BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Akebia27_contig00002768
         (5732 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN66189.1| hypothetical protein VITISV_006047 [Vitis vinifera]  1444   0.0  
ref|XP_007200265.1| hypothetical protein PRUPE_ppa015000mg [Prun...  1418   0.0  
emb|CAH65904.1| H0207B04.5 [Oryza sativa Indica Group]               1313   0.0  
dbj|BAH80025.1| putative retrotransposon protein [Oryza sativa I...  1310   0.0  
gb|ABA97812.1| retrotransposon protein, putative, Ty3-gypsy subc...  1309   0.0  
emb|CAH66120.1| OSIGBa0146N20.5 [Oryza sativa Indica Group]          1309   0.0  
gb|ABA98266.1| retrotransposon protein, putative, Ty3-gypsy subc...  1306   0.0  
gb|AAL78097.1|AC093568_7 Putative polyprotein [Oryza sativa] gi|...  1306   0.0  
emb|CAD40208.2| OSJNBa0019J05.6 [Oryza sativa Japonica Group]        1305   0.0  
emb|CAH66289.1| OSIGBa0161P06.6 [Oryza sativa Indica Group]          1303   0.0  
gb|AAS98511.1| putative polyprotein [Oryza sativa Japonica Group]    1303   0.0  
gb|ABA92233.1| retrotransposon protein, putative, Ty3-gypsy subc...  1303   0.0  
emb|CAE04932.2| OSJNBa0017P10.9 [Oryza sativa Japonica Group]        1302   0.0  
gb|ABA97771.1| retrotransposon protein, putative, Ty3-gypsy subc...  1302   0.0  
emb|CAE04776.3| OSJNBb0115I21.3 [Oryza sativa Japonica Group]        1301   0.0  
gb|ABA95022.1| retrotransposon protein, putative, Ty3-gypsy subc...  1301   0.0  
dbj|BAH79971.1| hypothetical protein [Oryza sativa Indica Group]     1301   0.0  
dbj|BAH80069.1| putative retrotransposon protein [Oryza sativa I...  1300   0.0  
gb|ABB46774.2| retrotransposon protein, putative, Ty3-gypsy subc...  1300   0.0  
gb|AAM14695.1|AC097446_24 Putative polyprotein [Oryza sativa Jap...  1300   0.0  

>emb|CAN66189.1| hypothetical protein VITISV_006047 [Vitis vinifera]
          Length = 1573

 Score = 1444 bits (3737), Expect = 0.0
 Identities = 743/1418 (52%), Positives = 966/1418 (68%), Gaps = 44/1418 (3%)
 Frame = +1

Query: 1372 LQNFQRLRPPRFGGSSDPAVVEEWVLRTREILITMQCPRDQWVPVAAFQFDGDASHWWRS 1551
            ++ F  ++PP F G       E W+ R R IL+ +  P ++ V +A +     A  WW S
Sbjct: 207  MKRFMVMQPPSFNGEPSAEASEHWLRRMRRILVGLDIPEERRVGLATYMLVDKADFWWES 266

Query: 1552 ERNVLGDGPVEWADFERMFLDRFISETAREIKQQEFSGMVQGNLTVTDYELRFTRLSRYA 1731
             + V     + W +FER+FL ++  E A+  K+ EF  ++QG + V +YE RF+ LSR+A
Sbjct: 267  MKRVYDTEVMTWEEFERIFLGKYFGEVAKHAKRMEFEHLIQGTMLVLEYESRFSELSRFA 326

Query: 1732 LELIPTDLQKARRFFRGLRPYLRAKMSVIETTNYRDTVSRAQRVEREDMELQTSRRLTSR 1911
            L +I  + +KARRF +GLRP +R ++  +   +Y + V RA  VE++  E    R     
Sbjct: 327  LGMISEEGEKARRFQQGLRPIIRNRLVPLAIRDYSELVKRALLVEQDIDETNQIREQKGD 386

Query: 1912 PQASFPPRADPAKRPMYSRPSASVPTYSQYQTPTPSSYXXXXXXXXXXXXXXLTRQIPRS 2091
             +          +R   S         +Q     PS Y                 QI + 
Sbjct: 387  KKGK--------QRMGESSQGPQQRQRTQQFERRPSFYAGEG-------------QIAQR 425

Query: 2092 PASQRLIQAGPLTCYGCGEAGHMKRNCP-------------------------------- 2175
             A+ R+       CYGCG   H+ R CP                                
Sbjct: 426  AATNRV-------CYGCGAGDHLWRACPLRGAQXAQPQSQGSSQQQPMPQLPPAAQGTRT 478

Query: 2176 -----RLXXXXXXXXXXXXRPQ-GRVYALTHEEYQPSHEVMEGNLILSNMQVHVLIDTGS 2337
                 +             RP  GRV+ALT  E      ++EG +++ +  V VL DTG+
Sbjct: 479  TTMNSQTRSSQGSNARGRGRPAAGRVFALTPTEPDKDALLVEGMILVYSTWVRVLFDTGA 538

Query: 2338 SNSFISTRLASMLELDVENTGKILSLSTPLGNNTIPKSVCKNCVIRLVDQELSTDLILLE 2517
            ++SFIS   A+ L L  E    +L + +P+G N+    +CK CVI L D+ L+ DL +L+
Sbjct: 539  THSFISASCANALGLKSERVENLLLIESPMGTNSRVDRICKGCVITLADRALNVDLRILD 598

Query: 2518 LNDFDVILGMDWLVRNHAHVDCYSRIVTFKIP----GRPILKFMGFKNRIEKYLKSKLNN 2685
            +  +DVILGMDWL    A +DC+ R + F +P      P  +++  K  I     + L  
Sbjct: 599  MTGYDVILGMDWLAVYRAVIDCHRRRIIFCLPEGFESDPCYRYVLRKGSI-----NFLAC 653

Query: 2686 LTTEEKAVPELVEIPVVRDFRSLFPEELPGLPPIRAIEFSIDLIPGTAPISITPYRMAPA 2865
            L  +EKA  ++ EIPVVR F+ +FP+ELPGLPP R  +FSI++ PGT PIS++PYRMAP 
Sbjct: 654  LRGKEKAQKDITEIPVVRKFQDVFPDELPGLPPHREFDFSIEVYPGTDPISVSPYRMAPL 713

Query: 2866 ETRELKSQIDELTHLGFIRPSFSPWGAPVLFVKKKDGSFRLCIDYRRLNQVTIKNKYPLP 3045
            E +ELK+Q+DEL   GFIRPS SPWGAPVLFVKKKD + RLCI+YR+LN+VT+KNKYPLP
Sbjct: 714  ELKELKTQLDELLGKGFIRPSTSPWGAPVLFVKKKDDTLRLCIEYRKLNRVTVKNKYPLP 773

Query: 3046 RIEDLFDQLQGAQYFSKIDLRSGYHQLKIKEDDIPKTAFRTRLGHYEYLVMPFGLTNAPA 3225
            RI+DL               R+GYHQL+++EDD+ KTAFRTR G+YE+LVMPFGLTNAPA
Sbjct: 774  RIDDL---------------RTGYHQLRVREDDVSKTAFRTRYGNYEFLVMPFGLTNAPA 818

Query: 3226 AFMDLMNRVFWEYLDKFVIVFIDDILIYXXXXXXXXXXLKITLQTLQDHQLYAKFSKCEF 3405
            AFMDLMNRVF  YLD+FVIVF+DDILIY          L  TL TL+ HQLY K  K EF
Sbjct: 819  AFMDLMNRVFRAYLDRFVIVFVDDILIYSRSLEEHKQHLVTTLGTLRRHQLYGKLDKSEF 878

Query: 3406 WLKEVKFLGHVVSSKGVSVDPSKIEAVTSWKQPTSVAEIRSFLGLAGYYRRFVEGFSMIA 3585
            WL EV FLGHVVS  G++VD SK+EA+  W++PT+V E+RSFLGLAGYYRRFVE FS IA
Sbjct: 879  WLTEVNFLGHVVSEAGIAVDHSKVEAIQEWQRPTNVFEVRSFLGLAGYYRRFVEDFSRIA 938

Query: 3586 SPLTRLTQKNVKYEWDDRCEAAFQELKTRLTTAPVLIAPVPGESLVIYTDASGIGLGCVL 3765
            +P+T+LT+K VK++W++ CE AFQELK +LTTAPVL AP+ GE  +IY DAS +GLGCVL
Sbjct: 939  APMTQLTRKWVKFDWNEECENAFQELKQKLTTAPVLTAPISGELFMIYCDASTVGLGCVL 998

Query: 3766 MQNGKVIAYASRKLKTHEKNYPAHDLELASIVFSLKIWRHYLYGEKFELFSDHKSLKYIF 3945
            MQ GKV+AYASR+LK HE+NY AHDLELA++VF+LK W HYLYGEKFE++SDHKSLKYIF
Sbjct: 999  MQQGKVVAYASRQLKQHERNYLAHDLELAAMVFALKTWIHYLYGEKFEVYSDHKSLKYIF 1058

Query: 3946 SQKELNMRQRRWMEYLKDYDFTLHYHPGKANVVADALSRRKESVLAQMMLSEWHMLESVI 4125
            +QK+LN RQRRWME L+DYDF LHYHPGKANVVADALSR+    L  + L E+ M  +VI
Sbjct: 1059 TQKDLNSRQRRWMETLEDYDFALHYHPGKANVVADALSRKSYGQLFSLGLREFEMY-AVI 1117

Query: 4126 EFVFDSPKNEDRQHSYLAPLRLHNTLTQRIVESQNLDA--DVVEHCLKAGDSENHEWNIH 4299
            E  F+    ++ +   L  +     + QRIVE+Q  D   + V+  L AG+ + + W+++
Sbjct: 1118 ED-FELCLVQEGRGPCLYSISARPMVIQRIVEAQVHDEFLEKVKAQLVAGEIDEN-WSMY 1175

Query: 4300 ADGSIRFQNRLWIPTDEQLRKDILGEAHRSRYSIHPGGTKMYRDLRKHFWWPGMKKHIAQ 4479
             DGS+RF+ RL +P D +LR ++L +AHR++Y+IHPG TKMY+DL++ F W GMK+ IAQ
Sbjct: 1176 EDGSVRFKGRLCVPKDVELRNELLADAHRAKYTIHPGNTKMYQDLKRQFXWSGMKRDIAQ 1235

Query: 4480 YVNRCMTCQQVKAEHQRPAGLLQPLPVAEWKWEHVTMDFVTGLPKASDGLDAIWVIVDRL 4659
            +V  C  CQQVKAEHQRPA LLQPLP+ +WKW+++TMDFV GLP+     + +WVIVDRL
Sbjct: 1236 FVANCQICQQVKAEHQRPAELLQPLPIPKWKWDNITMDFVIGLPRTRSKKNGVWVIVDRL 1295

Query: 4660 TKSAHFLPIKMTHTVDRLSRLYIAEIVRLHGIPVSIVSDRDPRFTSQFWKSLQSALGTQL 4839
            TKSAHFL +K T +++ L++LYI EIVRLHGIPVSIVSDRDP+FTSQFW+SLQ ALGTQL
Sbjct: 1296 TKSAHFLAMKTTDSMNSLAKLYIQEIVRLHGIPVSIVSDRDPKFTSQFWQSLQRALGTQL 1355

Query: 4840 KFSTAFHPQTDGQSERVIQILEDMLRACVLDFGGQWKTHLPLVEFSYNNSFQSSIGMAPF 5019
             FST FHPQTDGQSERVIQILEDMLRACVLDFGG W  +LPL EF+YNN +QSSIGMAP+
Sbjct: 1356 NFSTVFHPQTDGQSERVIQILEDMLRACVLDFGGNWADYLPLAEFAYNNXYQSSIGMAPY 1415

Query: 5020 EALYGRPCRSPICWTEVGDTILMGPELVEETTEKIRMVQERIKAAQSRQKNYADKRRRPL 5199
            EALYGRPCRSP+CW E+G++ L+GPE+V+ETTEKI++++E++K AQ RQKNYADKRRRPL
Sbjct: 1416 EALYGRPCRSPLCWIEMGESHLLGPEIVQETTEKIQLIKEKLKTAQDRQKNYADKRRRPL 1475

Query: 5200 EFEVGDMVFLKISPKRGISRFGLKGKLKPRYVGPFEITERVGQVAYRLVLPSQLAQIHNV 5379
            EFE GD VF+K+SP+RGI RFG KGKL PR+VGPF+I +RVG V Y+L+LP QL+ +H+V
Sbjct: 1476 EFEEGDWVFVKVSPRRGIFRFGKKGKLAPRFVGPFQIDKRVGPVTYKLILPQQLSLVHDV 1535

Query: 5380 FHVSMLRKYEPDPSHILDWQSLQLEEDVSYEEGPVQII 5493
            FHVSMLRK  PDP+ ++D Q +Q+ ED SY E P++I+
Sbjct: 1536 FHVSMLRKCTPDPTWVVDLQDVQISEDTSYVEEPLRIL 1573


>ref|XP_007200265.1| hypothetical protein PRUPE_ppa015000mg [Prunus persica]
            gi|462395665|gb|EMJ01464.1| hypothetical protein
            PRUPE_ppa015000mg [Prunus persica]
          Length = 1493

 Score = 1418 bits (3671), Expect = 0.0
 Identities = 730/1411 (51%), Positives = 960/1411 (68%), Gaps = 19/1411 (1%)
 Frame = +1

Query: 1372 LQNFQRLRPPRFGGSSDPAVVEEWVLRTREILITMQCPRDQWVPVAAFQFDGDASHWWRS 1551
            ++  + L    F GS+DPA  E W+     I   ++CP +  V +A F   G+A HWW++
Sbjct: 74   IKRVKELGAKEFVGSTDPAEAESWITDVERIFEVLECPAEDRVRLATFLLKGNAYHWWKA 133

Query: 1552 -ERNVLGDGPVEWADFERMFLDRFISETAREIKQQEFSGMVQGNLTVTDYELRFTRLSRY 1728
             +R       + W +F+R+F ++F   + R  K+ EF  + QG+++V +YE +F  LSR+
Sbjct: 134  VKRGYENPAAINWEEFQRVFSEQFYPPSYRHAKKSEFLYLKQGSMSVMEYEHKFNELSRF 193

Query: 1729 ALELIPTDLQKARRFFRGLRPYLRAKMSVIETTNYRDTVSRAQRVEREDMEL--QTSRRL 1902
            A EL+ T+  + RRF  GL   ++A   VI    Y +  + A  VER   +L     RR 
Sbjct: 194  APELVATEEDRCRRFEEGLWWEIQA---VITANTYPNMRALAHAVERVSRKLGGNVGRRR 250

Query: 1903 TSRPQASFPPRADPAKRPMYSRPSASVPTYSQYQTPTPSSYXXXXXXXXXXXXXXLTRQI 2082
               P    P +  P+KR   S  SAS        + + S                L   +
Sbjct: 251  RDTPGIGGPSQG-PSKRGGSSSSSASGGWSEGRGSSSSSGRSGSRPAWTQYSGHSLQLAL 309

Query: 2083 PRS-PASQRLIQAGPLTCYGCGEAGHMKRNCPRLXXXXXXXXXXXXRPQGRVYALTHEEY 2259
            P   P +     +        G +G   R  P                Q RV+++T +E 
Sbjct: 310  PGLLPGTLAGSSSSKAPSSSRGRSGRQSRGQP-----------GRSTTQARVFSMTQQEA 358

Query: 2260 QPSHEVMEGNLILSNMQVHVLIDTGSSNSFISTRLASMLELDVENTGKILSLSTPLGNNT 2439
              + +V+ G + +      VLID G+++SF++      + +         S+S P G   
Sbjct: 359  YATPDVITGMIPIFGYLARVLIDPGATHSFVAHNFIPYISIRPTPITGSFSISLPTGEVL 418

Query: 2440 IPKSVCKNCVIRLVDQELSTDLILLELNDFDVILGMDWLVRNHAHVDCYSRIVTFKIPGR 2619
                V +NC +++ D  L  +LI L+L D D+ILGMDWL ++HA VDC+ + VT + PG+
Sbjct: 419  YADRVFRNCFVQVDDAWLEANLIPLDLVDLDIILGMDWLEKHHASVDCFRKEVTLRSPGQ 478

Query: 2620 PILKFMG--------------FKNRIEKYLKSKLNNLTTEEKAVPELVEIPVVRDFRSLF 2757
            P + F G               K  ++K  +  L ++    +    L +IPVV +F ++F
Sbjct: 479  PKVTFRGERRVLPTCLISAITAKKLLKKGYEGYLAHIIDTREITLNLEDIPVVCEFPNIF 538

Query: 2758 PEELPGLPPIRAIEFSIDLIPGTAPISITPYRMAPAETRELKSQIDELTHLGFIRPSFSP 2937
            P++LPGLPP R IEF+ID +PGT PI  TPYRMAPAE RELK Q+ EL  L FIRPS SP
Sbjct: 539  PDDLPGLPPKREIEFTIDFLPGTNPIYQTPYRMAPAELRELKIQLQELVDLRFIRPSVSP 598

Query: 2938 WGAPVLFVKKKDGSFRLCIDYRRLNQVTIKNKYPLPRIEDLFDQLQGAQYFSKIDLRSGY 3117
            WGAPVLFV+K+DG+ RLCIDYR+LN+VTI+N+YPLPRI+DLFDQL+GA+YFSKIDLRSGY
Sbjct: 599  WGAPVLFVRKQDGTMRLCIDYRQLNKVTIRNRYPLPRIDDLFDQLKGAKYFSKIDLRSGY 658

Query: 3118 HQLKIKEDDIPKTAFRTRLGHYEYLVMPFGLTNAPAAFMDLMNRVFWEYLDKFVIVFIDD 3297
            HQL+I+E+DIP TA RTR GHYE+LVMPFGLTNAPAAFMDLMNRVF  YLD FVIVFIDD
Sbjct: 659  HQLRIREEDIPNTALRTRYGHYEFLVMPFGLTNAPAAFMDLMNRVFRPYLDHFVIVFIDD 718

Query: 3298 ILIYXXXXXXXXXXLKITLQTLQDHQLYAKFSKCEFWLKEVKFLGHVVSSKGVSVDPSKI 3477
            IL+Y          L++ L+TL+  QLYAKFSKC+FWL  V FLGHV+S++G+ VDP K+
Sbjct: 719  ILVYSQTLEGHKKHLRVVLRTLRRKQLYAKFSKCQFWLDIVVFLGHVISAEGIYVDPQKV 778

Query: 3478 EAVTSWKQPTSVAEIRSFLGLAGYYRRFVEGFSMIASPLTRLTQKNVKYEWDDRCEAAFQ 3657
            EA+ +W Q TSV EIRSFLGLAGYYRRFVEGFS IA+PLTRLT+K++ +EW + CE +FQ
Sbjct: 779  EAIVNWVQSTSVTEIRSFLGLAGYYRRFVEGFSSIAAPLTRLTRKDIAFEWTEECEQSFQ 838

Query: 3658 ELKTRLTTAPVLIAPVPGESLVIYTDASGIGLGCVLMQNGKVIAYASRKLKTHEKNYPAH 3837
            ELK RLTTAPVL  P    + VIY+DAS  GLGCVLMQ+ +VIAYASR+LK HE+NYP H
Sbjct: 839  ELKKRLTTAPVLALPDNAGNFVIYSDASLQGLGCVLMQHDRVIAYASRQLKKHEQNYPVH 898

Query: 3838 DLELASIVFSLKIWRHYLYGEKFELFSDHKSLKYIFSQKELNMRQRRWMEYLKDYDFTLH 4017
            DLELA++VF+LKIWRHYLYGE  ++F+DHKSLKY F+Q+ELNMRQRRW+E +KDYD T+ 
Sbjct: 899  DLELAAVVFALKIWRHYLYGETCQIFTDHKSLKYFFTQRELNMRQRRWLELIKDYDCTIE 958

Query: 4018 YHPGKANVVADALSRRKESVLAQMMLSEWHMLESVIEFVFDSPKNE-DRQHSYLAPLRLH 4194
            Y+PG+ANVVADALSR+    L  +  +    L  ++E   D  + E  +Q   LA L + 
Sbjct: 959  YYPGRANVVADALSRKTTGSLTHLRTT---YLPLLVELRKDGVELEMTQQGGILASLHVR 1015

Query: 4195 NTLTQRIVESQNLDADVVEHCLKAGDSENHEWNIHADGSIRFQNRLWIPTDEQLRKDILG 4374
              L +RI+ +Q  D  +     +       ++ I  DG++    RL +P ++ L+++IL 
Sbjct: 1016 PILVERIIVAQLGDPTLCRIRGEVESGSRKDYAIRGDGALVTGTRLHVPKNDYLKREILE 1075

Query: 4375 EAHRSRYSIHPGGTKMYRDLRKHFWWPGMKKHIAQYVNRCMTCQQVKAEHQRPAGLLQPL 4554
            EAH S Y++HPG TKMYR LR+++ WP MK  IA+YV+RC+ CQQVKAE Q+P+GL+QPL
Sbjct: 1076 EAHCSTYTMHPGSTKMYRTLREYYSWPHMKGDIAKYVSRCLICQQVKAERQKPSGLMQPL 1135

Query: 4555 PVAEWKWEHVTMDFVTGLPKASDGLDAIWVIVDRLTKSAHFLPIKMTHTVDRLSRLYIAE 4734
            P+ EWKWE +TMDFV  LP+ S G D IWVIVDRLTKS HFLPIK T+++ +L++L++ E
Sbjct: 1136 PIPEWKWERITMDFVFKLPRTSKGHDGIWVIVDRLTKSTHFLPIKETYSLTKLAKLFVDE 1195

Query: 4735 IVRLHGIPVSIVSDRDPRFTSQFWKSLQSALGTQLKFSTAFHPQTDGQSERVIQILEDML 4914
            IVRLHG PVSIVSDRD RFTS+FWK LQ A+GT+L+FSTAFHPQTDGQSER IQ LEDML
Sbjct: 1196 IVRLHGAPVSIVSDRDARFTSRFWKCLQEAMGTRLQFSTAFHPQTDGQSERTIQTLEDML 1255

Query: 4915 RACVLDFGGQWKTHLPLVEFSYNNSFQSSIGMAPFEALYGRPCRSPICWTEVGDTILMGP 5094
            R+CVL     W THL LVEF+YNNS+ +SI MAP+EALYGR CR+PICW EVGD  L   
Sbjct: 1256 RSCVLQMKDSWDTHLALVEFAYNNSYHASIKMAPYEALYGRQCRTPICWNEVGDKKLEKV 1315

Query: 5095 ELVEETTEKIRMVQERIKAAQSRQKNYADKRRRPLEFEVGDMVFLKISPKRGISRFGLKG 5274
            + ++ TTEK++M++E++K AQ RQK+YAD R + LEF VGD VFLK+SP +G+ RFG +G
Sbjct: 1316 DSIQATTEKVKMIKEKLKIAQDRQKSYADNRSKDLEFAVGDWVFLKLSPWKGVMRFGKRG 1375

Query: 5275 KLKPRYVGPFEITERVGQVAYRLVLPSQLAQIHNVFHVSMLRKYEPDPSHILDWQSLQLE 5454
            KL PRY+GP+EITER+G VAYRL LP++L+Q+H+VFHVSMLRKY  DPSHIL++Q +++E
Sbjct: 1376 KLSPRYIGPYEITERIGPVAYRLALPAELSQVHDVFHVSMLRKYMSDPSHILEYQPVEVE 1435

Query: 5455 EDVSYEEGPVQIIGRKEKMLRSRVIPLVKVL 5547
            ED+SYEE PVQI+ RKE+MLRSR IP+VKVL
Sbjct: 1436 EDLSYEEQPVQILDRKEQMLRSRFIPVVKVL 1466


>emb|CAH65904.1| H0207B04.5 [Oryza sativa Indica Group]
          Length = 1481

 Score = 1313 bits (3398), Expect = 0.0
 Identities = 677/1403 (48%), Positives = 913/1403 (65%), Gaps = 12/1403 (0%)
 Frame = +1

Query: 1372 LQNFQRLRPPRFGGSSDPAVVEEWVLRTREILITMQCPRDQWVPVAAFQFDGDASHWWRS 1551
            L +F R+RPP F  +++P    +W+    + L  +QC   + V  A+ Q  G A+ WW  
Sbjct: 63   LADFLRVRPPTFSSTTNPVEAGDWLHAVEKKLDLIQCTEQEKVSFASHQLHGPAAEWWDH 122

Query: 1552 ERNV-LGDGPVEWADFERMFLDRFISETAREIKQQEFSGMVQGNLTVTDYELRFTRLSRY 1728
             R   +G  P+ W +F   F    I      +K++EF  + QG+ +VT+Y   F RL+RY
Sbjct: 123  FRQGRVGGEPITWQEFTAAFKKTHIPTGVVALKKREFRALNQGSRSVTEYLHDFNRLARY 182

Query: 1729 ALELIPTDLQKARRFFRGLRPYLRAKMSVIETTNYRDTVSRAQRVEREDMELQTSRRLTS 1908
            A E + TD ++  +F  GL   L   +   E  +++  V +A R E +   ++  +R   
Sbjct: 183  APEDVRTDEERQEKFLEGLNDELSYTLMSTEFRDFQQLVDKAIRQEDKYNRMEQKKRRA- 241

Query: 1909 RPQASFPPRADPAKRPMYSRPSASVPTYSQYQT-----PTPSSYXXXXXXXXXXXXXXLT 2073
               A F  +    +RP     S  VP+Y Q  +     P    Y              + 
Sbjct: 242  ---AQFKAQQGSNQRPRLVTGS-QVPSYPQVGSSSVVRPQRQFYNNNTGNRGNGNRNVVV 297

Query: 2074 RQIPRSPASQ--RLIQAG-PLTCYGCGEAGHMKRNCP---RLXXXXXXXXXXXXRPQGRV 2235
            R       +Q  R  Q G P+ C+ CG+ GH    CP   R+             P+ RV
Sbjct: 298  RPAVTPTQNQPVRKEQGGKPVICFNCGDPGHYADKCPKPRRVKNAPASTNSNVPAPKARV 357

Query: 2236 YALTHEEYQPSHEVMEGNLILSNMQVHVLIDTGSSNSFISTRLASMLELDVENTGKILSL 2415
              +   E Q + +V+ G   ++++   VL D+G+++SF+S   AS   ++V + G+ L +
Sbjct: 358  NHVAAAEAQNAPDVVLGTFPVNSIPATVLFDSGATHSFLSKSFASKHGMEVVSLGRPLLV 417

Query: 2416 STPLGNNTIPKSVCKNCVIRLVDQELSTDLILLELNDFDVILGMDWLVRNHAHVDCYSRI 2595
            +TP GN       C +  I + +    + LILLE  D DVILGMDWL R+   +DC +R 
Sbjct: 418  NTP-GNQVFSTQYCPSVTIEIEEVPFPSSLILLESKDLDVILGMDWLSRHRGVIDCANRK 476

Query: 2596 VTFKIPGRPILKFMGFKNRIEKYLKSKLNNLTTEEKAVPELVEIPVVRDFRSLFPEELPG 2775
            VT        + F     +    + +++            L EIP+V+D+  +FPE+LPG
Sbjct: 477  VTLTNSNGETVSFFASSPKSHGVILNQV-----------ALQEIPIVQDYPDVFPEDLPG 525

Query: 2776 LPPIRAIEFSIDLIPGTAPISITPYRMAPAETRELKSQIDELTHLGFIRPSFSPWGAPVL 2955
            +PP R IEF IDL+PGT PI   PYRMA  E  E+K Q+D+L   G+IRPS  PWGAPV+
Sbjct: 526  MPPKRDIEFRIDLVPGTNPIHKRPYRMAANELAEVKKQVDDLLQKGYIRPSTLPWGAPVI 585

Query: 2956 FVKKKDGSFRLCIDYRRLNQVTIKNKYPLPRIEDLFDQLQGAQYFSKIDLRSGYHQLKIK 3135
            FV+KKD + R+C+DYR LN+VTIKNKYPLPRI+DLFDQL+GA  FSKIDLRSGYHQL+I+
Sbjct: 586  FVEKKDHTQRMCVDYRALNEVTIKNKYPLPRIDDLFDQLEGATVFSKIDLRSGYHQLRIR 645

Query: 3136 EDDIPKTAFRTRLGHYEYLVMPFGLTNAPAAFMDLMNRVFWEYLDKFVIVFIDDILIYXX 3315
            E+DIPKTAF TR G +E  VM FGLTNAPA FM+LMN+VF EYLDKFV+VFIDDILIY  
Sbjct: 646  EEDIPKTAFTTRYGLFECTVMSFGLTNAPAFFMNLMNKVFMEYLDKFVVVFIDDILIYSK 705

Query: 3316 XXXXXXXXLKITLQTLQDHQLYAKFSKCEFWLKEVKFLGHVVSSKGVSVDPSKIEAVTSW 3495
                    L++ L+ L++HQLYAKFSKCEFWL EVKFLGHV+SS GV+VDPS +E+V SW
Sbjct: 706  TKEEHEEHLRLALEKLREHQLYAKFSKCEFWLSEVKFLGHVISSGGVAVDPSNVESVLSW 765

Query: 3496 KQPTSVAEIRSFLGLAGYYRRFVEGFSMIASPLTRLTQKNVKYEWDDRCEAAFQELKTRL 3675
            KQP +V+E+RSFLGLAGYYRRF+E FS IA P+TRL QK VK++W + CE +FQELK RL
Sbjct: 766  KQPKTVSEVRSFLGLAGYYRRFIENFSKIARPMTRLLQKEVKFKWTEDCERSFQELKERL 825

Query: 3676 TTAPVLIAPVPGESLVIYTDASGIGLGCVLMQNGKVIAYASRKLKTHEKNYPAHDLELAS 3855
             TAPVLI P   +   +Y DAS +GLGCVLMQ GKV+AYASR+L+ HE NYP HDLELA+
Sbjct: 826  VTAPVLILPDSRKGFQVYCDASRLGLGCVLMQEGKVVAYASRQLRPHENNYPTHDLELAA 885

Query: 3856 IVFSLKIWRHYLYGEKFELFSDHKSLKYIFSQKELNMRQRRWMEYLKDYDFTLHYHPGKA 4035
            +V +LKIWRHYLYG + E+++DHKSLKYIF+Q +LNMRQRRW+E +KDYD  +HYHPGKA
Sbjct: 886  VVHALKIWRHYLYGNRTEIYTDHKSLKYIFTQPDLNMRQRRWLELIKDYDMEIHYHPGKA 945

Query: 4036 NVVADALSRRKESVLAQMMLSEWHMLESVIEFVFDSPKNEDRQHSYLAPLRLHNTLTQRI 4215
            NVVADALSR+    +++     W + +      F+          ++A L    TL  +I
Sbjct: 946  NVVADALSRKSYCNMSEGRSLPWELCQE-----FEKLNLGIVSKGFMAALEAKPTLFDQI 1000

Query: 4216 VESQNLDADVVEHCLKAGDSENHEWNIHADGSIRFQNRLWIPTDEQLRKDILGEAHRSRY 4395
             E+Q  D D+ E        +   +     G++    R+ +P +++L+  I+ EAH + Y
Sbjct: 1001 REAQVNDPDIQEIKKNMRRGKAVGFVEDEQGTVWLGERICVPENKELKVTIMKEAHETLY 1060

Query: 4396 SIHPGGTKMYRDLRKHFWWPGMKKHIAQYVNRCMTCQQVKAEHQRPAGLLQPLPVAEWKW 4575
            SIHPG TKMY+DL++ FWW  M++ IA+YV  C  CQ+VKAEHQ+PAGLLQPL + EWKW
Sbjct: 1061 SIHPGSTKMYQDLKQQFWWASMRREIAEYVALCDECQRVKAEHQKPAGLLQPLKIPEWKW 1120

Query: 4576 EHVTMDFVTGLPKASDGLDAIWVIVDRLTKSAHFLPIKMTHTVDRLSRLYIAEIVRLHGI 4755
            E + MDF+TGLP+ S G D+IWV+VDRLTK AHF+P+K T+T  +L+ LY+A +V LHG+
Sbjct: 1121 EEIGMDFITGLPRTSAGHDSIWVVVDRLTKVAHFIPVKTTYTGHKLAELYMARVVCLHGV 1180

Query: 4756 PVSIVSDRDPRFTSQFWKSLQSALGTQLKFSTAFHPQTDGQSERVIQILEDMLRACVLDF 4935
            P  IVSDR  +FTS+FW+ LQS LGT+L FSTA+HPQTDGQ+ERV +ILEDMLRACVLDF
Sbjct: 1181 PKKIVSDRGSQFTSKFWQKLQSELGTRLNFSTAYHPQTDGQTERVNKILEDMLRACVLDF 1240

Query: 4936 GGQWKTHLPLVEFSYNNSFQSSIGMAPFEALYGRPCRSPICWTEVGDTILMGPELVEETT 5115
            GG W  +LP  EFSYNNS+Q+S+ M+P EALYGR CR+P+ W + G+  + G +++ E  
Sbjct: 1241 GGSWDKNLPYAEFSYNNSYQASLQMSPNEALYGRKCRTPLLWDQTGERQVFGTDILREAE 1300

Query: 5116 EKIRMVQERIKAAQSRQKNYADKRRRPLEFEVGDMVFLKISPKRGISRFGLKGKLKPRYV 5295
            EK++++QER++ AQSRQK+YAD RRR L FE GD V+L+++P RG+ RF  KGKL PR+V
Sbjct: 1301 EKVKIIQERLRVAQSRQKSYADNRRRDLVFEEGDYVYLRVTPLRGVHRFQTKGKLAPRFV 1360

Query: 5296 GPFEITERVGQVAYRLVLPSQLAQIHNVFHVSMLRKYEPDPSHILDWQSLQLEEDVSYEE 5475
            GPF+I  R G+VAY+L LP  +A IH+VFHVS L+K    P+   D   ++L+ED++Y E
Sbjct: 1361 GPFKIVSRRGEVAYQLELPPSMAGIHDVFHVSQLKKCLRVPTEEADPSRIELQEDLTYVE 1420

Query: 5476 GPVQIIGRKEKMLRSRVIPLVKV 5544
             PV+I+   E+  R+RVI   KV
Sbjct: 1421 KPVRILEVSERKTRNRVIRFCKV 1443


>dbj|BAH80025.1| putative retrotransposon protein [Oryza sativa Indica Group]
          Length = 1727

 Score = 1310 bits (3389), Expect = 0.0
 Identities = 676/1405 (48%), Positives = 914/1405 (65%), Gaps = 14/1405 (0%)
 Frame = +1

Query: 1372 LQNFQRLRPPRFGGSSDPAVVEEWVLRTREILITMQCPRDQWVPVAAFQFDGDASHWWRS 1551
            L +F R+RPP F  +++P    +W+    + L  +QC   + V  A+ Q  G A+ WW  
Sbjct: 309  LADFLRVRPPTFSSTTNPVEAGDWLHAVEKKLDLIQCTEQEKVSFASHQLHGPAAEWWDH 368

Query: 1552 ERNVLGDG-PVEWADFERMFLDRFISETAREIKQQEFSGMVQGNLTVTDYELRFTRLSRY 1728
             R     G P+ W +F   F    I      +K++EF  + QG+ +VT+Y   F RL+RY
Sbjct: 369  FRQGRAGGEPITWQEFTAAFKKTHIPTGVVALKKREFRALSQGSRSVTEYLHDFNRLARY 428

Query: 1729 ALELIPTDLQKARRFFRGLRPYLRAKMSVIETTNYRDTVSRAQRVEREDMELQTSRRLTS 1908
            A E + TD ++  +F  GL   L   +   E  +++  V +A R E +   ++  +R   
Sbjct: 429  APEDVRTDEERQEKFLEGLNDELSYTLMSTEFRDFQQLVDKAIRQEDKYNRMEQKKRRA- 487

Query: 1909 RPQASFPPRADPAKRPMYSRPSASVPTYSQYQT-----PTPSSYXXXXXXXXXXXXXXLT 2073
               A F  +    +RP        VP+Y Q  +     P    Y              + 
Sbjct: 488  ---AQFKAQQGSNQRPRLIT-GPQVPSYPQGGSSSVVRPQRQFYNNNTGNRGNDNRNVVA 543

Query: 2074 RQIPRSPASQRLIQ---AGPLTCYGCGEAGHMKRNCP---RLXXXXXXXXXXXXRPQGRV 2235
            R    S  +Q + +   + P+ C+ CG+ GH    CP   R+             P+ RV
Sbjct: 544  RPAATSTQNQSVRKDQGSKPVICFNCGDPGHYADKCPKPRRVKNAPVPNNSNASAPKARV 603

Query: 2236 YALTHEEYQPSHEVMEGNLILSNMQVHVLIDTGSSNSFISTRLASMLELDVENTGKILSL 2415
              +   E Q + +V+ G   ++++   VL D+G+++SF+S   A+   ++V + G+ L +
Sbjct: 604  NHVAAAEAQNAPDVVLGTFPVNSIPATVLFDSGATHSFLSKSFATKHGMEVVSLGRPLLV 663

Query: 2416 STPLGNNTIPKSVCKNCVIRLVDQELSTDLILLELNDFDVILGMDWLVRNHAHVDCYSRI 2595
            +TP GN       C +  I + +    + LILLE  D DVILGMDWL R+   +DC +R 
Sbjct: 664  NTP-GNQVSSTRYCPSVTIEIEEVLFPSSLILLESKDLDVILGMDWLSRHRGVIDCANRK 722

Query: 2596 VTFKIPGRPILKFMGFKNRIEKYLKSKLNNLTTEEKAVPELVEIPVVRDFRSLFPEELPG 2775
            VT        + F     +    + +++            L EIP+V+D+  +FPE+LPG
Sbjct: 723  VTLTNSNGETVSFFASSPKSHGVVLNQV-----------ALQEIPIVQDYPDVFPEDLPG 771

Query: 2776 LPPIRAIEFSIDLIPGTAPISITPYRMAPAETRELKSQIDELTHLGFIRPSFSPWGAPVL 2955
            +PP R IEF IDL+PGT PI   PYRMA  E  E+K Q+D+L   G+IRPS SPWGAPV+
Sbjct: 772  MPPKRDIEFRIDLVPGTNPIHKRPYRMAANELAEVKKQVDDLLQKGYIRPSTSPWGAPVI 831

Query: 2956 FVKKKDGSFRLCIDYRRLNQVTIKNKYPLPRIEDLFDQLQGAQYFSKIDLRSGYHQLKIK 3135
            FV+KKD + R+C+DYR LN+VTIKNKYPLPRI+DLFDQL+GA  FSKIDLRSGYHQL+I+
Sbjct: 832  FVEKKDHTQRMCVDYRALNEVTIKNKYPLPRIDDLFDQLEGATVFSKIDLRSGYHQLRIR 891

Query: 3136 EDDIPKTAFRTRLGHYEYLVMPFGLTNAPAAFMDLMNRVFWEYLDKFVIVFIDDILIYXX 3315
            E+DIPKTAF TR G +E  VM FGLTNAPA FM+LMN+VF EYLDKFV+VFIDDILIY  
Sbjct: 892  EEDIPKTAFTTRYGLFECTVMSFGLTNAPAFFMNLMNKVFMEYLDKFVVVFIDDILIYSK 951

Query: 3316 XXXXXXXXLKITLQTLQDHQLYAKFSKCEFWLKEVKFLGHVVSSKGVSVDPSKIEAVTSW 3495
                    L++ L+ L++HQLYAKFSKCEFWL EVKFLGHV+SS GV+VDPS +E+V SW
Sbjct: 952  TKEEHEEHLRLALEKLREHQLYAKFSKCEFWLSEVKFLGHVISSGGVAVDPSNVESVLSW 1011

Query: 3496 KQPTSVAEIRSFLGLAGYYRRFVEGFSMIASPLTRLTQKNVKYEWDDRCEAAFQELKTRL 3675
            KQP +V+E+RSFLGLAGYYRRF+E FS IA P+TRL QK+ KY+W + CE +FQELK RL
Sbjct: 1012 KQPKTVSEVRSFLGLAGYYRRFIENFSKIARPMTRLLQKDGKYKWTEDCERSFQELKKRL 1071

Query: 3676 TTAPVLIAPVPGESLVIYTDASGIGLGCVLMQNGKVIAYASRKLKTHEKNYPAHDLELAS 3855
             +APVLI P   +   +Y DAS  GLGCVLMQ GKV+AYASR+L+ HE NYP HDLELA+
Sbjct: 1072 VSAPVLILPDSRKDFQVYCDASRHGLGCVLMQEGKVVAYASRQLRPHENNYPTHDLELAA 1131

Query: 3856 IVFSLKIWRHYLYGEKFELFSDHKSLKYIFSQKELNMRQRRWMEYLKDYDFTLHYHPGKA 4035
            +V +LKIWRHYLYG + E+++DHKSLKYIF+Q +LNMRQRRW+E +KDYD  +HYHPGKA
Sbjct: 1132 VVHALKIWRHYLYGNRTEIYTDHKSLKYIFTQPDLNMRQRRWLELIKDYDMEIHYHPGKA 1191

Query: 4036 NVVADALSRRKESVLAQMMLSEWHMLESVIEFVFDSPKNEDRQHSYLAPLRLHNTLTQRI 4215
            NVVADALSR+    +++     W + +      F+          ++A L    TL  +I
Sbjct: 1192 NVVADALSRKSYCNMSEGRCLPWELCQE-----FEKLNLGIVSKGFVATLEAKPTLFDQI 1246

Query: 4216 VESQNLDADVVEHCLKAGDSENHEWNIHAD--GSIRFQNRLWIPTDEQLRKDILGEAHRS 4389
             E+Q  D D+ E  +K             D  G++    R+ +P +++L+  I+ EAH +
Sbjct: 1247 REAQVNDPDIQE--IKKNMRRGKAIGFVEDERGTVWLGERICVPENKELKDTIMKEAHET 1304

Query: 4390 RYSIHPGGTKMYRDLRKHFWWPGMKKHIAQYVNRCMTCQQVKAEHQRPAGLLQPLPVAEW 4569
             YSIHPG TKMY+DL++ FWW  M++ IA+YV  C  CQ+VKAEHQRPAGLLQPL + EW
Sbjct: 1305 LYSIHPGSTKMYQDLKQQFWWASMRREIAEYVALCDVCQRVKAEHQRPAGLLQPLKIPEW 1364

Query: 4570 KWEHVTMDFVTGLPKASDGLDAIWVIVDRLTKSAHFLPIKMTHTVDRLSRLYIAEIVRLH 4749
            KWE + MDF+TGLP+ S G D+IWV+VDRLTK AHF+P+K T+T  +L+ LY+A +V LH
Sbjct: 1365 KWEEIGMDFITGLPRTSAGHDSIWVVVDRLTKVAHFIPVKTTYTGHKLAELYMARVVCLH 1424

Query: 4750 GIPVSIVSDRDPRFTSQFWKSLQSALGTQLKFSTAFHPQTDGQSERVIQILEDMLRACVL 4929
            G+P  IVSDR  +FTS+FW+ LQS LGT+L FSTA+HPQTDGQ+ERV QILEDMLRACVL
Sbjct: 1425 GVPKKIVSDRGSQFTSKFWQKLQSELGTRLNFSTAYHPQTDGQTERVNQILEDMLRACVL 1484

Query: 4930 DFGGQWKTHLPLVEFSYNNSFQSSIGMAPFEALYGRPCRSPICWTEVGDTILMGPELVEE 5109
            DFGG W  +LP  EFSYNNS+Q+S+ M+P EALYGR CR+P+ W ++G+  + G +++ E
Sbjct: 1485 DFGGSWDKNLPYPEFSYNNSYQASLQMSPNEALYGRKCRTPLLWDQIGERQVFGTDILRE 1544

Query: 5110 TTEKIRMVQERIKAAQSRQKNYADKRRRPLEFEVGDMVFLKISPKRGISRFGLKGKLKPR 5289
              EK++++Q+R++ AQSRQK+YAD RRR L FE GD V+L+++P RG+ RF  KGKL PR
Sbjct: 1545 AEEKVKIIQQRLRVAQSRQKSYADNRRRDLTFEEGDYVYLRVTPLRGVHRFQTKGKLAPR 1604

Query: 5290 YVGPFEITERVGQVAYRLVLPSQLAQIHNVFHVSMLRKYEPDPSHILDWQSLQLEEDVSY 5469
            +VGPF+I  R G+VAY+L LP  +A IH+VFHVS L+K    P+   D   ++L+ED++Y
Sbjct: 1605 FVGPFKIVSRRGEVAYQLELPPSMAGIHDVFHVSQLKKCLRVPTEEADPDRIELQEDLTY 1664

Query: 5470 EEGPVQIIGRKEKMLRSRVIPLVKV 5544
             E PV+I+   E+  R+RVI   KV
Sbjct: 1665 VEKPVRILEVSERKTRNRVIRFCKV 1689


>gb|ABA97812.1| retrotransposon protein, putative, Ty3-gypsy subclass [Oryza sativa
            Japonica Group]
          Length = 1702

 Score = 1309 bits (3387), Expect = 0.0
 Identities = 674/1399 (48%), Positives = 909/1399 (64%), Gaps = 8/1399 (0%)
 Frame = +1

Query: 1372 LQNFQRLRPPRFGGSSDPAVVEEWVLRTREILITMQCPRDQWVPVAAFQFDGDASHWWRS 1551
            L +F R+RPP F  +++P    +W+    + L  +QC   + V  A+ Q  G A+ WW  
Sbjct: 284  LADFLRVRPPTFSSTTNPVEAGDWLHAVEKKLDLIQCTEQEKVSFASHQLHGPAAEWWDH 343

Query: 1552 ERNVLGDG-PVEWADFERMFLDRFISETAREIKQQEFSGMVQGNLTVTDYELRFTRLSRY 1728
             R    +G P+ W +F   F    I      +K++EF  + QG+ +VT+Y   F RL+RY
Sbjct: 344  FRQGRAEGEPITWQEFTAAFKKTHIPAGVVALKKREFRALNQGSRSVTEYLHDFNRLARY 403

Query: 1729 ALELIPTDLQKARRFFRGLRPYLRAKMSVIETTNYRDTVSRAQRVEREDMELQTSRRLTS 1908
            A E + TD ++  +F  GL   L   +   +  +++  V +A R E +   ++  +R  +
Sbjct: 404  APEDVRTDEERQEKFLEGLNDELSYALMSTDFRDFQQLVDKAIRQEDKYNRMEQKKRRAA 463

Query: 1909 RPQASFPPRADPAKRPMYSRPSASVPTYSQYQTPTPSSYXXXXXXXXXXXXXXLTRQIPR 2088
            + +A       P        PS      S    P    Y              + R    
Sbjct: 464  QFKAQQGSNQRPRLVIGPQAPSYPQGGSSSVIRPQRQFYNNNTGNRGNDNRNVVARPAA- 522

Query: 2089 SPASQRLIQ----AGPLTCYGCGEAGHMKRNCP---RLXXXXXXXXXXXXRPQGRVYALT 2247
            +PA  + ++    + P+ C+ CG+ GH    CP   R+             P+ RV  + 
Sbjct: 523  TPAQNQPVRKEQGSKPVVCFNCGDPGHYADKCPKPRRVKNAPAPNNSNVPVPKARVNHVV 582

Query: 2248 HEEYQPSHEVMEGNLILSNMQVHVLIDTGSSNSFISTRLASMLELDVENTGKILSLSTPL 2427
              E Q +  V+ G   ++++   VL D+G+++SF+S   AS   ++V + G+ L ++TP 
Sbjct: 583  AAEAQNAPYVVLGTFPVNSIPATVLFDSGATHSFLSKSFASNHGMEVVSLGRPLLVNTP- 641

Query: 2428 GNNTIPKSVCKNCVIRLVDQELSTDLILLELNDFDVILGMDWLVRNHAHVDCYSRIVTFK 2607
            GN       C +  I + +    + LILLE  D DVILGMDWL R+   +DC +R VT  
Sbjct: 642  GNQVFSTQYCPSATIEIEEVPFPSSLILLESKDLDVILGMDWLSRHRGVIDCVNRKVTLT 701

Query: 2608 IPGRPILKFMGFKNRIEKYLKSKLNNLTTEEKAVPELVEIPVVRDFRSLFPEELPGLPPI 2787
                  + F             K + +   + A   L EIP+V+D+  +FPE+LPGLPP 
Sbjct: 702  SSNGETVSFF--------VSSPKSHGVNLNQVA---LQEIPIVQDYPDVFPEDLPGLPPK 750

Query: 2788 RAIEFSIDLIPGTAPISITPYRMAPAETRELKSQIDELTHLGFIRPSFSPWGAPVLFVKK 2967
            R IEF IDL+PGT PI   PYRMA  E  E+K Q+D+L   G+IRPS SPWGAPV+FV+K
Sbjct: 751  RDIEFRIDLVPGTNPIHKRPYRMAANELAEVKRQVDDLLQKGYIRPSTSPWGAPVIFVEK 810

Query: 2968 KDGSFRLCIDYRRLNQVTIKNKYPLPRIEDLFDQLQGAQYFSKIDLRSGYHQLKIKEDDI 3147
            KD + R+C+DYR LN+VTIKNKYPLPRI+DLFDQL+GA  FSKIDLRSGYHQL+I+E+DI
Sbjct: 811  KDHTQRMCVDYRALNEVTIKNKYPLPRIDDLFDQLKGATVFSKIDLRSGYHQLRIREEDI 870

Query: 3148 PKTAFRTRLGHYEYLVMPFGLTNAPAAFMDLMNRVFWEYLDKFVIVFIDDILIYXXXXXX 3327
            PKTAF TR G +E  VM FGLTNAPA FM+LMN+VF EYLDKFV+VFIDDILIY      
Sbjct: 871  PKTAFTTRYGLFECTVMSFGLTNAPAFFMNLMNKVFMEYLDKFVVVFIDDILIYSKTKEE 930

Query: 3328 XXXXLKITLQTLQDHQLYAKFSKCEFWLKEVKFLGHVVSSKGVSVDPSKIEAVTSWKQPT 3507
                L++ L+ L++HQLYAKFSKCEFWL EVKFLGHV+SS GV+VDPS +E+V SWKQP 
Sbjct: 931  HEEHLRLALEKLREHQLYAKFSKCEFWLSEVKFLGHVISSGGVAVDPSNVESVLSWKQPK 990

Query: 3508 SVAEIRSFLGLAGYYRRFVEGFSMIASPLTRLTQKNVKYEWDDRCEAAFQELKTRLTTAP 3687
            +V+EIRSFLGLA YYRRF+E FS IA P+TRL QK VKY+W + CE +FQELK RL TAP
Sbjct: 991  TVSEIRSFLGLARYYRRFIENFSKIARPMTRLLQKEVKYKWTEDCERSFQELKKRLVTAP 1050

Query: 3688 VLIAPVPGESLVIYTDASGIGLGCVLMQNGKVIAYASRKLKTHEKNYPAHDLELASIVFS 3867
            VLI P   +   +Y DAS  GLGCVLMQ GKV+AYASR+L+ HE NYP HDLELA++V +
Sbjct: 1051 VLILPNSRKGFQVYCDASRHGLGCVLMQEGKVVAYASRQLRPHENNYPTHDLELAAVVHA 1110

Query: 3868 LKIWRHYLYGEKFELFSDHKSLKYIFSQKELNMRQRRWMEYLKDYDFTLHYHPGKANVVA 4047
            LKIWRHYL+G + E+++DHKSLKYIF+Q +LNMRQRRW+E +KDYD  +HYHPGKANVVA
Sbjct: 1111 LKIWRHYLFGNRTEMYTDHKSLKYIFTQPDLNMRQRRWLELIKDYDMEIHYHPGKANVVA 1170

Query: 4048 DALSRRKESVLAQMMLSEWHMLESVIEFVFDSPKNEDRQHSYLAPLRLHNTLTQRIVESQ 4227
            DALSR+    +++     W + +      F+          ++A L    TL  ++ E+Q
Sbjct: 1171 DALSRKSYCNMSEGRRLPWKLCQE-----FEKLNLGIVSKGFVATLEAQPTLFDQVREAQ 1225

Query: 4228 NLDADVVEHCLKAGDSENHEWNIHADGSIRFQNRLWIPTDEQLRKDILGEAHRSRYSIHP 4407
              D D+ E        +   +     G++    R+ +P +++L+  I+ EAH + YSIHP
Sbjct: 1226 VNDPDIQEIKKNMRRGKAIGYVEDEQGTVWLGERICVPENKELKDTIMKEAHETLYSIHP 1285

Query: 4408 GGTKMYRDLRKHFWWPGMKKHIAQYVNRCMTCQQVKAEHQRPAGLLQPLPVAEWKWEHVT 4587
            G TKMY+DL++ FWW  M++ IA+YV  C  CQ+VKAEHQ+PAGLLQPL + EWKWE + 
Sbjct: 1286 GSTKMYQDLKQQFWWASMRREIAEYVALCDVCQRVKAEHQKPAGLLQPLKIPEWKWEEIG 1345

Query: 4588 MDFVTGLPKASDGLDAIWVIVDRLTKSAHFLPIKMTHTVDRLSRLYIAEIVRLHGIPVSI 4767
            MDF+TGLP+ S G D+IWV+VDRLTK AHF+P+K T+T ++L+ LY+A +V LHG+P  I
Sbjct: 1346 MDFITGLPRTSAGHDSIWVVVDRLTKVAHFIPVKTTYTGNKLAELYMARVVCLHGVPKKI 1405

Query: 4768 VSDRDPRFTSQFWKSLQSALGTQLKFSTAFHPQTDGQSERVIQILEDMLRACVLDFGGQW 4947
            VSDR  +FTS+FW+ LQ  +GT+L FSTA+HPQTDGQ+ERV QILEDMLRACVLDFGG W
Sbjct: 1406 VSDRGSQFTSKFWQKLQVEMGTRLNFSTAYHPQTDGQTERVNQILEDMLRACVLDFGGSW 1465

Query: 4948 KTHLPLVEFSYNNSFQSSIGMAPFEALYGRPCRSPICWTEVGDTILMGPELVEETTEKIR 5127
              +LP  EFSYNNS+Q+S+ MAP+EALYGR CR+PI W + G+  + G +++ E  EK++
Sbjct: 1466 DKNLPYAEFSYNNSYQASLQMAPYEALYGRKCRTPILWDQTGERQVFGTDILREAEEKVK 1525

Query: 5128 MVQERIKAAQSRQKNYADKRRRPLEFEVGDMVFLKISPKRGISRFGLKGKLKPRYVGPFE 5307
            ++QER++ AQSRQK+YAD RRR L FE GD V+L+++P RG+ RF  KGKL PR+VGPF+
Sbjct: 1526 IIQERLRVAQSRQKSYADNRRRDLAFEEGDYVYLRVTPLRGVHRFQTKGKLAPRFVGPFK 1585

Query: 5308 ITERVGQVAYRLVLPSQLAQIHNVFHVSMLRKYEPDPSHILDWQSLQLEEDVSYEEGPVQ 5487
            I  R G+VAY+L LP  +A IH+VFHVS L+K    P+   D   ++L+ED++Y E PV+
Sbjct: 1586 IVSRRGEVAYQLELPPSMAGIHDVFHVSQLKKCLRVPTEEADPDRIELQEDLTYVEKPVR 1645

Query: 5488 IIGRKEKMLRSRVIPLVKV 5544
            I+   E+  R+RVI   KV
Sbjct: 1646 ILEVSERNTRNRVIRFCKV 1664


>emb|CAH66120.1| OSIGBa0146N20.5 [Oryza sativa Indica Group]
          Length = 1481

 Score = 1309 bits (3387), Expect = 0.0
 Identities = 674/1404 (48%), Positives = 914/1404 (65%), Gaps = 13/1404 (0%)
 Frame = +1

Query: 1372 LQNFQRLRPPRFGGSSDPAVVEEWVLRTREILITMQCPRDQWVPVAAFQFDGDASHWWRS 1551
            L +F R+RPP F  +++P    +W+    + L  +QC   + V  A+ Q  G A+ WW  
Sbjct: 63   LADFLRVRPPTFSSTTNPVEAGDWLHAVEKKLDLIQCTEQEKVSFASHQLHGPAAEWWDH 122

Query: 1552 ERNVLGDG-PVEWADFERMFLDRFISETAREIKQQEFSGMVQGNLTVTDYELRFTRLSRY 1728
             R     G P+ W +F   F    I      +K++EF  + QG+ +VT+Y   F RL+RY
Sbjct: 123  FRQGRAGGEPITWQEFTAAFRKTHIPTGVVALKKREFRALNQGSRSVTEYLHDFNRLARY 182

Query: 1729 ALELIPTDLQKARRFFRGLRPYLRAKMSVIETTNYRDTVSRAQRVEREDMELQTSRRLTS 1908
            A E + TD ++  +F  GL   L   +   E  +++  V +A R E +   ++  +R   
Sbjct: 183  APEDVRTDEERQEKFLEGLNDELSYALMSTEFRDFQQLVDKAIRQEDKYNRMEQKKRRA- 241

Query: 1909 RPQASFPPRADPAKRP-MYSRPSASVPTYSQYQT-----PTPSSYXXXXXXXXXXXXXXL 2070
               A F  +    +RP + + P A  P+Y Q  +     P    Y              +
Sbjct: 242  ---AQFKSQQGSNQRPRLVTGPQA--PSYPQGGSSSVVRPQRQFYNNNTGNRGNDNRNVV 296

Query: 2071 TRQIPRSPASQRLIQ---AGPLTCYGCGEAGHMKRNCP---RLXXXXXXXXXXXXRPQGR 2232
            TR       +Q + +   + P+ C+ CG+ GH    CP   R+             P+ R
Sbjct: 297  TRPAATPVQNQPVRKDQGSKPVICFNCGDPGHYADKCPKPRRVKNAPTSNNSNVPAPKAR 356

Query: 2233 VYALTHEEYQPSHEVMEGNLILSNMQVHVLIDTGSSNSFISTRLASMLELDVENTGKILS 2412
            V  +   E Q + +V+ G   ++++   VL D+G+++SF+S   AS   ++V + G+ L 
Sbjct: 357  VNHVAAAEAQNAPDVVLGTFPVNSIPATVLFDSGATHSFLSKSFASKHGMEVVSLGRPLL 416

Query: 2413 LSTPLGNNTIPKSVCKNCVIRLVDQELSTDLILLELNDFDVILGMDWLVRNHAHVDCYSR 2592
            ++TP GN       C +  I + +    + LILLE  D DVILGMDWL R+   +DC +R
Sbjct: 417  VNTP-GNQVFSTQYCPSVTIEIEEVPFPSSLILLESKDLDVILGMDWLSRHRGVIDCANR 475

Query: 2593 IVTFKIPGRPILKFMGFKNRIEKYLKSKLNNLTTEEKAVPELVEIPVVRDFRSLFPEELP 2772
             VT        + F     +    + +++            L EIP+V+D+  +FPE+LP
Sbjct: 476  KVTLTNSNGETVSFFASSPKSPGVVLNQV-----------ALQEIPIVQDYPDVFPEDLP 524

Query: 2773 GLPPIRAIEFSIDLIPGTAPISITPYRMAPAETRELKSQIDELTHLGFIRPSFSPWGAPV 2952
            G+PP R IEF IDL+PGT PI   PYRMA  E  E+K Q+D+L   G+IRPS SPWGAPV
Sbjct: 525  GMPPKRDIEFRIDLVPGTNPIHKRPYRMAANELAEVKKQVDDLLQKGYIRPSTSPWGAPV 584

Query: 2953 LFVKKKDGSFRLCIDYRRLNQVTIKNKYPLPRIEDLFDQLQGAQYFSKIDLRSGYHQLKI 3132
            +FV+KKD + R+C+DYR LN+VTIKNKYPLPRI+DLFDQL+GA  FSKIDLRSGYHQL+I
Sbjct: 585  IFVEKKDHTQRMCVDYRALNEVTIKNKYPLPRIDDLFDQLKGATVFSKIDLRSGYHQLRI 644

Query: 3133 KEDDIPKTAFRTRLGHYEYLVMPFGLTNAPAAFMDLMNRVFWEYLDKFVIVFIDDILIYX 3312
            +E+DIPKTAF TR G +E  VM FGLTNAPA FM+LMN+VF EYLDKFV+VFIDDILIY 
Sbjct: 645  REEDIPKTAFTTRYGLFECTVMSFGLTNAPAFFMNLMNKVFMEYLDKFVVVFIDDILIYS 704

Query: 3313 XXXXXXXXXLKITLQTLQDHQLYAKFSKCEFWLKEVKFLGHVVSSKGVSVDPSKIEAVTS 3492
                     L++ L+ L++HQLYAKFSKCEFWL EVKFLGHV+SS GV+VDPS +E+V +
Sbjct: 705  KTKEEHEEHLRLALEKLREHQLYAKFSKCEFWLSEVKFLGHVISSGGVAVDPSNVESVLN 764

Query: 3493 WKQPTSVAEIRSFLGLAGYYRRFVEGFSMIASPLTRLTQKNVKYEWDDRCEAAFQELKTR 3672
            WKQP +V+E+RSFLGLAGYYRRF+E FS IA P+TRL QK VKY+W + CE +FQELK R
Sbjct: 765  WKQPKTVSEVRSFLGLAGYYRRFIENFSKIARPMTRLLQKEVKYKWTEDCEQSFQELKKR 824

Query: 3673 LTTAPVLIAPVPGESLVIYTDASGIGLGCVLMQNGKVIAYASRKLKTHEKNYPAHDLELA 3852
            L TAPVLI P   +   +Y DAS +GLGCVLMQ GKV+AYASR+L+ HE NYP HDLELA
Sbjct: 825  LVTAPVLILPDSRKDFQVYCDASRLGLGCVLMQEGKVVAYASRQLRPHENNYPTHDLELA 884

Query: 3853 SIVFSLKIWRHYLYGEKFELFSDHKSLKYIFSQKELNMRQRRWMEYLKDYDFTLHYHPGK 4032
            ++V +LKIWRHYLYG   E+++DHKSLKYIF+Q +LNMRQRRW+E +KDYD  +HYHPGK
Sbjct: 885  AVVHALKIWRHYLYGNHTEIYTDHKSLKYIFTQPDLNMRQRRWLELIKDYDMEIHYHPGK 944

Query: 4033 ANVVADALSRRKESVLAQMMLSEWHMLESVIEFVFDSPKNEDRQHSYLAPLRLHNTLTQR 4212
            ANVVADALSR+    +++     W + +      F+          ++A L    TL  +
Sbjct: 945  ANVVADALSRKSYCNMSEGRCLPWELCQE-----FEKLNLGIVSKGFVAALEAKPTLFDQ 999

Query: 4213 IVESQNLDADVVEHCLKAGDSENHEWNIHADGSIRFQNRLWIPTDEQLRKDILGEAHRSR 4392
            I E+Q  D D+ E        +   +     G++    R+ +P +++L+  I+ EAH + 
Sbjct: 1000 IREAQVNDPDIQEIKKNMRRGKAVGFVEDKQGTVWLGERICVPENKELKDTIMKEAHETL 1059

Query: 4393 YSIHPGGTKMYRDLRKHFWWPGMKKHIAQYVNRCMTCQQVKAEHQRPAGLLQPLPVAEWK 4572
            YSIHPG TKMY+DL++ FWW  M++ IA+YV  C  CQ+VKAE Q+PAGLLQP+ + EWK
Sbjct: 1060 YSIHPGSTKMYQDLKQQFWWASMRREIAEYVALCDVCQRVKAERQKPAGLLQPMKIPEWK 1119

Query: 4573 WEHVTMDFVTGLPKASDGLDAIWVIVDRLTKSAHFLPIKMTHTVDRLSRLYIAEIVRLHG 4752
            WE + MDF+TGLP+ S G D+IWV+VDRLTK AHF+P+K T+T  +L+ LY+A +V LHG
Sbjct: 1120 WEEIGMDFITGLPRTSAGHDSIWVVVDRLTKVAHFIPVKTTYTGHKLAELYMARVVCLHG 1179

Query: 4753 IPVSIVSDRDPRFTSQFWKSLQSALGTQLKFSTAFHPQTDGQSERVIQILEDMLRACVLD 4932
            +P  IVSDR  +FTS+FW+ LQS LGT+L FSTA+HPQTDGQ+ERV QILEDMLRACVLD
Sbjct: 1180 VPKKIVSDRGSQFTSKFWQKLQSELGTRLNFSTAYHPQTDGQTERVNQILEDMLRACVLD 1239

Query: 4933 FGGQWKTHLPLVEFSYNNSFQSSIGMAPFEALYGRPCRSPICWTEVGDTILMGPELVEET 5112
            FGG W  +LP  EFSYNNS+Q+S+ M+P EALYGR CR+P+ W + G+  + G +++ E 
Sbjct: 1240 FGGSWDKNLPYAEFSYNNSYQASLQMSPNEALYGRKCRTPLLWDQTGERQVFGTDILREA 1299

Query: 5113 TEKIRMVQERIKAAQSRQKNYADKRRRPLEFEVGDMVFLKISPKRGISRFGLKGKLKPRY 5292
             EK++++QER++ AQSRQK+YAD RRR L FE GD V+L+++P RG+ RF  KGKL PR+
Sbjct: 1300 EEKVKIIQERLRVAQSRQKSYADNRRRDLTFEEGDYVYLRVTPLRGVHRFQTKGKLAPRF 1359

Query: 5293 VGPFEITERVGQVAYRLVLPSQLAQIHNVFHVSMLRKYEPDPSHILDWQSLQLEEDVSYE 5472
            VGPF+I  R G+VAY+L LP  +A IH+VFHVS L+K    P+   +   ++L+ED++Y 
Sbjct: 1360 VGPFKIVSRRGEVAYQLELPQSMAGIHDVFHVSQLKKCLRVPTEEANPDCIELQEDLTYV 1419

Query: 5473 EGPVQIIGRKEKMLRSRVIPLVKV 5544
            E PV+I+   E+  R+RVI   KV
Sbjct: 1420 EKPVRILEVSERKTRNRVIRFCKV 1443


>gb|ABA98266.1| retrotransposon protein, putative, Ty3-gypsy subclass [Oryza sativa
            Japonica Group]
          Length = 1473

 Score = 1306 bits (3381), Expect = 0.0
 Identities = 675/1410 (47%), Positives = 925/1410 (65%), Gaps = 19/1410 (1%)
 Frame = +1

Query: 1372 LQNFQRLRPPRFGGSSDPAVVEEWVLRTREILITMQCPRDQWVPVAAFQFDGDASHWWRS 1551
            L  F R+RPP F  +++P    +W+    + L  +QC   + V  A+ Q  G AS WW  
Sbjct: 60   LAEFLRVRPPVFSSTTNPVEASDWLHAIEKKLDLLQCTDQEKVSFASHQLHGPASEWWDH 119

Query: 1552 ER-NVLGDGPVEWADFERMFLDRFISETAREIKQQEFSGMVQGNLTVTDYELRFTRLSRY 1728
             R N   D P+ W +F   F    I      +K++EF  + QG+ +VT+Y   F RL+RY
Sbjct: 120  FRLNRTTDEPITWLEFTAAFRKTHIPSGVVSLKKKEFRSLTQGSRSVTEYLHEFNRLARY 179

Query: 1729 ALELIPTDLQKARRFFRGLRPYLRAKMSVIETTNYRDTVSRAQRVEREDMELQTSRRLTS 1908
            A E +  D ++  +F  GL   L   + V +  +++  V +A R E +   ++  +R  +
Sbjct: 180  APEDVRNDEERQEKFLGGLNDELSYPLMVGDYPDFQKLVDKAIRQEDKYNRMEQKKRRIA 239

Query: 1909 RPQA----SFPPRADPAKRPMYSRPSASV--PTYSQYQTPTPSSYXXXXXXXXXXXXXXL 2070
            + +     +  PR     +PM    S+SV  P    +     ++               +
Sbjct: 240  QFKTQQGNNQKPRLTLGPQPMSQGGSSSVVRPQRQFFNNNAGNN---------------I 284

Query: 2071 TRQIPR---SPASQRLIQAG----PLTCYGCGEAGHMKRNCP---RLXXXXXXXXXXXXR 2220
              Q PR   +PA Q+  +      P+ C+ CG+ GH    CP   R+             
Sbjct: 285  RNQAPRPVAAPAQQQPAKREQGNKPVVCFNCGDPGHYADKCPKPRRVKVVPTQNNSAVPA 344

Query: 2221 PQGRVYALTHEEYQPSHEVMEGNLILSNMQVHVLIDTGSSNSFISTRLASMLELDVENTG 2400
             + RV  +   E Q + +V+ G  +++++   VL D+G+++SF+S   A    ++VE+  
Sbjct: 345  SKARVNHVAAAEAQDAPDVILGTFLVNSVPATVLFDSGATHSFLSMSFAGNHGMEVEDLR 404

Query: 2401 KILSLSTPLGNNTIPKSVCKNCVIRLVDQELSTDLILLELNDFDVILGMDWLVRNHAHVD 2580
            + L +STP  N  +      +  I +       +LILL+  D DVILGMDWL R+   +D
Sbjct: 405  RPLMVSTP-SNQALSLQRSPSVRIEIQGVPFLANLILLKSKDLDVILGMDWLARHKGVID 463

Query: 2581 CYSRIVTFKIPGRPILKFMGFKNRIEKYLKSKLNNLTTEEKAVPELVEIPVVRDFRSLFP 2760
            C ++ VT       ++      +   + L+S+LN +T EE        IP+VR++  +FP
Sbjct: 464  CANKKVTLNSYDGRVVTVHALSS---ESLRSRLNQITLEE--------IPIVREYPDVFP 512

Query: 2761 EELPGLPPIRAIEFSIDLIPGTAPISITPYRMAPAETRELKSQIDELTHLGFIRPSFSPW 2940
            ++LPG+PP R IEF IDL+PGT PI   PYRMA  E  E+K Q+D+L   G+IRPS SPW
Sbjct: 513  DDLPGMPPKRDIEFRIDLVPGTTPIHKRPYRMAANELAEVKRQVDDLLQKGYIRPSSSPW 572

Query: 2941 GAPVLFVKKKDGSFRLCIDYRRLNQVTIKNKYPLPRIEDLFDQLQGAQYFSKIDLRSGYH 3120
            GAPV+FV+KKD + R+C+DYR LN VTIKNKYPLPRI+DLFDQL+GA  FSKIDLRSGYH
Sbjct: 573  GAPVIFVEKKDHTQRMCVDYRALNDVTIKNKYPLPRIDDLFDQLKGATVFSKIDLRSGYH 632

Query: 3121 QLKIKEDDIPKTAFRTRLGHYEYLVMPFGLTNAPAAFMDLMNRVFWEYLDKFVIVFIDDI 3300
            QL+IKE+DIPKTAF TR G +E  VM FGLTNAPA FM+LMN+VF EYLDKFV+VFIDDI
Sbjct: 633  QLRIKEEDIPKTAFTTRYGLFECTVMSFGLTNAPAFFMNLMNKVFMEYLDKFVVVFIDDI 692

Query: 3301 LIYXXXXXXXXXXLKITLQTLQDHQLYAKFSKCEFWLKEVKFLGHVVSSKGVSVDPSKIE 3480
            LIY          L++ L+ L++HQLYAKFSKCEFWL EVKFLGHV+S+ GV+VDPS +E
Sbjct: 693  LIYSRTKEEHEEHLRLALEKLREHQLYAKFSKCEFWLSEVKFLGHVISAGGVAVDPSNVE 752

Query: 3481 AVTSWKQPTSVAEIRSFLGLAGYYRRFVEGFSMIASPLTRLTQKNVKYEWDDRCEAAFQE 3660
            +VT+WKQP +V+EIRSFLGLAGYYRRF+E FS IA P+TRL QK+VKY+W + CE +FQE
Sbjct: 753  SVTNWKQPKTVSEIRSFLGLAGYYRRFIENFSKIAKPMTRLLQKDVKYKWSEECERSFQE 812

Query: 3661 LKTRLTTAPVLIAPVPGESLVIYTDASGIGLGCVLMQNGKVIAYASRKLKTHEKNYPAHD 3840
            LK+RL +AP+LI P P +   +Y DAS +GLGCVLMQ+GKV+AYASR+L+ HEKNYP HD
Sbjct: 813  LKSRLISAPILILPDPKKGFQVYCDASKLGLGCVLMQDGKVVAYASRQLRPHEKNYPTHD 872

Query: 3841 LELASIVFSLKIWRHYLYGEKFELFSDHKSLKYIFSQKELNMRQRRWMEYLKDYDFTLHY 4020
            +ELA++V +LKIWRHYL+G + E+++DHKSLKYIF+Q +LNMRQRRW+E +KDYD  +HY
Sbjct: 873  IELAAVVHALKIWRHYLFGTRTEVYTDHKSLKYIFTQPDLNMRQRRWLELIKDYDMGIHY 932

Query: 4021 HPGKANVVADALSRRKESVLAQMMLSEWHMLESVIEFVFDSPKNEDRQHSYLAPLRLHNT 4200
            HPGKANVVADALSR+          +E   L   +   F+          ++A L    T
Sbjct: 933  HPGKANVVADALSRK-----GYCNATEGRQLPLELCKEFERLNLGIVGRGFVAALEAKPT 987

Query: 4201 LTQRIVESQNLDADV--VEHCLKAGDSENHEWNIHADGSIRFQNRLWIPTDEQLRKDILG 4374
            L  ++ E+Q  D D+  ++  ++ G +     + H  G++    R+ +P ++ L+  IL 
Sbjct: 988  LIDQVREAQINDPDIQKIKKNMRRGKAIGFLEDEH--GTVWLGERICVPDNKDLKDAILK 1045

Query: 4375 EAHRSRYSIHPGGTKMYRDLRKHFWWPGMKKHIAQYVNRCMTCQQVKAEHQRPAGLLQPL 4554
            EAH + YSIHPG TKMY+DL++ FWW  MK+ IA+YV  C  CQ+VKAEHQ+PAGLLQPL
Sbjct: 1046 EAHDTLYSIHPGSTKMYQDLKERFWWASMKREIAEYVAVCDVCQRVKAEHQKPAGLLQPL 1105

Query: 4555 PVAEWKWEHVTMDFVTGLPKASDGLDAIWVIVDRLTKSAHFLPIKMTHTVDRLSRLYIAE 4734
             + EWKWE + MDF+TGLP+ S G D+IWVIVDRLTK AHF+P+K T++  RL+ LY+A 
Sbjct: 1106 KIPEWKWEEIGMDFITGLPRTSSGHDSIWVIVDRLTKVAHFIPVKTTYSGSRLAELYMAR 1165

Query: 4735 IVRLHGIPVSIVSDRDPRFTSQFWKSLQSALGTQLKFSTAFHPQTDGQSERVIQILEDML 4914
            IV LHG+P  IVSDR  +FTS FWK LQ  +G++L FSTA+HPQTDGQ+ERV QILEDML
Sbjct: 1166 IVCLHGVPKKIVSDRGSQFTSNFWKKLQEEMGSKLNFSTAYHPQTDGQTERVNQILEDML 1225

Query: 4915 RACVLDFGGQWKTHLPLVEFSYNNSFQSSIGMAPFEALYGRPCRSPICWTEVGDTILMGP 5094
            RAC LDFGG W  +LP  EFSYNNS+Q+S+ MAP+EALYGR CR+P+ W + G+  + G 
Sbjct: 1226 RACALDFGGSWDKNLPYAEFSYNNSYQASLQMAPYEALYGRKCRTPLLWDQTGERQVFGT 1285

Query: 5095 ELVEETTEKIRMVQERIKAAQSRQKNYADKRRRPLEFEVGDMVFLKISPKRGISRFGLKG 5274
            +++ E  EK++++QER++ AQSR K+YAD RRR L FE GD V+L+++P RG+ RF  KG
Sbjct: 1286 DILREAEEKVKIIQERLRVAQSRHKSYADNRRRDLSFEEGDYVYLRVTPFRGVHRFRTKG 1345

Query: 5275 KLKPRYVGPFEITERVGQVAYRLVLPSQLAQIHNVFHVSMLRKYEPDPSHILDWQSLQLE 5454
            KL PR+VGP++I  R G+VAY+L LP  LA +HNVFHVS L+K    P+   + + ++++
Sbjct: 1346 KLAPRFVGPYKIVSRRGEVAYQLELPQSLAGVHNVFHVSQLKKCLRVPTEEANIEQIEVQ 1405

Query: 5455 EDVSYEEGPVQIIGRKEKMLRSRVIPLVKV 5544
            ED++Y E P++I+   E+  R+RVI   KV
Sbjct: 1406 EDLTYVEKPIRILETSERRTRNRVIRFCKV 1435


>gb|AAL78097.1|AC093568_7 Putative polyprotein [Oryza sativa] gi|31430586|gb|AAP52480.1|
            retrotransposon protein, putative, Ty3-gypsy subclass
            [Oryza sativa Japonica Group]
          Length = 1473

 Score = 1306 bits (3380), Expect = 0.0
 Identities = 675/1404 (48%), Positives = 916/1404 (65%), Gaps = 13/1404 (0%)
 Frame = +1

Query: 1372 LQNFQRLRPPRFGGSSDPAVVEEWVLRTREILITMQCPRDQWVPVAAFQFDGDASHWWRS 1551
            L  F R+RPP F  +++P    +W+    + L  +QC   + V  A+ Q  G AS WW  
Sbjct: 60   LAEFLRVRPPVFSSTTNPVEAGDWLHAIEKKLDLLQCTNQEKVSFASHQLHGPASEWWDH 119

Query: 1552 ER-NVLGDGPVEWADFERMFLDRFISETAREIKQQEFSGMVQGNLTVTDYELRFTRLSRY 1728
             R N +   P+ W +F   F    I      +K++EF  + QG+ +VT+Y   F RL+RY
Sbjct: 120  FRLNRITAEPITWLEFTAAFRKTHIPSGVVSLKKKEFRSLTQGSRSVTEYLHEFNRLARY 179

Query: 1729 ALELIPTDLQKARRFFRGLRPYLRAKMSVIETTNYRDTVSRAQRVEREDMELQTSRRLTS 1908
            A E +  D ++  +F  GL   L   + V +  +++  V +A R E +   ++  +R   
Sbjct: 180  APEDVRNDEERQEKFLGGLNDELSYPLMVGDYPDFQKLVDKAIRQEDKYNRMEQKKRRI- 238

Query: 1909 RPQASFPPRADPAKRPMYSRPSASVPTYSQYQTPTPSSYXXXXXXXXXXXXXXLTRQIPR 2088
               A F  +    ++P  +     +P     Q  + S                +  Q PR
Sbjct: 239  ---AQFKTQQGNNQKPRLTLGPQPMP-----QGGSSSVVRPQRQFFNNNAGNNIRNQAPR 290

Query: 2089 ---SPASQRLIQ----AGPLTCYGCGEAGHMKRNCP---RLXXXXXXXXXXXXRPQGRVY 2238
               +PA Q+  +    + P+ C+ CG+ GH    CP   R+              + RV 
Sbjct: 291  PVAAPAQQQPAKREQGSKPVVCFNCGDPGHYADKCPKPRRVKVVPVQNNSAVPASKARVN 350

Query: 2239 ALTHEEYQPSHEVMEGNLILSNMQVHVLIDTGSSNSFISTRLASMLELDVENTGKILSLS 2418
             +   E Q + +V+ G  +++++   VL D+G+++SF+S   A    ++VE+  + L +S
Sbjct: 351  HVAAAEAQDAPDVILGTFLVNSVPATVLFDSGATHSFLSMSFAGNHGMEVEDLRRPLMVS 410

Query: 2419 TPLGNNTIPKSVCKNCVIRLVDQELSTDLILLELNDFDVILGMDWLVRNHAHVDCYSRIV 2598
            TP  N  +      +  I +       +LILLE  D DVILGMDWL R+   +DC +R V
Sbjct: 411  TP-SNQALSLQRSPSVRIEIKGVPFLANLILLESKDLDVILGMDWLARHKGVIDCANRKV 469

Query: 2599 TFKIPGRPILKFMGFKNRIEKYLKSKLNNLTTEEKAVPELVEIPVVRDFRSLFPEELPGL 2778
            T       ++      +   + L+S+LN +T EE        IP+VR++  +FP++LPG+
Sbjct: 470  TLNSYDGRVVTVHALSS---ESLRSRLNQVTLEE--------IPIVREYPDVFPDDLPGM 518

Query: 2779 PPIRAIEFSIDLIPGTAPISITPYRMAPAETRELKSQIDELTHLGFIRPSFSPWGAPVLF 2958
            PP R IEF IDL+PGT PI   PYRMA  E  E+K Q+D+L   G+IRPS SPWGAPV+F
Sbjct: 519  PPKRDIEFRIDLVPGTTPIHKRPYRMAANELAEVKRQVDDLLQKGYIRPSSSPWGAPVIF 578

Query: 2959 VKKKDGSFRLCIDYRRLNQVTIKNKYPLPRIEDLFDQLQGAQYFSKIDLRSGYHQLKIKE 3138
            V+KKD + R+C+DYR LN VTIKNKYPLPRI+DLFDQL+GA  FSKIDLRSGYHQL+IKE
Sbjct: 579  VEKKDHTQRMCVDYRALNDVTIKNKYPLPRIDDLFDQLKGATVFSKIDLRSGYHQLRIKE 638

Query: 3139 DDIPKTAFRTRLGHYEYLVMPFGLTNAPAAFMDLMNRVFWEYLDKFVIVFIDDILIYXXX 3318
            +DIPKTAF TR G +E  VM FGLTNAPA FM+LMN+VF EYLDKFV+VFIDDILIY   
Sbjct: 639  EDIPKTAFITRYGLFECTVMSFGLTNAPAFFMNLMNKVFMEYLDKFVVVFIDDILIYSRT 698

Query: 3319 XXXXXXXLKITLQTLQDHQLYAKFSKCEFWLKEVKFLGHVVSSKGVSVDPSKIEAVTSWK 3498
                   L++ L+ L++HQLYAKFSKCEFWL EVKFLGHV+S+ GV+VDPS +E+VT+WK
Sbjct: 699  KEEHEEHLRLALEKLREHQLYAKFSKCEFWLSEVKFLGHVISAGGVAVDPSNVESVTNWK 758

Query: 3499 QPTSVAEIRSFLGLAGYYRRFVEGFSMIASPLTRLTQKNVKYEWDDRCEAAFQELKTRLT 3678
            QP +V+EIRSFLGLAGYYRRF+E FS IA P+TRL QK+VKY+W + CE +FQELK RL 
Sbjct: 759  QPKTVSEIRSFLGLAGYYRRFIENFSKIAKPMTRLLQKDVKYKWSEECEQSFQELKNRLV 818

Query: 3679 TAPVLIAPVPGESLVIYTDASGIGLGCVLMQNGKVIAYASRKLKTHEKNYPAHDLELASI 3858
            +AP+LI P P +   +Y DAS +GLGCVLMQ+GKV+AYASR+L+ HEKNYP HDL+LA++
Sbjct: 819  SAPILILPDPKKGFQVYCDASKLGLGCVLMQDGKVVAYASRQLRPHEKNYPTHDLKLAAV 878

Query: 3859 VFSLKIWRHYLYGEKFELFSDHKSLKYIFSQKELNMRQRRWMEYLKDYDFTLHYHPGKAN 4038
            V +LKIWRHYL+G + E+++DHKSLKYIF+Q +LNMRQRRW+E +KDYD  +HYHPGKAN
Sbjct: 879  VHALKIWRHYLFGTRTEVYTDHKSLKYIFTQPDLNMRQRRWLELIKDYDMGIHYHPGKAN 938

Query: 4039 VVADALSRRKESVLAQMMLSEWHMLESVIEFVFDSPKNEDRQHSYLAPLRLHNTLTQRIV 4218
            VVADALSR+          +E   L   +   F+          ++A L    TL  ++ 
Sbjct: 939  VVADALSRK-----GYCNATEGRQLPLELCKEFERLNLGIVSRGFVAALEAKPTLIDQVR 993

Query: 4219 ESQNLDADVVEHCLKAGDSENHEWNIHAD--GSIRFQNRLWIPTDEQLRKDILGEAHRSR 4392
            E+Q  D D+ E  +K             D  G++    R+ +P ++ L+  IL EAH + 
Sbjct: 994  EAQINDPDIQE--IKKNRRRGKAIGFLEDEHGTVWLGERICVPDNKDLKDAILKEAHDTL 1051

Query: 4393 YSIHPGGTKMYRDLRKHFWWPGMKKHIAQYVNRCMTCQQVKAEHQRPAGLLQPLPVAEWK 4572
            YSIHPG TKMY+DL+K FWW  MK+ IA+YV  C  CQ+VKAEHQ+PAGLLQPL + EWK
Sbjct: 1052 YSIHPGSTKMYQDLKKRFWWASMKREIAEYVAVCDVCQRVKAEHQKPAGLLQPLKIPEWK 1111

Query: 4573 WEHVTMDFVTGLPKASDGLDAIWVIVDRLTKSAHFLPIKMTHTVDRLSRLYIAEIVRLHG 4752
            WE + MDF+TGLP+ S G D+IWVIVDRLTK AHF+P+K T++  RL+ LY+A IV LHG
Sbjct: 1112 WEEIGMDFITGLPRTSSGHDSIWVIVDRLTKVAHFIPVKTTYSGSRLAELYMARIVCLHG 1171

Query: 4753 IPVSIVSDRDPRFTSQFWKSLQSALGTQLKFSTAFHPQTDGQSERVIQILEDMLRACVLD 4932
            +P  IVSDR  +FTS FWK LQ  +G++L FSTA+HPQTDGQ+ERV QILEDMLRAC LD
Sbjct: 1172 VPKKIVSDRGSQFTSNFWKKLQEEMGSKLNFSTAYHPQTDGQTERVNQILEDMLRACALD 1231

Query: 4933 FGGQWKTHLPLVEFSYNNSFQSSIGMAPFEALYGRPCRSPICWTEVGDTILMGPELVEET 5112
            FGG W  +LP  EFSYNNS+Q+S+ MAP+EALYGR CR+P+ W + G+  + G +++ E 
Sbjct: 1232 FGGSWDKNLPYAEFSYNNSYQASLQMAPYEALYGRKCRTPLLWDQTGERQVFGTDILREA 1291

Query: 5113 TEKIRMVQERIKAAQSRQKNYADKRRRPLEFEVGDMVFLKISPKRGISRFGLKGKLKPRY 5292
             EK++++QER++ AQSR K+YAD RRR L FE GD V+L+++P RG+ RF  KGKL PR+
Sbjct: 1292 EEKVKIIQERLRVAQSRHKSYADNRRRDLSFEEGDYVYLRVTPLRGVHRFQTKGKLAPRF 1351

Query: 5293 VGPFEITERVGQVAYRLVLPSQLAQIHNVFHVSMLRKYEPDPSHILDWQSLQLEEDVSYE 5472
            VGP++I  R G+VAY+L LP  LA +H+VFHVS L+K    P+   + + ++++ED++Y 
Sbjct: 1352 VGPYKIVSRRGEVAYQLELPQSLAGVHDVFHVSQLKKCLRVPTEEANIEQIEVQEDLTYV 1411

Query: 5473 EGPVQIIGRKEKMLRSRVIPLVKV 5544
            E P++I+   E+  R+RVI   KV
Sbjct: 1412 EKPIRILETSERRTRNRVIRFCKV 1435


>emb|CAD40208.2| OSJNBa0019J05.6 [Oryza sativa Japonica Group]
          Length = 1616

 Score = 1305 bits (3376), Expect = 0.0
 Identities = 672/1402 (47%), Positives = 914/1402 (65%), Gaps = 11/1402 (0%)
 Frame = +1

Query: 1372 LQNFQRLRPPRFGGSSDPAVVEEWVLRTREILITMQCPRDQWVPVAAFQFDGDASHWWRS 1551
            L  F R+RPP F  +++P    +W+    + L  +QC   + V   + Q  G AS WW  
Sbjct: 203  LAEFLRVRPPVFSSTTNPVEASDWLHAIEKKLDLLQCTDQEKVSFVSHQLHGPASEWWDH 262

Query: 1552 ER-NVLGDGPVEWADFERMFLDRFISETAREIKQQEFSGMVQGNLTVTDYELRFTRLSRY 1728
             R N     P+ W +F   F    I      +K++EF  + QG+ +VT+Y   F RL+RY
Sbjct: 263  FRLNRTTAEPITWLEFTAAFRKTHIPLGVVSLKKKEFRSLTQGSRSVTEYLHEFNRLARY 322

Query: 1729 ALELIPTDLQKARRFFRGLRPYLRAKMSVIETTNYRDTVSRAQRVEREDMELQTSRRLTS 1908
            A E +  D ++  +F  GL   L   + V +  +++  V +A R E +   ++  +R   
Sbjct: 323  APEDVRNDEERQEKFLGGLNDELSYPLMVGDHPDFQKLVDKAIRQEDKYNRMEQKKRRI- 381

Query: 1909 RPQASFPPRADPAKRPMYSRPSASVPTYSQYQTPTPSSYXXXXXXXXXXXXXXLTRQIPR 2088
               A F  +    ++P  +    S+P     Q  + S                +  Q PR
Sbjct: 382  ---AQFKTQQGNNQKPRLTLGPQSMP-----QGGSSSVVRPQRQFFNNNAGNNIRNQAPR 433

Query: 2089 ---SPASQRLIQAG----PLTCYGCGEAGHMKRNCP---RLXXXXXXXXXXXXRPQGRVY 2238
               +PA Q+  +      P+ C+ CG+ GH    CP   R+              + RV 
Sbjct: 434  PVAAPAQQQPAKREQGNKPVVCFNCGDPGHYADKCPKPRRVKVVPAQNNSAVPASKARVN 493

Query: 2239 ALTHEEYQPSHEVMEGNLILSNMQVHVLIDTGSSNSFISTRLASMLELDVENTGKILSLS 2418
             +   E Q + +V+ G  +++++   VL D+G+++SF+S   A   E++VE+  + L +S
Sbjct: 494  HVAAAEAQDAPDVILGTFLVNSVPATVLFDSGATHSFLSMSFAGNHEMEVEDLRRPLMVS 553

Query: 2419 TPLGNNTIPKSVCKNCVIRLVDQELSTDLILLELNDFDVILGMDWLVRNHAHVDCYSRIV 2598
            TP  N  +      +  I +       +LILL+  D DVILGMDWL R+   +DC +R V
Sbjct: 554  TP-SNQALSLQRSPSVKIEIQGVPFLANLILLKSKDLDVILGMDWLARHKGVIDCANRKV 612

Query: 2599 TFKIPGRPILKFMGFKNRIEKYLKSKLNNLTTEEKAVPELVEIPVVRDFRSLFPEELPGL 2778
            T       ++      +   + L+S+LN +T EE        IP+VR++  +FP++LPG+
Sbjct: 613  TLNSYDGRVVTVHALSS---ESLRSRLNQITLEE--------IPIVREYPDVFPDDLPGM 661

Query: 2779 PPIRAIEFSIDLIPGTAPISITPYRMAPAETRELKSQIDELTHLGFIRPSFSPWGAPVLF 2958
            PP R IEF IDL+PGT PI   PYRMA  E  E+K Q+D+L   G+IRPS SPWGAPV+F
Sbjct: 662  PPKRDIEFRIDLVPGTTPIHKRPYRMAANELAEVKRQVDDLLQKGYIRPSSSPWGAPVIF 721

Query: 2959 VKKKDGSFRLCIDYRRLNQVTIKNKYPLPRIEDLFDQLQGAQYFSKIDLRSGYHQLKIKE 3138
            V+KKD + R+C+DYR LN VTIKNKYPLPRI+DLFDQL+GA  FSKIDLRSGYHQL+IKE
Sbjct: 722  VEKKDHTQRMCVDYRALNDVTIKNKYPLPRIDDLFDQLKGATVFSKIDLRSGYHQLRIKE 781

Query: 3139 DDIPKTAFRTRLGHYEYLVMPFGLTNAPAAFMDLMNRVFWEYLDKFVIVFIDDILIYXXX 3318
            +DIPKTAF TR G ++  VM FGLTNAPA FM+LMN+VF EYLDKFV+VFIDDILIY   
Sbjct: 782  EDIPKTAFTTRYGLFKCTVMSFGLTNAPAFFMNLMNKVFMEYLDKFVVVFIDDILIYSRT 841

Query: 3319 XXXXXXXLKITLQTLQDHQLYAKFSKCEFWLKEVKFLGHVVSSKGVSVDPSKIEAVTSWK 3498
                   L++ L+ L++HQLYAKFSKCEFWL EVKFLGHV+S+ GV+VDPS +E+VT+WK
Sbjct: 842  KEEHEEHLRLALEKLREHQLYAKFSKCEFWLSEVKFLGHVISAGGVAVDPSNVESVTNWK 901

Query: 3499 QPTSVAEIRSFLGLAGYYRRFVEGFSMIASPLTRLTQKNVKYEWDDRCEAAFQELKTRLT 3678
            QP +V+EIRSFLGLAGYYRRF+E FS IA P+TRL QK+VKY+W + CE +FQELK+RL 
Sbjct: 902  QPKTVSEIRSFLGLAGYYRRFIENFSKIAKPMTRLLQKDVKYKWSEECEQSFQELKSRLI 961

Query: 3679 TAPVLIAPVPGESLVIYTDASGIGLGCVLMQNGKVIAYASRKLKTHEKNYPAHDLELASI 3858
            +AP+LI P P +   +Y D S +GLGCVLMQ+GKV+AYASR+L+ HEKNYP HD+ELA++
Sbjct: 962  SAPILILPDPKKGFQVYCDVSKLGLGCVLMQDGKVVAYASRQLRPHEKNYPTHDIELAAV 1021

Query: 3859 VFSLKIWRHYLYGEKFELFSDHKSLKYIFSQKELNMRQRRWMEYLKDYDFTLHYHPGKAN 4038
            V +LKIWRHYL+G + E+++DHKSLKYIF+Q +LNMRQRRW+E +KDYD  +HYHPGKAN
Sbjct: 1022 VHALKIWRHYLFGTRTEVYTDHKSLKYIFTQPDLNMRQRRWLELIKDYDMGIHYHPGKAN 1081

Query: 4039 VVADALSRRKESVLAQMMLSEWHMLESVIEFVFDSPKNEDRQHSYLAPLRLHNTLTQRIV 4218
            VVADALSR+          +E   L   +   F+          ++A L    TL  ++ 
Sbjct: 1082 VVADALSRK-----GYCNATEGRQLPLELCKEFERLNLGIVGRGFVAALEAKPTLIDQVR 1136

Query: 4219 ESQNLDADVVEHCLKAGDSENHEWNIHADGSIRFQNRLWIPTDEQLRKDILGEAHRSRYS 4398
            E+Q  D D+ E        +   +     G++    R+ +P ++ L+  IL EAH + YS
Sbjct: 1137 EAQINDPDIQEIKKNMRRGKAIGFLEDEQGTVWLGKRICVPDNKDLKDAILKEAHDTLYS 1196

Query: 4399 IHPGGTKMYRDLRKHFWWPGMKKHIAQYVNRCMTCQQVKAEHQRPAGLLQPLPVAEWKWE 4578
            IHPG TKMY+DLR+ FWW  MK+ IA+YV  C  CQ+VKAEHQ+PAGLLQPL + EWKWE
Sbjct: 1197 IHPGSTKMYQDLRERFWWASMKREIAEYVAVCDVCQRVKAEHQKPAGLLQPLKIPEWKWE 1256

Query: 4579 HVTMDFVTGLPKASDGLDAIWVIVDRLTKSAHFLPIKMTHTVDRLSRLYIAEIVRLHGIP 4758
             + MDF+TGLP+ S G D+IWVIVDRLTK AHF+P+K T++  RL+ LY+A IV LHG+P
Sbjct: 1257 EIGMDFITGLPRTSSGHDSIWVIVDRLTKVAHFIPVKTTYSGSRLAELYMARIVCLHGVP 1316

Query: 4759 VSIVSDRDPRFTSQFWKSLQSALGTQLKFSTAFHPQTDGQSERVIQILEDMLRACVLDFG 4938
              IVSDR  +FTS FWK LQ  +G++L FSTA+HPQTDGQ+ERV QILEDMLRAC LDFG
Sbjct: 1317 KKIVSDRGSQFTSNFWKKLQEEMGSKLNFSTAYHPQTDGQTERVNQILEDMLRACALDFG 1376

Query: 4939 GQWKTHLPLVEFSYNNSFQSSIGMAPFEALYGRPCRSPICWTEVGDTILMGPELVEETTE 5118
            G W  +LP  EFSYNNS+Q+S+ MAP+EALYGR CR+P+ W + G+  + G +++ E  E
Sbjct: 1377 GSWDKNLPYAEFSYNNSYQASLQMAPYEALYGRKCRTPLLWDQTGERQVFGTDILREAEE 1436

Query: 5119 KIRMVQERIKAAQSRQKNYADKRRRPLEFEVGDMVFLKISPKRGISRFGLKGKLKPRYVG 5298
            K++++QER++ AQSR K+YAD RRR L FE GD V+L+++P RG+ RF  KGKL PR+VG
Sbjct: 1437 KVKVIQERLRVAQSRHKSYADNRRRDLSFEEGDYVYLRVTPLRGVHRFHTKGKLAPRFVG 1496

Query: 5299 PFEITERVGQVAYRLVLPSQLAQIHNVFHVSMLRKYEPDPSHILDWQSLQLEEDVSYEEG 5478
            P++I  R G+VAY+L LP  LA +HNVFHVS L+K    P+   + + ++++ED++Y E 
Sbjct: 1497 PYKIASRRGEVAYQLELPQSLAGVHNVFHVSQLKKCLRVPTEEANIEQIEVQEDLTYVEK 1556

Query: 5479 PVQIIGRKEKMLRSRVIPLVKV 5544
            P++I+   E+  R+RVI   KV
Sbjct: 1557 PIRILETNERRTRNRVIRFCKV 1578


>emb|CAH66289.1| OSIGBa0161P06.6 [Oryza sativa Indica Group]
          Length = 1433

 Score = 1303 bits (3373), Expect = 0.0
 Identities = 669/1386 (48%), Positives = 905/1386 (65%), Gaps = 12/1386 (0%)
 Frame = +1

Query: 1372 LQNFQRLRPPRFGGSSDPAVVEEWVLRTREILITMQCPRDQWVPVAAFQFDGDASHWWRS 1551
            L +F R+RPP F  +++P    +W+    + L  +QC   + V  A+ Q  G A+ WW  
Sbjct: 63   LADFLRVRPPTFSSTTNPVEAGDWLHAVEKKLDLIQCTEQEKVSFASHQLHGPAAEWWDH 122

Query: 1552 ERNVLGDG-PVEWADFERMFLDRFISETAREIKQQEFSGMVQGNLTVTDYELRFTRLSRY 1728
             R     G P+ W +F   F    I      +K++EF  + QG+ +VT+Y   F RL+RY
Sbjct: 123  FRQGRAGGEPITWQEFTAAFRKTHIPTGVVALKKREFRALNQGSRSVTEYLHDFNRLARY 182

Query: 1729 ALELIPTDLQKARRFFRGLRPYLRAKMSVIETTNYRDTVSRAQRVEREDMELQTSRRLTS 1908
            A E + TD ++  +F  GL   L   +   E  +++  V +A R E +   ++  +R   
Sbjct: 183  APEDVRTDEERQEKFLEGLNDELSYTLMSTEFRDFQQLVDKAIRQEDKYNRMEQKKRRA- 241

Query: 1909 RPQASFPPRADPAKRPMYSRPSASVPTYSQYQT-----PTPSSYXXXXXXXXXXXXXXLT 2073
               A F  +    +RP        VP+YSQ  +     P    Y              + 
Sbjct: 242  ---AQFKSQQGSNQRPRLVT-GPQVPSYSQGGSSSVVRPQRQFYNNNTGNRGNDNRNVVA 297

Query: 2074 RQIPRSPASQRLIQ---AGPLTCYGCGEAGHMKRNCP---RLXXXXXXXXXXXXRPQGRV 2235
            R    S  +Q + +   + P+ C+ CG+ GH    CP   R+             P+ RV
Sbjct: 298  RPAATSVQNQPVRKDQGSKPVICFNCGDPGHYADKCPKPRRVKNAPVPNNSNVPAPKARV 357

Query: 2236 YALTHEEYQPSHEVMEGNLILSNMQVHVLIDTGSSNSFISTRLASMLELDVENTGKILSL 2415
              +   E Q + +V+ G   ++++   VL D+G+++SF+S   AS   ++V + G+ L +
Sbjct: 358  NHVAAAEAQNAPDVVLGTFPVNSIPATVLFDSGATHSFLSKSFASKHGMEVVSLGRPLLV 417

Query: 2416 STPLGNNTIPKSVCKNCVIRLVDQELSTDLILLELNDFDVILGMDWLVRNHAHVDCYSRI 2595
            ++P GN       C +  I + +    + LILLE  D DVILGMDWL R+   +DC +R 
Sbjct: 418  NSP-GNQAFSTQYCPSVTIEIEEVPFPSSLILLESKDLDVILGMDWLSRHRGVIDCANRK 476

Query: 2596 VTFKIPGRPILKFMGFKNRIEKYLKSKLNNLTTEEKAVPELVEIPVVRDFRSLFPEELPG 2775
            VT        + F     +    + +++            L EIP+V+D+  +FPE+LPG
Sbjct: 477  VTLTNSNGETVSFFASSPKSHGVVLNQV-----------ALQEIPIVQDYPDVFPEDLPG 525

Query: 2776 LPPIRAIEFSIDLIPGTAPISITPYRMAPAETRELKSQIDELTHLGFIRPSFSPWGAPVL 2955
            +PP R IEF IDL+PGT PI   PYRMA  E  E+K Q+D+L   G+IRPS SPWGAPV+
Sbjct: 526  MPPKRDIEFRIDLVPGTNPIHKRPYRMAANELAEVKKQVDDLLQKGYIRPSTSPWGAPVI 585

Query: 2956 FVKKKDGSFRLCIDYRRLNQVTIKNKYPLPRIEDLFDQLQGAQYFSKIDLRSGYHQLKIK 3135
            FV+KKD + R+C+DYR LN+VTIKNKYPLPRI+DLFDQL+GA  FSKIDLRSGYHQL+I+
Sbjct: 586  FVEKKDHTQRMCVDYRALNEVTIKNKYPLPRIDDLFDQLKGATVFSKIDLRSGYHQLRIR 645

Query: 3136 EDDIPKTAFRTRLGHYEYLVMPFGLTNAPAAFMDLMNRVFWEYLDKFVIVFIDDILIYXX 3315
            E+DIPKTAF TR G +E +VM FGLTNAPA FM+LMN+VF EYLDKFV+VFIDDILIY  
Sbjct: 646  EEDIPKTAFTTRYGLFECIVMSFGLTNAPAFFMNLMNKVFMEYLDKFVVVFIDDILIYSK 705

Query: 3316 XXXXXXXXLKITLQTLQDHQLYAKFSKCEFWLKEVKFLGHVVSSKGVSVDPSKIEAVTSW 3495
                    L++ L+ L++HQLYAKFSKCEFWL EVKFLGHV+SS GV+VDPS +E+V SW
Sbjct: 706  TKEEHEEHLRLALEKLREHQLYAKFSKCEFWLSEVKFLGHVISSGGVAVDPSNVESVLSW 765

Query: 3496 KQPTSVAEIRSFLGLAGYYRRFVEGFSMIASPLTRLTQKNVKYEWDDRCEAAFQELKTRL 3675
            KQP +V+E+RSFLGLAGYYRRF+E FS IA P+TRL QK+VKY+W + CE +FQELK RL
Sbjct: 766  KQPKTVSEVRSFLGLAGYYRRFIENFSKIARPMTRLLQKDVKYKWTEDCERSFQELKKRL 825

Query: 3676 TTAPVLIAPVPGESLVIYTDASGIGLGCVLMQNGKVIAYASRKLKTHEKNYPAHDLELAS 3855
             TAPVLI P   +   +Y DAS  GLGCVLMQ GKV+AYASR+L+ HE NYP HDLELA+
Sbjct: 826  VTAPVLILPDSRKDFQVYCDASRHGLGCVLMQEGKVVAYASRQLRPHENNYPTHDLELAA 885

Query: 3856 IVFSLKIWRHYLYGEKFELFSDHKSLKYIFSQKELNMRQRRWMEYLKDYDFTLHYHPGKA 4035
            +V +LKIWRHYLYG   E+++DHKSLKYIF+Q +LNMRQRRW+E +KDYD  +HYHPGKA
Sbjct: 886  VVHALKIWRHYLYGNHTEIYTDHKSLKYIFTQPDLNMRQRRWLELIKDYDMEIHYHPGKA 945

Query: 4036 NVVADALSRRKESVLAQMMLSEWHMLESVIEFVFDSPKNEDRQHSYLAPLRLHNTLTQRI 4215
            NVVADALSR+    +++     W + +      F+          ++A L    TL  +I
Sbjct: 946  NVVADALSRKSYCNMSEGRCLPWELCQE-----FEKLNLGIVSKGFVAALEAKPTLFDQI 1000

Query: 4216 VESQNLDADVVEHCLKAGDSENHEWNIHADGSIRFQNRLWIPTDEQLRKDILGEAHRSRY 4395
             E+Q  D D+ E        +   +     G++    R+ +P +++L+  I+ EAH + Y
Sbjct: 1001 REAQVNDPDIQEIKKNMRRGKAAGFVEDEQGTVWLGERICVPENKELKDTIMKEAHGTLY 1060

Query: 4396 SIHPGGTKMYRDLRKHFWWPGMKKHIAQYVNRCMTCQQVKAEHQRPAGLLQPLPVAEWKW 4575
            SIHPG TKMY+DL++ FWW  M++ IA+YV  C  CQ+VKAEHQ+PAGLLQPL + EWKW
Sbjct: 1061 SIHPGSTKMYQDLKQQFWWASMRREIAEYVALCDVCQRVKAEHQKPAGLLQPLKIPEWKW 1120

Query: 4576 EHVTMDFVTGLPKASDGLDAIWVIVDRLTKSAHFLPIKMTHTVDRLSRLYIAEIVRLHGI 4755
            E + MDF+TGLP+ S G D+IWV+VDRLTK AHF+P+K T+T  +L+ LY+A +V LHG+
Sbjct: 1121 EEIGMDFITGLPRTSAGHDSIWVVVDRLTKVAHFIPVKTTYTGHKLAELYMARVVCLHGV 1180

Query: 4756 PVSIVSDRDPRFTSQFWKSLQSALGTQLKFSTAFHPQTDGQSERVIQILEDMLRACVLDF 4935
            P  IVS+R  +FTS+FW+ LQS LGT+L FSTA+HPQTDGQ+ERV QILEDMLRACVLDF
Sbjct: 1181 PKKIVSNRGSQFTSKFWQKLQSELGTRLNFSTAYHPQTDGQTERVNQILEDMLRACVLDF 1240

Query: 4936 GGQWKTHLPLVEFSYNNSFQSSIGMAPFEALYGRPCRSPICWTEVGDTILMGPELVEETT 5115
            GG W  +LP  EFSYNNS+Q+S+ M+P EALYGR CR+P+ W + G+  + G +++ E  
Sbjct: 1241 GGSWDKNLPYAEFSYNNSYQASLQMSPNEALYGRKCRTPLLWDQTGERQVFGTDILREAE 1300

Query: 5116 EKIRMVQERIKAAQSRQKNYADKRRRPLEFEVGDMVFLKISPKRGISRFGLKGKLKPRYV 5295
            EK++++QER++ AQSRQK+YAD RRR L FE GD V+L+++P RG+ RF  KGKL PR+V
Sbjct: 1301 EKVKIIQERLRVAQSRQKSYADNRRRDLVFEEGDYVYLRVTPLRGVHRFQTKGKLAPRFV 1360

Query: 5296 GPFEITERVGQVAYRLVLPSQLAQIHNVFHVSMLRKYEPDPSHILDWQSLQLEEDVSYEE 5475
            GPF+I  R G+VAY+L LP  +A IH+VFHVS L+K    P+   D   ++L+ED++Y E
Sbjct: 1361 GPFKIVSRRGEVAYQLELPPSMAGIHDVFHVSQLKKCLRVPTEEADPDRIELQEDLTYVE 1420

Query: 5476 GPVQII 5493
             PV+I+
Sbjct: 1421 KPVRIL 1426


>gb|AAS98511.1| putative polyprotein [Oryza sativa Japonica Group]
          Length = 1678

 Score = 1303 bits (3373), Expect = 0.0
 Identities = 671/1402 (47%), Positives = 910/1402 (64%), Gaps = 11/1402 (0%)
 Frame = +1

Query: 1372 LQNFQRLRPPRFGGSSDPAVVEEWVLRTREILITMQCPRDQWVPVAAFQFDGDASHWWRS 1551
            L  F R+RPP F  +++P    +W+    + L  +QC   + V  A+ Q  G AS WW  
Sbjct: 265  LAEFLRVRPPVFSSTTNPVEASDWLHAIEKKLDLLQCTDQEKVSFASHQLHGPASEWWDH 324

Query: 1552 ER-NVLGDGPVEWADFERMFLDRFISETAREIKQQEFSGMVQGNLTVTDYELRFTRLSRY 1728
             R N     P+ W +F   F    I      +K++EF  + QG+ +VT+Y   F RL+RY
Sbjct: 325  FRLNRTTAEPITWLEFTAAFRKTHIPSGVVSLKKKEFRSLSQGSRSVTEYLHEFNRLARY 384

Query: 1729 ALELIPTDLQKARRFFRGLRPYLRAKMSVIETTNYRDTVSRAQRVEREDMELQTSRRLTS 1908
            A E +  D ++  +F  GL   L   + V +  +++  V +A R E +   ++  +R   
Sbjct: 385  APEDVRNDEERQEKFLGGLNDELSYPLMVGDYPDFQKLVDKAIRQEDKYNRMEQKKRRI- 443

Query: 1909 RPQASFPPRADPAKRPMYSRPSASVPTYSQYQTPTPSSYXXXXXXXXXXXXXXLTRQIPR 2088
               A F  +    ++P  +     +P     Q  + S                +  Q PR
Sbjct: 444  ---AQFKTQQGNNQKPRLTLGPQPMP-----QGGSSSVVRPQRQFFNNNAGNNIRNQAPR 495

Query: 2089 SPASQRLIQAG-------PLTCYGCGEAGHMKRNCP---RLXXXXXXXXXXXXRPQGRVY 2238
              A+    Q         P+ C+ CG+ GH    CP   R+              + RV 
Sbjct: 496  PVAAPTQQQPAKREQGNKPVVCFNCGDPGHYADKCPKPRRVKVVPAQSNSTVSASKARVN 555

Query: 2239 ALTHEEYQPSHEVMEGNLILSNMQVHVLIDTGSSNSFISTRLASMLELDVENTGKILSLS 2418
             +   E Q + +V+ G  +++++   VL D+G+++SF+S   A    ++VE+  + L +S
Sbjct: 556  HVAAAEAQDAPDVILGTFLVNSVPATVLFDSGATHSFLSMSFAGNHGMEVEDLRRPLMVS 615

Query: 2419 TPLGNNTIPKSVCKNCVIRLVDQELSTDLILLELNDFDVILGMDWLVRNHAHVDCYSRIV 2598
            TP  N  +      +  I +       +LILLE  D DVILGMDWL R+   +DC +R V
Sbjct: 616  TP-SNQALSLQRSPSVRIEIQGVPFLANLILLESKDLDVILGMDWLARHKGVIDCANRKV 674

Query: 2599 TFKIPGRPILKFMGFKNRIEKYLKSKLNNLTTEEKAVPELVEIPVVRDFRSLFPEELPGL 2778
            T       ++      +   ++L+S+LN +T EE        IP+VR++  +FP++LPG+
Sbjct: 675  TLNSYDGRVVTVHALSS---EFLRSRLNQITLEE--------IPIVREYPDVFPDDLPGM 723

Query: 2779 PPIRAIEFSIDLIPGTAPISITPYRMAPAETRELKSQIDELTHLGFIRPSFSPWGAPVLF 2958
            PP R IEF IDL+PGT PI   PYRMA  E  E+K Q+D+L   G+IRPS SPWGAPV+F
Sbjct: 724  PPKRDIEFRIDLVPGTTPIHTRPYRMAANELAEVKRQVDDLLQKGYIRPSSSPWGAPVIF 783

Query: 2959 VKKKDGSFRLCIDYRRLNQVTIKNKYPLPRIEDLFDQLQGAQYFSKIDLRSGYHQLKIKE 3138
            V+KKD + R+C+DYR LN VTIKN+YPLPRI+DLFDQL+GA  FSKIDLRSGYHQL+IKE
Sbjct: 784  VEKKDHTQRMCVDYRALNDVTIKNEYPLPRIDDLFDQLKGATVFSKIDLRSGYHQLRIKE 843

Query: 3139 DDIPKTAFRTRLGHYEYLVMPFGLTNAPAAFMDLMNRVFWEYLDKFVIVFIDDILIYXXX 3318
            +DIPKTAF TR G +E  VM FGLTNAPA FM+LMN+VF EYLDKFV+VFIDDILIY   
Sbjct: 844  EDIPKTAFTTRYGLFECTVMSFGLTNAPAFFMNLMNKVFMEYLDKFVVVFIDDILIYSRT 903

Query: 3319 XXXXXXXLKITLQTLQDHQLYAKFSKCEFWLKEVKFLGHVVSSKGVSVDPSKIEAVTSWK 3498
                   L++ L+ L++HQLYAKFSKCEFWL EVKFLGHV+S+ GV+VDPS +E+VT+WK
Sbjct: 904  KEEHEEHLRLALEKLREHQLYAKFSKCEFWLSEVKFLGHVISAGGVAVDPSNVESVTNWK 963

Query: 3499 QPTSVAEIRSFLGLAGYYRRFVEGFSMIASPLTRLTQKNVKYEWDDRCEAAFQELKTRLT 3678
            QP +V+EIRSFLGLAGYYRRF+E FS IA P+TRL QK+VKY+W + CE +FQELK+RL 
Sbjct: 964  QPKTVSEIRSFLGLAGYYRRFIENFSKIAKPMTRLLQKDVKYKWSEECEQSFQELKSRLI 1023

Query: 3679 TAPVLIAPVPGESLVIYTDASGIGLGCVLMQNGKVIAYASRKLKTHEKNYPAHDLELASI 3858
            +AP+LI P P +   +Y DAS  GLGCVLMQ GKV+AYASR+L+ HEKNYP HD+ELA++
Sbjct: 1024 SAPILILPDPKKGFQVYCDASKFGLGCVLMQEGKVVAYASRQLRPHEKNYPTHDIELAAV 1083

Query: 3859 VFSLKIWRHYLYGEKFELFSDHKSLKYIFSQKELNMRQRRWMEYLKDYDFTLHYHPGKAN 4038
            V +LKIWRHYL+G + E+++DHKSLKYIF+Q +LNMRQRRW+E +KDYD  +HYHPGKAN
Sbjct: 1084 VHALKIWRHYLFGTRTEVYTDHKSLKYIFTQPDLNMRQRRWLELIKDYDMGIHYHPGKAN 1143

Query: 4039 VVADALSRRKESVLAQMMLSEWHMLESVIEFVFDSPKNEDRQHSYLAPLRLHNTLTQRIV 4218
            VVADALSR+          +E   L   +   F+          ++A L    TL  ++ 
Sbjct: 1144 VVADALSRK-----GYCNATEGRQLPLELCKEFERLNLGIVGRGFVAALEAKPTLIDQVR 1198

Query: 4219 ESQNLDADVVEHCLKAGDSENHEWNIHADGSIRFQNRLWIPTDEQLRKDILGEAHRSRYS 4398
            E+Q  D D+ E   K    +   +     G++    R+ +P ++ L+  IL EAH + YS
Sbjct: 1199 EAQINDPDIQEIKKKMRRGKAIGFLEDEHGTVWLGERICVPDNKDLKDAILKEAHDTLYS 1258

Query: 4399 IHPGGTKMYRDLRKHFWWPGMKKHIAQYVNRCMTCQQVKAEHQRPAGLLQPLPVAEWKWE 4578
            IHPG TKMY+DL++ FWW  MK+ IA+YV  C  CQ+VKAEHQ+PAGLLQPL + EWKWE
Sbjct: 1259 IHPGSTKMYQDLKERFWWASMKREIAEYVAVCDVCQRVKAEHQKPAGLLQPLKIPEWKWE 1318

Query: 4579 HVTMDFVTGLPKASDGLDAIWVIVDRLTKSAHFLPIKMTHTVDRLSRLYIAEIVRLHGIP 4758
             + MDF+TGLP+ S G D+IWVIVDRLTK AHF+P+K T++  RL+ LY+A IV LHG+P
Sbjct: 1319 EIGMDFITGLPRTSSGHDSIWVIVDRLTKVAHFIPVKTTYSGSRLAELYMARIVCLHGVP 1378

Query: 4759 VSIVSDRDPRFTSQFWKSLQSALGTQLKFSTAFHPQTDGQSERVIQILEDMLRACVLDFG 4938
              IVSDR  +FTS FWK LQ  +G++L FSTA+HPQTDGQ+ERV QILEDMLRAC LDFG
Sbjct: 1379 KKIVSDRGSQFTSNFWKKLQEEMGSKLNFSTAYHPQTDGQTERVNQILEDMLRACALDFG 1438

Query: 4939 GQWKTHLPLVEFSYNNSFQSSIGMAPFEALYGRPCRSPICWTEVGDTILMGPELVEETTE 5118
            G W  +LP  EF YNNS+Q+S+ MAP+EALYGR CR+P+ W + G+  + G +++ E  E
Sbjct: 1439 GSWDKNLPYAEFLYNNSYQASLQMAPYEALYGRKCRTPLLWDQTGERQVFGTDILREAEE 1498

Query: 5119 KIRMVQERIKAAQSRQKNYADKRRRPLEFEVGDMVFLKISPKRGISRFGLKGKLKPRYVG 5298
            K++++QER++ AQSR K+YAD RRR L FE GD V+L+++P RG+ RF  KGKL PR+VG
Sbjct: 1499 KVKIIQERLRVAQSRHKSYADNRRRDLSFEEGDYVYLRVTPLRGVHRFHTKGKLAPRFVG 1558

Query: 5299 PFEITERVGQVAYRLVLPSQLAQIHNVFHVSMLRKYEPDPSHILDWQSLQLEEDVSYEEG 5478
            P++I  R G+VAY+L LP  LA +HNVFHVS L+K    P+   + + ++++ED++Y E 
Sbjct: 1559 PYKIVSRRGEVAYQLELPQSLAGVHNVFHVSQLKKCLRVPTEEANIEQIEVQEDLTYVEK 1618

Query: 5479 PVQIIGRKEKMLRSRVIPLVKV 5544
            P++I+   E+  R+RVI   KV
Sbjct: 1619 PIRILETSERRTRNRVIRFCKV 1640


>gb|ABA92233.1| retrotransposon protein, putative, Ty3-gypsy subclass [Oryza sativa
            Japonica Group]
          Length = 1483

 Score = 1303 bits (3372), Expect = 0.0
 Identities = 672/1404 (47%), Positives = 913/1404 (65%), Gaps = 13/1404 (0%)
 Frame = +1

Query: 1372 LQNFQRLRPPRFGGSSDPAVVEEWVLRTREILITMQCPRDQWVPVAAFQFDGDASHWWRS 1551
            L +F R+RPP F  +++P    +W+    + L  +QC   + V  A+ Q  G A+ WW  
Sbjct: 65   LADFLRVRPPTFSSTTNPVEAGDWLHAVEKKLDLIQCTEQEKVSFASHQLHGPAAEWWDH 124

Query: 1552 ERNVLGDG-PVEWADFERMFLDRFISETAREIKQQEFSGMVQGNLTVTDYELRFTRLSRY 1728
             R    +G P+ W +F   F    I      +K++EF  + QG+ +VT Y   F RL+RY
Sbjct: 125  FRQGRAEGEPITWQEFTAAFKKTHIPAGVVALKKREFRELNQGSRSVTKYLHDFNRLARY 184

Query: 1729 ALELIPTDLQKARRFFRGLRPYLRAKMSVIETTNYRDTVSRAQRVEREDMELQTSRRLTS 1908
            A E + TD ++  +F  GL   L   +   +  +++  V +A R E +   ++  +R   
Sbjct: 185  APEDVRTDEERQEKFLEGLNDELSYALMSTDFRDFQQLVDKAIRQEDKYNRMEQKKRRA- 243

Query: 1909 RPQASFPPRADPAKRPMYSRPSASVPTYSQYQT-----PTPSSYXXXXXXXXXXXXXXLT 2073
               A F  +    +RP        VP+Y Q  +     P    Y              + 
Sbjct: 244  ---AQFKTQQGSNQRPRLVT-GPQVPSYPQGGSSSVVRPQRQFYNNNTGNRGNDNRNVVA 299

Query: 2074 RQIPRSPASQRLIQ----AGPLTCYGCGEAGHMKRNCP---RLXXXXXXXXXXXXRPQGR 2232
            R    +PA  + ++    + P  C+ CG+ GH    CP   R+             P+ R
Sbjct: 300  RPAA-TPAQNQPVRKEQGSKPGVCFNCGDPGHYADKCPKPRRVKNAPAPNNSNAPAPKAR 358

Query: 2233 VYALTHEEYQPSHEVMEGNLILSNMQVHVLIDTGSSNSFISTRLASMLELDVENTGKILS 2412
            V  +   E Q + +V+ G   ++++   VL D+G+++SF+S   AS   ++V + G+ L 
Sbjct: 359  VNHVAAAEAQSAPDVILGTFPVNSIPATVLFDSGATHSFLSKSFASNHGMEVISLGRPLL 418

Query: 2413 LSTPLGNNTIPKSVCKNCVIRLVDQELSTDLILLELNDFDVILGMDWLVRNHAHVDCYSR 2592
            ++T LGN       C +  I + +    + LILLE  D DVILGMDWL R+   +DC SR
Sbjct: 419  VNT-LGNQVFSTQYCPSATIEIEEVPFPSSLILLESKDLDVILGMDWLSRHRGVIDCASR 477

Query: 2593 IVTFKIPGRPILKFMGFKNRIEKYLKSKLNNLTTEEKAVPELVEIPVVRDFRSLFPEELP 2772
             VT        + F+    +    + +++            L EIP+V+D+  +FPE+L 
Sbjct: 478  KVTLTNSIGETVSFLASSPKSHGVILNQV-----------ALQEIPIVQDYPDVFPEDLL 526

Query: 2773 GLPPIRAIEFSIDLIPGTAPISITPYRMAPAETRELKSQIDELTHLGFIRPSFSPWGAPV 2952
            G+PP R IEF IDL+PGT PI   PYRMA  E  E+K Q+D+L   G+IRPS SPWGAPV
Sbjct: 527  GMPPKRDIEFRIDLVPGTNPIHKRPYRMAANELAEVKRQVDDLLQKGYIRPSTSPWGAPV 586

Query: 2953 LFVKKKDGSFRLCIDYRRLNQVTIKNKYPLPRIEDLFDQLQGAQYFSKIDLRSGYHQLKI 3132
            +FV+KKD + R+C+DYR LN+VTIKNKYPLPRI+DLFDQL+GA  FSKIDLRSGYHQL+I
Sbjct: 587  IFVEKKDHTQRMCVDYRALNEVTIKNKYPLPRIDDLFDQLEGATVFSKIDLRSGYHQLRI 646

Query: 3133 KEDDIPKTAFRTRLGHYEYLVMPFGLTNAPAAFMDLMNRVFWEYLDKFVIVFIDDILIYX 3312
            +E+DIPKTAF TR G +E  VM FGLTNAPA FM+LMN+VF EYLDKFV+VFIDDILIY 
Sbjct: 647  REEDIPKTAFTTRYGLFECTVMSFGLTNAPAFFMNLMNKVFMEYLDKFVVVFIDDILIYS 706

Query: 3313 XXXXXXXXXLKITLQTLQDHQLYAKFSKCEFWLKEVKFLGHVVSSKGVSVDPSKIEAVTS 3492
                     L++ L+ L++HQLYAKFSKCEFWL EVKFLGHV+SS GV+VDPS +E+V S
Sbjct: 707  KTKEEHEEHLRLALEKLREHQLYAKFSKCEFWLSEVKFLGHVISSGGVAVDPSNVESVLS 766

Query: 3493 WKQPTSVAEIRSFLGLAGYYRRFVEGFSMIASPLTRLTQKNVKYEWDDRCEAAFQELKTR 3672
            WKQP +V+EIRSFLGLAGYYRRF+E FS IA P+TRL QK VKY+W + CE +FQELK R
Sbjct: 767  WKQPKTVSEIRSFLGLAGYYRRFIENFSKIARPMTRLLQKEVKYKWTEDCERSFQELKKR 826

Query: 3673 LTTAPVLIAPVPGESLVIYTDASGIGLGCVLMQNGKVIAYASRKLKTHEKNYPAHDLELA 3852
            L TAPVLI P   +   +Y DAS +GLGCVLMQ GKV+AYASR+L+ HE NYP HDLELA
Sbjct: 827  LVTAPVLILPDSRKGFQVYCDASRLGLGCVLMQEGKVVAYASRQLRPHENNYPTHDLELA 886

Query: 3853 SIVFSLKIWRHYLYGEKFELFSDHKSLKYIFSQKELNMRQRRWMEYLKDYDFTLHYHPGK 4032
            ++V +LKIWRHYL+G + E+++DHKSLKYIF+Q +LNMRQRRW+E +KDYD  +HYHPGK
Sbjct: 887  AVVHALKIWRHYLFGNRTEIYTDHKSLKYIFTQPDLNMRQRRWLELIKDYDMEIHYHPGK 946

Query: 4033 ANVVADALSRRKESVLAQMMLSEWHMLESVIEFVFDSPKNEDRQHSYLAPLRLHNTLTQR 4212
            ANVVADALSR+    +++     W + +      F+        + ++A L    TL  +
Sbjct: 947  ANVVADALSRKSYCNMSEGRRLPWELCQE-----FEKLNLGIVSNGFVAALEAKPTLFDQ 1001

Query: 4213 IVESQNLDADVVEHCLKAGDSENHEWNIHADGSIRFQNRLWIPTDEQLRKDILGEAHRSR 4392
            + E+Q  D D+ E        +   +     G++    R+ +P ++ L+  I+ EAH + 
Sbjct: 1002 VREAQVNDPDIQEIKKNMRRGKAIGYVEDEQGTVWLGERICVPENKGLKDTIMKEAHETL 1061

Query: 4393 YSIHPGGTKMYRDLRKHFWWPGMKKHIAQYVNRCMTCQQVKAEHQRPAGLLQPLPVAEWK 4572
            YSIHPG TKMY+DL++ FWW  M++ IA+YV  C  CQ+VKAEHQ+PAGLLQPL + EWK
Sbjct: 1062 YSIHPGSTKMYQDLKQQFWWASMRREIAEYVALCDVCQRVKAEHQKPAGLLQPLKIPEWK 1121

Query: 4573 WEHVTMDFVTGLPKASDGLDAIWVIVDRLTKSAHFLPIKMTHTVDRLSRLYIAEIVRLHG 4752
            WE + MDF+TGLP+ S G D+IWV+VDRLTK AHF+P+K T+T ++L+ LY+A +V LHG
Sbjct: 1122 WEEIGMDFITGLPRTSAGHDSIWVVVDRLTKVAHFIPVKTTYTGNKLAELYMARVVCLHG 1181

Query: 4753 IPVSIVSDRDPRFTSQFWKSLQSALGTQLKFSTAFHPQTDGQSERVIQILEDMLRACVLD 4932
            +P  IVSDR  +FTS+FW+ LQ  +GT+L FSTA+HPQTDGQ+ER+ QILEDMLRACVLD
Sbjct: 1182 VPKKIVSDRGSQFTSKFWQKLQLEMGTRLNFSTAYHPQTDGQTERINQILEDMLRACVLD 1241

Query: 4933 FGGQWKTHLPLVEFSYNNSFQSSIGMAPFEALYGRPCRSPICWTEVGDTILMGPELVEET 5112
            FGG W  +LP  EFSYNNS+Q+S+ MAP+EALYGR CR+P+ W + G+  + G +++ E 
Sbjct: 1242 FGGSWDKNLPYAEFSYNNSYQASLQMAPYEALYGRKCRTPLLWDQTGERQVFGTDILREA 1301

Query: 5113 TEKIRMVQERIKAAQSRQKNYADKRRRPLEFEVGDMVFLKISPKRGISRFGLKGKLKPRY 5292
             EK++++QER++ AQSRQK+YAD RRR L FE GD V+L+++P RG+ RF  KGKL PR+
Sbjct: 1302 EEKVKIIQERLRVAQSRQKSYADNRRRDLAFEEGDYVYLRVTPLRGVHRFQTKGKLAPRF 1361

Query: 5293 VGPFEITERVGQVAYRLVLPSQLAQIHNVFHVSMLRKYEPDPSHILDWQSLQLEEDVSYE 5472
            VGPF+I  R G+VAY+L LP  +A IH+VFHVS L+K    P+   D   ++L+ED++Y 
Sbjct: 1362 VGPFKIVSRRGEVAYQLELPPSMAGIHDVFHVSQLKKCLRVPTEEADPDRIELQEDLTYV 1421

Query: 5473 EGPVQIIGRKEKMLRSRVIPLVKV 5544
            E PV+I+   E+  R+ VI   KV
Sbjct: 1422 EKPVRILEVTERNTRNCVIRFCKV 1445


>emb|CAE04932.2| OSJNBa0017P10.9 [Oryza sativa Japonica Group]
          Length = 1752

 Score = 1302 bits (3370), Expect = 0.0
 Identities = 673/1402 (48%), Positives = 912/1402 (65%), Gaps = 11/1402 (0%)
 Frame = +1

Query: 1372 LQNFQRLRPPRFGGSSDPAVVEEWVLRTREILITMQCPRDQWVPVAAFQFDGDASHWWRS 1551
            L  F R+RPP F  +++P    +W+    + L  +QC   + V  A+ Q  G AS WW  
Sbjct: 340  LAEFLRVRPPIFSSTTNPVEAGDWLHTIEKKLDLLQCTDQEKVSFASHQLHGPASEWWDH 399

Query: 1552 ER-NVLGDGPVEWADFERMFLDRFISETAREIKQQEFSGMVQGNLTVTDYELRFTRLSRY 1728
             R N     P+ W +F   F    I      +K++EF  + QG+ +VT+Y   F RL+RY
Sbjct: 400  FRLNRTTAEPITWLEFTAAFRKTHIPSGVVSLKKKEFRSLTQGSRSVTEYLHEFNRLARY 459

Query: 1729 ALELIPTDLQKARRFFRGLRPYLRAKMSVIETTNYRDTVSRAQRVEREDMELQTSRRLTS 1908
            A E +  D ++  +F  GL   L   +   +  +++  V +A R E +   ++  +R   
Sbjct: 460  APEDVRNDEERQEKFLEGLNDELSYPLMTGDYHDFQKLVDKAIRQEDKYNRMEQKKRRI- 518

Query: 1909 RPQASFPPRADPAKRPMYSRPSASVPTYSQYQTPTPSSYXXXXXXXXXXXXXXLTRQIPR 2088
               A F  R    +RP  +     +P     Q  + S                +  Q PR
Sbjct: 519  ---AQFKVRQGNNQRPRLTLGPQPMP-----QGGSSSVVHPQRQFFNNNAGNNIRNQAPR 570

Query: 2089 ---SPASQRLIQ----AGPLTCYGCGEAGHMKRNCP---RLXXXXXXXXXXXXRPQGRVY 2238
               +P  Q+ ++    + P+ C+ CG+ GH    CP   R+             P+ RV 
Sbjct: 571  PVAAPTQQQPVKREQGSKPVVCFNCGDPGHYADKCPKPRRVKVVPAQSNSTVPAPKARVN 630

Query: 2239 ALTHEEYQPSHEVMEGNLILSNMQVHVLIDTGSSNSFISTRLASMLELDVENTGKILSLS 2418
             +   E Q + +V+ G  +++++   VL D+G+++SF+S   A    ++VE+  + L +S
Sbjct: 631  HVAAAEAQDAPDVILGTFLVNSVPATVLFDSGATHSFLSMSFAGNHGMEVEDLRRPLMVS 690

Query: 2419 TPLGNNTIPKSVCKNCVIRLVDQELSTDLILLELNDFDVILGMDWLVRNHAHVDCYSRIV 2598
            TP  N  +      +  I +       +LILLE  D DVILGMDWL R+   +DC +R V
Sbjct: 691  TP-SNQALSLQRSPSVRIEIQGVPFLANLILLESKDLDVILGMDWLARHKGVIDCANRKV 749

Query: 2599 TFKIPGRPILKFMGFKNRIEKYLKSKLNNLTTEEKAVPELVEIPVVRDFRSLFPEELPGL 2778
            T       ++      +   + L+S+LN +T EE        IPVVR++  +FP++LPG+
Sbjct: 750  TLTSNDGRVVTVHALSS---ESLRSRLNQITLEE--------IPVVREYPDVFPDDLPGM 798

Query: 2779 PPIRAIEFSIDLIPGTAPISITPYRMAPAETRELKSQIDELTHLGFIRPSFSPWGAPVLF 2958
            PP R IEF IDL+PGT PI   PYRMA  E  E+K Q+D+L   G+IRPS SPWGAPV+F
Sbjct: 799  PPKRDIEFRIDLVPGTTPIHKRPYRMAANELAEVKRQVDDLLQKGYIRPSSSPWGAPVIF 858

Query: 2959 VKKKDGSFRLCIDYRRLNQVTIKNKYPLPRIEDLFDQLQGAQYFSKIDLRSGYHQLKIKE 3138
            V+KKD + R+C+DYR LN VTIKNKYPLPRI+DLFDQL+GA  FSKIDLRSGYHQL+IKE
Sbjct: 859  VEKKDHTQRMCVDYRTLNDVTIKNKYPLPRIDDLFDQLKGATVFSKIDLRSGYHQLRIKE 918

Query: 3139 DDIPKTAFRTRLGHYEYLVMPFGLTNAPAAFMDLMNRVFWEYLDKFVIVFIDDILIYXXX 3318
            +DIPKTAF TR G +E  VM FGLTNAPA FM+LMN+VF EYLDKFV+VFIDDILIY   
Sbjct: 919  EDIPKTAFTTRYGLFECTVMSFGLTNAPAFFMNLMNKVFMEYLDKFVVVFIDDILIYSRT 978

Query: 3319 XXXXXXXLKITLQTLQDHQLYAKFSKCEFWLKEVKFLGHVVSSKGVSVDPSKIEAVTSWK 3498
                   L++ L+ L++HQLYAKFSKCEFWL EVKFLGHV+S+ GV+VDPS +E+VT+WK
Sbjct: 979  KEEHEEHLRLALEKLREHQLYAKFSKCEFWLSEVKFLGHVISA-GVAVDPSNVESVTNWK 1037

Query: 3499 QPTSVAEIRSFLGLAGYYRRFVEGFSMIASPLTRLTQKNVKYEWDDRCEAAFQELKTRLT 3678
            QP + +EIRSFLGLAGYYRRF+E FS IA P+TRL QK+VKY+W + CE +FQELK RL 
Sbjct: 1038 QPKTASEIRSFLGLAGYYRRFIENFSKIAKPMTRLLQKDVKYKWSEECEQSFQELKNRLI 1097

Query: 3679 TAPVLIAPVPGESLVIYTDASGIGLGCVLMQNGKVIAYASRKLKTHEKNYPAHDLELASI 3858
            +AP+LI P P +   +Y DAS +GLGCVLMQ+GKV+AYASR+L+ HEKNYP HDLELA++
Sbjct: 1098 SAPILILPDPKKGFQVYCDASKLGLGCVLMQDGKVVAYASRQLRPHEKNYPTHDLELAAV 1157

Query: 3859 VFSLKIWRHYLYGEKFELFSDHKSLKYIFSQKELNMRQRRWMEYLKDYDFTLHYHPGKAN 4038
            V +LKIWR+YL+G + E+++DHKSLKYIF+Q +LNMRQRRW+E +KDYD  +HYHPGKAN
Sbjct: 1158 VHALKIWRYYLFGTRTEVYTDHKSLKYIFTQPDLNMRQRRWLELIKDYDMGIHYHPGKAN 1217

Query: 4039 VVADALSRRKESVLAQMMLSEWHMLESVIEFVFDSPKNEDRQHSYLAPLRLHNTLTQRIV 4218
            VVADALSR+          +E   L   +   F+          ++A L    TL  ++ 
Sbjct: 1218 VVADALSRK-----GYCNATEGRQLPLELCKEFERLNLGIVSRGFVAALEAKPTLIDQVR 1272

Query: 4219 ESQNLDADVVEHCLKAGDSENHEWNIHADGSIRFQNRLWIPTDEQLRKDILGEAHRSRYS 4398
            E+Q  D D++E        +   +     G++    R+ +P ++ L+  IL E H + YS
Sbjct: 1273 EAQINDPDILEIKKNMRRGKAIGFLEDEQGTVWLGERICVPDNKDLKDAILKETHDTLYS 1332

Query: 4399 IHPGGTKMYRDLRKHFWWPGMKKHIAQYVNRCMTCQQVKAEHQRPAGLLQPLPVAEWKWE 4578
            IHPG TKMY+DL++ FWW  MK+ IA+YV  C  CQ+VKAEHQ+PAGLLQPL + EWKWE
Sbjct: 1333 IHPGSTKMYQDLKERFWWASMKREIAEYVAVCDVCQRVKAEHQKPAGLLQPLKIPEWKWE 1392

Query: 4579 HVTMDFVTGLPKASDGLDAIWVIVDRLTKSAHFLPIKMTHTVDRLSRLYIAEIVRLHGIP 4758
             + MDF+TGLP+ S G D+IWVIVDRLTK AHF+P+K T++  RL+ LY+A IV LHG+P
Sbjct: 1393 EIGMDFITGLPRTSSGHDSIWVIVDRLTKVAHFIPVKTTYSGSRLAELYMARIVCLHGVP 1452

Query: 4759 VSIVSDRDPRFTSQFWKSLQSALGTQLKFSTAFHPQTDGQSERVIQILEDMLRACVLDFG 4938
              IVSDR  +FTS FWK LQ  +G++L FSTA+HPQTDGQ+ERV QILEDMLRAC LDFG
Sbjct: 1453 KKIVSDRGSQFTSNFWKKLQEEMGSKLNFSTAYHPQTDGQTERVNQILEDMLRACALDFG 1512

Query: 4939 GQWKTHLPLVEFSYNNSFQSSIGMAPFEALYGRPCRSPICWTEVGDTILMGPELVEETTE 5118
            G W  +LP  EFSYNNS+Q+S+ MAP+EALYGR CR+P+ W + G+  + G +++ E  E
Sbjct: 1513 GSWDKNLPYAEFSYNNSYQASLQMAPYEALYGRKCRTPLLWDQTGERQVFGTDILREAEE 1572

Query: 5119 KIRMVQERIKAAQSRQKNYADKRRRPLEFEVGDMVFLKISPKRGISRFGLKGKLKPRYVG 5298
            K++++QER++ AQSR K+YAD RRR L FE GD V+L+++P RG+ RF  KGKL PR+VG
Sbjct: 1573 KVKIIQERLRVAQSRHKSYADNRRRDLSFEEGDYVYLRVTPLRGVHRFHTKGKLAPRFVG 1632

Query: 5299 PFEITERVGQVAYRLVLPSQLAQIHNVFHVSMLRKYEPDPSHILDWQSLQLEEDVSYEEG 5478
            P++I  R G+VAY+L LP  LA +HNVFHVS L+K    P+   + + ++++ED++Y E 
Sbjct: 1633 PYKIVSRRGEVAYQLELPQSLAGVHNVFHVSQLKKCLRVPTEEANLEQIEVQEDLTYVEK 1692

Query: 5479 PVQIIGRKEKMLRSRVIPLVKV 5544
            P+ I+   E+  R+RVI   KV
Sbjct: 1693 PIHILEIDERRTRNRVIRFCKV 1714


>gb|ABA97771.1| retrotransposon protein, putative, Ty3-gypsy subclass [Oryza sativa
            Japonica Group]
          Length = 2174

 Score = 1302 bits (3369), Expect = 0.0
 Identities = 671/1404 (47%), Positives = 918/1404 (65%), Gaps = 13/1404 (0%)
 Frame = +1

Query: 1372 LQNFQRLRPPRFGGSSDPAVVEEWVLRTREILITMQCPRDQWVPVAAFQFDGDASHWWRS 1551
            L  F R+RPP F  +++P    +W+    + L  +QC   + V  A+ Q  G AS WW  
Sbjct: 761  LAEFLRVRPPVFSSTTNPVEASDWLHAIEKKLDLLQCTDQEKVSFASHQLHGPASEWWDH 820

Query: 1552 ER-NVLGDGPVEWADFERMFLDRFISETAREIKQQEFSGMVQGNLTVTDYELRFTRLSRY 1728
             R N     P+ W +F   F    I      +K++EF  + QG+ +VT+Y   F RL+RY
Sbjct: 821  FRLNRTTAEPITWLEFTAAFRKTHIPSGVVSLKKKEFRSLSQGSRSVTEYLHEFNRLARY 880

Query: 1729 ALELIPTDLQKARRFFRGLRPYLRAKMSVIETTNYRDTVSRAQRVEREDMELQTSRRLTS 1908
            A E +  D ++  +F  GL   L   + V +  +++  V +A R E +   ++  +R   
Sbjct: 881  APEDVRNDEERQEKFLGGLNDELSYPLMVGDYPDFQKLVDKAIRQEDKYNRMEQKKRRI- 939

Query: 1909 RPQASFPPRADPAKRPMYSRPSASVPTYSQYQTPTPSSYXXXXXXXXXXXXXXLTRQIPR 2088
               A F  +    ++P  +     +P     Q  + S                +  Q PR
Sbjct: 940  ---AQFKTQQGNNQKPRLTLGPQPMP-----QGGSSSVVRPQRQFFNNNAGNNIRNQAPR 991

Query: 2089 ---SPASQRLIQAG----PLTCYGCGEAGHMKRNCP---RLXXXXXXXXXXXXRPQGRVY 2238
               +PA Q+  +      P+ C+ CG+ GH    CP   R+              + RV 
Sbjct: 992  PVAAPAQQQPAKREQGNKPVVCFNCGDPGHYADKCPKPRRVKVVPAQNNSAVPASKARVN 1051

Query: 2239 ALTHEEYQPSHEVMEGNLILSNMQVHVLIDTGSSNSFISTRLASMLELDVENTGKILSLS 2418
             +   E Q + +V+ G  +++++   VL D+G+++SF+ST  A    ++VE+  + L +S
Sbjct: 1052 HVAAAEAQDAPDVILGTFLVNSVPATVLFDSGATHSFLSTSFAGNHGMEVEDLRRPLMVS 1111

Query: 2419 TPLGNNTIPKSVCKNCVIRLVDQELSTDLILLELNDFDVILGMDWLVRNHAHVDCYSRIV 2598
            TP  N  +      +  I +       +LILL+  D DVILGMDWL R+   +DC +R V
Sbjct: 1112 TP-SNQALSLQRSPSVRIEIQGVPFLANLILLKSKDLDVILGMDWLARHKGVIDCANRKV 1170

Query: 2599 TFKIPGRPILKFMGFKNRIEKYLKSKLNNLTTEEKAVPELVEIPVVRDFRSLFPEELPGL 2778
            T       ++      +   + L+S+LN +T EE        IP+VR++  +FP++LPG+
Sbjct: 1171 TLNSYDGRVVTVHALSS---ESLRSRLNQITLEE--------IPIVREYPDVFPDDLPGM 1219

Query: 2779 PPIRAIEFSIDLIPGTAPISITPYRMAPAETRELKSQIDELTHLGFIRPSFSPWGAPVLF 2958
            PP R IEF IDL+PGT PI   PYRMA  E  E+K Q+D+L   G+IRPS SPWGAPV+F
Sbjct: 1220 PPKRDIEFRIDLVPGTTPIHKRPYRMAANELAEVKRQVDDLLQKGYIRPSSSPWGAPVIF 1279

Query: 2959 VKKKDGSFRLCIDYRRLNQVTIKNKYPLPRIEDLFDQLQGAQYFSKIDLRSGYHQLKIKE 3138
            V+KKD + R+C+DYR LN VTIKNKYPLPRI+DLFDQL+GA  FSKIDLRSGYHQL+IKE
Sbjct: 1280 VEKKDHTQRMCVDYRALNDVTIKNKYPLPRIDDLFDQLKGATVFSKIDLRSGYHQLRIKE 1339

Query: 3139 DDIPKTAFRTRLGHYEYLVMPFGLTNAPAAFMDLMNRVFWEYLDKFVIVFIDDILIYXXX 3318
            +DIPKT F TR G +E  VM FGLTNAPA FM+LMN+VF EYLDKFV+VFIDDILIY   
Sbjct: 1340 EDIPKTTFTTRYGLFECTVMSFGLTNAPAFFMNLMNKVFMEYLDKFVVVFIDDILIYSRT 1399

Query: 3319 XXXXXXXLKITLQTLQDHQLYAKFSKCEFWLKEVKFLGHVVSSKGVSVDPSKIEAVTSWK 3498
                   L++ L+ L++HQLYAKFSKCEFWL EVKFLGHV+S+ GV+VDPS +E+VT+WK
Sbjct: 1400 KEEHEEHLRLALEKLREHQLYAKFSKCEFWLSEVKFLGHVISAGGVAVDPSNVESVTNWK 1459

Query: 3499 QPTSVAEIRSFLGLAGYYRRFVEGFSMIASPLTRLTQKNVKYEWDDRCEAAFQELKTRLT 3678
            QP +V+EIRSFLGLAGYYRRF+E FS IA P+TRL QK+VKY+W + CE +FQELK+RL 
Sbjct: 1460 QPKTVSEIRSFLGLAGYYRRFIENFSKIAKPMTRLLQKDVKYKWSEECEQSFQELKSRLI 1519

Query: 3679 TAPVLIAPVPGESLVIYTDASGIGLGCVLMQNGKVIAYASRKLKTHEKNYPAHDLELASI 3858
            +AP+LI P P +   ++ DAS +GLGCVLMQ+GKV+AYASR+L+ HEKNYP HD+ELA++
Sbjct: 1520 SAPILILPDPKKGFQVHCDASKLGLGCVLMQDGKVVAYASRQLRPHEKNYPTHDIELAAV 1579

Query: 3859 VFSLKIWRHYLYGEKFELFSDHKSLKYIFSQKELNMRQRRWMEYLKDYDFTLHYHPGKAN 4038
            V +LKIW HYL+G + E+++DHKSLKYIF+Q +LNMRQRRW+E +KDYD  +HYHPGKAN
Sbjct: 1580 VHALKIWHHYLFGTRTEVYTDHKSLKYIFTQPDLNMRQRRWLELIKDYDMGIHYHPGKAN 1639

Query: 4039 VVADALSRRKESVLAQMMLSEWHMLESVIEFVFDSPKNEDRQHSYLAPLRLHNTLTQRIV 4218
            VVADALSR+          +E   L   +   F+          ++A L    TL  ++ 
Sbjct: 1640 VVADALSRK-----GYCNATEGRQLPLELCKEFERLNLGIVDRGFVAALEAKPTLIDQVR 1694

Query: 4219 ESQNLDADV--VEHCLKAGDSENHEWNIHADGSIRFQNRLWIPTDEQLRKDILGEAHRSR 4392
            E+Q  D D+  ++  ++ G +     + H  G++    R+ +P ++ L+  IL EAH + 
Sbjct: 1695 EAQINDPDIQEIKKNMRRGKAIGFLEDEH--GTVWLGERICVPDNKDLKDAILKEAHDTL 1752

Query: 4393 YSIHPGGTKMYRDLRKHFWWPGMKKHIAQYVNRCMTCQQVKAEHQRPAGLLQPLPVAEWK 4572
            YSIHPG TKMY+DL++ FWW  MK+ IA+YV  C  CQ+VKAEHQ+PAGLLQPL + EWK
Sbjct: 1753 YSIHPGSTKMYQDLKERFWWASMKREIAEYVAVCDVCQRVKAEHQKPAGLLQPLKIPEWK 1812

Query: 4573 WEHVTMDFVTGLPKASDGLDAIWVIVDRLTKSAHFLPIKMTHTVDRLSRLYIAEIVRLHG 4752
            WE + MDF+TGLP+ S G D+IWVIVDRLTK AHF+P+K T++  RL+ LY+A IV LHG
Sbjct: 1813 WEEIGMDFITGLPRTSSGHDSIWVIVDRLTKVAHFIPVKTTYSGSRLAELYMARIVCLHG 1872

Query: 4753 IPVSIVSDRDPRFTSQFWKSLQSALGTQLKFSTAFHPQTDGQSERVIQILEDMLRACVLD 4932
            +P  IVSDR  +FTS FWK LQ  +G++L FSTA+HPQTDGQ+ERV QILEDMLRAC LD
Sbjct: 1873 VPKKIVSDRGSQFTSNFWKKLQEEMGSKLNFSTAYHPQTDGQTERVNQILEDMLRACALD 1932

Query: 4933 FGGQWKTHLPLVEFSYNNSFQSSIGMAPFEALYGRPCRSPICWTEVGDTILMGPELVEET 5112
            FGG W  +LP  EFSYNNS+Q+S+ MAP+EALYGR CR+P+ W + G+  + G +++ E 
Sbjct: 1933 FGGSWDKNLPYAEFSYNNSYQASLQMAPYEALYGRKCRTPLLWDQTGERQVFGTDILREA 1992

Query: 5113 TEKIRMVQERIKAAQSRQKNYADKRRRPLEFEVGDMVFLKISPKRGISRFGLKGKLKPRY 5292
             EK++++QER++ AQSR K+YAD RRR L FE GD V+L+++P RG+ RF  KGKL PR+
Sbjct: 1993 EEKVKIIQERLRVAQSRHKSYADNRRRDLSFEEGDYVYLRVTPLRGVHRFHTKGKLAPRF 2052

Query: 5293 VGPFEITERVGQVAYRLVLPSQLAQIHNVFHVSMLRKYEPDPSHILDWQSLQLEEDVSYE 5472
            VGP++I  R G+VAY+L LP  LA +HNVFHVS L+K    P+   + + ++++ED++Y 
Sbjct: 2053 VGPYKIVSRRGEVAYQLELPQSLAGVHNVFHVSQLKKCLRVPTEEANIEQIEVQEDLTYV 2112

Query: 5473 EGPVQIIGRKEKMLRSRVIPLVKV 5544
            E P++I+   E+  R+RVI   KV
Sbjct: 2113 EKPIRILETSERRTRNRVIRFCKV 2136



 Score =  101 bits (252), Expect = 4e-18
 Identities = 68/274 (24%), Positives = 118/274 (43%), Gaps = 5/274 (1%)
 Frame = +1

Query: 1372 LQNFQRLRPPRFGGSSDPAVVEEWVLRTREILITMQCPRDQWVPVAAFQFDGDASHWWRS 1551
            L +F R+RPP F  +++P    +W+    + L  +QC   + V  A+ Q  G A+ WW  
Sbjct: 67   LADFLRVRPPTFSSTTNPVEAGDWLHAVEKKLDLIQCTEQEKVSFASHQLHGPAAEWWDH 126

Query: 1552 ERNVLGDGP-VEWADFERMFLDRFISETAREIKQQEFSGMVQGNLTVTDYELRFTRLSRY 1728
             R    +G  + W +F   F    I      +K++EF  + QG+ +VT+Y     RL+RY
Sbjct: 127  FRQGRAEGELITWQEFTTAFKKTHIPSGVVALKKREFRALNQGSRSVTEYLHDVNRLARY 186

Query: 1729 ALELIPTDLQKARRFFRGLRPYLRAKMSVIETTNYRDTVSRAQRVEREDMELQTSRRLTS 1908
            A E + TD ++  +F  GL   L   +   +  +++  V +A R E +   ++  +R  +
Sbjct: 187  APEDVRTDEERQEKFLEGLNDELSYALMSTDFRDFQQLVDKAIRQEDKYNRMEQKKRRAA 246

Query: 1909 RPQASFPPRADPAKRPMYSRPSASVPTYSQYQTPTPSSYXXXXXXXXXXXXXXLTRQIPR 2088
            + +A       P        PS      S    P    Y              + R    
Sbjct: 247  QFKAQQGSNQRPRLVTGPQAPSYPQGGSSSVVRPQRQFYNNNTGNRGNDNRNMVARP-AA 305

Query: 2089 SPASQRLIQ----AGPLTCYGCGEAGHMKRNCPR 2178
            +PA  + ++    + P+ C+ CG+ GH    CP+
Sbjct: 306  TPAQNQPVRKEQGSKPVICFNCGDPGHYADKCPK 339



 Score = 61.2 bits (147), Expect = 5e-06
 Identities = 38/102 (37%), Positives = 52/102 (50%)
 Frame = +1

Query: 2467 VIRLVDQELSTDLILLELNDFDVILGMDWLVRNHAHVDCYSRIVTFKIPGRPILKFMGFK 2646
            V+ + +    + LILLE  D DVILGMDWL R+   +DC +R VT        + F    
Sbjct: 376  VLEIEEVLFPSSLILLESKDLDVILGMDWLSRHRGVIDCANRKVTLTSSNWETVSFFVSS 435

Query: 2647 NRIEKYLKSKLNNLTTEEKAVPELVEIPVVRDFRSLFPEELP 2772
                KY    LN +         L EIP+V+D+  +FPE+LP
Sbjct: 436  ---PKYHGVNLNQVA--------LQEIPIVQDYPDVFPEDLP 466


>emb|CAE04776.3| OSJNBb0115I21.3 [Oryza sativa Japonica Group]
          Length = 1779

 Score = 1301 bits (3368), Expect = 0.0
 Identities = 672/1402 (47%), Positives = 911/1402 (64%), Gaps = 11/1402 (0%)
 Frame = +1

Query: 1372 LQNFQRLRPPRFGGSSDPAVVEEWVLRTREILITMQCPRDQWVPVAAFQFDGDASHWWRS 1551
            L  F R+RPP F  +++P    +W+    + L  +QC     V  A+ Q  G AS WW  
Sbjct: 366  LAEFLRVRPPVFSSTTNPVEASDWLHAIEKKLDLLQCTDQDKVSFASHQLHGPASEWWDH 425

Query: 1552 ER-NVLGDGPVEWADFERMFLDRFISETAREIKQQEFSGMVQGNLTVTDYELRFTRLSRY 1728
             R N     P+ W +F   F    I      +K++EF  + QG+ +VT+Y   F RL+RY
Sbjct: 426  FRLNRTTAEPITWLEFTAAFRKTHIPSGVVSLKKKEFRSLTQGSRSVTEYLHEFNRLARY 485

Query: 1729 ALELIPTDLQKARRFFRGLRPYLRAKMSVIETTNYRDTVSRAQRVEREDMELQTSRRLTS 1908
            A E +  D +   +F  GL   L   + V +  +++  V +A R E +   ++  +R   
Sbjct: 486  APEDVRNDEECQEKFLGGLNDELSYPLMVGDYPDFQKLVDKAIRQEDKYNRMEQKKRRI- 544

Query: 1909 RPQASFPPRADPAKRPMYSRPSASVPTYSQYQTPTPSSYXXXXXXXXXXXXXXLTRQIPR 2088
               A F  +    ++P  +    SVP     Q  + S                +  Q PR
Sbjct: 545  ---AQFKTQQGNNQKPRLTLGPQSVP-----QGGSSSVVRPQRQFFNNNAGNNIRNQAPR 596

Query: 2089 S---PASQRLIQAG----PLTCYGCGEAGHMKRNCP---RLXXXXXXXXXXXXRPQGRVY 2238
                PA Q+  +      P+ C+ CG+ GH    CP   R+              + RV 
Sbjct: 597  PVAVPAQQQPAKREQGNKPVVCFNCGDPGHYADKCPKPRRVKVVPAQNNSAVPASKARVN 656

Query: 2239 ALTHEEYQPSHEVMEGNLILSNMQVHVLIDTGSSNSFISTRLASMLELDVENTGKILSLS 2418
             +   E Q + +V+ G  +++++   VL D+G+++SF+S   A    ++VE+  + L +S
Sbjct: 657  HVAAAEAQGAPDVILGTFLVNSVPATVLFDSGATHSFLSMSFAGNHGMEVEDLRRPLMVS 716

Query: 2419 TPLGNNTIPKSVCKNCVIRLVDQELSTDLILLELNDFDVILGMDWLVRNHAHVDCYSRIV 2598
            TP  N  +      +  I +       +LILL+  D DVILGMDWL R+   +DC +R V
Sbjct: 717  TP-SNQALSLQRSPSVRIEIQGVPFLANLILLKSKDLDVILGMDWLARHKGVIDCANRKV 775

Query: 2599 TFKIPGRPILKFMGFKNRIEKYLKSKLNNLTTEEKAVPELVEIPVVRDFRSLFPEELPGL 2778
            T       ++      +   + L+S+LN +T EE        IP+VR++  +FP++LPG+
Sbjct: 776  TLNSYDGRVVTVHALSS---ESLRSRLNQITLEE--------IPIVREYPDVFPDDLPGM 824

Query: 2779 PPIRAIEFSIDLIPGTAPISITPYRMAPAETRELKSQIDELTHLGFIRPSFSPWGAPVLF 2958
            PP R IEF IDL+PGT PI   PYRMA  E  E+K Q+D+L   G+IRPS SPWGAPV+F
Sbjct: 825  PPKRDIEFRIDLVPGTTPIHKRPYRMAANELAEVKRQVDDLLQKGYIRPSSSPWGAPVIF 884

Query: 2959 VKKKDGSFRLCIDYRRLNQVTIKNKYPLPRIEDLFDQLQGAQYFSKIDLRSGYHQLKIKE 3138
            V+KKD + R+C+DYR LN VTIKNKYPLPRI+DLFDQL+GA  FSKIDLRSGYHQL+IKE
Sbjct: 885  VEKKDHTQRMCVDYRALNDVTIKNKYPLPRIDDLFDQLKGATVFSKIDLRSGYHQLRIKE 944

Query: 3139 DDIPKTAFRTRLGHYEYLVMPFGLTNAPAAFMDLMNRVFWEYLDKFVIVFIDDILIYXXX 3318
            +DIPKTAF TR G +E  VM FGLTNAPA FM+LMN+VF EYLDKFV+VFIDDILIY   
Sbjct: 945  EDIPKTAFTTRYGLFECTVMSFGLTNAPAFFMNLMNKVFMEYLDKFVVVFIDDILIYSRT 1004

Query: 3319 XXXXXXXLKITLQTLQDHQLYAKFSKCEFWLKEVKFLGHVVSSKGVSVDPSKIEAVTSWK 3498
                   L++ L+ L++HQLYAKFSKCEFWL EVKFLGHV+S+ GV+VDPS +E+VT+WK
Sbjct: 1005 KEEHEEHLRLALEKLREHQLYAKFSKCEFWLSEVKFLGHVISAGGVAVDPSNVESVTNWK 1064

Query: 3499 QPTSVAEIRSFLGLAGYYRRFVEGFSMIASPLTRLTQKNVKYEWDDRCEAAFQELKTRLT 3678
            QP +V+EIRSFLGLAGYYRRF+E FS IA P+TRL QK+VKY+W + CE +FQELK+RL 
Sbjct: 1065 QPKTVSEIRSFLGLAGYYRRFIENFSKIAKPMTRLLQKDVKYKWSEECEQSFQELKSRLI 1124

Query: 3679 TAPVLIAPVPGESLVIYTDASGIGLGCVLMQNGKVIAYASRKLKTHEKNYPAHDLELASI 3858
            +AP+LI P P +   +Y DAS +GLGCVLMQ+GKV+AYASR+L+ HEKNYP HD+ELA++
Sbjct: 1125 SAPILILPDPKKGFQVYCDASKLGLGCVLMQDGKVVAYASRQLRPHEKNYPTHDIELAAV 1184

Query: 3859 VFSLKIWRHYLYGEKFELFSDHKSLKYIFSQKELNMRQRRWMEYLKDYDFTLHYHPGKAN 4038
            V +LKIWRHYL+G + E+++DHKSLKYIF+Q +LNMRQRRW+E +KDYD  +HYHPGKAN
Sbjct: 1185 VHALKIWRHYLFGTRTEVYTDHKSLKYIFTQPDLNMRQRRWLELIKDYDMGIHYHPGKAN 1244

Query: 4039 VVADALSRRKESVLAQMMLSEWHMLESVIEFVFDSPKNEDRQHSYLAPLRLHNTLTQRIV 4218
            VV DALSR+          +E   L   +   F+          ++A L    TL  ++ 
Sbjct: 1245 VVVDALSRK-----GYCNATEGRQLPLELCKEFERLNLGIVGRGFVAALEAKPTLIDQVR 1299

Query: 4219 ESQNLDADVVEHCLKAGDSENHEWNIHADGSIRFQNRLWIPTDEQLRKDILGEAHRSRYS 4398
            E+Q  D D+ E        +   +     G++    R+ +P ++ L+  +L EAH + YS
Sbjct: 1300 EAQINDPDIQEIKKNMRRGKAIGFLEDEQGTVWLGERICVPDNKDLKDAVLKEAHDTLYS 1359

Query: 4399 IHPGGTKMYRDLRKHFWWPGMKKHIAQYVNRCMTCQQVKAEHQRPAGLLQPLPVAEWKWE 4578
            IHPG TKMY+DL++ FWW  MK+ IA+YV  C  CQ+VKAEHQ+PAGLLQPL + EWKWE
Sbjct: 1360 IHPGSTKMYQDLKERFWWASMKREIAEYVAVCDVCQRVKAEHQKPAGLLQPLKIPEWKWE 1419

Query: 4579 HVTMDFVTGLPKASDGLDAIWVIVDRLTKSAHFLPIKMTHTVDRLSRLYIAEIVRLHGIP 4758
             + MDF+TGLP+ S G D+IWVIVDRLTK AHF+P+K T++  RL+ LY+A IV LHG+P
Sbjct: 1420 EIGMDFITGLPRTSSGHDSIWVIVDRLTKVAHFIPVKTTYSGSRLAELYMARIVCLHGVP 1479

Query: 4759 VSIVSDRDPRFTSQFWKSLQSALGTQLKFSTAFHPQTDGQSERVIQILEDMLRACVLDFG 4938
              IVSDR  +FTS FWK LQ  +G++L FSTA+HPQTDGQ+ERV QILEDMLRAC LDFG
Sbjct: 1480 KKIVSDRGSQFTSNFWKKLQEEMGSKLNFSTAYHPQTDGQTERVNQILEDMLRACALDFG 1539

Query: 4939 GQWKTHLPLVEFSYNNSFQSSIGMAPFEALYGRPCRSPICWTEVGDTILMGPELVEETTE 5118
            G W  +LP  EFSYNNS+Q+S+ MAP+EALYGR CR+P+ W + G+  + G +++ E  E
Sbjct: 1540 GSWDKNLPYAEFSYNNSYQASLQMAPYEALYGRKCRTPLLWDQTGERQVFGTDILREAEE 1599

Query: 5119 KIRMVQERIKAAQSRQKNYADKRRRPLEFEVGDMVFLKISPKRGISRFGLKGKLKPRYVG 5298
            K++++QER++ AQSR K+YAD RRR L FE GD V+L+++P RG+ RF  KGKL PR+VG
Sbjct: 1600 KVKVIQERLRVAQSRHKSYADNRRRDLSFEEGDYVYLRVTPLRGVHRFHTKGKLAPRFVG 1659

Query: 5299 PFEITERVGQVAYRLVLPSQLAQIHNVFHVSMLRKYEPDPSHILDWQSLQLEEDVSYEEG 5478
            P++I  R G+VAY+L LP  LA +HNVFHVS L+K    P+   + + ++++ED++Y E 
Sbjct: 1660 PYKIVSRRGEVAYQLELPQSLAGVHNVFHVSQLKKCLRVPTEEANIEQIEVQEDLTYVEK 1719

Query: 5479 PVQIIGRKEKMLRSRVIPLVKV 5544
            P++I+   E+  R+RVI   KV
Sbjct: 1720 PIRILETNERRTRNRVIRFCKV 1741


>gb|ABA95022.1| retrotransposon protein, putative, Ty3-gypsy subclass [Oryza sativa
            Japonica Group]
          Length = 1473

 Score = 1301 bits (3367), Expect = 0.0
 Identities = 671/1402 (47%), Positives = 913/1402 (65%), Gaps = 11/1402 (0%)
 Frame = +1

Query: 1372 LQNFQRLRPPRFGGSSDPAVVEEWVLRTREILITMQCPRDQWVPVAAFQFDGDASHWWRS 1551
            L  F  +RPP F  +++P    +W+    + L  +QC   + V  A+ Q  G AS WW  
Sbjct: 60   LAEFLHVRPPVFSSTTNPVEAGDWLHAIEKKLDLLQCTDQEKVSFASHQLHGPASEWWDH 119

Query: 1552 ER-NVLGDGPVEWADFERMFLDRFISETAREIKQQEFSGMVQGNLTVTDYELRFTRLSRY 1728
             R N     P+ W +F   F    I      +K++EF  + QG+ +VT+Y   F RL+RY
Sbjct: 120  FRLNRTTAEPITWLEFTAAFRKTHIPSGVVSLKKKEFRSLTQGSRSVTEYLHEFNRLARY 179

Query: 1729 ALELIPTDLQKARRFFRGLRPYLRAKMSVIETTNYRDTVSRAQRVEREDMELQTSRRLTS 1908
            A E +  D ++  +F  GL   L   +   + ++++  V +A R E +   ++  +    
Sbjct: 180  APEDVRNDEERQEKFLEGLNDELSYPLMTGDYSDFQKLVDKAIRQEDKYNRMEQKKCRI- 238

Query: 1909 RPQASFPPRADPAKRPMYSRPSASVPTYSQYQTPTPSSYXXXXXXXXXXXXXXLTRQIPR 2088
               A F  +    ++P  +  S S+P     Q  + S                +  Q PR
Sbjct: 239  ---AHFKAQQGNNQKPRLTLGSQSMP-----QGGSSSVVRPQRQFFNNNAGNNIRNQAPR 290

Query: 2089 ---SPASQRLIQ----AGPLTCYGCGEAGHMKRNCP---RLXXXXXXXXXXXXRPQGRVY 2238
               +PA Q+ ++    + P+ C+ CG+ GH    CP   R+              + RV 
Sbjct: 291  PVAAPAQQQPVKREQGSKPVVCFNCGDPGHYADKCPKPRRVKVVPAQSNSTAPASKARVN 350

Query: 2239 ALTHEEYQPSHEVMEGNLILSNMQVHVLIDTGSSNSFISTRLASMLELDVENTGKILSLS 2418
             +   E Q + +V+ G   ++ +   VL D+G+++SF+S   A    ++VE+  + L +S
Sbjct: 351  HVAAAEAQDAPDVILGTFPVNLVPATVLFDSGATHSFLSMSFAGNHGMEVEDLRRPLMVS 410

Query: 2419 TPLGNNTIPKSVCKNCVIRLVDQELSTDLILLELNDFDVILGMDWLVRNHAHVDCYSRIV 2598
            TP  N  +      +  I +       +LILLE  D DVILGMDWL R+   +DC +R V
Sbjct: 411  TP-SNQALSLQRSPSVRIEIKGVPFLANLILLESKDLDVILGMDWLARHKGVIDCANRKV 469

Query: 2599 TFKIPGRPILKFMGFKNRIEKYLKSKLNNLTTEEKAVPELVEIPVVRDFRSLFPEELPGL 2778
            T       ++      +   + L+S+LN +T EE        IP+VR++  +FP++LPG+
Sbjct: 470  TLTSNDGQVVTVHALSS---ESLRSRLNQITLEE--------IPIVREYSDVFPDDLPGM 518

Query: 2779 PPIRAIEFSIDLIPGTAPISITPYRMAPAETRELKSQIDELTHLGFIRPSFSPWGAPVLF 2958
            PP R IEF IDL+PGT PI   PYRMA  E  E+K Q+D+L   G+IRPS SPWGAPV+F
Sbjct: 519  PPKRDIEFRIDLVPGTTPIHKRPYRMAANELAEVKRQVDDLLQKGYIRPSSSPWGAPVIF 578

Query: 2959 VKKKDGSFRLCIDYRRLNQVTIKNKYPLPRIEDLFDQLQGAQYFSKIDLRSGYHQLKIKE 3138
            V+KKD + R+C+DYR LN VTIKNKYPLPRI+DLFDQL+GA  FSKIDLRSGYHQL+IKE
Sbjct: 579  VEKKDHTQRMCVDYRALNDVTIKNKYPLPRIDDLFDQLKGATVFSKIDLRSGYHQLRIKE 638

Query: 3139 DDIPKTAFRTRLGHYEYLVMPFGLTNAPAAFMDLMNRVFWEYLDKFVIVFIDDILIYXXX 3318
            +DIPKTAF TR G +E  VM FGLTNAPA FM+LMN+VF EYLDKFV+VFIDDILIY   
Sbjct: 639  EDIPKTAFTTRYGLFECTVMSFGLTNAPAFFMNLMNKVFMEYLDKFVVVFIDDILIYSRT 698

Query: 3319 XXXXXXXLKITLQTLQDHQLYAKFSKCEFWLKEVKFLGHVVSSKGVSVDPSKIEAVTSWK 3498
                   L++ L+ L++HQLYAKFSKCEFWL EVKFLGHV+S+ GV+VDPS +E+VT+WK
Sbjct: 699  KEEHEEHLRLALEKLREHQLYAKFSKCEFWLSEVKFLGHVISAGGVAVDPSNVESVTNWK 758

Query: 3499 QPTSVAEIRSFLGLAGYYRRFVEGFSMIASPLTRLTQKNVKYEWDDRCEAAFQELKTRLT 3678
            QP +V+EIRSFLGLAGYYRRF+E FS IA P+TRL QK+VKY+W + CE +FQELK+RL 
Sbjct: 759  QPKTVSEIRSFLGLAGYYRRFIENFSKIAKPMTRLLQKDVKYKWSEECEQSFQELKSRLV 818

Query: 3679 TAPVLIAPVPGESLVIYTDASGIGLGCVLMQNGKVIAYASRKLKTHEKNYPAHDLELASI 3858
            +AP+LI P P +   +Y DAS +GLGCVLMQ+GKV+AYASR+L+ HEKNYP HDLELA++
Sbjct: 819  SAPILILPNPKKGFQVYCDASKLGLGCVLMQDGKVVAYASRQLRPHEKNYPTHDLELAAV 878

Query: 3859 VFSLKIWRHYLYGEKFELFSDHKSLKYIFSQKELNMRQRRWMEYLKDYDFTLHYHPGKAN 4038
            V +LKIWRHYL+G + E+++DHKSLKYIF+Q +LNMRQRRW+E +KDYD  +HYHPGKAN
Sbjct: 879  VHALKIWRHYLFGTRTEVYTDHKSLKYIFTQPDLNMRQRRWLELIKDYDMGIHYHPGKAN 938

Query: 4039 VVADALSRRKESVLAQMMLSEWHMLESVIEFVFDSPKNEDRQHSYLAPLRLHNTLTQRIV 4218
            VVADALSR+          +E   L   +   F+          ++A L    TL  ++ 
Sbjct: 939  VVADALSRK-----GYCNATEGRQLPLELCKEFERLNLGIVSRGFVAALEAKPTLIDQVR 993

Query: 4219 ESQNLDADVVEHCLKAGDSENHEWNIHADGSIRFQNRLWIPTDEQLRKDILGEAHRSRYS 4398
            E+Q  D D+ E        +   +     G++    R+ +P ++ L+  IL EAH + YS
Sbjct: 994  EAQINDPDIQEIKKNMRRGKAIGFLEDEQGTVWLGERICVPDNKDLKDAILKEAHDTLYS 1053

Query: 4399 IHPGGTKMYRDLRKHFWWPGMKKHIAQYVNRCMTCQQVKAEHQRPAGLLQPLPVAEWKWE 4578
            IHPG TKMY+DL++ FWW  MK+ IA+YV  C  CQ+VKAEHQ+PAGLLQPL + EWKWE
Sbjct: 1054 IHPGSTKMYQDLKERFWWASMKREIAEYVAVCDVCQRVKAEHQKPAGLLQPLKIPEWKWE 1113

Query: 4579 HVTMDFVTGLPKASDGLDAIWVIVDRLTKSAHFLPIKMTHTVDRLSRLYIAEIVRLHGIP 4758
             + MDF+TGLP+ S G D+IWVIVDRLTK AHF+P+K T++  RL+ LY+A IV LHG+P
Sbjct: 1114 EIGMDFITGLPRTSSGHDSIWVIVDRLTKVAHFIPVKTTYSGSRLAELYMARIVCLHGVP 1173

Query: 4759 VSIVSDRDPRFTSQFWKSLQSALGTQLKFSTAFHPQTDGQSERVIQILEDMLRACVLDFG 4938
              IVSDR  +FTS FWK LQ  +G++L FS A+HPQTDGQ+ERV QILEDMLRAC LDFG
Sbjct: 1174 KKIVSDRGSQFTSNFWKKLQEEMGSKLNFSIAYHPQTDGQTERVNQILEDMLRACALDFG 1233

Query: 4939 GQWKTHLPLVEFSYNNSFQSSIGMAPFEALYGRPCRSPICWTEVGDTILMGPELVEETTE 5118
            G W  +LP  EFSYNNS+Q+S+ MAP+EALYGR CR+P+ W + G+  + G +++ E  E
Sbjct: 1234 GSWDKNLPYAEFSYNNSYQASLQMAPYEALYGRKCRTPLLWDQTGERQVFGTDILREAEE 1293

Query: 5119 KIRMVQERIKAAQSRQKNYADKRRRPLEFEVGDMVFLKISPKRGISRFGLKGKLKPRYVG 5298
            K++++QER++ AQSR K+YAD RRR L FE G+ V+L+++P RG+ RF  KGKL PR+VG
Sbjct: 1294 KVKVIQERLRVAQSRHKSYADNRRRDLSFEEGEYVYLRVTPLRGVHRFHTKGKLAPRFVG 1353

Query: 5299 PFEITERVGQVAYRLVLPSQLAQIHNVFHVSMLRKYEPDPSHILDWQSLQLEEDVSYEEG 5478
            P++I  R G+VAY+L LP  LA +HNVFHVS L+K    P+   + + ++++ED++Y E 
Sbjct: 1354 PYKIVSRRGEVAYQLELPQSLAGVHNVFHVSQLKKCLRVPTEEANIEQIEVQEDLTYVEK 1413

Query: 5479 PVQIIGRKEKMLRSRVIPLVKV 5544
            P++I+   E+  R+RVI   KV
Sbjct: 1414 PIRILETNERRTRNRVIRFCKV 1435


>dbj|BAH79971.1| hypothetical protein [Oryza sativa Indica Group]
          Length = 1477

 Score = 1301 bits (3367), Expect = 0.0
 Identities = 674/1404 (48%), Positives = 912/1404 (64%), Gaps = 13/1404 (0%)
 Frame = +1

Query: 1372 LQNFQRLRPPRFGGSSDPAVVEEWVLRTREILITMQCPRDQWVPVAAFQFDGDASHWWRS 1551
            L  F R+RPP F  +S+P    +W+    + L  +QC   + V  A+ Q  G AS WW  
Sbjct: 63   LAEFLRVRPPVFSSTSNPVEASDWLHAIEKKLDLLQCTDQEKVSFASHQLHGPASEWWDH 122

Query: 1552 ER-NVLGDGPVEWADFERMFLDRFISETAREIKQQEFSGMVQGNLTVTDYELRFTRLSRY 1728
             R N     P  W +F   F    I      +K++EF  + QG+ +VT+Y   F RL+RY
Sbjct: 123  FRLNRTTAEPTTWLEFTAAFRKTHIPSGVVSLKKKEFRSLTQGSRSVTEYLHEFNRLARY 182

Query: 1729 ALELIPTDLQKARRFFRGLRPYLRAKMSVIETTNYRDTVSRAQRVE-REDMELQTSRRLT 1905
            A E +  D ++  +F  GL   L   + V +  +++  V +A R E + +   Q  RR+ 
Sbjct: 183  APEDVRNDEERQEKFLGGLNDELSYPLMVGDYPDFQKLVDKAIRQEDKYNFMEQKKRRI- 241

Query: 1906 SRPQASFPPRADPAKRPMYSRPSASVPTYSQYQTPTPSSYXXXXXXXXXXXXXXLTRQIP 2085
                A F  +    ++P  +    S+P     Q  + S                +  Q P
Sbjct: 242  ----AQFKAQQGNNQKPRLTLGPQSMP-----QGGSSSVVRPQRQFFNNNAGNNIRNQAP 292

Query: 2086 RSPASQRLIQ--------AGPLTCYGCGEAGHMKRNCP---RLXXXXXXXXXXXXRPQGR 2232
            R  A+    Q        + P+ C+ CG++GH    CP   R+              + R
Sbjct: 293  RPVAAPAQHQQFAKREQGSKPVVCFNCGDSGHYADKCPKPRRVKVVPVQSNSVVPVSKAR 352

Query: 2233 VYALTHEEYQPSHEVMEGNLILSNMQVHVLIDTGSSNSFISTRLASMLELDVENTGKILS 2412
            V  +   E Q + +++ G   ++++   VL D+G+++SF+S   A    ++VE+  + L 
Sbjct: 353  VNHVAAAEAQDAPDMILGTFPVNSVPATVLFDSGATHSFLSLSFAGNHGMEVEDLRRPLM 412

Query: 2413 LSTPLGNNTIPKSVCKNCVIRLVDQELSTDLILLELNDFDVILGMDWLVRNHAHVDCYSR 2592
            +STP  N  +      +  I +       +LILLE  D DVILGMDWL R+   +DC ++
Sbjct: 413  VSTP-SNQALSLQRSPSVRIEIQGVPFLANLILLESKDLDVILGMDWLTRHKGVIDCANK 471

Query: 2593 IVTFKIPGRPILKFMGFKNRIEKYLKSKLNNLTTEEKAVPELVEIPVVRDFRSLFPEELP 2772
             VT       ++      +   + L+S+LN +T EE        IP+VR++  +FP++LP
Sbjct: 472  KVTLTSNDGRVVTVQALSS---ESLRSRLNQITLEE--------IPIVREYPDVFPDDLP 520

Query: 2773 GLPPIRAIEFSIDLIPGTAPISITPYRMAPAETRELKSQIDELTHLGFIRPSFSPWGAPV 2952
            G+PP R IEF IDL+PGT PI   PYRMA  E  E+K Q+D+L   G+IRPS SPWGAPV
Sbjct: 521  GMPPKRDIEFRIDLVPGTTPIHKRPYRMAANELAEVKRQVDDLLQKGYIRPSSSPWGAPV 580

Query: 2953 LFVKKKDGSFRLCIDYRRLNQVTIKNKYPLPRIEDLFDQLQGAQYFSKIDLRSGYHQLKI 3132
            +FV+KKD + R+C+DYR LN VTIKNKYPLPRI+DLFDQL+GA  FSKIDLRSGYHQL+I
Sbjct: 581  IFVEKKDHTQRMCVDYRALNDVTIKNKYPLPRIDDLFDQLKGATVFSKIDLRSGYHQLRI 640

Query: 3133 KEDDIPKTAFRTRLGHYEYLVMPFGLTNAPAAFMDLMNRVFWEYLDKFVIVFIDDILIYX 3312
            KE+DIPKTAF TR G +E  VM FGLTNAPA FM+LMN+VF EYLDKFV+VFIDDILIY 
Sbjct: 641  KEEDIPKTAFTTRYGLFECTVMSFGLTNAPAFFMNLMNKVFMEYLDKFVVVFIDDILIYS 700

Query: 3313 XXXXXXXXXLKITLQTLQDHQLYAKFSKCEFWLKEVKFLGHVVSSKGVSVDPSKIEAVTS 3492
                     L++ L+ L++HQLYAKFSKCEFWL EVKFLGHV+S+ GV+VDPS +E+VT+
Sbjct: 701  RTKEEHEEHLRLALEKLREHQLYAKFSKCEFWLSEVKFLGHVISAGGVAVDPSNVESVTN 760

Query: 3493 WKQPTSVAEIRSFLGLAGYYRRFVEGFSMIASPLTRLTQKNVKYEWDDRCEAAFQELKTR 3672
            WKQP +V+EIRSFLGLAGYYRRF+E FS IA P+TRL QK+VKY+W   CE +FQELK+R
Sbjct: 761  WKQPKTVSEIRSFLGLAGYYRRFIENFSKIAKPMTRLLQKDVKYKWSQECEQSFQELKSR 820

Query: 3673 LTTAPVLIAPVPGESLVIYTDASGIGLGCVLMQNGKVIAYASRKLKTHEKNYPAHDLELA 3852
            L +AP+LI P P +   +Y DAS +GLGCVLMQ+GKV+AYASR+L+ HEKNYP HDLELA
Sbjct: 821  LVSAPILILPDPKKGFQVYCDASKLGLGCVLMQDGKVVAYASRQLRPHEKNYPTHDLELA 880

Query: 3853 SIVFSLKIWRHYLYGEKFELFSDHKSLKYIFSQKELNMRQRRWMEYLKDYDFTLHYHPGK 4032
            ++V +LKIWRHYL+G + E+++DHKSLKYIF+Q +LNMRQRRW+E +KDYD  +HYHPGK
Sbjct: 881  AVVHALKIWRHYLFGTRTEVYTDHKSLKYIFTQPDLNMRQRRWLELIKDYDMGIHYHPGK 940

Query: 4033 ANVVADALSRRKESVLAQMMLSEWHMLESVIEFVFDSPKNEDRQHSYLAPLRLHNTLTQR 4212
            ANVVADALSR+         ++E   L   +   F+          ++A L    TL  +
Sbjct: 941  ANVVADALSRK-----GYCNVTEGRQLPMELCKEFERLNLGIISRGFVAALEAKPTLIDQ 995

Query: 4213 IVESQNLDADVVEHCLKAGDSENHEWNIHADGSIRFQNRLWIPTDEQLRKDILGEAHRSR 4392
            + E+Q  D D+ E        +   +     G++    R+ +P ++ L+  IL EAH + 
Sbjct: 996  VREAQINDPDIQEIKKNMRRGKAIGFLEDEQGTVWLGERICVPDNKDLKDAILKEAHDTL 1055

Query: 4393 YSIHPGGTKMYRDLRKHFWWPGMKKHIAQYVNRCMTCQQVKAEHQRPAGLLQPLPVAEWK 4572
            YSIHPG TKMY+DL++ FWW  MK+ IA+YV  C  CQ+VKAEHQ+PAGLLQPL + EWK
Sbjct: 1056 YSIHPGSTKMYQDLKERFWWASMKRKIAEYVAVCDVCQRVKAEHQKPAGLLQPLKIPEWK 1115

Query: 4573 WEHVTMDFVTGLPKASDGLDAIWVIVDRLTKSAHFLPIKMTHTVDRLSRLYIAEIVRLHG 4752
            WE + MDF+TGLP+ S G D+IWVIVDRLTK AHF+P+K T++  RL+ LY+A IV LHG
Sbjct: 1116 WEEIGMDFITGLPRTSSGHDSIWVIVDRLTKVAHFIPVKTTYSGSRLAELYMARIVCLHG 1175

Query: 4753 IPVSIVSDRDPRFTSQFWKSLQSALGTQLKFSTAFHPQTDGQSERVIQILEDMLRACVLD 4932
            +P  IVSDR  +FTS FWK LQ  +G++L FSTA+HPQTDGQ+ERV QILEDMLRAC LD
Sbjct: 1176 VPKKIVSDRGSQFTSNFWKKLQEEMGSKLNFSTAYHPQTDGQTERVNQILEDMLRACALD 1235

Query: 4933 FGGQWKTHLPLVEFSYNNSFQSSIGMAPFEALYGRPCRSPICWTEVGDTILMGPELVEET 5112
            FGG W  +LP  EFSYNNS+Q+S+ MAP+EALYGR CR+P+ W + G+  + G +++ E 
Sbjct: 1236 FGGSWDKNLPYAEFSYNNSYQASLQMAPYEALYGRKCRTPLLWDQTGERQVFGTDILREA 1295

Query: 5113 TEKIRMVQERIKAAQSRQKNYADKRRRPLEFEVGDMVFLKISPKRGISRFGLKGKLKPRY 5292
             EK++++QER++ AQSR K+YAD RRR L FE GD V+L+++P RG+ RF  KGKL PR+
Sbjct: 1296 EEKVKIIQERLRVAQSRHKSYADNRRRDLSFEEGDYVYLRVTPLRGVHRFRTKGKLAPRF 1355

Query: 5293 VGPFEITERVGQVAYRLVLPSQLAQIHNVFHVSMLRKYEPDPSHILDWQSLQLEEDVSYE 5472
            VGP++I  R G+VAY+L LP  LA +HNV HVS L+K    P+   + + ++++ED++Y 
Sbjct: 1356 VGPYKIVSRRGEVAYQLELPQSLAGVHNVSHVSQLKKCLRVPTEEANIEQIEVQEDLTYV 1415

Query: 5473 EGPVQIIGRKEKMLRSRVIPLVKV 5544
            E P++I+   E+  R+RVI   KV
Sbjct: 1416 EKPIRILETSERRTRNRVIRFCKV 1439


>dbj|BAH80069.1| putative retrotransposon protein [Oryza sativa Indica Group]
          Length = 1475

 Score = 1300 bits (3365), Expect = 0.0
 Identities = 671/1402 (47%), Positives = 910/1402 (64%), Gaps = 11/1402 (0%)
 Frame = +1

Query: 1372 LQNFQRLRPPRFGGSSDPAVVEEWVLRTREILITMQCPRDQWVPVAAFQFDGDASHWWRS 1551
            L  F R+RPP F  +++P    +W+    + L  +QC   + V  A+ Q  G AS WW  
Sbjct: 62   LAEFLRVRPPVFSSTTNPVEAGDWLHAIEKKLDLLQCTDQEKVSFASHQLHGPASEWWDH 121

Query: 1552 ER-NVLGDGPVEWADFERMFLDRFISETAREIKQQEFSGMVQGNLTVTDYELRFTRLSRY 1728
             R N     P+ W +F   F    I      +K++EF  + QG+ +VT+Y   F RL+RY
Sbjct: 122  FRLNRTTAEPITWLEFAAAFRKTHIPSGVMSLKKKEFRSLTQGSRSVTEYLHEFNRLARY 181

Query: 1729 ALELIPTDLQKARRFFRGLRPYLRAKMSVIETTNYRDTVSRAQRVEREDMELQTSRRLTS 1908
            A E +  D ++  +F  GL   L   + V +  +++  V +A R E +   ++  +R   
Sbjct: 182  APEDVRNDEERQEKFLGGLNDELSYPLMVGDYPDFQKLVDKAIRQEDKYNFMEQKKRR-- 239

Query: 1909 RPQASFPPRADPAKRPMYSRPSASVPTYSQYQTPTPSSYXXXXXXXXXXXXXXLTRQIPR 2088
               A F  +    ++P  +    S+P         P                 +  Q PR
Sbjct: 240  --MAQFKAQQGSNQKPRLTFGPQSMPHGGSSSVVRPQRQFFNNNVGNN-----IRNQAPR 292

Query: 2089 ---SPASQRLIQ----AGPLTCYGCGEAGHMKRNCP---RLXXXXXXXXXXXXRPQGRVY 2238
               +PA Q+  +    + P+ C+ CG+ GH    CP   R+              + RV 
Sbjct: 293  PVATPAQQQPAKREQGSKPVVCFNCGDPGHYADKCPKPRRVKVVPVQNNSAVPASKARVN 352

Query: 2239 ALTHEEYQPSHEVMEGNLILSNMQVHVLIDTGSSNSFISTRLASMLELDVENTGKILSLS 2418
             +   E Q + +V+ G   ++++   VL D+G+++SF+S   A    ++VE+  + L +S
Sbjct: 353  HVAAAEAQDAPDVILGTFPVNSVPATVLFDSGATHSFLSMSFAGNHGMEVEDLRRPLMVS 412

Query: 2419 TPLGNNTIPKSVCKNCVIRLVDQELSTDLILLELNDFDVILGMDWLVRNHAHVDCYSRIV 2598
            TP  N  +      +  I +       +LILL+  D DVILGMDWL R+   +DC +R V
Sbjct: 413  TP-SNQALSLQRSPSVRIEIQGVPFLANLILLKSKDLDVILGMDWLARHKGVIDCANRKV 471

Query: 2599 TFKIPGRPILKFMGFKNRIEKYLKSKLNNLTTEEKAVPELVEIPVVRDFRSLFPEELPGL 2778
            T       ++          + L+S+LN +T EE        IP+VR++  +FP++LPG+
Sbjct: 472  TLTSNDGQVVTVHALST---ESLRSRLNQITLEE--------IPIVREYPDVFPDDLPGM 520

Query: 2779 PPIRAIEFSIDLIPGTAPISITPYRMAPAETRELKSQIDELTHLGFIRPSFSPWGAPVLF 2958
            PP R IEF IDL+PGT PI   PYRMA  E  E+K Q+D+L   G+IRPS SPWGAPV+F
Sbjct: 521  PPKRDIEFRIDLVPGTTPIHKRPYRMAANELAEVKRQVDDLLQKGYIRPSSSPWGAPVIF 580

Query: 2959 VKKKDGSFRLCIDYRRLNQVTIKNKYPLPRIEDLFDQLQGAQYFSKIDLRSGYHQLKIKE 3138
            V+KKD + R+C+DYR LN VTIKNKYPLPRI+DLFDQL+GA  FSKIDLRSGYHQL+IKE
Sbjct: 581  VEKKDHTQRMCVDYRALNDVTIKNKYPLPRIDDLFDQLKGATVFSKIDLRSGYHQLRIKE 640

Query: 3139 DDIPKTAFRTRLGHYEYLVMPFGLTNAPAAFMDLMNRVFWEYLDKFVIVFIDDILIYXXX 3318
            +DIPKTAF TR G +E  VM FGLTNAPA FM+LMN+VF EYLDKFV+VFIDDILIY   
Sbjct: 641  EDIPKTAFTTRYGLFECTVMSFGLTNAPAFFMNLMNKVFMEYLDKFVVVFIDDILIYSRT 700

Query: 3319 XXXXXXXLKITLQTLQDHQLYAKFSKCEFWLKEVKFLGHVVSSKGVSVDPSKIEAVTSWK 3498
                   L++ L+ L++HQLYAKFSKCEFWL EVKFLGHV+S+ GV+VDPS +E+VT+WK
Sbjct: 701  KEEHEEHLRLALEKLREHQLYAKFSKCEFWLSEVKFLGHVISAGGVAVDPSNVESVTNWK 760

Query: 3499 QPTSVAEIRSFLGLAGYYRRFVEGFSMIASPLTRLTQKNVKYEWDDRCEAAFQELKTRLT 3678
            QP +V+EIRSFLGLAGYYRRF+E FS IA P+TRL QK+VKY+W + CE +FQELK RL 
Sbjct: 761  QPKTVSEIRSFLGLAGYYRRFIENFSKIAKPMTRLLQKDVKYKWSEECEQSFQELKNRLV 820

Query: 3679 TAPVLIAPVPGESLVIYTDASGIGLGCVLMQNGKVIAYASRKLKTHEKNYPAHDLELASI 3858
            +AP+LI P P +   +Y DAS +GLGCVLMQ+GKV+AYASR+L+ HEKNYP HDLELA++
Sbjct: 821  SAPILILPDPKKGFQVYCDASKLGLGCVLMQDGKVVAYASRQLRPHEKNYPTHDLELAAV 880

Query: 3859 VFSLKIWRHYLYGEKFELFSDHKSLKYIFSQKELNMRQRRWMEYLKDYDFTLHYHPGKAN 4038
            V +LKIWRHYL+G + E+++DHKSLKYIF+Q +LNMRQRRW+E +KDYD  +HYHPGKAN
Sbjct: 881  VHALKIWRHYLFGTRTEVYTDHKSLKYIFTQPDLNMRQRRWLELIKDYDMGIHYHPGKAN 940

Query: 4039 VVADALSRRKESVLAQMMLSEWHMLESVIEFVFDSPKNEDRQHSYLAPLRLHNTLTQRIV 4218
            VVADALSR+          +E   L   +   F+          ++A L    TL  ++ 
Sbjct: 941  VVADALSRK-----GYCNATEGRQLPLELCKEFERLNLGIVSRGFVAALEAKPTLIDQVR 995

Query: 4219 ESQNLDADVVEHCLKAGDSENHEWNIHADGSIRFQNRLWIPTDEQLRKDILGEAHRSRYS 4398
            E+Q  D D+ E        +   +     G++    R+ +P ++ L+  IL EAH + YS
Sbjct: 996  EAQINDPDIQEIKKNMRRGKAIGFLEDEQGTVWLGERICVPDNKDLKDAILKEAHDTLYS 1055

Query: 4399 IHPGGTKMYRDLRKHFWWPGMKKHIAQYVNRCMTCQQVKAEHQRPAGLLQPLPVAEWKWE 4578
            IHPG TKMY+DL++ FWW  MK+ IA+YV  C  CQ+VKAEHQ+PAGLLQPL + EWKWE
Sbjct: 1056 IHPGSTKMYQDLKERFWWASMKREIAEYVAVCDVCQRVKAEHQKPAGLLQPLKIPEWKWE 1115

Query: 4579 HVTMDFVTGLPKASDGLDAIWVIVDRLTKSAHFLPIKMTHTVDRLSRLYIAEIVRLHGIP 4758
             + MDF+TGLP+ S G D+IWVIVDRLTK AHF+P+K T++  RL+ LY+A IV LHG+P
Sbjct: 1116 EIGMDFITGLPRTSSGHDSIWVIVDRLTKVAHFIPVKTTYSGSRLAELYMARIVCLHGVP 1175

Query: 4759 VSIVSDRDPRFTSQFWKSLQSALGTQLKFSTAFHPQTDGQSERVIQILEDMLRACVLDFG 4938
              IVSDR  +FTS FWK LQ  +G++L FSTA+HPQTDGQ+ERV QILEDMLRAC LDFG
Sbjct: 1176 KKIVSDRGSQFTSNFWKKLQEEMGSKLNFSTAYHPQTDGQTERVNQILEDMLRACALDFG 1235

Query: 4939 GQWKTHLPLVEFSYNNSFQSSIGMAPFEALYGRPCRSPICWTEVGDTILMGPELVEETTE 5118
            G W  +LP  EFSYNNS+Q+S+ MAP+EALYGR CR+P+ W + G+  + G +++    E
Sbjct: 1236 GSWDKNLPYAEFSYNNSYQASLQMAPYEALYGRKCRTPLLWDQTGERQVFGTDILRGAEE 1295

Query: 5119 KIRMVQERIKAAQSRQKNYADKRRRPLEFEVGDMVFLKISPKRGISRFGLKGKLKPRYVG 5298
            K++++QER++ AQSR K+YAD RRR L FE GD V+L+++P RG+ RF  KGKL PR+VG
Sbjct: 1296 KVKIIQERLRVAQSRHKSYADNRRRDLSFEEGDYVYLRVTPLRGVHRFHTKGKLAPRFVG 1355

Query: 5299 PFEITERVGQVAYRLVLPSQLAQIHNVFHVSMLRKYEPDPSHILDWQSLQLEEDVSYEEG 5478
            P++I  R G+VAY+L LP  LA +H+VFHVS L+K    P+   + + ++++ED++Y E 
Sbjct: 1356 PYKIVSRRGEVAYQLELPQSLAGVHDVFHVSQLKKCLRVPTEEANIEQIEVQEDLTYVEK 1415

Query: 5479 PVQIIGRKEKMLRSRVIPLVKV 5544
            P++I+   E+  R+RVI   KV
Sbjct: 1416 PIRILETSERRTRNRVIRFCKV 1437


>gb|ABB46774.2| retrotransposon protein, putative, Ty3-gypsy subclass [Oryza sativa
            Japonica Group]
          Length = 1695

 Score = 1300 bits (3365), Expect = 0.0
 Identities = 670/1404 (47%), Positives = 912/1404 (64%), Gaps = 13/1404 (0%)
 Frame = +1

Query: 1372 LQNFQRLRPPRFGGSSDPAVVEEWVLRTREILITMQCPRDQWVPVAAFQFDGDASHWWRS 1551
            L  F R+RPP F  +++P    +W+    + L  +QC   + V  A+ Q  G AS WW  
Sbjct: 282  LAEFLRVRPPVFSSTTNPVEAGDWLHAIEKKLDLLQCTDQEKVSFASHQLHGPASEWWDH 341

Query: 1552 ER-NVLGDGPVEWADFERMFLDRFISETAREIKQQEFSGMVQGNLTVTDYELRFTRLSRY 1728
             R N     P+ W +F   F    I      +K++EF  + QG+ +VT+Y   F RL+RY
Sbjct: 342  FRLNRTTAEPITWLEFTAAFRKTHIPSGVVSLKKKEFRSLTQGSRSVTEYLHEFNRLARY 401

Query: 1729 ALELIPTDLQKARRFFRGLRPYLRAKMSVIETTNYRDTVSRAQRVEREDMELQTSRRLTS 1908
            A E +  D ++  +F  GL   L   +   + ++++  V +A   E +   ++  +R   
Sbjct: 402  APEDVRNDEERQEKFLEGLNDELSYPLMTEDYSDFQKLVDKAIHQEDKYNRMEQKKRRI- 460

Query: 1909 RPQASFPPRADPAKRPMYSRPSASVPTYSQYQTPTPSSYXXXXXXXXXXXXXXLTRQIPR 2088
               A F  +    ++P  +    S+P         P                 +  Q PR
Sbjct: 461  ---AHFKAQQGNNQKPRLTLGPQSMPHGGSSSVVRPQHQFFNNNAGNN-----IRNQAPR 512

Query: 2089 SPASQRLIQAG-------PLTCYGCGEAGHMKRNCPR---LXXXXXXXXXXXXRPQGRVY 2238
              A+    Q         P+ C+ CG+ GH    CP+   +              + RV 
Sbjct: 513  PVAASTQQQPAKREQGSKPVVCFNCGDPGHYADKCPKPRHVKVVPAQSNSAVPASKARVN 572

Query: 2239 ALTHEEYQPSHEVMEGNLILSNMQVHVLIDTGSSNSFISTRLASMLELDVENTGKILSLS 2418
             +   E Q + +V+ G  +++++   VL D+G+++SF+S   A    ++VE+    L +S
Sbjct: 573  HVAAAEAQDAPDVILGTFLVNSVPATVLFDSGATHSFLSMSFAGNHGMEVEDLRCPLMVS 632

Query: 2419 TPLGNNTIPKSVCKNCVIRLVDQELSTDLILLELNDFDVILGMDWLVRNHAHVDCYSRIV 2598
            TP  N  +      +  I +       +LILLE  D DVILGMDWL R+   +DC +R V
Sbjct: 633  TP-SNQALSLQRSPSVRIEIQGVPFLANLILLESKDLDVILGMDWLARHKGVIDCANRKV 691

Query: 2599 TFKIPGRPILKFMGFKNRIEKYLKSKLNNLTTEEKAVPELVEIPVVRDFRSLFPEELPGL 2778
            T       ++      +   ++L+S+LN +T EE        IP+VR +  +FP++LPG+
Sbjct: 692  TLTSNDGRVVTVHALSS---EFLRSRLNQITLEE--------IPIVRGYPDVFPDDLPGM 740

Query: 2779 PPIRAIEFSIDLIPGTAPISITPYRMAPAETRELKSQIDELTHLGFIRPSFSPWGAPVLF 2958
            PP R IEF  DL+PGT PI   PYRMA  E  E+K Q+D+L   G+IRPS SPWGAPV+F
Sbjct: 741  PPKRDIEFRKDLVPGTTPIHKRPYRMAANELAEVKRQVDDLLQKGYIRPSSSPWGAPVIF 800

Query: 2959 VKKKDGSFRLCIDYRRLNQVTIKNKYPLPRIEDLFDQLQGAQYFSKIDLRSGYHQLKIKE 3138
            V+KKD + R+C+DYR LN VTIKNKYPLPRI+DLFDQL+GA  FSKIDLRSGYHQL+IKE
Sbjct: 801  VEKKDHTQRMCVDYRALNDVTIKNKYPLPRIDDLFDQLKGATVFSKIDLRSGYHQLRIKE 860

Query: 3139 DDIPKTAFRTRLGHYEYLVMPFGLTNAPAAFMDLMNRVFWEYLDKFVIVFIDDILIYXXX 3318
            +DIPKTAF TR G +E  VM FGLTNAPA FM+LMN+VF EYLDKFV+VFIDDILIY   
Sbjct: 861  EDIPKTAFTTRYGLFECTVMSFGLTNAPAFFMNLMNKVFMEYLDKFVVVFIDDILIYSKT 920

Query: 3319 XXXXXXXLKITLQTLQDHQLYAKFSKCEFWLKEVKFLGHVVSSKGVSVDPSKIEAVTSWK 3498
                   L++ L+ L++HQLYAKFSKCEFWL EVKFLGHV+S+ GV+VDPS +E+VT+WK
Sbjct: 921  KEEHEEHLRLALEKLREHQLYAKFSKCEFWLSEVKFLGHVISAGGVAVDPSNVESVTNWK 980

Query: 3499 QPTSVAEIRSFLGLAGYYRRFVEGFSMIASPLTRLTQKNVKYEWDDRCEAAFQELKTRLT 3678
            QP +V+EIRSFLGLAGYYR+F+E FS IA P+TRL QK+VKY+W + CE +FQELK RL 
Sbjct: 981  QPKTVSEIRSFLGLAGYYRKFIENFSKIAKPMTRLFQKDVKYKWSEECEQSFQELKNRLI 1040

Query: 3679 TAPVLIAPVPGESLVIYTDASGIGLGCVLMQNGKVIAYASRKLKTHEKNYPAHDLELASI 3858
            +AP+LI P P +   +Y DAS +GLGCVLMQ+GKV+AYASR+L+ HEKNYP HDLELA++
Sbjct: 1041 SAPILILPDPKKGFQVYCDASKLGLGCVLMQDGKVVAYASRQLRPHEKNYPTHDLELAAV 1100

Query: 3859 VFSLKIWRHYLYGEKFELFSDHKSLKYIFSQKELNMRQRRWMEYLKDYDFTLHYHPGKAN 4038
            V +LKIWRHYL+G + E+++DHKSLKYIF+Q +LNMRQRRW+E +KDYD  +HYHPGKAN
Sbjct: 1101 VHALKIWRHYLFGTRTEVYTDHKSLKYIFTQPDLNMRQRRWLELIKDYDMGIHYHPGKAN 1160

Query: 4039 VVADALSRRKESVLAQMMLSEWHMLESVIEFVFDSPKNEDRQHSYLAPLRLHNTLTQRIV 4218
            VVADALSR+          +E   L   +   F+          ++A L    TL  ++ 
Sbjct: 1161 VVADALSRK-----GYCNATEGRQLPLELCKEFERLNLGIVSIGFVAALEAKPTLIDQVR 1215

Query: 4219 ESQNLDADV--VEHCLKAGDSENHEWNIHADGSIRFQNRLWIPTDEQLRKDILGEAHRSR 4392
            E+Q  D D+  ++  ++ G +     + H  G++    R+ +P ++ L+  IL EAH + 
Sbjct: 1216 EAQTNDPDIQEIKKNMRRGKAIGFLEDEH--GTVWLGERICVPDNKDLKDAILKEAHDTL 1273

Query: 4393 YSIHPGGTKMYRDLRKHFWWPGMKKHIAQYVNRCMTCQQVKAEHQRPAGLLQPLPVAEWK 4572
            YSIHPG TKMY+DL++ FWW  MK+ IA+YV  C  CQ+VKAEHQ+PAGLLQPL + EWK
Sbjct: 1274 YSIHPGSTKMYQDLKERFWWASMKREIAEYVAVCDVCQRVKAEHQKPAGLLQPLKIPEWK 1333

Query: 4573 WEHVTMDFVTGLPKASDGLDAIWVIVDRLTKSAHFLPIKMTHTVDRLSRLYIAEIVRLHG 4752
            WE + MDF+TGLPK S G D+IWVIVDRLTK AHF+P+K T++  RL+ LY+A IV LHG
Sbjct: 1334 WEEIGMDFITGLPKTSLGHDSIWVIVDRLTKVAHFIPVKTTYSGSRLAELYMARIVCLHG 1393

Query: 4753 IPVSIVSDRDPRFTSQFWKSLQSALGTQLKFSTAFHPQTDGQSERVIQILEDMLRACVLD 4932
            +P  IVSDR  +FTS FWK LQ  +G++L FSTA+HPQTDGQ+ERV QILEDMLRAC LD
Sbjct: 1394 VPKKIVSDRGSQFTSNFWKKLQEEMGSKLNFSTAYHPQTDGQTERVNQILEDMLRACALD 1453

Query: 4933 FGGQWKTHLPLVEFSYNNSFQSSIGMAPFEALYGRPCRSPICWTEVGDTILMGPELVEET 5112
            FGG W  +LP  EFSYNNS+Q+S+ MAP+EALYGR CR+P+ W + G+  + G +++ E 
Sbjct: 1454 FGGSWDKNLPYAEFSYNNSYQASLQMAPYEALYGRKCRTPLLWDQTGERQVFGTDILREA 1513

Query: 5113 TEKIRMVQERIKAAQSRQKNYADKRRRPLEFEVGDMVFLKISPKRGISRFGLKGKLKPRY 5292
             EK++++QER++ AQSR K+YAD RRR L FE GD V+L+++P RG+ RF  KGKL PR+
Sbjct: 1514 EEKVKIIQERLRVAQSRHKSYADNRRRDLSFEEGDYVYLRVTPLRGVHRFHTKGKLVPRF 1573

Query: 5293 VGPFEITERVGQVAYRLVLPSQLAQIHNVFHVSMLRKYEPDPSHILDWQSLQLEEDVSYE 5472
            VGP++I  R G+VAY+L LP  LA++HNVFHVS L+K    P+   + + ++++ED++Y 
Sbjct: 1574 VGPYKIVSRRGEVAYQLELPQSLAEVHNVFHVSQLKKCLRVPTEEANLEQIEVQEDLTYV 1633

Query: 5473 EGPVQIIGRKEKMLRSRVIPLVKV 5544
            E P++I+   E+  R+RVI   KV
Sbjct: 1634 EKPIRILETNERRTRNRVIRFCKV 1657


>gb|AAM14695.1|AC097446_24 Putative polyprotein [Oryza sativa Japonica Group]
          Length = 1680

 Score = 1300 bits (3365), Expect = 0.0
 Identities = 670/1404 (47%), Positives = 912/1404 (64%), Gaps = 13/1404 (0%)
 Frame = +1

Query: 1372 LQNFQRLRPPRFGGSSDPAVVEEWVLRTREILITMQCPRDQWVPVAAFQFDGDASHWWRS 1551
            L  F R+RPP F  +++P    +W+    + L  +QC   + V  A+ Q  G AS WW  
Sbjct: 267  LAEFLRVRPPVFSSTTNPVEAGDWLHAIEKKLDLLQCTDQEKVSFASHQLHGPASEWWDH 326

Query: 1552 ER-NVLGDGPVEWADFERMFLDRFISETAREIKQQEFSGMVQGNLTVTDYELRFTRLSRY 1728
             R N     P+ W +F   F    I      +K++EF  + QG+ +VT+Y   F RL+RY
Sbjct: 327  FRLNRTTAEPITWLEFTAAFRKTHIPSGVVSLKKKEFRSLTQGSRSVTEYLHEFNRLARY 386

Query: 1729 ALELIPTDLQKARRFFRGLRPYLRAKMSVIETTNYRDTVSRAQRVEREDMELQTSRRLTS 1908
            A E +  D ++  +F  GL   L   +   + ++++  V +A   E +   ++  +R   
Sbjct: 387  APEDVRNDEERQEKFLEGLNDELSYPLMTEDYSDFQKLVDKAIHQEDKYNRMEQKKRRI- 445

Query: 1909 RPQASFPPRADPAKRPMYSRPSASVPTYSQYQTPTPSSYXXXXXXXXXXXXXXLTRQIPR 2088
               A F  +    ++P  +    S+P         P                 +  Q PR
Sbjct: 446  ---AHFKAQQGNNQKPRLTLGPQSMPHGGSSSVVRPQHQFFNNNAGNN-----IRNQAPR 497

Query: 2089 SPASQRLIQAG-------PLTCYGCGEAGHMKRNCPR---LXXXXXXXXXXXXRPQGRVY 2238
              A+    Q         P+ C+ CG+ GH    CP+   +              + RV 
Sbjct: 498  PVAASTQQQPAKREQGSKPVVCFNCGDPGHYADKCPKPRHVKVVPAQSNSAVPASKARVN 557

Query: 2239 ALTHEEYQPSHEVMEGNLILSNMQVHVLIDTGSSNSFISTRLASMLELDVENTGKILSLS 2418
             +   E Q + +V+ G  +++++   VL D+G+++SF+S   A    ++VE+    L +S
Sbjct: 558  HVAAAEAQDAPDVILGTFLVNSVPATVLFDSGATHSFLSMSFAGNHGMEVEDLRCPLMVS 617

Query: 2419 TPLGNNTIPKSVCKNCVIRLVDQELSTDLILLELNDFDVILGMDWLVRNHAHVDCYSRIV 2598
            TP  N  +      +  I +       +LILLE  D DVILGMDWL R+   +DC +R V
Sbjct: 618  TP-SNQALSLQRSPSVRIEIQGVPFLANLILLESKDLDVILGMDWLARHKGVIDCANRKV 676

Query: 2599 TFKIPGRPILKFMGFKNRIEKYLKSKLNNLTTEEKAVPELVEIPVVRDFRSLFPEELPGL 2778
            T       ++      +   ++L+S+LN +T EE        IP+VR +  +FP++LPG+
Sbjct: 677  TLTSNDGRVVTVHALSS---EFLRSRLNQITLEE--------IPIVRGYPDVFPDDLPGM 725

Query: 2779 PPIRAIEFSIDLIPGTAPISITPYRMAPAETRELKSQIDELTHLGFIRPSFSPWGAPVLF 2958
            PP R IEF  DL+PGT PI   PYRMA  E  E+K Q+D+L   G+IRPS SPWGAPV+F
Sbjct: 726  PPKRDIEFRKDLVPGTTPIHKRPYRMAANELAEVKRQVDDLLQKGYIRPSSSPWGAPVIF 785

Query: 2959 VKKKDGSFRLCIDYRRLNQVTIKNKYPLPRIEDLFDQLQGAQYFSKIDLRSGYHQLKIKE 3138
            V+KKD + R+C+DYR LN VTIKNKYPLPRI+DLFDQL+GA  FSKIDLRSGYHQL+IKE
Sbjct: 786  VEKKDHTQRMCVDYRALNDVTIKNKYPLPRIDDLFDQLKGATVFSKIDLRSGYHQLRIKE 845

Query: 3139 DDIPKTAFRTRLGHYEYLVMPFGLTNAPAAFMDLMNRVFWEYLDKFVIVFIDDILIYXXX 3318
            +DIPKTAF TR G +E  VM FGLTNAPA FM+LMN+VF EYLDKFV+VFIDDILIY   
Sbjct: 846  EDIPKTAFTTRYGLFECTVMSFGLTNAPAFFMNLMNKVFMEYLDKFVVVFIDDILIYSKT 905

Query: 3319 XXXXXXXLKITLQTLQDHQLYAKFSKCEFWLKEVKFLGHVVSSKGVSVDPSKIEAVTSWK 3498
                   L++ L+ L++HQLYAKFSKCEFWL EVKFLGHV+S+ GV+VDPS +E+VT+WK
Sbjct: 906  KEEHEEHLRLALEKLREHQLYAKFSKCEFWLSEVKFLGHVISAGGVAVDPSNVESVTNWK 965

Query: 3499 QPTSVAEIRSFLGLAGYYRRFVEGFSMIASPLTRLTQKNVKYEWDDRCEAAFQELKTRLT 3678
            QP +V+EIRSFLGLAGYYR+F+E FS IA P+TRL QK+VKY+W + CE +FQELK RL 
Sbjct: 966  QPKTVSEIRSFLGLAGYYRKFIENFSKIAKPMTRLFQKDVKYKWSEECEQSFQELKNRLI 1025

Query: 3679 TAPVLIAPVPGESLVIYTDASGIGLGCVLMQNGKVIAYASRKLKTHEKNYPAHDLELASI 3858
            +AP+LI P P +   +Y DAS +GLGCVLMQ+GKV+AYASR+L+ HEKNYP HDLELA++
Sbjct: 1026 SAPILILPDPKKGFQVYCDASKLGLGCVLMQDGKVVAYASRQLRPHEKNYPTHDLELAAV 1085

Query: 3859 VFSLKIWRHYLYGEKFELFSDHKSLKYIFSQKELNMRQRRWMEYLKDYDFTLHYHPGKAN 4038
            V +LKIWRHYL+G + E+++DHKSLKYIF+Q +LNMRQRRW+E +KDYD  +HYHPGKAN
Sbjct: 1086 VHALKIWRHYLFGTRTEVYTDHKSLKYIFTQPDLNMRQRRWLELIKDYDMGIHYHPGKAN 1145

Query: 4039 VVADALSRRKESVLAQMMLSEWHMLESVIEFVFDSPKNEDRQHSYLAPLRLHNTLTQRIV 4218
            VVADALSR+          +E   L   +   F+          ++A L    TL  ++ 
Sbjct: 1146 VVADALSRK-----GYCNATEGRQLPLELCKEFERLNLGIVSIGFVAALEAKPTLIDQVR 1200

Query: 4219 ESQNLDADV--VEHCLKAGDSENHEWNIHADGSIRFQNRLWIPTDEQLRKDILGEAHRSR 4392
            E+Q  D D+  ++  ++ G +     + H  G++    R+ +P ++ L+  IL EAH + 
Sbjct: 1201 EAQTNDPDIQEIKKNMRRGKAIGFLEDEH--GTVWLGERICVPDNKDLKDAILKEAHDTL 1258

Query: 4393 YSIHPGGTKMYRDLRKHFWWPGMKKHIAQYVNRCMTCQQVKAEHQRPAGLLQPLPVAEWK 4572
            YSIHPG TKMY+DL++ FWW  MK+ IA+YV  C  CQ+VKAEHQ+PAGLLQPL + EWK
Sbjct: 1259 YSIHPGSTKMYQDLKERFWWASMKREIAEYVAVCDVCQRVKAEHQKPAGLLQPLKIPEWK 1318

Query: 4573 WEHVTMDFVTGLPKASDGLDAIWVIVDRLTKSAHFLPIKMTHTVDRLSRLYIAEIVRLHG 4752
            WE + MDF+TGLPK S G D+IWVIVDRLTK AHF+P+K T++  RL+ LY+A IV LHG
Sbjct: 1319 WEEIGMDFITGLPKTSLGHDSIWVIVDRLTKVAHFIPVKTTYSGSRLAELYMARIVCLHG 1378

Query: 4753 IPVSIVSDRDPRFTSQFWKSLQSALGTQLKFSTAFHPQTDGQSERVIQILEDMLRACVLD 4932
            +P  IVSDR  +FTS FWK LQ  +G++L FSTA+HPQTDGQ+ERV QILEDMLRAC LD
Sbjct: 1379 VPKKIVSDRGSQFTSNFWKKLQEEMGSKLNFSTAYHPQTDGQTERVNQILEDMLRACALD 1438

Query: 4933 FGGQWKTHLPLVEFSYNNSFQSSIGMAPFEALYGRPCRSPICWTEVGDTILMGPELVEET 5112
            FGG W  +LP  EFSYNNS+Q+S+ MAP+EALYGR CR+P+ W + G+  + G +++ E 
Sbjct: 1439 FGGSWDKNLPYAEFSYNNSYQASLQMAPYEALYGRKCRTPLLWDQTGERQVFGTDILREA 1498

Query: 5113 TEKIRMVQERIKAAQSRQKNYADKRRRPLEFEVGDMVFLKISPKRGISRFGLKGKLKPRY 5292
             EK++++QER++ AQSR K+YAD RRR L FE GD V+L+++P RG+ RF  KGKL PR+
Sbjct: 1499 EEKVKIIQERLRVAQSRHKSYADNRRRDLSFEEGDYVYLRVTPLRGVHRFHTKGKLVPRF 1558

Query: 5293 VGPFEITERVGQVAYRLVLPSQLAQIHNVFHVSMLRKYEPDPSHILDWQSLQLEEDVSYE 5472
            VGP++I  R G+VAY+L LP  LA++HNVFHVS L+K    P+   + + ++++ED++Y 
Sbjct: 1559 VGPYKIVSRRGEVAYQLELPQSLAEVHNVFHVSQLKKCLRVPTEEANLEQIEVQEDLTYV 1618

Query: 5473 EGPVQIIGRKEKMLRSRVIPLVKV 5544
            E P++I+   E+  R+RVI   KV
Sbjct: 1619 EKPIRILETNERRTRNRVIRFCKV 1642