLGDSDVYRPIDKENLTFEDIKDITIRRSRLAKWFVEPF 908 + DE G+ + DSD + T+EDIK+ITIRR++LAKWF+EP+ Sbjct: 241 SGSRS-----HSEDEGSTGDGGMADSDEDVEPGSKGPTYEDIKEITIRRTKLAKWFMEPW 295 Query: 909 FEELIVGCFVRVGIGMNKTKNKSVYRLCMVRNVDATDPDRQYKLENKSTHKYLNIFWASE 1088 FEELI+GCFVRVGIG ++K+ VYRLCMVRNVDA +PD+ YKLENKST+KYLN+ W ++ Sbjct: 296 FEELIIGCFVRVGIG--RSKSGPVYRLCMVRNVDAAEPDKPYKLENKSTYKYLNVTWGAD 353 Query: 1089 SSAARWQMARVSDSPPLEEEFDELVREVKKIGGRMPSRYDVLEKREAIQKTITYVYSAAT 1268 +SAARWQMA VSDS P EEE+ + VREV+ GGR+PS+ D+LEK+EAI+K+ T+VYSAAT Sbjct: 354 TSAARWQMAMVSDSGPTEEEYKQWVREVECGGGRLPSKQDILEKKEAIRKSNTFVYSAAT 413 Query: 1269 VKQMLQEKKSASSRPLNIAAEKDRLRRELEVAQSRRGDGAEVERIQARLQELENISRQTK 1448 VKQMLQEKKSASSRPLN+AAEKDRLRRELE+AQS+ D AEVERI AR++ELE SR K Sbjct: 414 VKQMLQEKKSASSRPLNVAAEKDRLRRELEIAQSKH-DEAEVERINARIEELE-ASRHAK 471 Query: 1449 QKDAKAVRLSEMNKRNRAENFKNASELKPVNTSLKAGEAGYDPFSRRWTRSRNYYVSSPG 1628 KDAKA+RL+EMN++NR ENF+NASE+KPVNT LKAGEAGYDPFSRRWTRSRNYYVS P Sbjct: 472 VKDAKAIRLAEMNRKNRVENFRNASEMKPVNTGLKAGEAGYDPFSRRWTRSRNYYVSKPA 531 Query: 1629 GGDEAAIATNEDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKLVDTSAPVD 1808 D+ +AT KLVDTSAPVD Sbjct: 532 EADD-PVATKISEANETVAVAASNQVVAGVMSEAGVAATEAALEAAADAGKLVDTSAPVD 590 Query: 1809 LGTESNSLHHFELTISLTELQKNXXXXXXXXXFMARKQRIEATVGRKVPENDGRRHSLTL 1988 GTESN++H FEL ISL LQ+ FMARKQRIEATVG +VPENDGRRH+LTL Sbjct: 591 QGTESNTMHSFELEISLIALQEFGGPQGAQAGFMARKQRIEATVGCRVPENDGRRHALTL 650 Query: 1989 TVGDYKRRRGLL 2024 TVGDYKRRRGLL Sbjct: 651 TVGDYKRRRGLL 662 >ref|XP_006422902.1| hypothetical protein CICLE_v10028000mg [Citrus clementina] gi|557524836|gb|ESR36142.1| hypothetical protein CICLE_v10028000mg [Citrus clementina] Length = 643 Score = 622 bits (1604), Expect = e-175 Identities = 361/673 (53%), Positives = 430/673 (63%), Gaps = 5/673 (0%) Frame = +3 Query: 21 MADLENLLLEAAGRTGAPGRNRHSRPPSRRQREGXXXXXXXXXXXXXXXXXAGYVNRKPS 200 MADLENLLLEAAGRT + GRNRHS S+R+REG GY +RKPS Sbjct: 1 MADLENLLLEAAGRTNSAGRNRHSASSSKRRREG--SYSGSDSRDDDSDDNRGYGSRKPS 58 Query: 201 GSQVPLKKRLDPTEKXXXXXXXXXXXXXXNDDHRXXXXXXXXXXXXLYKDD----YDREQ 368 GSQVPLKKRLDP E+ +DD ++ D D + Sbjct: 59 GSQVPLKKRLDPAER--------------DDDQGSQEEGDYDGGASEHEGDSSNESDDDN 104 Query: 369 LAQLTELQREMILSDRAQRRDDHRLKERVRAKQSGKKTQPGKET-PRPTPXXXXXXXXXX 545 Q+TEL+REM++ +R ++ D L+++ R+++ + T+ KET P P+ Sbjct: 105 HGQMTELEREMMIFERDDKKVDKNLRDKFRSRREERSTRSTKETPPLPSSRSARLAARSA 164 Query: 546 XXXXXKDDALNELRAKRMKQQDPDWKXXXXXXXXXXXXXXXXXPIRRKPTIAXXXXXXXX 725 KDDALNELRAKR+KQQDP+ P++RK Sbjct: 165 DRAAAKDDALNELRAKRLKQQDPEAHRRLRDASRGGSGSRVLSPVKRK----AFTPAGLS 220 Query: 726 XXXXXXXXXXXRNRDEDIAGNDDLGDSDVYRPIDKENLTFEDIKDITIRRSRLAKWFVEP 905 + DE G+ + DSD T++DIK+ITIRRS+LAKWF+EP Sbjct: 221 SSSQSESESRSHSDDEGSTGDGGMADSDDDGAPGSGRPTYDDIKEITIRRSKLAKWFMEP 280 Query: 906 FFEELIVGCFVRVGIGMNKTKNKSVYRLCMVRNVDATDPDRQYKLENKSTHKYLNIFWAS 1085 FFEELIVGCFVRVGIG ++KN +YRLCMVRNVDAT+PDR YKLEN++T KYLN+ W + Sbjct: 281 FFEELIVGCFVRVGIG--RSKNGPIYRLCMVRNVDATEPDRSYKLENRTTCKYLNVTWGN 338 Query: 1086 ESSAARWQMARVSDSPPLEEEFDELVREVKKIGGRMPSRYDVLEKREAIQKTITYVYSAA 1265 ESSAARWQMA VSDSPPLEEEF + +REV++ GGRMPS+ DVLEK+E+IQK T+VYSAA Sbjct: 339 ESSAARWQMAMVSDSPPLEEEFKQWLREVERNGGRMPSKQDVLEKKESIQKINTFVYSAA 398 Query: 1266 TVKQMLQEKKSASSRPLNIAAEKDRLRRELEVAQSRRGDGAEVERIQARLQELENISRQT 1445 TVKQMLQEKKSASSRPLN+AAEKDRLRRELEVAQSR D ++ERI+ RLQELE SR + Sbjct: 399 TVKQMLQEKKSASSRPLNVAAEKDRLRRELEVAQSRH-DDVDMERIKKRLQELE-ASRDS 456 Query: 1446 KQKDAKAVRLSEMNKRNRAENFKNASELKPVNTSLKAGEAGYDPFSRRWTRSRNYYVSSP 1625 K KDAKA+RL+EMN++NR ENFKNASELK VNTSLKAGEAGYDPFSRRWTRSRNYY+S P Sbjct: 457 KVKDAKAIRLAEMNRKNRVENFKNASELKRVNTSLKAGEAGYDPFSRRWTRSRNYYISKP 516 Query: 1626 GGGDEAAIATNEDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKLVDTSAPV 1805 G+E N D KLVDT+AP+ Sbjct: 517 --GEEVTAEANGD----KNGVPGGANGEEGATGEVGMAATEAALEAAAGAGKLVDTNAPL 570 Query: 1806 DLGTESNSLHHFELTISLTELQKNXXXXXXXXXFMARKQRIEATVGRKVPENDGRRHSLT 1985 DLGTESN LH FEL ISL L+K FMARKQRIEATVG +VPENDGRRH+LT Sbjct: 571 DLGTESNMLHDFELDISLNALKKFGGPQGVLAGFMARKQRIEATVGCQVPENDGRRHALT 630 Query: 1986 LTVGDYKRRRGLL 2024 LTVGDYKRRRGLL Sbjct: 631 LTVGDYKRRRGLL 643 >ref|XP_006486980.1| PREDICTED: RNA polymerase-associated protein RTF1 homolog isoform X1 [Citrus sinensis] gi|568867309|ref|XP_006486981.1| PREDICTED: RNA polymerase-associated protein RTF1 homolog isoform X2 [Citrus sinensis] Length = 643 Score = 620 bits (1599), Expect = e-175 Identities = 360/673 (53%), Positives = 430/673 (63%), Gaps = 5/673 (0%) Frame = +3 Query: 21 MADLENLLLEAAGRTGAPGRNRHSRPPSRRQREGXXXXXXXXXXXXXXXXXAGYVNRKPS 200 MADLENLLLEAAGRT + GRNRHS S+R+REG GY +RKPS Sbjct: 1 MADLENLLLEAAGRTNSAGRNRHSASSSKRRREG--SYSGSDSRDDDSDDNRGYGSRKPS 58 Query: 201 GSQVPLKKRLDPTEKXXXXXXXXXXXXXXNDDHRXXXXXXXXXXXXLYKDD----YDREQ 368 GSQVPLKKRLDPTE+ +DD ++ D D + Sbjct: 59 GSQVPLKKRLDPTER--------------DDDQGSQEEGDYDGGASEHEGDSSNESDDDN 104 Query: 369 LAQLTELQREMILSDRAQRRDDHRLKERVRAKQSGKKTQPGKET-PRPTPXXXXXXXXXX 545 Q+TEL+REM++ +R ++ D L+++ R+++ + T+ KET P P+ Sbjct: 105 HGQMTELEREMMIFERDDKKVDKNLRDKFRSRREERSTRSTKETPPLPSSRSARLAARSA 164 Query: 546 XXXXXKDDALNELRAKRMKQQDPDWKXXXXXXXXXXXXXXXXXPIRRKPTIAXXXXXXXX 725 KDDALNELRAKR+KQQDP+ P++RK Sbjct: 165 DRAAAKDDALNELRAKRLKQQDPEAHRRLRDASRGGSGSRVLSPVKRK----AFTPAGLS 220 Query: 726 XXXXXXXXXXXRNRDEDIAGNDDLGDSDVYRPIDKENLTFEDIKDITIRRSRLAKWFVEP 905 + DE G+ + DSD T++DIK+ITIRRS+LAKWF+EP Sbjct: 221 SSSQSESESRSHSDDEGSTGDGGMADSDDDGAPGSGRPTYDDIKEITIRRSKLAKWFMEP 280 Query: 906 FFEELIVGCFVRVGIGMNKTKNKSVYRLCMVRNVDATDPDRQYKLENKSTHKYLNIFWAS 1085 FFEELIVGCFVRVGIG ++KN +YRLCMVRNVDAT+PDR YKLEN++T KYLN+ W + Sbjct: 281 FFEELIVGCFVRVGIG--RSKNGPIYRLCMVRNVDATEPDRSYKLENRTTCKYLNVTWGN 338 Query: 1086 ESSAARWQMARVSDSPPLEEEFDELVREVKKIGGRMPSRYDVLEKREAIQKTITYVYSAA 1265 ESSAARWQMA VSDSPPLEEEF + +REV++ GRMPS+ DVLEK+++IQK T+VYSAA Sbjct: 339 ESSAARWQMAMVSDSPPLEEEFKQWLREVERNSGRMPSKQDVLEKKDSIQKINTFVYSAA 398 Query: 1266 TVKQMLQEKKSASSRPLNIAAEKDRLRRELEVAQSRRGDGAEVERIQARLQELENISRQT 1445 TVKQMLQEKKSASSRPLN+AAEKDRLRRELEVAQSR D ++ERI+ RLQELE SR + Sbjct: 399 TVKQMLQEKKSASSRPLNVAAEKDRLRRELEVAQSRH-DEVDMERIKKRLQELE-ASRDS 456 Query: 1446 KQKDAKAVRLSEMNKRNRAENFKNASELKPVNTSLKAGEAGYDPFSRRWTRSRNYYVSSP 1625 K KDAKA+RL+EMN++NR ENFKNASELK VNTSLKAGEAGYDPFSRRWTRSRNYY+S P Sbjct: 457 KVKDAKAIRLAEMNRKNRVENFKNASELKRVNTSLKAGEAGYDPFSRRWTRSRNYYISKP 516 Query: 1626 GGGDEAAIATNEDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKLVDTSAPV 1805 G+E N D KLVDT+AP+ Sbjct: 517 --GEEVTAEANGD----KNGVPGGANGEEGATGEVGMAATEAALEAAAGAGKLVDTNAPL 570 Query: 1806 DLGTESNSLHHFELTISLTELQKNXXXXXXXXXFMARKQRIEATVGRKVPENDGRRHSLT 1985 DLGTESN LH FEL ISL L+K FMARKQRIEATVG +VPENDGRRH+LT Sbjct: 571 DLGTESNMLHDFELDISLNALKKFGGPQGVLAGFMARKQRIEATVGCQVPENDGRRHALT 630 Query: 1986 LTVGDYKRRRGLL 2024 LTVGDYKRRRGLL Sbjct: 631 LTVGDYKRRRGLL 643 >ref|XP_004293522.1| PREDICTED: RNA polymerase-associated protein RTF1 homolog [Fragaria vesca subsp. vesca] Length = 657 Score = 618 bits (1593), Expect = e-174 Identities = 358/669 (53%), Positives = 424/669 (63%), Gaps = 1/669 (0%) Frame = +3 Query: 21 MADLENLLLEAAGRTGAPGRNRHSRPPSRRQREGXXXXXXXXXXXXXXXXXAGYVNRKPS 200 MADL++LLLEAAGRT + ++RHS S+R+R+ GY +RKPS Sbjct: 1 MADLDDLLLEAAGRTSSGRKSRHSHSSSKRRRDDSYSDGGSDSRGDDSDDGRGYASRKPS 60 Query: 201 GSQVPLKKRLDPTEKXXXXXXXXXXXXXXNDDHRXXXXXXXXXXXXLYKDDYDREQLAQL 380 GSQVPLKKRLDP+E + R LYKD+ DR +LA++ Sbjct: 61 GSQVPLKKRLDPSEVGDEHDSQDEGDYNDSGSDRGGESNESDVGSDLYKDENDRRKLAEM 120 Query: 381 TELQREMILSDRAQRRDDHRLKERVRAK-QSGKKTQPGKETPRPTPXXXXXXXXXXXXXX 557 +ELQRE+ILSDRAQ++DD LKE+ R K GK TQ K TP Sbjct: 121 SELQRELILSDRAQKKDDKSLKEKFRPKWDKGKATQSRKVTPPLPSSRVRSSARSADRAA 180 Query: 558 XKDDALNELRAKRMKQQDPDWKXXXXXXXXXXXXXXXXXPIRRKPTIAXXXXXXXXXXXX 737 KDDALNELRAKR+KQQDP+ TI Sbjct: 181 AKDDALNELRAKRLKQQDPEAHRKLRDVSRGSVGSKNF-----SHTIKKSFSAVRRSSSS 235 Query: 738 XXXXXXXRNRDEDIAGNDDLGDSDVYRPIDKENLTFEDIKDITIRRSRLAKWFVEPFFEE 917 + D+D + DD DSD R + LTFEDIK+ITIRRSRLAKW +EPFFEE Sbjct: 236 QSDSESRSHSDDDGSSADDAIDSDDER--GNQGLTFEDIKEITIRRSRLAKWLMEPFFEE 293 Query: 918 LIVGCFVRVGIGMNKTKNKSVYRLCMVRNVDATDPDRQYKLENKSTHKYLNIFWASESSA 1097 LIVGC VRVGIG K+ + +YRLC V NVD++DPDRQYKLENK+THKYLN+ W +E+SA Sbjct: 294 LIVGCCVRVGIGKTKS-GRPIYRLCSVCNVDSSDPDRQYKLENKTTHKYLNVVWGNENSA 352 Query: 1098 ARWQMARVSDSPPLEEEFDELVREVKKIGGRMPSRYDVLEKREAIQKTITYVYSAATVKQ 1277 ARWQMA VSDS PLEEE+D+ VREV+K GGR+PS+ DVLEK+EAI+KT T+VYSA TVKQ Sbjct: 353 ARWQMAMVSDSLPLEEEYDQWVREVEKNGGRLPSKEDVLEKKEAIKKTNTFVYSAKTVKQ 412 Query: 1278 MLQEKKSASSRPLNIAAEKDRLRRELEVAQSRRGDGAEVERIQARLQELENISRQTKQKD 1457 M+QEKKSASSRPLNIA EKDRLRRELE+AQS+ D AEVERI+ARL++LE +Q++ KD Sbjct: 413 MIQEKKSASSRPLNIALEKDRLRRELEIAQSKH-DDAEVERIKARLEQLE-ARQQSQGKD 470 Query: 1458 AKAVRLSEMNKRNRAENFKNASELKPVNTSLKAGEAGYDPFSRRWTRSRNYYVSSPGGGD 1637 +KAVRL+EMN++NR +NFKNAS LKPV T LKAGEAGYDPFSRRWTRSRNYYVS P Sbjct: 471 SKAVRLAEMNRKNRVDNFKNASGLKPVKTGLKAGEAGYDPFSRRWTRSRNYYVSKPDEQK 530 Query: 1638 EAAIATNEDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKLVDTSAPVDLGT 1817 + A A KL+DT APVD GT Sbjct: 531 DDAEA--NAVAAESLAEVETNGTGGVVAVRAGLEATAAALEAAAGAGKLIDTMAPVDQGT 588 Query: 1818 ESNSLHHFELTISLTELQKNXXXXXXXXXFMARKQRIEATVGRKVPENDGRRHSLTLTVG 1997 SN LH+FEL ISL LQK FMARKQRIEATVG +VPE+DGRRH+LTL+V Sbjct: 589 SSNPLHNFELPISLATLQKFGGPQGAQEGFMARKQRIEATVGVRVPEDDGRRHALTLSVS 648 Query: 1998 DYKRRRGLL 2024 DYKRRRGLL Sbjct: 649 DYKRRRGLL 657 >ref|XP_006392066.1| hypothetical protein EUTSA_v10023338mg [Eutrema salsugineum] gi|557088572|gb|ESQ29352.1| hypothetical protein EUTSA_v10023338mg [Eutrema salsugineum] Length = 644 Score = 579 bits (1493), Expect = e-162 Identities = 337/672 (50%), Positives = 414/672 (61%), Gaps = 4/672 (0%) Frame = +3 Query: 21 MADLENLLLEAAGRTGAPGRNRHSRPPSRRQREGXXXXXXXXXXXXXXXXXAGYVNRKPS 200 M DL++LLLEAAGRT APGR+RHS PPS R+REG GY +RKPS Sbjct: 1 MVDLDDLLLEAAGRTNAPGRSRHSHPPSSRRREGSYSDGGSDSRDDSDEER-GYASRKPS 59 Query: 201 GSQVPLKKRLDPTEKXXXXXXXXXXXXXXNDDHRXXXXXXXXXXXXLYKDDYDREQLAQL 380 GSQVPLKKRL+ E+ D LYK++ DR++LA + Sbjct: 60 GSQVPLKKRLE-AEREDRAARDEAGYGDGPSDREGDSSEESDFGDDLYKNEEDRQKLAGM 118 Query: 381 TELQREMILSDRAQRRDDHRLKERVRAKQSGKKTQPGKETPRPTPXXXXXXXXXXXXXXX 560 TE QREMIL++RA ++ D E++R+K+ +KT K+ +P P Sbjct: 119 TEFQREMILAERADKKGDKNFTEKLRSKREKEKTPVSKKETQPLPASRGVRSSARSADRA 178 Query: 561 --KDDALNELRAKRMKQQDPDWKXXXXXXXXXXXXXXXXXPIRRKPTIAXXXXXXXXXXX 734 KDDALNELRAKRMKQQ+P ++RKP + Sbjct: 179 AAKDDALNELRAKRMKQQEPASLRKLRDASKGGSGSRDFSSMKRKPLASSNLSNSSQSDS 238 Query: 735 XXXXXXXXRNRDEDIAGNDDLGDSDVYRPIDKENLTFEDIKDITIRRSRLAKWFVEPFFE 914 R++ +D N + DSD R + TFEDIKDITIRRS+LAKW +EPFFE Sbjct: 239 DS------RSQSDDEGSNGGMVDSDDDR---SDVPTFEDIKDITIRRSKLAKWLMEPFFE 289 Query: 915 ELIVGCFVRVGIGMNKTKNKSVYRLCMVRNVDATDPDRQYKLENKSTHKYLNIFWASESS 1094 ELIVGCFVRVGIG ++KN +YRLCMV+NVDATDPD+ YKLENK+THKYLN W ESS Sbjct: 290 ELIVGCFVRVGIG--RSKNGPIYRLCMVKNVDATDPDKTYKLENKTTHKYLNCIWGHESS 347 Query: 1095 AARWQMARVSDSPPLEEEFDELVREVKKIGGRMPSRYDVLEKREAIQKTITYVYSAATVK 1274 AARWQMA +SD PLEEE+ + +REV++ GRMP++ D+ EK+EAI++ ++VYSA TVK Sbjct: 348 AARWQMAMISDGYPLEEEYRQWIREVERTNGRMPTKQDISEKKEAIKRINSFVYSAETVK 407 Query: 1275 QMLQEKKSASSRPLNIAAEKDRLRRELEVAQSRRGDGAEVERIQARLQELENISRQTKQK 1454 QMLQEKKSAS RP+NIAAEKDRLR+ELEVAQ + D A VERI+A++++LE SR+ K+ Sbjct: 408 QMLQEKKSASVRPMNIAAEKDRLRKELEVAQI-KNDEAGVERIKAKIKQLE-ASREKKEV 465 Query: 1455 DAKAVRLSEMNKRNRAENFKNASELKPVNTSLKAGEAGYDPFSRRWTRSRNYY--VSSPG 1628 D KA++L+EMNK+NRAENFKNASE+K + SLKAGEAGYDPFSRRWTRS NYY G Sbjct: 466 DKKALKLAEMNKKNRAENFKNASEVKSITASLKAGEAGYDPFSRRWTRSSNYYNGKRKEG 525 Query: 1629 GGDEAAIATNEDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKLVDTSAPVD 1808 G EA A + KL+DT AP+ Sbjct: 526 GDTEATAAAAVE-------------TNGAAAGENGVEATEAALEAAADAGKLIDTRAPIG 572 Query: 1809 LGTESNSLHHFELTISLTELQKNXXXXXXXXXFMARKQRIEATVGRKVPENDGRRHSLTL 1988 G E N LH+FEL +SLT LQK FMARKQ EATVG +V ENDG+RH LTL Sbjct: 573 QGAEHNLLHNFELPLSLTALQKYGGPQGVQKAFMARKQVTEATVGCRVAENDGKRHGLTL 632 Query: 1989 TVGDYKRRRGLL 2024 TV DYKRRRGLL Sbjct: 633 TVSDYKRRRGLL 644 >ref|XP_006853567.1| hypothetical protein AMTR_s00032p00242160 [Amborella trichopoda] gi|548857220|gb|ERN15034.1| hypothetical protein AMTR_s00032p00242160 [Amborella trichopoda] Length = 624 Score = 579 bits (1492), Expect = e-162 Identities = 347/673 (51%), Positives = 421/673 (62%), Gaps = 7/673 (1%) Frame = +3 Query: 27 DLENLLLEAAGRTGAPGRNRHSRPPSRRQREGXXXXXXXXXXXXXXXXX----AGYVNRK 194 DLE+LLLEAAGRT GR + S+ +R+ EG GY +RK Sbjct: 5 DLEHLLLEAAGRTSTSGRKKPSQTQPKRRHEGSYSDDGSDPKYESEDDDDSDGPGYPSRK 64 Query: 195 PSGSQVPLKKRLDPTEKXXXXXXXXXXXXXXNDDHRXXXXXXXXXXXXLYKDDYDREQLA 374 PSGSQVPLKKR + +K + D LYKD+ DRE+L+ Sbjct: 65 PSGSQVPLKKRFETADKDDMRGKGDRDGGSDDSDS------GLSVGSDLYKDENDREELS 118 Query: 375 QLTELQREMILSDRAQRRDDHRLKERVRAKQSGKKTQPGKETPRPTPXXXXXXXXXXXXX 554 ++TEL+REMIL+DRA RRD+ ++ + +Q K GKE P P Sbjct: 119 RMTELEREMILTDRADRRDN-LMRMKKAERQGDKSRSTGKELMAP-PQARGRSSAKSDRM 176 Query: 555 XXKDDALNELRAKRMKQQDPDWKXXXXXXXXXXXXXXXXXPIRRKPTIAXXXXXXXXXXX 734 KD AL EL AK M+++ + P+ P + Sbjct: 177 ANKD-ALTELLAK-MQRKSRNRSERQDLMVVRNKAAAAASPVSDSPPSSGV--------- 225 Query: 735 XXXXXXXXRNRDEDIAGNDDLGDSDVYR--PIDKENLTFEDIKDITIRRSRLAKWFVEPF 908 R+ + + +LG+SD E+ TFEDIK ITIRRSRLAKWF+EPF Sbjct: 226 --------RSSSDGREVSVELGESDEDEGPTSGSEHPTFEDIKGITIRRSRLAKWFLEPF 277 Query: 909 FEELIVGCFVRVGIGMNKTKNKSVYRLCMVRNVDATDPDRQYKLENKSTHKYLNIFWASE 1088 FEE IVGCFVRVGIG +++ +S+YRLCMVRNVDA+DPDRQYK EN++THKYLN W SE Sbjct: 278 FEEAIVGCFVRVGIGTSRS-GQSIYRLCMVRNVDASDPDRQYKFENRTTHKYLNCVWGSE 336 Query: 1089 SSAARWQMARVSDSPPLEEEFDELVREVKKIGGRMPSRYDVLEKREAIQK-TITYVYSAA 1265 +SAARWQMAR+SDS PLE+EF E VREV++ GGRMP++ DV++K EAIQ+ + ++VYSAA Sbjct: 337 ASAARWQMARISDSAPLEKEFLEWVREVERGGGRMPTKQDVIDKGEAIQRLSSSFVYSAA 396 Query: 1266 TVKQMLQEKKSASSRPLNIAAEKDRLRRELEVAQSRRGDGAEVERIQARLQELENISRQT 1445 TVKQMLQEKKSAS+RP NIAAEKDRLR+E+E+A+SR D AE ER++ARLQELEN+S+Q+ Sbjct: 397 TVKQMLQEKKSASTRPSNIAAEKDRLRKEMELAESRL-DHAEAERVRARLQELENLSQQS 455 Query: 1446 KQKDAKAVRLSEMNKRNRAENFKNASELKPVNTSLKAGEAGYDPFSRRWTRSRNYYVSSP 1625 K+KDAKAV L+EMN+RNRAENFKNASELKPVNTSLKAGEAGYDPFSRRWTRSRNYYVS P Sbjct: 456 KKKDAKAVMLAEMNRRNRAENFKNASELKPVNTSLKAGEAGYDPFSRRWTRSRNYYVSKP 515 Query: 1626 GGGDEAAIATNEDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKLVDTSAPV 1805 GG E E KLVDT APV Sbjct: 516 EGGGEVVKEEAE------------------------TAATKAALEAAADAGKLVDTKAPV 551 Query: 1806 DLGTESNSLHHFELTISLTELQKNXXXXXXXXXFMARKQRIEATVGRKVPENDGRRHSLT 1985 D GTES+SLH FEL ISL LQ+ FMARKQRIEAT+G +VPENDGRRHSLT Sbjct: 552 DEGTESHSLHDFELPISLAGLQRFGGPQGAQLAFMARKQRIEATIGVRVPENDGRRHSLT 611 Query: 1986 LTVGDYKRRRGLL 2024 L+V DYKRRRGL+ Sbjct: 612 LSVSDYKRRRGLV 624 >ref|XP_004232840.1| PREDICTED: RNA polymerase-associated protein RTF1 homolog isoform 1 [Solanum lycopersicum] gi|460374083|ref|XP_004232841.1| PREDICTED: RNA polymerase-associated protein RTF1 homolog isoform 2 [Solanum lycopersicum] Length = 645 Score = 575 bits (1482), Expect = e-161 Identities = 339/671 (50%), Positives = 421/671 (62%), Gaps = 5/671 (0%) Frame = +3 Query: 27 DLENLLLEAAGRTGAPGRNRHSRPP--SRRQREGXXXXXXXXXXXXXXXXXAGYVNRKPS 200 +L +LLLEAAGRT GRNR PP S+R + GY RK S Sbjct: 4 ELTDLLLEAAGRTNTGGRNR---PPHSSKRHHKSSYSDDGSDSRDDDSDDGRGYSGRKLS 60 Query: 201 GSQVPLKKRLDPTEKXXXXXXXXXXXXXXNDDHRXXXXXXXXXXXXLYKDDYDREQLAQL 380 GSQVPLKKRLDP E+ + D LYKDD DR++LAQ+ Sbjct: 61 GSQVPLKKRLDPQERDDDHSSHGEGN---DGDGYGNESDDDSIGSDLYKDDDDRQKLAQM 117 Query: 381 TELQREMILSDRAQRRDDHRLKERVRAKQSGKKTQPGKETPRPT-PXXXXXXXXXXXXXX 557 TEL+REMIL+DRA ++ D L + K + QP K++ P+ Sbjct: 118 TELEREMILTDRAAKKSDRSLHD----KMIKDRAQPRKQSSPPSHSRGMRSSTRALDRAA 173 Query: 558 XKDDALNELRAKRMKQQ-DPDWKXXXXXXXXXXXXXXXXXPIRRKPTIAXXXXXXXXXXX 734 +DDALNE+RAKR +QQ DP+ + PI+R+ A Sbjct: 174 DRDDALNEIRAKRARQQQDPEGQFKLRDAARKGSGSRGYSPIKRRSFTAASLGSSPTRGE 233 Query: 735 XXXXXXXXRNRDEDIAGNDDLGDSDVYRPIDKENL-TFEDIKDITIRRSRLAKWFVEPFF 911 + + D + +D + DSD + + L TFEDIK+I+IRRS+LAKWF+EPFF Sbjct: 234 SDS-----HSNEGDSSADDGMDDSDDDKSSPESQLPTFEDIKEISIRRSKLAKWFMEPFF 288 Query: 912 EELIVGCFVRVGIGMNKTKNKSVYRLCMVRNVDATDPDRQYKLENKSTHKYLNIFWASES 1091 +ELIVGCFVRVGIG ++++ +YRLC+VRNVDA+DP+RQYKLENK+T K+LN+ W +E+ Sbjct: 289 DELIVGCFVRVGIG--RSRSGPIYRLCVVRNVDASDPNRQYKLENKTTSKFLNVVWGNEN 346 Query: 1092 SAARWQMARVSDSPPLEEEFDELVREVKKIGGRMPSRYDVLEKREAIQKTITYVYSAATV 1271 SAARWQMA +SDSPPL +EFD+ VREV++ GGRMPS+ DVLEK+EAIQK+ T+VYSA TV Sbjct: 347 SAARWQMAMISDSPPLRDEFDQWVREVERSGGRMPSKQDVLEKKEAIQKSNTFVYSADTV 406 Query: 1272 KQMLQEKKSASSRPLNIAAEKDRLRRELEVAQSRRGDGAEVERIQARLQELENISRQTKQ 1451 KQMLQ+KKSA+ RPLN+AAEKDRLRR++EVA+ + D AEVERI+ARLQELE+ SR+ ++ Sbjct: 407 KQMLQQKKSATWRPLNVAAEKDRLRRDMEVAK-MKNDEAEVERIKARLQELED-SRKVQE 464 Query: 1452 KDAKAVRLSEMNKRNRAENFKNASELKPVNTSLKAGEAGYDPFSRRWTRSRNYYVSSPGG 1631 KD KA RL+EMN++NR ENFKNASEL+PVN LKAGEAGYDPFSRRWTRS NY+ Sbjct: 465 KDDKARRLAEMNRKNRVENFKNASELRPVNQLLKAGEAGYDPFSRRWTRSTNYFAKGASN 524 Query: 1632 GDEAAIATNEDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKLVDTSAPVDL 1811 G+ AA A KLVDT+APVD Sbjct: 525 GEAAAAAA----------LAAEDNNGAGGTADGGMAATAAALQAAAGAGKLVDTNAPVDQ 574 Query: 1812 GTESNSLHHFELTISLTELQKNXXXXXXXXXFMARKQRIEATVGRKVPENDGRRHSLTLT 1991 GTESN+LH F+L ISL LQK FMARKQRIEATVG VPENDGRRH+LTL+ Sbjct: 575 GTESNTLHDFDLPISLAVLQKFGGSQGGQAGFMARKQRIEATVGCSVPENDGRRHALTLS 634 Query: 1992 VGDYKRRRGLL 2024 V DYKRRRGLL Sbjct: 635 VSDYKRRRGLL 645 >ref|NP_176299.1| Paf1C-like transcription factor [Arabidopsis thaliana] gi|12323334|gb|AAG51642.1|AC018908_8 unknown protein; 78902-80833 [Arabidopsis thaliana] gi|332195649|gb|AEE33770.1| Paf1C-like transcription factor [Arabidopsis thaliana] Length = 643 Score = 572 bits (1475), Expect = e-160 Identities = 332/674 (49%), Positives = 415/674 (61%), Gaps = 6/674 (0%) Frame = +3 Query: 21 MADLENLLLEAAGRTGAPGRNRHSRPPSRRQREGXXXXXXXXXXXXXXXXXAGYVNRKPS 200 M DLENLLLEAAGRT + GR+RH PPS R+REG GY +RKPS Sbjct: 1 MGDLENLLLEAAGRTNSAGRSRH--PPSSRRREGSYSDGSSDSRDDSDEDR-GYASRKPS 57 Query: 201 GSQVPLKKRLDPTEKXXXXXXXXXXXXXXNDDHRXXXXXXXXXXXXLYKDDYDREQLAQL 380 GSQVPLKKRL+ E+ D LYK++ DR++LA + Sbjct: 58 GSQVPLKKRLE-AEREDRAARVEGGYGDGPSDREGDSSEESDFGDDLYKNEEDRQKLAGM 116 Query: 381 TELQREMILSDRAQRRDDHRLKERVRAKQSGKKTQPGKETPRPTPXXXXXXXXXXXXXXX 560 TE QREMILS+RA ++ D E++R+K+ +KT K+ +P P Sbjct: 117 TEFQREMILSERADKKGDKNFTEKLRSKRESEKTPVSKKETQPLPASRGVRSSARSADRA 176 Query: 561 --KDDALNELRAKRMKQQDPDWKXXXXXXXXXXXXXXXXXPIRRKPTIAXXXXXXXXXXX 734 KDDALNELRAKRMKQQDP +RKP + Sbjct: 177 AAKDDALNELRAKRMKQQDPAALRKLRDASKGGSGSRDFSSTKRKPLASSNLSSSSQSDS 236 Query: 735 XXXXXXXXRNRDEDIAGNDDLGDSDVYRPIDKENLTFEDIKDITIRRSRLAKWFVEPFFE 914 R++ +D N + DSD R + TFED+K++TIRRS+LAKW +EPFFE Sbjct: 237 DS------RSQSDDEGSNGGMLDSDDDR---SDVPTFEDVKEVTIRRSKLAKWLMEPFFE 287 Query: 915 ELIVGCFVRVGIGMNKTKNKSVYRLCMVRNVDATDPDRQYKLENKSTHKYLNIFWASESS 1094 ELIVGCFVRVGIG ++K+ +YRLC V+NVDATDPD+ YKLENK+THKYLN+ W +E+S Sbjct: 288 ELIVGCFVRVGIG--RSKSGPIYRLCWVKNVDATDPDKTYKLENKTTHKYLNVVWGNETS 345 Query: 1095 AARWQMARVSDSPPLEEEFDELVREVKKIGGRMPSRYDVLEKREAIQKTITYVYSAATVK 1274 AARWQMA +SD PLEEE+ + +REV++ GRMP++ D+ EK+EAIQ+T ++VYSA TVK Sbjct: 346 AARWQMAMISDGHPLEEEYRQWIREVERTNGRMPTKQDISEKKEAIQRTNSFVYSAETVK 405 Query: 1275 QMLQEKKSASSRPLNIAAEKDRLRRELEVAQSRRGDGAEVERIQARLQELENISRQTKQK 1454 QMLQEKKSAS RP+N+AAEKDRLR+ELE+AQS + D A VERI++++++L+ SR K Sbjct: 406 QMLQEKKSASVRPMNVAAEKDRLRKELEIAQS-KNDEAGVERIKSKIKQLD-ASRNKKGV 463 Query: 1455 DAKAVRLSEMNKRNRAENFKNASELKPVNTSLKAGEAGYDPFSRRWTRSRNYYVSSPGGG 1634 D KA++L+EMNK+NRAENFKNASE+K + SLKAGEAGYDPFSRRWTRS NYY G Sbjct: 464 DKKALKLAEMNKKNRAENFKNASEVKSITASLKAGEAGYDPFSRRWTRSSNYYNGKNKGK 523 Query: 1635 D----EAAIATNEDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKLVDTSAP 1802 D EAA+A + KL+DT AP Sbjct: 524 DGEENEAAVAAAVE--------------TNGADAGAGVEATEAALEAAAEAGKLIDTRAP 569 Query: 1803 VDLGTESNSLHHFELTISLTELQKNXXXXXXXXXFMARKQRIEATVGRKVPENDGRRHSL 1982 + G E N LH+FEL++SLT LQK FMARKQ EATVG +V ENDG+RH L Sbjct: 570 IGQGAEHNQLHNFELSLSLTALQKYGGPQGVQKAFMARKQLTEATVGCRVAENDGKRHGL 629 Query: 1983 TLTVGDYKRRRGLL 2024 TLTV DYKRRRGLL Sbjct: 630 TLTVSDYKRRRGLL 643 >ref|XP_006347073.1| PREDICTED: RNA polymerase-associated protein RTF1 homolog [Solanum tuberosum] Length = 652 Score = 572 bits (1473), Expect = e-160 Identities = 339/671 (50%), Positives = 425/671 (63%), Gaps = 5/671 (0%) Frame = +3 Query: 27 DLENLLLEAAGRTGAPGRNRHSRPP--SRRQREGXXXXXXXXXXXXXXXXXAGYVNRKPS 200 +L +LLLEAAGRT GRNR PP SRR + GY RK S Sbjct: 4 ELTDLLLEAAGRTNTGGRNR---PPQSSRRHHKSSYSDDGSDSRDDDSDDGRGYSGRKLS 60 Query: 201 GSQVPLKKRLDPTEKXXXXXXXXXXXXXXNDDHRXXXXXXXXXXXXLYKDDYDREQLAQL 380 GSQVPLKKRLDP E+ + D LYKDD DR++LAQ+ Sbjct: 61 GSQVPLKKRLDPQERDDDHSSHGEGN---DGDGYGNESDDDSIGSDLYKDDDDRQKLAQM 117 Query: 381 TELQREMILSDRAQRRDDHRLKERVRAKQSGKKTQPGKETPRPT-PXXXXXXXXXXXXXX 557 TEL+REMIL+DRA ++ D L + K + QP K++ P+ Sbjct: 118 TELEREMILTDRAAKKSDRSLHD----KMIKDRAQPRKQSSPPSHSRGMRSSTRALDRAA 173 Query: 558 XKDDALNELRAKRMKQQ-DPDWKXXXXXXXXXXXXXXXXXPIRRKPTIAXXXXXXXXXXX 734 +DDALNE+RAKR +QQ DP+ + PI+R+ A Sbjct: 174 DRDDALNEIRAKRARQQQDPEGQFKLRDAARKGSGGRGYSPIKRRSFTAATLGSSPTRGE 233 Query: 735 XXXXXXXXRNRDEDIAGNDDLGDSDVYRPIDKENL-TFEDIKDITIRRSRLAKWFVEPFF 911 + + D + +D + DSD + + L TFEDIK+I+IRRS+LAKWF+EPFF Sbjct: 234 SDS-----HSNEGDSSADDGMDDSDDDKSSPESQLPTFEDIKEISIRRSKLAKWFMEPFF 288 Query: 912 EELIVGCFVRVGIGMNKTKNKSVYRLCMVRNVDATDPDRQYKLENKSTHKYLNIFWASES 1091 +ELIVGCFVRVGIG ++++ +YRLC+VRNVD++DP+RQYKLENK+T K+LN+ W +E+ Sbjct: 289 DELIVGCFVRVGIG--RSRSGPIYRLCVVRNVDSSDPNRQYKLENKTTSKFLNVVWGNEN 346 Query: 1092 SAARWQMARVSDSPPLEEEFDELVREVKKIGGRMPSRYDVLEKREAIQKTITYVYSAATV 1271 SAARWQMA VSDSPPL +EFD+ VREV++ GGRMPS+ DVLEK+EAIQK+ T+VYSA TV Sbjct: 347 SAARWQMAMVSDSPPLRDEFDQWVREVERSGGRMPSKQDVLEKKEAIQKSNTFVYSADTV 406 Query: 1272 KQMLQEKKSASSRPLNIAAEKDRLRRELEVAQSRRGDGAEVERIQARLQELENISRQTKQ 1451 KQMLQ+KKSA+ RPLN+AAEKDRLRR++EVA+ + D AEVERI+ARLQEL++ SR+ ++ Sbjct: 407 KQMLQQKKSATWRPLNVAAEKDRLRRDMEVAK-MKNDEAEVERIKARLQELDD-SRKVQE 464 Query: 1452 KDAKAVRLSEMNKRNRAENFKNASELKPVNTSLKAGEAGYDPFSRRWTRSRNYYVSSPGG 1631 KD KA RL+EMN++NR ENFKNASEL+PVN LKAG+AGYDPFSRRWTRS NY+ + G Sbjct: 465 KDDKARRLAEMNRKNRVENFKNASELRPVNQLLKAGQAGYDPFSRRWTRSTNYF--AKGA 522 Query: 1632 GDEAAIATNEDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKLVDTSAPVDL 1811 +EA A+N + KLVDT+APVD Sbjct: 523 NEEAEGASNGE-VAAAAALAAEDNNGASGTADGGMAATAAALQAAAGAGKLVDTNAPVDQ 581 Query: 1812 GTESNSLHHFELTISLTELQKNXXXXXXXXXFMARKQRIEATVGRKVPENDGRRHSLTLT 1991 GTESN+LH F+L ISL LQK FMARKQRIEATVG VPENDGRRH+LTL+ Sbjct: 582 GTESNTLHDFDLPISLAVLQKFGGSQGGQAGFMARKQRIEATVGCSVPENDGRRHALTLS 641 Query: 1992 VGDYKRRRGLL 2024 V DYKRRRGLL Sbjct: 642 VSDYKRRRGLL 652 >ref|XP_006300844.1| hypothetical protein CARUB_v10019938mg [Capsella rubella] gi|482569554|gb|EOA33742.1| hypothetical protein CARUB_v10019938mg [Capsella rubella] Length = 644 Score = 570 bits (1469), Expect = e-159 Identities = 327/675 (48%), Positives = 413/675 (61%), Gaps = 7/675 (1%) Frame = +3 Query: 21 MADLENLLLEAAGRTGAPGRNRHSRPPSRRQREGXXXXXXXXXXXXXXXXXAGYVNRKPS 200 M DLENLLLEAAGRT G++RHS PPS R+REG G+ +RKPS Sbjct: 1 MGDLENLLLEAAGRTNPAGKSRHSHPPSSRRREGSYSDGSSDSRDDSDDDR-GFASRKPS 59 Query: 201 GSQVPLKKRLDPTEKXXXXXXXXXXXXXXNDDHRXXXXXXXXXXXXLYKDDYDREQLAQL 380 GSQVPLKKRL+ E+ D LYK++ DR++LA + Sbjct: 60 GSQVPLKKRLE-AEREDRAARNESGYGDGPSDREGDSSEESDFGDDLYKNEEDRQKLAGM 118 Query: 381 TELQREMILSDRAQRRDDHRLKERVRAKQSGKKTQPGKETPRPTPXXXXXXXXXXXXXXX 560 TE QREMIL++RA ++ D E++R+K+ +KT K+ +P P Sbjct: 119 TEFQREMILAERADKKGDKNFTEKLRSKRENEKTPVSKKETQPLPASRGVRSSARSADRA 178 Query: 561 --KDDALNELRAKRMKQQDPDWKXXXXXXXXXXXXXXXXXPIRRKPTIAXXXXXXXXXXX 734 KDDALNELRAKRMKQQDP ++RKP + Sbjct: 179 AAKDDALNELRAKRMKQQDPAALRKLRDASKGGSGSRDFSSLKRKPLASSNLSNSSQSDS 238 Query: 735 XXXXXXXXRNRDEDIAGNDDLGDSDVYRPIDKENL-TFEDIKDITIRRSRLAKWFVEPFF 911 R++ +D N L D D+ ++ TFEDIK+ITIRRS+LAKW +EPFF Sbjct: 239 DS------RSQSDDEGSNAGLDSDD-----DRSDMPTFEDIKEITIRRSKLAKWLMEPFF 287 Query: 912 EELIVGCFVRVGIGMNKTKNKSVYRLCMVRNVDATDPDRQYKLENKSTHKYLNIFWASES 1091 EELIVGCFVRVGIG ++K+ +YRLCMVRNVDATDPD+ YKLENK+THKYLN+ W +E+ Sbjct: 288 EELIVGCFVRVGIG--RSKSGPIYRLCMVRNVDATDPDKTYKLENKTTHKYLNVIWGNET 345 Query: 1092 SAARWQMARVSDSPPLEEEFDELVREVKKIGGRMPSRYDVLEKREAIQKTITYVYSAATV 1271 SAARWQMA +SD PLEEE+ + +REV++ GRMP++ D+ EK+EAI++ +++YSA TV Sbjct: 346 SAARWQMAMISDGHPLEEEYRQWIREVERTNGRMPTKQDISEKKEAIKRINSFIYSAETV 405 Query: 1272 KQMLQEKKSASSRPLNIAAEKDRLRRELEVAQSRRGDGAEVERIQARLQELENISRQTKQ 1451 KQMLQEKKSAS RP+N+AAEKDRLR+ELE+AQS + D A VERI+ ++++L+ SR K Sbjct: 406 KQMLQEKKSASVRPMNVAAEKDRLRKELEIAQS-KNDEAGVERIKTKIKQLD-ASRNKKG 463 Query: 1452 KDAKAVRLSEMNKRNRAENFKNASELKPVNTSLKAGEAGYDPFSRRWTRSRNYY----VS 1619 D KA++L+EMNK+NRAENFKNASE+K + SLK GEAGYDPFSRRWTRS NYY Sbjct: 464 VDKKALKLAEMNKKNRAENFKNASEVKSITASLKVGEAGYDPFSRRWTRSSNYYNGKNKG 523 Query: 1620 SPGGGDEAAIATNEDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKLVDTSA 1799 G +EAA+A + KL+DT A Sbjct: 524 KEGAENEAAVAAAVE--------------TNGVDAGAGVEATEAALEAAAEAGKLIDTRA 569 Query: 1800 PVDLGTESNSLHHFELTISLTELQKNXXXXXXXXXFMARKQRIEATVGRKVPENDGRRHS 1979 P+ G E N LH+FEL++SL LQK FMARKQ EATVG +V ENDG+RH Sbjct: 570 PIGQGAEHNQLHNFELSVSLAALQKYGGPQGVQKAFMARKQVTEATVGCRVAENDGKRHG 629 Query: 1980 LTLTVGDYKRRRGLL 2024 LTLTV DYKRRRGLL Sbjct: 630 LTLTVSDYKRRRGLL 644