BLASTX nr result
ID: Akebia27_contig00002768
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Akebia27_contig00002768 (5732 letters) Database: ./nr 38,876,450 sequences; 13,856,398,315 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value emb|CAN66189.1| hypothetical protein VITISV_006047 [Vitis vinifera] 1444 0.0 ref|XP_007200265.1| hypothetical protein PRUPE_ppa015000mg [Prun... 1418 0.0 emb|CAH65904.1| H0207B04.5 [Oryza sativa Indica Group] 1313 0.0 dbj|BAH80025.1| putative retrotransposon protein [Oryza sativa I... 1310 0.0 gb|ABA97812.1| retrotransposon protein, putative, Ty3-gypsy subc... 1309 0.0 emb|CAH66120.1| OSIGBa0146N20.5 [Oryza sativa Indica Group] 1309 0.0 gb|ABA98266.1| retrotransposon protein, putative, Ty3-gypsy subc... 1306 0.0 gb|AAL78097.1|AC093568_7 Putative polyprotein [Oryza sativa] gi|... 1306 0.0 emb|CAD40208.2| OSJNBa0019J05.6 [Oryza sativa Japonica Group] 1305 0.0 emb|CAH66289.1| OSIGBa0161P06.6 [Oryza sativa Indica Group] 1303 0.0 gb|AAS98511.1| putative polyprotein [Oryza sativa Japonica Group] 1303 0.0 gb|ABA92233.1| retrotransposon protein, putative, Ty3-gypsy subc... 1303 0.0 emb|CAE04932.2| OSJNBa0017P10.9 [Oryza sativa Japonica Group] 1302 0.0 gb|ABA97771.1| retrotransposon protein, putative, Ty3-gypsy subc... 1302 0.0 emb|CAE04776.3| OSJNBb0115I21.3 [Oryza sativa Japonica Group] 1301 0.0 gb|ABA95022.1| retrotransposon protein, putative, Ty3-gypsy subc... 1301 0.0 dbj|BAH79971.1| hypothetical protein [Oryza sativa Indica Group] 1301 0.0 dbj|BAH80069.1| putative retrotransposon protein [Oryza sativa I... 1300 0.0 gb|ABB46774.2| retrotransposon protein, putative, Ty3-gypsy subc... 1300 0.0 gb|AAM14695.1|AC097446_24 Putative polyprotein [Oryza sativa Jap... 1300 0.0 >emb|CAN66189.1| hypothetical protein VITISV_006047 [Vitis vinifera] Length = 1573 Score = 1444 bits (3737), Expect = 0.0 Identities = 743/1418 (52%), Positives = 966/1418 (68%), Gaps = 44/1418 (3%) Frame = +1 Query: 1372 LQNFQRLRPPRFGGSSDPAVVEEWVLRTREILITMQCPRDQWVPVAAFQFDGDASHWWRS 1551 ++ F ++PP F G E W+ R R IL+ + P ++ V +A + A WW S Sbjct: 207 MKRFMVMQPPSFNGEPSAEASEHWLRRMRRILVGLDIPEERRVGLATYMLVDKADFWWES 266 Query: 1552 ERNVLGDGPVEWADFERMFLDRFISETAREIKQQEFSGMVQGNLTVTDYELRFTRLSRYA 1731 + V + W +FER+FL ++ E A+ K+ EF ++QG + V +YE RF+ LSR+A Sbjct: 267 MKRVYDTEVMTWEEFERIFLGKYFGEVAKHAKRMEFEHLIQGTMLVLEYESRFSELSRFA 326 Query: 1732 LELIPTDLQKARRFFRGLRPYLRAKMSVIETTNYRDTVSRAQRVEREDMELQTSRRLTSR 1911 L +I + +KARRF +GLRP +R ++ + +Y + V RA VE++ E R Sbjct: 327 LGMISEEGEKARRFQQGLRPIIRNRLVPLAIRDYSELVKRALLVEQDIDETNQIREQKGD 386 Query: 1912 PQASFPPRADPAKRPMYSRPSASVPTYSQYQTPTPSSYXXXXXXXXXXXXXXLTRQIPRS 2091 + +R S +Q PS Y QI + Sbjct: 387 KKGK--------QRMGESSQGPQQRQRTQQFERRPSFYAGEG-------------QIAQR 425 Query: 2092 PASQRLIQAGPLTCYGCGEAGHMKRNCP-------------------------------- 2175 A+ R+ CYGCG H+ R CP Sbjct: 426 AATNRV-------CYGCGAGDHLWRACPLRGAQXAQPQSQGSSQQQPMPQLPPAAQGTRT 478 Query: 2176 -----RLXXXXXXXXXXXXRPQ-GRVYALTHEEYQPSHEVMEGNLILSNMQVHVLIDTGS 2337 + RP GRV+ALT E ++EG +++ + V VL DTG+ Sbjct: 479 TTMNSQTRSSQGSNARGRGRPAAGRVFALTPTEPDKDALLVEGMILVYSTWVRVLFDTGA 538 Query: 2338 SNSFISTRLASMLELDVENTGKILSLSTPLGNNTIPKSVCKNCVIRLVDQELSTDLILLE 2517 ++SFIS A+ L L E +L + +P+G N+ +CK CVI L D+ L+ DL +L+ Sbjct: 539 THSFISASCANALGLKSERVENLLLIESPMGTNSRVDRICKGCVITLADRALNVDLRILD 598 Query: 2518 LNDFDVILGMDWLVRNHAHVDCYSRIVTFKIP----GRPILKFMGFKNRIEKYLKSKLNN 2685 + +DVILGMDWL A +DC+ R + F +P P +++ K I + L Sbjct: 599 MTGYDVILGMDWLAVYRAVIDCHRRRIIFCLPEGFESDPCYRYVLRKGSI-----NFLAC 653 Query: 2686 LTTEEKAVPELVEIPVVRDFRSLFPEELPGLPPIRAIEFSIDLIPGTAPISITPYRMAPA 2865 L +EKA ++ EIPVVR F+ +FP+ELPGLPP R +FSI++ PGT PIS++PYRMAP Sbjct: 654 LRGKEKAQKDITEIPVVRKFQDVFPDELPGLPPHREFDFSIEVYPGTDPISVSPYRMAPL 713 Query: 2866 ETRELKSQIDELTHLGFIRPSFSPWGAPVLFVKKKDGSFRLCIDYRRLNQVTIKNKYPLP 3045 E +ELK+Q+DEL GFIRPS SPWGAPVLFVKKKD + RLCI+YR+LN+VT+KNKYPLP Sbjct: 714 ELKELKTQLDELLGKGFIRPSTSPWGAPVLFVKKKDDTLRLCIEYRKLNRVTVKNKYPLP 773 Query: 3046 RIEDLFDQLQGAQYFSKIDLRSGYHQLKIKEDDIPKTAFRTRLGHYEYLVMPFGLTNAPA 3225 RI+DL R+GYHQL+++EDD+ KTAFRTR G+YE+LVMPFGLTNAPA Sbjct: 774 RIDDL---------------RTGYHQLRVREDDVSKTAFRTRYGNYEFLVMPFGLTNAPA 818 Query: 3226 AFMDLMNRVFWEYLDKFVIVFIDDILIYXXXXXXXXXXLKITLQTLQDHQLYAKFSKCEF 3405 AFMDLMNRVF YLD+FVIVF+DDILIY L TL TL+ HQLY K K EF Sbjct: 819 AFMDLMNRVFRAYLDRFVIVFVDDILIYSRSLEEHKQHLVTTLGTLRRHQLYGKLDKSEF 878 Query: 3406 WLKEVKFLGHVVSSKGVSVDPSKIEAVTSWKQPTSVAEIRSFLGLAGYYRRFVEGFSMIA 3585 WL EV FLGHVVS G++VD SK+EA+ W++PT+V E+RSFLGLAGYYRRFVE FS IA Sbjct: 879 WLTEVNFLGHVVSEAGIAVDHSKVEAIQEWQRPTNVFEVRSFLGLAGYYRRFVEDFSRIA 938 Query: 3586 SPLTRLTQKNVKYEWDDRCEAAFQELKTRLTTAPVLIAPVPGESLVIYTDASGIGLGCVL 3765 +P+T+LT+K VK++W++ CE AFQELK +LTTAPVL AP+ GE +IY DAS +GLGCVL Sbjct: 939 APMTQLTRKWVKFDWNEECENAFQELKQKLTTAPVLTAPISGELFMIYCDASTVGLGCVL 998 Query: 3766 MQNGKVIAYASRKLKTHEKNYPAHDLELASIVFSLKIWRHYLYGEKFELFSDHKSLKYIF 3945 MQ GKV+AYASR+LK HE+NY AHDLELA++VF+LK W HYLYGEKFE++SDHKSLKYIF Sbjct: 999 MQQGKVVAYASRQLKQHERNYLAHDLELAAMVFALKTWIHYLYGEKFEVYSDHKSLKYIF 1058 Query: 3946 SQKELNMRQRRWMEYLKDYDFTLHYHPGKANVVADALSRRKESVLAQMMLSEWHMLESVI 4125 +QK+LN RQRRWME L+DYDF LHYHPGKANVVADALSR+ L + L E+ M +VI Sbjct: 1059 TQKDLNSRQRRWMETLEDYDFALHYHPGKANVVADALSRKSYGQLFSLGLREFEMY-AVI 1117 Query: 4126 EFVFDSPKNEDRQHSYLAPLRLHNTLTQRIVESQNLDA--DVVEHCLKAGDSENHEWNIH 4299 E F+ ++ + L + + QRIVE+Q D + V+ L AG+ + + W+++ Sbjct: 1118 ED-FELCLVQEGRGPCLYSISARPMVIQRIVEAQVHDEFLEKVKAQLVAGEIDEN-WSMY 1175 Query: 4300 ADGSIRFQNRLWIPTDEQLRKDILGEAHRSRYSIHPGGTKMYRDLRKHFWWPGMKKHIAQ 4479 DGS+RF+ RL +P D +LR ++L +AHR++Y+IHPG TKMY+DL++ F W GMK+ IAQ Sbjct: 1176 EDGSVRFKGRLCVPKDVELRNELLADAHRAKYTIHPGNTKMYQDLKRQFXWSGMKRDIAQ 1235 Query: 4480 YVNRCMTCQQVKAEHQRPAGLLQPLPVAEWKWEHVTMDFVTGLPKASDGLDAIWVIVDRL 4659 +V C CQQVKAEHQRPA LLQPLP+ +WKW+++TMDFV GLP+ + +WVIVDRL Sbjct: 1236 FVANCQICQQVKAEHQRPAELLQPLPIPKWKWDNITMDFVIGLPRTRSKKNGVWVIVDRL 1295 Query: 4660 TKSAHFLPIKMTHTVDRLSRLYIAEIVRLHGIPVSIVSDRDPRFTSQFWKSLQSALGTQL 4839 TKSAHFL +K T +++ L++LYI EIVRLHGIPVSIVSDRDP+FTSQFW+SLQ ALGTQL Sbjct: 1296 TKSAHFLAMKTTDSMNSLAKLYIQEIVRLHGIPVSIVSDRDPKFTSQFWQSLQRALGTQL 1355 Query: 4840 KFSTAFHPQTDGQSERVIQILEDMLRACVLDFGGQWKTHLPLVEFSYNNSFQSSIGMAPF 5019 FST FHPQTDGQSERVIQILEDMLRACVLDFGG W +LPL EF+YNN +QSSIGMAP+ Sbjct: 1356 NFSTVFHPQTDGQSERVIQILEDMLRACVLDFGGNWADYLPLAEFAYNNXYQSSIGMAPY 1415 Query: 5020 EALYGRPCRSPICWTEVGDTILMGPELVEETTEKIRMVQERIKAAQSRQKNYADKRRRPL 5199 EALYGRPCRSP+CW E+G++ L+GPE+V+ETTEKI++++E++K AQ RQKNYADKRRRPL Sbjct: 1416 EALYGRPCRSPLCWIEMGESHLLGPEIVQETTEKIQLIKEKLKTAQDRQKNYADKRRRPL 1475 Query: 5200 EFEVGDMVFLKISPKRGISRFGLKGKLKPRYVGPFEITERVGQVAYRLVLPSQLAQIHNV 5379 EFE GD VF+K+SP+RGI RFG KGKL PR+VGPF+I +RVG V Y+L+LP QL+ +H+V Sbjct: 1476 EFEEGDWVFVKVSPRRGIFRFGKKGKLAPRFVGPFQIDKRVGPVTYKLILPQQLSLVHDV 1535 Query: 5380 FHVSMLRKYEPDPSHILDWQSLQLEEDVSYEEGPVQII 5493 FHVSMLRK PDP+ ++D Q +Q+ ED SY E P++I+ Sbjct: 1536 FHVSMLRKCTPDPTWVVDLQDVQISEDTSYVEEPLRIL 1573 >ref|XP_007200265.1| hypothetical protein PRUPE_ppa015000mg [Prunus persica] gi|462395665|gb|EMJ01464.1| hypothetical protein PRUPE_ppa015000mg [Prunus persica] Length = 1493 Score = 1418 bits (3671), Expect = 0.0 Identities = 730/1411 (51%), Positives = 960/1411 (68%), Gaps = 19/1411 (1%) Frame = +1 Query: 1372 LQNFQRLRPPRFGGSSDPAVVEEWVLRTREILITMQCPRDQWVPVAAFQFDGDASHWWRS 1551 ++ + L F GS+DPA E W+ I ++CP + V +A F G+A HWW++ Sbjct: 74 IKRVKELGAKEFVGSTDPAEAESWITDVERIFEVLECPAEDRVRLATFLLKGNAYHWWKA 133 Query: 1552 -ERNVLGDGPVEWADFERMFLDRFISETAREIKQQEFSGMVQGNLTVTDYELRFTRLSRY 1728 +R + W +F+R+F ++F + R K+ EF + QG+++V +YE +F LSR+ Sbjct: 134 VKRGYENPAAINWEEFQRVFSEQFYPPSYRHAKKSEFLYLKQGSMSVMEYEHKFNELSRF 193 Query: 1729 ALELIPTDLQKARRFFRGLRPYLRAKMSVIETTNYRDTVSRAQRVEREDMEL--QTSRRL 1902 A EL+ T+ + RRF GL ++A VI Y + + A VER +L RR Sbjct: 194 APELVATEEDRCRRFEEGLWWEIQA---VITANTYPNMRALAHAVERVSRKLGGNVGRRR 250 Query: 1903 TSRPQASFPPRADPAKRPMYSRPSASVPTYSQYQTPTPSSYXXXXXXXXXXXXXXLTRQI 2082 P P + P+KR S SAS + + S L + Sbjct: 251 RDTPGIGGPSQG-PSKRGGSSSSSASGGWSEGRGSSSSSGRSGSRPAWTQYSGHSLQLAL 309 Query: 2083 PRS-PASQRLIQAGPLTCYGCGEAGHMKRNCPRLXXXXXXXXXXXXRPQGRVYALTHEEY 2259 P P + + G +G R P Q RV+++T +E Sbjct: 310 PGLLPGTLAGSSSSKAPSSSRGRSGRQSRGQP-----------GRSTTQARVFSMTQQEA 358 Query: 2260 QPSHEVMEGNLILSNMQVHVLIDTGSSNSFISTRLASMLELDVENTGKILSLSTPLGNNT 2439 + +V+ G + + VLID G+++SF++ + + S+S P G Sbjct: 359 YATPDVITGMIPIFGYLARVLIDPGATHSFVAHNFIPYISIRPTPITGSFSISLPTGEVL 418 Query: 2440 IPKSVCKNCVIRLVDQELSTDLILLELNDFDVILGMDWLVRNHAHVDCYSRIVTFKIPGR 2619 V +NC +++ D L +LI L+L D D+ILGMDWL ++HA VDC+ + VT + PG+ Sbjct: 419 YADRVFRNCFVQVDDAWLEANLIPLDLVDLDIILGMDWLEKHHASVDCFRKEVTLRSPGQ 478 Query: 2620 PILKFMG--------------FKNRIEKYLKSKLNNLTTEEKAVPELVEIPVVRDFRSLF 2757 P + F G K ++K + L ++ + L +IPVV +F ++F Sbjct: 479 PKVTFRGERRVLPTCLISAITAKKLLKKGYEGYLAHIIDTREITLNLEDIPVVCEFPNIF 538 Query: 2758 PEELPGLPPIRAIEFSIDLIPGTAPISITPYRMAPAETRELKSQIDELTHLGFIRPSFSP 2937 P++LPGLPP R IEF+ID +PGT PI TPYRMAPAE RELK Q+ EL L FIRPS SP Sbjct: 539 PDDLPGLPPKREIEFTIDFLPGTNPIYQTPYRMAPAELRELKIQLQELVDLRFIRPSVSP 598 Query: 2938 WGAPVLFVKKKDGSFRLCIDYRRLNQVTIKNKYPLPRIEDLFDQLQGAQYFSKIDLRSGY 3117 WGAPVLFV+K+DG+ RLCIDYR+LN+VTI+N+YPLPRI+DLFDQL+GA+YFSKIDLRSGY Sbjct: 599 WGAPVLFVRKQDGTMRLCIDYRQLNKVTIRNRYPLPRIDDLFDQLKGAKYFSKIDLRSGY 658 Query: 3118 HQLKIKEDDIPKTAFRTRLGHYEYLVMPFGLTNAPAAFMDLMNRVFWEYLDKFVIVFIDD 3297 HQL+I+E+DIP TA RTR GHYE+LVMPFGLTNAPAAFMDLMNRVF YLD FVIVFIDD Sbjct: 659 HQLRIREEDIPNTALRTRYGHYEFLVMPFGLTNAPAAFMDLMNRVFRPYLDHFVIVFIDD 718 Query: 3298 ILIYXXXXXXXXXXLKITLQTLQDHQLYAKFSKCEFWLKEVKFLGHVVSSKGVSVDPSKI 3477 IL+Y L++ L+TL+ QLYAKFSKC+FWL V FLGHV+S++G+ VDP K+ Sbjct: 719 ILVYSQTLEGHKKHLRVVLRTLRRKQLYAKFSKCQFWLDIVVFLGHVISAEGIYVDPQKV 778 Query: 3478 EAVTSWKQPTSVAEIRSFLGLAGYYRRFVEGFSMIASPLTRLTQKNVKYEWDDRCEAAFQ 3657 EA+ +W Q TSV EIRSFLGLAGYYRRFVEGFS IA+PLTRLT+K++ +EW + CE +FQ Sbjct: 779 EAIVNWVQSTSVTEIRSFLGLAGYYRRFVEGFSSIAAPLTRLTRKDIAFEWTEECEQSFQ 838 Query: 3658 ELKTRLTTAPVLIAPVPGESLVIYTDASGIGLGCVLMQNGKVIAYASRKLKTHEKNYPAH 3837 ELK RLTTAPVL P + VIY+DAS GLGCVLMQ+ +VIAYASR+LK HE+NYP H Sbjct: 839 ELKKRLTTAPVLALPDNAGNFVIYSDASLQGLGCVLMQHDRVIAYASRQLKKHEQNYPVH 898 Query: 3838 DLELASIVFSLKIWRHYLYGEKFELFSDHKSLKYIFSQKELNMRQRRWMEYLKDYDFTLH 4017 DLELA++VF+LKIWRHYLYGE ++F+DHKSLKY F+Q+ELNMRQRRW+E +KDYD T+ Sbjct: 899 DLELAAVVFALKIWRHYLYGETCQIFTDHKSLKYFFTQRELNMRQRRWLELIKDYDCTIE 958 Query: 4018 YHPGKANVVADALSRRKESVLAQMMLSEWHMLESVIEFVFDSPKNE-DRQHSYLAPLRLH 4194 Y+PG+ANVVADALSR+ L + + L ++E D + E +Q LA L + Sbjct: 959 YYPGRANVVADALSRKTTGSLTHLRTT---YLPLLVELRKDGVELEMTQQGGILASLHVR 1015 Query: 4195 NTLTQRIVESQNLDADVVEHCLKAGDSENHEWNIHADGSIRFQNRLWIPTDEQLRKDILG 4374 L +RI+ +Q D + + ++ I DG++ RL +P ++ L+++IL Sbjct: 1016 PILVERIIVAQLGDPTLCRIRGEVESGSRKDYAIRGDGALVTGTRLHVPKNDYLKREILE 1075 Query: 4375 EAHRSRYSIHPGGTKMYRDLRKHFWWPGMKKHIAQYVNRCMTCQQVKAEHQRPAGLLQPL 4554 EAH S Y++HPG TKMYR LR+++ WP MK IA+YV+RC+ CQQVKAE Q+P+GL+QPL Sbjct: 1076 EAHCSTYTMHPGSTKMYRTLREYYSWPHMKGDIAKYVSRCLICQQVKAERQKPSGLMQPL 1135 Query: 4555 PVAEWKWEHVTMDFVTGLPKASDGLDAIWVIVDRLTKSAHFLPIKMTHTVDRLSRLYIAE 4734 P+ EWKWE +TMDFV LP+ S G D IWVIVDRLTKS HFLPIK T+++ +L++L++ E Sbjct: 1136 PIPEWKWERITMDFVFKLPRTSKGHDGIWVIVDRLTKSTHFLPIKETYSLTKLAKLFVDE 1195 Query: 4735 IVRLHGIPVSIVSDRDPRFTSQFWKSLQSALGTQLKFSTAFHPQTDGQSERVIQILEDML 4914 IVRLHG PVSIVSDRD RFTS+FWK LQ A+GT+L+FSTAFHPQTDGQSER IQ LEDML Sbjct: 1196 IVRLHGAPVSIVSDRDARFTSRFWKCLQEAMGTRLQFSTAFHPQTDGQSERTIQTLEDML 1255 Query: 4915 RACVLDFGGQWKTHLPLVEFSYNNSFQSSIGMAPFEALYGRPCRSPICWTEVGDTILMGP 5094 R+CVL W THL LVEF+YNNS+ +SI MAP+EALYGR CR+PICW EVGD L Sbjct: 1256 RSCVLQMKDSWDTHLALVEFAYNNSYHASIKMAPYEALYGRQCRTPICWNEVGDKKLEKV 1315 Query: 5095 ELVEETTEKIRMVQERIKAAQSRQKNYADKRRRPLEFEVGDMVFLKISPKRGISRFGLKG 5274 + ++ TTEK++M++E++K AQ RQK+YAD R + LEF VGD VFLK+SP +G+ RFG +G Sbjct: 1316 DSIQATTEKVKMIKEKLKIAQDRQKSYADNRSKDLEFAVGDWVFLKLSPWKGVMRFGKRG 1375 Query: 5275 KLKPRYVGPFEITERVGQVAYRLVLPSQLAQIHNVFHVSMLRKYEPDPSHILDWQSLQLE 5454 KL PRY+GP+EITER+G VAYRL LP++L+Q+H+VFHVSMLRKY DPSHIL++Q +++E Sbjct: 1376 KLSPRYIGPYEITERIGPVAYRLALPAELSQVHDVFHVSMLRKYMSDPSHILEYQPVEVE 1435 Query: 5455 EDVSYEEGPVQIIGRKEKMLRSRVIPLVKVL 5547 ED+SYEE PVQI+ RKE+MLRSR IP+VKVL Sbjct: 1436 EDLSYEEQPVQILDRKEQMLRSRFIPVVKVL 1466 >emb|CAH65904.1| H0207B04.5 [Oryza sativa Indica Group] Length = 1481 Score = 1313 bits (3398), Expect = 0.0 Identities = 677/1403 (48%), Positives = 913/1403 (65%), Gaps = 12/1403 (0%) Frame = +1 Query: 1372 LQNFQRLRPPRFGGSSDPAVVEEWVLRTREILITMQCPRDQWVPVAAFQFDGDASHWWRS 1551 L +F R+RPP F +++P +W+ + L +QC + V A+ Q G A+ WW Sbjct: 63 LADFLRVRPPTFSSTTNPVEAGDWLHAVEKKLDLIQCTEQEKVSFASHQLHGPAAEWWDH 122 Query: 1552 ERNV-LGDGPVEWADFERMFLDRFISETAREIKQQEFSGMVQGNLTVTDYELRFTRLSRY 1728 R +G P+ W +F F I +K++EF + QG+ +VT+Y F RL+RY Sbjct: 123 FRQGRVGGEPITWQEFTAAFKKTHIPTGVVALKKREFRALNQGSRSVTEYLHDFNRLARY 182 Query: 1729 ALELIPTDLQKARRFFRGLRPYLRAKMSVIETTNYRDTVSRAQRVEREDMELQTSRRLTS 1908 A E + TD ++ +F GL L + E +++ V +A R E + ++ +R Sbjct: 183 APEDVRTDEERQEKFLEGLNDELSYTLMSTEFRDFQQLVDKAIRQEDKYNRMEQKKRRA- 241 Query: 1909 RPQASFPPRADPAKRPMYSRPSASVPTYSQYQT-----PTPSSYXXXXXXXXXXXXXXLT 2073 A F + +RP S VP+Y Q + P Y + Sbjct: 242 ---AQFKAQQGSNQRPRLVTGS-QVPSYPQVGSSSVVRPQRQFYNNNTGNRGNGNRNVVV 297 Query: 2074 RQIPRSPASQ--RLIQAG-PLTCYGCGEAGHMKRNCP---RLXXXXXXXXXXXXRPQGRV 2235 R +Q R Q G P+ C+ CG+ GH CP R+ P+ RV Sbjct: 298 RPAVTPTQNQPVRKEQGGKPVICFNCGDPGHYADKCPKPRRVKNAPASTNSNVPAPKARV 357 Query: 2236 YALTHEEYQPSHEVMEGNLILSNMQVHVLIDTGSSNSFISTRLASMLELDVENTGKILSL 2415 + E Q + +V+ G ++++ VL D+G+++SF+S AS ++V + G+ L + Sbjct: 358 NHVAAAEAQNAPDVVLGTFPVNSIPATVLFDSGATHSFLSKSFASKHGMEVVSLGRPLLV 417 Query: 2416 STPLGNNTIPKSVCKNCVIRLVDQELSTDLILLELNDFDVILGMDWLVRNHAHVDCYSRI 2595 +TP GN C + I + + + LILLE D DVILGMDWL R+ +DC +R Sbjct: 418 NTP-GNQVFSTQYCPSVTIEIEEVPFPSSLILLESKDLDVILGMDWLSRHRGVIDCANRK 476 Query: 2596 VTFKIPGRPILKFMGFKNRIEKYLKSKLNNLTTEEKAVPELVEIPVVRDFRSLFPEELPG 2775 VT + F + + +++ L EIP+V+D+ +FPE+LPG Sbjct: 477 VTLTNSNGETVSFFASSPKSHGVILNQV-----------ALQEIPIVQDYPDVFPEDLPG 525 Query: 2776 LPPIRAIEFSIDLIPGTAPISITPYRMAPAETRELKSQIDELTHLGFIRPSFSPWGAPVL 2955 +PP R IEF IDL+PGT PI PYRMA E E+K Q+D+L G+IRPS PWGAPV+ Sbjct: 526 MPPKRDIEFRIDLVPGTNPIHKRPYRMAANELAEVKKQVDDLLQKGYIRPSTLPWGAPVI 585 Query: 2956 FVKKKDGSFRLCIDYRRLNQVTIKNKYPLPRIEDLFDQLQGAQYFSKIDLRSGYHQLKIK 3135 FV+KKD + R+C+DYR LN+VTIKNKYPLPRI+DLFDQL+GA FSKIDLRSGYHQL+I+ Sbjct: 586 FVEKKDHTQRMCVDYRALNEVTIKNKYPLPRIDDLFDQLEGATVFSKIDLRSGYHQLRIR 645 Query: 3136 EDDIPKTAFRTRLGHYEYLVMPFGLTNAPAAFMDLMNRVFWEYLDKFVIVFIDDILIYXX 3315 E+DIPKTAF TR G +E VM FGLTNAPA FM+LMN+VF EYLDKFV+VFIDDILIY Sbjct: 646 EEDIPKTAFTTRYGLFECTVMSFGLTNAPAFFMNLMNKVFMEYLDKFVVVFIDDILIYSK 705 Query: 3316 XXXXXXXXLKITLQTLQDHQLYAKFSKCEFWLKEVKFLGHVVSSKGVSVDPSKIEAVTSW 3495 L++ L+ L++HQLYAKFSKCEFWL EVKFLGHV+SS GV+VDPS +E+V SW Sbjct: 706 TKEEHEEHLRLALEKLREHQLYAKFSKCEFWLSEVKFLGHVISSGGVAVDPSNVESVLSW 765 Query: 3496 KQPTSVAEIRSFLGLAGYYRRFVEGFSMIASPLTRLTQKNVKYEWDDRCEAAFQELKTRL 3675 KQP +V+E+RSFLGLAGYYRRF+E FS IA P+TRL QK VK++W + CE +FQELK RL Sbjct: 766 KQPKTVSEVRSFLGLAGYYRRFIENFSKIARPMTRLLQKEVKFKWTEDCERSFQELKERL 825 Query: 3676 TTAPVLIAPVPGESLVIYTDASGIGLGCVLMQNGKVIAYASRKLKTHEKNYPAHDLELAS 3855 TAPVLI P + +Y DAS +GLGCVLMQ GKV+AYASR+L+ HE NYP HDLELA+ Sbjct: 826 VTAPVLILPDSRKGFQVYCDASRLGLGCVLMQEGKVVAYASRQLRPHENNYPTHDLELAA 885 Query: 3856 IVFSLKIWRHYLYGEKFELFSDHKSLKYIFSQKELNMRQRRWMEYLKDYDFTLHYHPGKA 4035 +V +LKIWRHYLYG + E+++DHKSLKYIF+Q +LNMRQRRW+E +KDYD +HYHPGKA Sbjct: 886 VVHALKIWRHYLYGNRTEIYTDHKSLKYIFTQPDLNMRQRRWLELIKDYDMEIHYHPGKA 945 Query: 4036 NVVADALSRRKESVLAQMMLSEWHMLESVIEFVFDSPKNEDRQHSYLAPLRLHNTLTQRI 4215 NVVADALSR+ +++ W + + F+ ++A L TL +I Sbjct: 946 NVVADALSRKSYCNMSEGRSLPWELCQE-----FEKLNLGIVSKGFMAALEAKPTLFDQI 1000 Query: 4216 VESQNLDADVVEHCLKAGDSENHEWNIHADGSIRFQNRLWIPTDEQLRKDILGEAHRSRY 4395 E+Q D D+ E + + G++ R+ +P +++L+ I+ EAH + Y Sbjct: 1001 REAQVNDPDIQEIKKNMRRGKAVGFVEDEQGTVWLGERICVPENKELKVTIMKEAHETLY 1060 Query: 4396 SIHPGGTKMYRDLRKHFWWPGMKKHIAQYVNRCMTCQQVKAEHQRPAGLLQPLPVAEWKW 4575 SIHPG TKMY+DL++ FWW M++ IA+YV C CQ+VKAEHQ+PAGLLQPL + EWKW Sbjct: 1061 SIHPGSTKMYQDLKQQFWWASMRREIAEYVALCDECQRVKAEHQKPAGLLQPLKIPEWKW 1120 Query: 4576 EHVTMDFVTGLPKASDGLDAIWVIVDRLTKSAHFLPIKMTHTVDRLSRLYIAEIVRLHGI 4755 E + MDF+TGLP+ S G D+IWV+VDRLTK AHF+P+K T+T +L+ LY+A +V LHG+ Sbjct: 1121 EEIGMDFITGLPRTSAGHDSIWVVVDRLTKVAHFIPVKTTYTGHKLAELYMARVVCLHGV 1180 Query: 4756 PVSIVSDRDPRFTSQFWKSLQSALGTQLKFSTAFHPQTDGQSERVIQILEDMLRACVLDF 4935 P IVSDR +FTS+FW+ LQS LGT+L FSTA+HPQTDGQ+ERV +ILEDMLRACVLDF Sbjct: 1181 PKKIVSDRGSQFTSKFWQKLQSELGTRLNFSTAYHPQTDGQTERVNKILEDMLRACVLDF 1240 Query: 4936 GGQWKTHLPLVEFSYNNSFQSSIGMAPFEALYGRPCRSPICWTEVGDTILMGPELVEETT 5115 GG W +LP EFSYNNS+Q+S+ M+P EALYGR CR+P+ W + G+ + G +++ E Sbjct: 1241 GGSWDKNLPYAEFSYNNSYQASLQMSPNEALYGRKCRTPLLWDQTGERQVFGTDILREAE 1300 Query: 5116 EKIRMVQERIKAAQSRQKNYADKRRRPLEFEVGDMVFLKISPKRGISRFGLKGKLKPRYV 5295 EK++++QER++ AQSRQK+YAD RRR L FE GD V+L+++P RG+ RF KGKL PR+V Sbjct: 1301 EKVKIIQERLRVAQSRQKSYADNRRRDLVFEEGDYVYLRVTPLRGVHRFQTKGKLAPRFV 1360 Query: 5296 GPFEITERVGQVAYRLVLPSQLAQIHNVFHVSMLRKYEPDPSHILDWQSLQLEEDVSYEE 5475 GPF+I R G+VAY+L LP +A IH+VFHVS L+K P+ D ++L+ED++Y E Sbjct: 1361 GPFKIVSRRGEVAYQLELPPSMAGIHDVFHVSQLKKCLRVPTEEADPSRIELQEDLTYVE 1420 Query: 5476 GPVQIIGRKEKMLRSRVIPLVKV 5544 PV+I+ E+ R+RVI KV Sbjct: 1421 KPVRILEVSERKTRNRVIRFCKV 1443 >dbj|BAH80025.1| putative retrotransposon protein [Oryza sativa Indica Group] Length = 1727 Score = 1310 bits (3389), Expect = 0.0 Identities = 676/1405 (48%), Positives = 914/1405 (65%), Gaps = 14/1405 (0%) Frame = +1 Query: 1372 LQNFQRLRPPRFGGSSDPAVVEEWVLRTREILITMQCPRDQWVPVAAFQFDGDASHWWRS 1551 L +F R+RPP F +++P +W+ + L +QC + V A+ Q G A+ WW Sbjct: 309 LADFLRVRPPTFSSTTNPVEAGDWLHAVEKKLDLIQCTEQEKVSFASHQLHGPAAEWWDH 368 Query: 1552 ERNVLGDG-PVEWADFERMFLDRFISETAREIKQQEFSGMVQGNLTVTDYELRFTRLSRY 1728 R G P+ W +F F I +K++EF + QG+ +VT+Y F RL+RY Sbjct: 369 FRQGRAGGEPITWQEFTAAFKKTHIPTGVVALKKREFRALSQGSRSVTEYLHDFNRLARY 428 Query: 1729 ALELIPTDLQKARRFFRGLRPYLRAKMSVIETTNYRDTVSRAQRVEREDMELQTSRRLTS 1908 A E + TD ++ +F GL L + E +++ V +A R E + ++ +R Sbjct: 429 APEDVRTDEERQEKFLEGLNDELSYTLMSTEFRDFQQLVDKAIRQEDKYNRMEQKKRRA- 487 Query: 1909 RPQASFPPRADPAKRPMYSRPSASVPTYSQYQT-----PTPSSYXXXXXXXXXXXXXXLT 2073 A F + +RP VP+Y Q + P Y + Sbjct: 488 ---AQFKAQQGSNQRPRLIT-GPQVPSYPQGGSSSVVRPQRQFYNNNTGNRGNDNRNVVA 543 Query: 2074 RQIPRSPASQRLIQ---AGPLTCYGCGEAGHMKRNCP---RLXXXXXXXXXXXXRPQGRV 2235 R S +Q + + + P+ C+ CG+ GH CP R+ P+ RV Sbjct: 544 RPAATSTQNQSVRKDQGSKPVICFNCGDPGHYADKCPKPRRVKNAPVPNNSNASAPKARV 603 Query: 2236 YALTHEEYQPSHEVMEGNLILSNMQVHVLIDTGSSNSFISTRLASMLELDVENTGKILSL 2415 + E Q + +V+ G ++++ VL D+G+++SF+S A+ ++V + G+ L + Sbjct: 604 NHVAAAEAQNAPDVVLGTFPVNSIPATVLFDSGATHSFLSKSFATKHGMEVVSLGRPLLV 663 Query: 2416 STPLGNNTIPKSVCKNCVIRLVDQELSTDLILLELNDFDVILGMDWLVRNHAHVDCYSRI 2595 +TP GN C + I + + + LILLE D DVILGMDWL R+ +DC +R Sbjct: 664 NTP-GNQVSSTRYCPSVTIEIEEVLFPSSLILLESKDLDVILGMDWLSRHRGVIDCANRK 722 Query: 2596 VTFKIPGRPILKFMGFKNRIEKYLKSKLNNLTTEEKAVPELVEIPVVRDFRSLFPEELPG 2775 VT + F + + +++ L EIP+V+D+ +FPE+LPG Sbjct: 723 VTLTNSNGETVSFFASSPKSHGVVLNQV-----------ALQEIPIVQDYPDVFPEDLPG 771 Query: 2776 LPPIRAIEFSIDLIPGTAPISITPYRMAPAETRELKSQIDELTHLGFIRPSFSPWGAPVL 2955 +PP R IEF IDL+PGT PI PYRMA E E+K Q+D+L G+IRPS SPWGAPV+ Sbjct: 772 MPPKRDIEFRIDLVPGTNPIHKRPYRMAANELAEVKKQVDDLLQKGYIRPSTSPWGAPVI 831 Query: 2956 FVKKKDGSFRLCIDYRRLNQVTIKNKYPLPRIEDLFDQLQGAQYFSKIDLRSGYHQLKIK 3135 FV+KKD + R+C+DYR LN+VTIKNKYPLPRI+DLFDQL+GA FSKIDLRSGYHQL+I+ Sbjct: 832 FVEKKDHTQRMCVDYRALNEVTIKNKYPLPRIDDLFDQLEGATVFSKIDLRSGYHQLRIR 891 Query: 3136 EDDIPKTAFRTRLGHYEYLVMPFGLTNAPAAFMDLMNRVFWEYLDKFVIVFIDDILIYXX 3315 E+DIPKTAF TR G +E VM FGLTNAPA FM+LMN+VF EYLDKFV+VFIDDILIY Sbjct: 892 EEDIPKTAFTTRYGLFECTVMSFGLTNAPAFFMNLMNKVFMEYLDKFVVVFIDDILIYSK 951 Query: 3316 XXXXXXXXLKITLQTLQDHQLYAKFSKCEFWLKEVKFLGHVVSSKGVSVDPSKIEAVTSW 3495 L++ L+ L++HQLYAKFSKCEFWL EVKFLGHV+SS GV+VDPS +E+V SW Sbjct: 952 TKEEHEEHLRLALEKLREHQLYAKFSKCEFWLSEVKFLGHVISSGGVAVDPSNVESVLSW 1011 Query: 3496 KQPTSVAEIRSFLGLAGYYRRFVEGFSMIASPLTRLTQKNVKYEWDDRCEAAFQELKTRL 3675 KQP +V+E+RSFLGLAGYYRRF+E FS IA P+TRL QK+ KY+W + CE +FQELK RL Sbjct: 1012 KQPKTVSEVRSFLGLAGYYRRFIENFSKIARPMTRLLQKDGKYKWTEDCERSFQELKKRL 1071 Query: 3676 TTAPVLIAPVPGESLVIYTDASGIGLGCVLMQNGKVIAYASRKLKTHEKNYPAHDLELAS 3855 +APVLI P + +Y DAS GLGCVLMQ GKV+AYASR+L+ HE NYP HDLELA+ Sbjct: 1072 VSAPVLILPDSRKDFQVYCDASRHGLGCVLMQEGKVVAYASRQLRPHENNYPTHDLELAA 1131 Query: 3856 IVFSLKIWRHYLYGEKFELFSDHKSLKYIFSQKELNMRQRRWMEYLKDYDFTLHYHPGKA 4035 +V +LKIWRHYLYG + E+++DHKSLKYIF+Q +LNMRQRRW+E +KDYD +HYHPGKA Sbjct: 1132 VVHALKIWRHYLYGNRTEIYTDHKSLKYIFTQPDLNMRQRRWLELIKDYDMEIHYHPGKA 1191 Query: 4036 NVVADALSRRKESVLAQMMLSEWHMLESVIEFVFDSPKNEDRQHSYLAPLRLHNTLTQRI 4215 NVVADALSR+ +++ W + + F+ ++A L TL +I Sbjct: 1192 NVVADALSRKSYCNMSEGRCLPWELCQE-----FEKLNLGIVSKGFVATLEAKPTLFDQI 1246 Query: 4216 VESQNLDADVVEHCLKAGDSENHEWNIHAD--GSIRFQNRLWIPTDEQLRKDILGEAHRS 4389 E+Q D D+ E +K D G++ R+ +P +++L+ I+ EAH + Sbjct: 1247 REAQVNDPDIQE--IKKNMRRGKAIGFVEDERGTVWLGERICVPENKELKDTIMKEAHET 1304 Query: 4390 RYSIHPGGTKMYRDLRKHFWWPGMKKHIAQYVNRCMTCQQVKAEHQRPAGLLQPLPVAEW 4569 YSIHPG TKMY+DL++ FWW M++ IA+YV C CQ+VKAEHQRPAGLLQPL + EW Sbjct: 1305 LYSIHPGSTKMYQDLKQQFWWASMRREIAEYVALCDVCQRVKAEHQRPAGLLQPLKIPEW 1364 Query: 4570 KWEHVTMDFVTGLPKASDGLDAIWVIVDRLTKSAHFLPIKMTHTVDRLSRLYIAEIVRLH 4749 KWE + MDF+TGLP+ S G D+IWV+VDRLTK AHF+P+K T+T +L+ LY+A +V LH Sbjct: 1365 KWEEIGMDFITGLPRTSAGHDSIWVVVDRLTKVAHFIPVKTTYTGHKLAELYMARVVCLH 1424 Query: 4750 GIPVSIVSDRDPRFTSQFWKSLQSALGTQLKFSTAFHPQTDGQSERVIQILEDMLRACVL 4929 G+P IVSDR +FTS+FW+ LQS LGT+L FSTA+HPQTDGQ+ERV QILEDMLRACVL Sbjct: 1425 GVPKKIVSDRGSQFTSKFWQKLQSELGTRLNFSTAYHPQTDGQTERVNQILEDMLRACVL 1484 Query: 4930 DFGGQWKTHLPLVEFSYNNSFQSSIGMAPFEALYGRPCRSPICWTEVGDTILMGPELVEE 5109 DFGG W +LP EFSYNNS+Q+S+ M+P EALYGR CR+P+ W ++G+ + G +++ E Sbjct: 1485 DFGGSWDKNLPYPEFSYNNSYQASLQMSPNEALYGRKCRTPLLWDQIGERQVFGTDILRE 1544 Query: 5110 TTEKIRMVQERIKAAQSRQKNYADKRRRPLEFEVGDMVFLKISPKRGISRFGLKGKLKPR 5289 EK++++Q+R++ AQSRQK+YAD RRR L FE GD V+L+++P RG+ RF KGKL PR Sbjct: 1545 AEEKVKIIQQRLRVAQSRQKSYADNRRRDLTFEEGDYVYLRVTPLRGVHRFQTKGKLAPR 1604 Query: 5290 YVGPFEITERVGQVAYRLVLPSQLAQIHNVFHVSMLRKYEPDPSHILDWQSLQLEEDVSY 5469 +VGPF+I R G+VAY+L LP +A IH+VFHVS L+K P+ D ++L+ED++Y Sbjct: 1605 FVGPFKIVSRRGEVAYQLELPPSMAGIHDVFHVSQLKKCLRVPTEEADPDRIELQEDLTY 1664 Query: 5470 EEGPVQIIGRKEKMLRSRVIPLVKV 5544 E PV+I+ E+ R+RVI KV Sbjct: 1665 VEKPVRILEVSERKTRNRVIRFCKV 1689 >gb|ABA97812.1| retrotransposon protein, putative, Ty3-gypsy subclass [Oryza sativa Japonica Group] Length = 1702 Score = 1309 bits (3387), Expect = 0.0 Identities = 674/1399 (48%), Positives = 909/1399 (64%), Gaps = 8/1399 (0%) Frame = +1 Query: 1372 LQNFQRLRPPRFGGSSDPAVVEEWVLRTREILITMQCPRDQWVPVAAFQFDGDASHWWRS 1551 L +F R+RPP F +++P +W+ + L +QC + V A+ Q G A+ WW Sbjct: 284 LADFLRVRPPTFSSTTNPVEAGDWLHAVEKKLDLIQCTEQEKVSFASHQLHGPAAEWWDH 343 Query: 1552 ERNVLGDG-PVEWADFERMFLDRFISETAREIKQQEFSGMVQGNLTVTDYELRFTRLSRY 1728 R +G P+ W +F F I +K++EF + QG+ +VT+Y F RL+RY Sbjct: 344 FRQGRAEGEPITWQEFTAAFKKTHIPAGVVALKKREFRALNQGSRSVTEYLHDFNRLARY 403 Query: 1729 ALELIPTDLQKARRFFRGLRPYLRAKMSVIETTNYRDTVSRAQRVEREDMELQTSRRLTS 1908 A E + TD ++ +F GL L + + +++ V +A R E + ++ +R + Sbjct: 404 APEDVRTDEERQEKFLEGLNDELSYALMSTDFRDFQQLVDKAIRQEDKYNRMEQKKRRAA 463 Query: 1909 RPQASFPPRADPAKRPMYSRPSASVPTYSQYQTPTPSSYXXXXXXXXXXXXXXLTRQIPR 2088 + +A P PS S P Y + R Sbjct: 464 QFKAQQGSNQRPRLVIGPQAPSYPQGGSSSVIRPQRQFYNNNTGNRGNDNRNVVARPAA- 522 Query: 2089 SPASQRLIQ----AGPLTCYGCGEAGHMKRNCP---RLXXXXXXXXXXXXRPQGRVYALT 2247 +PA + ++ + P+ C+ CG+ GH CP R+ P+ RV + Sbjct: 523 TPAQNQPVRKEQGSKPVVCFNCGDPGHYADKCPKPRRVKNAPAPNNSNVPVPKARVNHVV 582 Query: 2248 HEEYQPSHEVMEGNLILSNMQVHVLIDTGSSNSFISTRLASMLELDVENTGKILSLSTPL 2427 E Q + V+ G ++++ VL D+G+++SF+S AS ++V + G+ L ++TP Sbjct: 583 AAEAQNAPYVVLGTFPVNSIPATVLFDSGATHSFLSKSFASNHGMEVVSLGRPLLVNTP- 641 Query: 2428 GNNTIPKSVCKNCVIRLVDQELSTDLILLELNDFDVILGMDWLVRNHAHVDCYSRIVTFK 2607 GN C + I + + + LILLE D DVILGMDWL R+ +DC +R VT Sbjct: 642 GNQVFSTQYCPSATIEIEEVPFPSSLILLESKDLDVILGMDWLSRHRGVIDCVNRKVTLT 701 Query: 2608 IPGRPILKFMGFKNRIEKYLKSKLNNLTTEEKAVPELVEIPVVRDFRSLFPEELPGLPPI 2787 + F K + + + A L EIP+V+D+ +FPE+LPGLPP Sbjct: 702 SSNGETVSFF--------VSSPKSHGVNLNQVA---LQEIPIVQDYPDVFPEDLPGLPPK 750 Query: 2788 RAIEFSIDLIPGTAPISITPYRMAPAETRELKSQIDELTHLGFIRPSFSPWGAPVLFVKK 2967 R IEF IDL+PGT PI PYRMA E E+K Q+D+L G+IRPS SPWGAPV+FV+K Sbjct: 751 RDIEFRIDLVPGTNPIHKRPYRMAANELAEVKRQVDDLLQKGYIRPSTSPWGAPVIFVEK 810 Query: 2968 KDGSFRLCIDYRRLNQVTIKNKYPLPRIEDLFDQLQGAQYFSKIDLRSGYHQLKIKEDDI 3147 KD + R+C+DYR LN+VTIKNKYPLPRI+DLFDQL+GA FSKIDLRSGYHQL+I+E+DI Sbjct: 811 KDHTQRMCVDYRALNEVTIKNKYPLPRIDDLFDQLKGATVFSKIDLRSGYHQLRIREEDI 870 Query: 3148 PKTAFRTRLGHYEYLVMPFGLTNAPAAFMDLMNRVFWEYLDKFVIVFIDDILIYXXXXXX 3327 PKTAF TR G +E VM FGLTNAPA FM+LMN+VF EYLDKFV+VFIDDILIY Sbjct: 871 PKTAFTTRYGLFECTVMSFGLTNAPAFFMNLMNKVFMEYLDKFVVVFIDDILIYSKTKEE 930 Query: 3328 XXXXLKITLQTLQDHQLYAKFSKCEFWLKEVKFLGHVVSSKGVSVDPSKIEAVTSWKQPT 3507 L++ L+ L++HQLYAKFSKCEFWL EVKFLGHV+SS GV+VDPS +E+V SWKQP Sbjct: 931 HEEHLRLALEKLREHQLYAKFSKCEFWLSEVKFLGHVISSGGVAVDPSNVESVLSWKQPK 990 Query: 3508 SVAEIRSFLGLAGYYRRFVEGFSMIASPLTRLTQKNVKYEWDDRCEAAFQELKTRLTTAP 3687 +V+EIRSFLGLA YYRRF+E FS IA P+TRL QK VKY+W + CE +FQELK RL TAP Sbjct: 991 TVSEIRSFLGLARYYRRFIENFSKIARPMTRLLQKEVKYKWTEDCERSFQELKKRLVTAP 1050 Query: 3688 VLIAPVPGESLVIYTDASGIGLGCVLMQNGKVIAYASRKLKTHEKNYPAHDLELASIVFS 3867 VLI P + +Y DAS GLGCVLMQ GKV+AYASR+L+ HE NYP HDLELA++V + Sbjct: 1051 VLILPNSRKGFQVYCDASRHGLGCVLMQEGKVVAYASRQLRPHENNYPTHDLELAAVVHA 1110 Query: 3868 LKIWRHYLYGEKFELFSDHKSLKYIFSQKELNMRQRRWMEYLKDYDFTLHYHPGKANVVA 4047 LKIWRHYL+G + E+++DHKSLKYIF+Q +LNMRQRRW+E +KDYD +HYHPGKANVVA Sbjct: 1111 LKIWRHYLFGNRTEMYTDHKSLKYIFTQPDLNMRQRRWLELIKDYDMEIHYHPGKANVVA 1170 Query: 4048 DALSRRKESVLAQMMLSEWHMLESVIEFVFDSPKNEDRQHSYLAPLRLHNTLTQRIVESQ 4227 DALSR+ +++ W + + F+ ++A L TL ++ E+Q Sbjct: 1171 DALSRKSYCNMSEGRRLPWKLCQE-----FEKLNLGIVSKGFVATLEAQPTLFDQVREAQ 1225 Query: 4228 NLDADVVEHCLKAGDSENHEWNIHADGSIRFQNRLWIPTDEQLRKDILGEAHRSRYSIHP 4407 D D+ E + + G++ R+ +P +++L+ I+ EAH + YSIHP Sbjct: 1226 VNDPDIQEIKKNMRRGKAIGYVEDEQGTVWLGERICVPENKELKDTIMKEAHETLYSIHP 1285 Query: 4408 GGTKMYRDLRKHFWWPGMKKHIAQYVNRCMTCQQVKAEHQRPAGLLQPLPVAEWKWEHVT 4587 G TKMY+DL++ FWW M++ IA+YV C CQ+VKAEHQ+PAGLLQPL + EWKWE + Sbjct: 1286 GSTKMYQDLKQQFWWASMRREIAEYVALCDVCQRVKAEHQKPAGLLQPLKIPEWKWEEIG 1345 Query: 4588 MDFVTGLPKASDGLDAIWVIVDRLTKSAHFLPIKMTHTVDRLSRLYIAEIVRLHGIPVSI 4767 MDF+TGLP+ S G D+IWV+VDRLTK AHF+P+K T+T ++L+ LY+A +V LHG+P I Sbjct: 1346 MDFITGLPRTSAGHDSIWVVVDRLTKVAHFIPVKTTYTGNKLAELYMARVVCLHGVPKKI 1405 Query: 4768 VSDRDPRFTSQFWKSLQSALGTQLKFSTAFHPQTDGQSERVIQILEDMLRACVLDFGGQW 4947 VSDR +FTS+FW+ LQ +GT+L FSTA+HPQTDGQ+ERV QILEDMLRACVLDFGG W Sbjct: 1406 VSDRGSQFTSKFWQKLQVEMGTRLNFSTAYHPQTDGQTERVNQILEDMLRACVLDFGGSW 1465 Query: 4948 KTHLPLVEFSYNNSFQSSIGMAPFEALYGRPCRSPICWTEVGDTILMGPELVEETTEKIR 5127 +LP EFSYNNS+Q+S+ MAP+EALYGR CR+PI W + G+ + G +++ E EK++ Sbjct: 1466 DKNLPYAEFSYNNSYQASLQMAPYEALYGRKCRTPILWDQTGERQVFGTDILREAEEKVK 1525 Query: 5128 MVQERIKAAQSRQKNYADKRRRPLEFEVGDMVFLKISPKRGISRFGLKGKLKPRYVGPFE 5307 ++QER++ AQSRQK+YAD RRR L FE GD V+L+++P RG+ RF KGKL PR+VGPF+ Sbjct: 1526 IIQERLRVAQSRQKSYADNRRRDLAFEEGDYVYLRVTPLRGVHRFQTKGKLAPRFVGPFK 1585 Query: 5308 ITERVGQVAYRLVLPSQLAQIHNVFHVSMLRKYEPDPSHILDWQSLQLEEDVSYEEGPVQ 5487 I R G+VAY+L LP +A IH+VFHVS L+K P+ D ++L+ED++Y E PV+ Sbjct: 1586 IVSRRGEVAYQLELPPSMAGIHDVFHVSQLKKCLRVPTEEADPDRIELQEDLTYVEKPVR 1645 Query: 5488 IIGRKEKMLRSRVIPLVKV 5544 I+ E+ R+RVI KV Sbjct: 1646 ILEVSERNTRNRVIRFCKV 1664 >emb|CAH66120.1| OSIGBa0146N20.5 [Oryza sativa Indica Group] Length = 1481 Score = 1309 bits (3387), Expect = 0.0 Identities = 674/1404 (48%), Positives = 914/1404 (65%), Gaps = 13/1404 (0%) Frame = +1 Query: 1372 LQNFQRLRPPRFGGSSDPAVVEEWVLRTREILITMQCPRDQWVPVAAFQFDGDASHWWRS 1551 L +F R+RPP F +++P +W+ + L +QC + V A+ Q G A+ WW Sbjct: 63 LADFLRVRPPTFSSTTNPVEAGDWLHAVEKKLDLIQCTEQEKVSFASHQLHGPAAEWWDH 122 Query: 1552 ERNVLGDG-PVEWADFERMFLDRFISETAREIKQQEFSGMVQGNLTVTDYELRFTRLSRY 1728 R G P+ W +F F I +K++EF + QG+ +VT+Y F RL+RY Sbjct: 123 FRQGRAGGEPITWQEFTAAFRKTHIPTGVVALKKREFRALNQGSRSVTEYLHDFNRLARY 182 Query: 1729 ALELIPTDLQKARRFFRGLRPYLRAKMSVIETTNYRDTVSRAQRVEREDMELQTSRRLTS 1908 A E + TD ++ +F GL L + E +++ V +A R E + ++ +R Sbjct: 183 APEDVRTDEERQEKFLEGLNDELSYALMSTEFRDFQQLVDKAIRQEDKYNRMEQKKRRA- 241 Query: 1909 RPQASFPPRADPAKRP-MYSRPSASVPTYSQYQT-----PTPSSYXXXXXXXXXXXXXXL 2070 A F + +RP + + P A P+Y Q + P Y + Sbjct: 242 ---AQFKSQQGSNQRPRLVTGPQA--PSYPQGGSSSVVRPQRQFYNNNTGNRGNDNRNVV 296 Query: 2071 TRQIPRSPASQRLIQ---AGPLTCYGCGEAGHMKRNCP---RLXXXXXXXXXXXXRPQGR 2232 TR +Q + + + P+ C+ CG+ GH CP R+ P+ R Sbjct: 297 TRPAATPVQNQPVRKDQGSKPVICFNCGDPGHYADKCPKPRRVKNAPTSNNSNVPAPKAR 356 Query: 2233 VYALTHEEYQPSHEVMEGNLILSNMQVHVLIDTGSSNSFISTRLASMLELDVENTGKILS 2412 V + E Q + +V+ G ++++ VL D+G+++SF+S AS ++V + G+ L Sbjct: 357 VNHVAAAEAQNAPDVVLGTFPVNSIPATVLFDSGATHSFLSKSFASKHGMEVVSLGRPLL 416 Query: 2413 LSTPLGNNTIPKSVCKNCVIRLVDQELSTDLILLELNDFDVILGMDWLVRNHAHVDCYSR 2592 ++TP GN C + I + + + LILLE D DVILGMDWL R+ +DC +R Sbjct: 417 VNTP-GNQVFSTQYCPSVTIEIEEVPFPSSLILLESKDLDVILGMDWLSRHRGVIDCANR 475 Query: 2593 IVTFKIPGRPILKFMGFKNRIEKYLKSKLNNLTTEEKAVPELVEIPVVRDFRSLFPEELP 2772 VT + F + + +++ L EIP+V+D+ +FPE+LP Sbjct: 476 KVTLTNSNGETVSFFASSPKSPGVVLNQV-----------ALQEIPIVQDYPDVFPEDLP 524 Query: 2773 GLPPIRAIEFSIDLIPGTAPISITPYRMAPAETRELKSQIDELTHLGFIRPSFSPWGAPV 2952 G+PP R IEF IDL+PGT PI PYRMA E E+K Q+D+L G+IRPS SPWGAPV Sbjct: 525 GMPPKRDIEFRIDLVPGTNPIHKRPYRMAANELAEVKKQVDDLLQKGYIRPSTSPWGAPV 584 Query: 2953 LFVKKKDGSFRLCIDYRRLNQVTIKNKYPLPRIEDLFDQLQGAQYFSKIDLRSGYHQLKI 3132 +FV+KKD + R+C+DYR LN+VTIKNKYPLPRI+DLFDQL+GA FSKIDLRSGYHQL+I Sbjct: 585 IFVEKKDHTQRMCVDYRALNEVTIKNKYPLPRIDDLFDQLKGATVFSKIDLRSGYHQLRI 644 Query: 3133 KEDDIPKTAFRTRLGHYEYLVMPFGLTNAPAAFMDLMNRVFWEYLDKFVIVFIDDILIYX 3312 +E+DIPKTAF TR G +E VM FGLTNAPA FM+LMN+VF EYLDKFV+VFIDDILIY Sbjct: 645 REEDIPKTAFTTRYGLFECTVMSFGLTNAPAFFMNLMNKVFMEYLDKFVVVFIDDILIYS 704 Query: 3313 XXXXXXXXXLKITLQTLQDHQLYAKFSKCEFWLKEVKFLGHVVSSKGVSVDPSKIEAVTS 3492 L++ L+ L++HQLYAKFSKCEFWL EVKFLGHV+SS GV+VDPS +E+V + Sbjct: 705 KTKEEHEEHLRLALEKLREHQLYAKFSKCEFWLSEVKFLGHVISSGGVAVDPSNVESVLN 764 Query: 3493 WKQPTSVAEIRSFLGLAGYYRRFVEGFSMIASPLTRLTQKNVKYEWDDRCEAAFQELKTR 3672 WKQP +V+E+RSFLGLAGYYRRF+E FS IA P+TRL QK VKY+W + CE +FQELK R Sbjct: 765 WKQPKTVSEVRSFLGLAGYYRRFIENFSKIARPMTRLLQKEVKYKWTEDCEQSFQELKKR 824 Query: 3673 LTTAPVLIAPVPGESLVIYTDASGIGLGCVLMQNGKVIAYASRKLKTHEKNYPAHDLELA 3852 L TAPVLI P + +Y DAS +GLGCVLMQ GKV+AYASR+L+ HE NYP HDLELA Sbjct: 825 LVTAPVLILPDSRKDFQVYCDASRLGLGCVLMQEGKVVAYASRQLRPHENNYPTHDLELA 884 Query: 3853 SIVFSLKIWRHYLYGEKFELFSDHKSLKYIFSQKELNMRQRRWMEYLKDYDFTLHYHPGK 4032 ++V +LKIWRHYLYG E+++DHKSLKYIF+Q +LNMRQRRW+E +KDYD +HYHPGK Sbjct: 885 AVVHALKIWRHYLYGNHTEIYTDHKSLKYIFTQPDLNMRQRRWLELIKDYDMEIHYHPGK 944 Query: 4033 ANVVADALSRRKESVLAQMMLSEWHMLESVIEFVFDSPKNEDRQHSYLAPLRLHNTLTQR 4212 ANVVADALSR+ +++ W + + F+ ++A L TL + Sbjct: 945 ANVVADALSRKSYCNMSEGRCLPWELCQE-----FEKLNLGIVSKGFVAALEAKPTLFDQ 999 Query: 4213 IVESQNLDADVVEHCLKAGDSENHEWNIHADGSIRFQNRLWIPTDEQLRKDILGEAHRSR 4392 I E+Q D D+ E + + G++ R+ +P +++L+ I+ EAH + Sbjct: 1000 IREAQVNDPDIQEIKKNMRRGKAVGFVEDKQGTVWLGERICVPENKELKDTIMKEAHETL 1059 Query: 4393 YSIHPGGTKMYRDLRKHFWWPGMKKHIAQYVNRCMTCQQVKAEHQRPAGLLQPLPVAEWK 4572 YSIHPG TKMY+DL++ FWW M++ IA+YV C CQ+VKAE Q+PAGLLQP+ + EWK Sbjct: 1060 YSIHPGSTKMYQDLKQQFWWASMRREIAEYVALCDVCQRVKAERQKPAGLLQPMKIPEWK 1119 Query: 4573 WEHVTMDFVTGLPKASDGLDAIWVIVDRLTKSAHFLPIKMTHTVDRLSRLYIAEIVRLHG 4752 WE + MDF+TGLP+ S G D+IWV+VDRLTK AHF+P+K T+T +L+ LY+A +V LHG Sbjct: 1120 WEEIGMDFITGLPRTSAGHDSIWVVVDRLTKVAHFIPVKTTYTGHKLAELYMARVVCLHG 1179 Query: 4753 IPVSIVSDRDPRFTSQFWKSLQSALGTQLKFSTAFHPQTDGQSERVIQILEDMLRACVLD 4932 +P IVSDR +FTS+FW+ LQS LGT+L FSTA+HPQTDGQ+ERV QILEDMLRACVLD Sbjct: 1180 VPKKIVSDRGSQFTSKFWQKLQSELGTRLNFSTAYHPQTDGQTERVNQILEDMLRACVLD 1239 Query: 4933 FGGQWKTHLPLVEFSYNNSFQSSIGMAPFEALYGRPCRSPICWTEVGDTILMGPELVEET 5112 FGG W +LP EFSYNNS+Q+S+ M+P EALYGR CR+P+ W + G+ + G +++ E Sbjct: 1240 FGGSWDKNLPYAEFSYNNSYQASLQMSPNEALYGRKCRTPLLWDQTGERQVFGTDILREA 1299 Query: 5113 TEKIRMVQERIKAAQSRQKNYADKRRRPLEFEVGDMVFLKISPKRGISRFGLKGKLKPRY 5292 EK++++QER++ AQSRQK+YAD RRR L FE GD V+L+++P RG+ RF KGKL PR+ Sbjct: 1300 EEKVKIIQERLRVAQSRQKSYADNRRRDLTFEEGDYVYLRVTPLRGVHRFQTKGKLAPRF 1359 Query: 5293 VGPFEITERVGQVAYRLVLPSQLAQIHNVFHVSMLRKYEPDPSHILDWQSLQLEEDVSYE 5472 VGPF+I R G+VAY+L LP +A IH+VFHVS L+K P+ + ++L+ED++Y Sbjct: 1360 VGPFKIVSRRGEVAYQLELPQSMAGIHDVFHVSQLKKCLRVPTEEANPDCIELQEDLTYV 1419 Query: 5473 EGPVQIIGRKEKMLRSRVIPLVKV 5544 E PV+I+ E+ R+RVI KV Sbjct: 1420 EKPVRILEVSERKTRNRVIRFCKV 1443 >gb|ABA98266.1| retrotransposon protein, putative, Ty3-gypsy subclass [Oryza sativa Japonica Group] Length = 1473 Score = 1306 bits (3381), Expect = 0.0 Identities = 675/1410 (47%), Positives = 925/1410 (65%), Gaps = 19/1410 (1%) Frame = +1 Query: 1372 LQNFQRLRPPRFGGSSDPAVVEEWVLRTREILITMQCPRDQWVPVAAFQFDGDASHWWRS 1551 L F R+RPP F +++P +W+ + L +QC + V A+ Q G AS WW Sbjct: 60 LAEFLRVRPPVFSSTTNPVEASDWLHAIEKKLDLLQCTDQEKVSFASHQLHGPASEWWDH 119 Query: 1552 ER-NVLGDGPVEWADFERMFLDRFISETAREIKQQEFSGMVQGNLTVTDYELRFTRLSRY 1728 R N D P+ W +F F I +K++EF + QG+ +VT+Y F RL+RY Sbjct: 120 FRLNRTTDEPITWLEFTAAFRKTHIPSGVVSLKKKEFRSLTQGSRSVTEYLHEFNRLARY 179 Query: 1729 ALELIPTDLQKARRFFRGLRPYLRAKMSVIETTNYRDTVSRAQRVEREDMELQTSRRLTS 1908 A E + D ++ +F GL L + V + +++ V +A R E + ++ +R + Sbjct: 180 APEDVRNDEERQEKFLGGLNDELSYPLMVGDYPDFQKLVDKAIRQEDKYNRMEQKKRRIA 239 Query: 1909 RPQA----SFPPRADPAKRPMYSRPSASV--PTYSQYQTPTPSSYXXXXXXXXXXXXXXL 2070 + + + PR +PM S+SV P + ++ + Sbjct: 240 QFKTQQGNNQKPRLTLGPQPMSQGGSSSVVRPQRQFFNNNAGNN---------------I 284 Query: 2071 TRQIPR---SPASQRLIQAG----PLTCYGCGEAGHMKRNCP---RLXXXXXXXXXXXXR 2220 Q PR +PA Q+ + P+ C+ CG+ GH CP R+ Sbjct: 285 RNQAPRPVAAPAQQQPAKREQGNKPVVCFNCGDPGHYADKCPKPRRVKVVPTQNNSAVPA 344 Query: 2221 PQGRVYALTHEEYQPSHEVMEGNLILSNMQVHVLIDTGSSNSFISTRLASMLELDVENTG 2400 + RV + E Q + +V+ G +++++ VL D+G+++SF+S A ++VE+ Sbjct: 345 SKARVNHVAAAEAQDAPDVILGTFLVNSVPATVLFDSGATHSFLSMSFAGNHGMEVEDLR 404 Query: 2401 KILSLSTPLGNNTIPKSVCKNCVIRLVDQELSTDLILLELNDFDVILGMDWLVRNHAHVD 2580 + L +STP N + + I + +LILL+ D DVILGMDWL R+ +D Sbjct: 405 RPLMVSTP-SNQALSLQRSPSVRIEIQGVPFLANLILLKSKDLDVILGMDWLARHKGVID 463 Query: 2581 CYSRIVTFKIPGRPILKFMGFKNRIEKYLKSKLNNLTTEEKAVPELVEIPVVRDFRSLFP 2760 C ++ VT ++ + + L+S+LN +T EE IP+VR++ +FP Sbjct: 464 CANKKVTLNSYDGRVVTVHALSS---ESLRSRLNQITLEE--------IPIVREYPDVFP 512 Query: 2761 EELPGLPPIRAIEFSIDLIPGTAPISITPYRMAPAETRELKSQIDELTHLGFIRPSFSPW 2940 ++LPG+PP R IEF IDL+PGT PI PYRMA E E+K Q+D+L G+IRPS SPW Sbjct: 513 DDLPGMPPKRDIEFRIDLVPGTTPIHKRPYRMAANELAEVKRQVDDLLQKGYIRPSSSPW 572 Query: 2941 GAPVLFVKKKDGSFRLCIDYRRLNQVTIKNKYPLPRIEDLFDQLQGAQYFSKIDLRSGYH 3120 GAPV+FV+KKD + R+C+DYR LN VTIKNKYPLPRI+DLFDQL+GA FSKIDLRSGYH Sbjct: 573 GAPVIFVEKKDHTQRMCVDYRALNDVTIKNKYPLPRIDDLFDQLKGATVFSKIDLRSGYH 632 Query: 3121 QLKIKEDDIPKTAFRTRLGHYEYLVMPFGLTNAPAAFMDLMNRVFWEYLDKFVIVFIDDI 3300 QL+IKE+DIPKTAF TR G +E VM FGLTNAPA FM+LMN+VF EYLDKFV+VFIDDI Sbjct: 633 QLRIKEEDIPKTAFTTRYGLFECTVMSFGLTNAPAFFMNLMNKVFMEYLDKFVVVFIDDI 692 Query: 3301 LIYXXXXXXXXXXLKITLQTLQDHQLYAKFSKCEFWLKEVKFLGHVVSSKGVSVDPSKIE 3480 LIY L++ L+ L++HQLYAKFSKCEFWL EVKFLGHV+S+ GV+VDPS +E Sbjct: 693 LIYSRTKEEHEEHLRLALEKLREHQLYAKFSKCEFWLSEVKFLGHVISAGGVAVDPSNVE 752 Query: 3481 AVTSWKQPTSVAEIRSFLGLAGYYRRFVEGFSMIASPLTRLTQKNVKYEWDDRCEAAFQE 3660 +VT+WKQP +V+EIRSFLGLAGYYRRF+E FS IA P+TRL QK+VKY+W + CE +FQE Sbjct: 753 SVTNWKQPKTVSEIRSFLGLAGYYRRFIENFSKIAKPMTRLLQKDVKYKWSEECERSFQE 812 Query: 3661 LKTRLTTAPVLIAPVPGESLVIYTDASGIGLGCVLMQNGKVIAYASRKLKTHEKNYPAHD 3840 LK+RL +AP+LI P P + +Y DAS +GLGCVLMQ+GKV+AYASR+L+ HEKNYP HD Sbjct: 813 LKSRLISAPILILPDPKKGFQVYCDASKLGLGCVLMQDGKVVAYASRQLRPHEKNYPTHD 872 Query: 3841 LELASIVFSLKIWRHYLYGEKFELFSDHKSLKYIFSQKELNMRQRRWMEYLKDYDFTLHY 4020 +ELA++V +LKIWRHYL+G + E+++DHKSLKYIF+Q +LNMRQRRW+E +KDYD +HY Sbjct: 873 IELAAVVHALKIWRHYLFGTRTEVYTDHKSLKYIFTQPDLNMRQRRWLELIKDYDMGIHY 932 Query: 4021 HPGKANVVADALSRRKESVLAQMMLSEWHMLESVIEFVFDSPKNEDRQHSYLAPLRLHNT 4200 HPGKANVVADALSR+ +E L + F+ ++A L T Sbjct: 933 HPGKANVVADALSRK-----GYCNATEGRQLPLELCKEFERLNLGIVGRGFVAALEAKPT 987 Query: 4201 LTQRIVESQNLDADV--VEHCLKAGDSENHEWNIHADGSIRFQNRLWIPTDEQLRKDILG 4374 L ++ E+Q D D+ ++ ++ G + + H G++ R+ +P ++ L+ IL Sbjct: 988 LIDQVREAQINDPDIQKIKKNMRRGKAIGFLEDEH--GTVWLGERICVPDNKDLKDAILK 1045 Query: 4375 EAHRSRYSIHPGGTKMYRDLRKHFWWPGMKKHIAQYVNRCMTCQQVKAEHQRPAGLLQPL 4554 EAH + YSIHPG TKMY+DL++ FWW MK+ IA+YV C CQ+VKAEHQ+PAGLLQPL Sbjct: 1046 EAHDTLYSIHPGSTKMYQDLKERFWWASMKREIAEYVAVCDVCQRVKAEHQKPAGLLQPL 1105 Query: 4555 PVAEWKWEHVTMDFVTGLPKASDGLDAIWVIVDRLTKSAHFLPIKMTHTVDRLSRLYIAE 4734 + EWKWE + MDF+TGLP+ S G D+IWVIVDRLTK AHF+P+K T++ RL+ LY+A Sbjct: 1106 KIPEWKWEEIGMDFITGLPRTSSGHDSIWVIVDRLTKVAHFIPVKTTYSGSRLAELYMAR 1165 Query: 4735 IVRLHGIPVSIVSDRDPRFTSQFWKSLQSALGTQLKFSTAFHPQTDGQSERVIQILEDML 4914 IV LHG+P IVSDR +FTS FWK LQ +G++L FSTA+HPQTDGQ+ERV QILEDML Sbjct: 1166 IVCLHGVPKKIVSDRGSQFTSNFWKKLQEEMGSKLNFSTAYHPQTDGQTERVNQILEDML 1225 Query: 4915 RACVLDFGGQWKTHLPLVEFSYNNSFQSSIGMAPFEALYGRPCRSPICWTEVGDTILMGP 5094 RAC LDFGG W +LP EFSYNNS+Q+S+ MAP+EALYGR CR+P+ W + G+ + G Sbjct: 1226 RACALDFGGSWDKNLPYAEFSYNNSYQASLQMAPYEALYGRKCRTPLLWDQTGERQVFGT 1285 Query: 5095 ELVEETTEKIRMVQERIKAAQSRQKNYADKRRRPLEFEVGDMVFLKISPKRGISRFGLKG 5274 +++ E EK++++QER++ AQSR K+YAD RRR L FE GD V+L+++P RG+ RF KG Sbjct: 1286 DILREAEEKVKIIQERLRVAQSRHKSYADNRRRDLSFEEGDYVYLRVTPFRGVHRFRTKG 1345 Query: 5275 KLKPRYVGPFEITERVGQVAYRLVLPSQLAQIHNVFHVSMLRKYEPDPSHILDWQSLQLE 5454 KL PR+VGP++I R G+VAY+L LP LA +HNVFHVS L+K P+ + + ++++ Sbjct: 1346 KLAPRFVGPYKIVSRRGEVAYQLELPQSLAGVHNVFHVSQLKKCLRVPTEEANIEQIEVQ 1405 Query: 5455 EDVSYEEGPVQIIGRKEKMLRSRVIPLVKV 5544 ED++Y E P++I+ E+ R+RVI KV Sbjct: 1406 EDLTYVEKPIRILETSERRTRNRVIRFCKV 1435 >gb|AAL78097.1|AC093568_7 Putative polyprotein [Oryza sativa] gi|31430586|gb|AAP52480.1| retrotransposon protein, putative, Ty3-gypsy subclass [Oryza sativa Japonica Group] Length = 1473 Score = 1306 bits (3380), Expect = 0.0 Identities = 675/1404 (48%), Positives = 916/1404 (65%), Gaps = 13/1404 (0%) Frame = +1 Query: 1372 LQNFQRLRPPRFGGSSDPAVVEEWVLRTREILITMQCPRDQWVPVAAFQFDGDASHWWRS 1551 L F R+RPP F +++P +W+ + L +QC + V A+ Q G AS WW Sbjct: 60 LAEFLRVRPPVFSSTTNPVEAGDWLHAIEKKLDLLQCTNQEKVSFASHQLHGPASEWWDH 119 Query: 1552 ER-NVLGDGPVEWADFERMFLDRFISETAREIKQQEFSGMVQGNLTVTDYELRFTRLSRY 1728 R N + P+ W +F F I +K++EF + QG+ +VT+Y F RL+RY Sbjct: 120 FRLNRITAEPITWLEFTAAFRKTHIPSGVVSLKKKEFRSLTQGSRSVTEYLHEFNRLARY 179 Query: 1729 ALELIPTDLQKARRFFRGLRPYLRAKMSVIETTNYRDTVSRAQRVEREDMELQTSRRLTS 1908 A E + D ++ +F GL L + V + +++ V +A R E + ++ +R Sbjct: 180 APEDVRNDEERQEKFLGGLNDELSYPLMVGDYPDFQKLVDKAIRQEDKYNRMEQKKRRI- 238 Query: 1909 RPQASFPPRADPAKRPMYSRPSASVPTYSQYQTPTPSSYXXXXXXXXXXXXXXLTRQIPR 2088 A F + ++P + +P Q + S + Q PR Sbjct: 239 ---AQFKTQQGNNQKPRLTLGPQPMP-----QGGSSSVVRPQRQFFNNNAGNNIRNQAPR 290 Query: 2089 ---SPASQRLIQ----AGPLTCYGCGEAGHMKRNCP---RLXXXXXXXXXXXXRPQGRVY 2238 +PA Q+ + + P+ C+ CG+ GH CP R+ + RV Sbjct: 291 PVAAPAQQQPAKREQGSKPVVCFNCGDPGHYADKCPKPRRVKVVPVQNNSAVPASKARVN 350 Query: 2239 ALTHEEYQPSHEVMEGNLILSNMQVHVLIDTGSSNSFISTRLASMLELDVENTGKILSLS 2418 + E Q + +V+ G +++++ VL D+G+++SF+S A ++VE+ + L +S Sbjct: 351 HVAAAEAQDAPDVILGTFLVNSVPATVLFDSGATHSFLSMSFAGNHGMEVEDLRRPLMVS 410 Query: 2419 TPLGNNTIPKSVCKNCVIRLVDQELSTDLILLELNDFDVILGMDWLVRNHAHVDCYSRIV 2598 TP N + + I + +LILLE D DVILGMDWL R+ +DC +R V Sbjct: 411 TP-SNQALSLQRSPSVRIEIKGVPFLANLILLESKDLDVILGMDWLARHKGVIDCANRKV 469 Query: 2599 TFKIPGRPILKFMGFKNRIEKYLKSKLNNLTTEEKAVPELVEIPVVRDFRSLFPEELPGL 2778 T ++ + + L+S+LN +T EE IP+VR++ +FP++LPG+ Sbjct: 470 TLNSYDGRVVTVHALSS---ESLRSRLNQVTLEE--------IPIVREYPDVFPDDLPGM 518 Query: 2779 PPIRAIEFSIDLIPGTAPISITPYRMAPAETRELKSQIDELTHLGFIRPSFSPWGAPVLF 2958 PP R IEF IDL+PGT PI PYRMA E E+K Q+D+L G+IRPS SPWGAPV+F Sbjct: 519 PPKRDIEFRIDLVPGTTPIHKRPYRMAANELAEVKRQVDDLLQKGYIRPSSSPWGAPVIF 578 Query: 2959 VKKKDGSFRLCIDYRRLNQVTIKNKYPLPRIEDLFDQLQGAQYFSKIDLRSGYHQLKIKE 3138 V+KKD + R+C+DYR LN VTIKNKYPLPRI+DLFDQL+GA FSKIDLRSGYHQL+IKE Sbjct: 579 VEKKDHTQRMCVDYRALNDVTIKNKYPLPRIDDLFDQLKGATVFSKIDLRSGYHQLRIKE 638 Query: 3139 DDIPKTAFRTRLGHYEYLVMPFGLTNAPAAFMDLMNRVFWEYLDKFVIVFIDDILIYXXX 3318 +DIPKTAF TR G +E VM FGLTNAPA FM+LMN+VF EYLDKFV+VFIDDILIY Sbjct: 639 EDIPKTAFITRYGLFECTVMSFGLTNAPAFFMNLMNKVFMEYLDKFVVVFIDDILIYSRT 698 Query: 3319 XXXXXXXLKITLQTLQDHQLYAKFSKCEFWLKEVKFLGHVVSSKGVSVDPSKIEAVTSWK 3498 L++ L+ L++HQLYAKFSKCEFWL EVKFLGHV+S+ GV+VDPS +E+VT+WK Sbjct: 699 KEEHEEHLRLALEKLREHQLYAKFSKCEFWLSEVKFLGHVISAGGVAVDPSNVESVTNWK 758 Query: 3499 QPTSVAEIRSFLGLAGYYRRFVEGFSMIASPLTRLTQKNVKYEWDDRCEAAFQELKTRLT 3678 QP +V+EIRSFLGLAGYYRRF+E FS IA P+TRL QK+VKY+W + CE +FQELK RL Sbjct: 759 QPKTVSEIRSFLGLAGYYRRFIENFSKIAKPMTRLLQKDVKYKWSEECEQSFQELKNRLV 818 Query: 3679 TAPVLIAPVPGESLVIYTDASGIGLGCVLMQNGKVIAYASRKLKTHEKNYPAHDLELASI 3858 +AP+LI P P + +Y DAS +GLGCVLMQ+GKV+AYASR+L+ HEKNYP HDL+LA++ Sbjct: 819 SAPILILPDPKKGFQVYCDASKLGLGCVLMQDGKVVAYASRQLRPHEKNYPTHDLKLAAV 878 Query: 3859 VFSLKIWRHYLYGEKFELFSDHKSLKYIFSQKELNMRQRRWMEYLKDYDFTLHYHPGKAN 4038 V +LKIWRHYL+G + E+++DHKSLKYIF+Q +LNMRQRRW+E +KDYD +HYHPGKAN Sbjct: 879 VHALKIWRHYLFGTRTEVYTDHKSLKYIFTQPDLNMRQRRWLELIKDYDMGIHYHPGKAN 938 Query: 4039 VVADALSRRKESVLAQMMLSEWHMLESVIEFVFDSPKNEDRQHSYLAPLRLHNTLTQRIV 4218 VVADALSR+ +E L + F+ ++A L TL ++ Sbjct: 939 VVADALSRK-----GYCNATEGRQLPLELCKEFERLNLGIVSRGFVAALEAKPTLIDQVR 993 Query: 4219 ESQNLDADVVEHCLKAGDSENHEWNIHAD--GSIRFQNRLWIPTDEQLRKDILGEAHRSR 4392 E+Q D D+ E +K D G++ R+ +P ++ L+ IL EAH + Sbjct: 994 EAQINDPDIQE--IKKNRRRGKAIGFLEDEHGTVWLGERICVPDNKDLKDAILKEAHDTL 1051 Query: 4393 YSIHPGGTKMYRDLRKHFWWPGMKKHIAQYVNRCMTCQQVKAEHQRPAGLLQPLPVAEWK 4572 YSIHPG TKMY+DL+K FWW MK+ IA+YV C CQ+VKAEHQ+PAGLLQPL + EWK Sbjct: 1052 YSIHPGSTKMYQDLKKRFWWASMKREIAEYVAVCDVCQRVKAEHQKPAGLLQPLKIPEWK 1111 Query: 4573 WEHVTMDFVTGLPKASDGLDAIWVIVDRLTKSAHFLPIKMTHTVDRLSRLYIAEIVRLHG 4752 WE + MDF+TGLP+ S G D+IWVIVDRLTK AHF+P+K T++ RL+ LY+A IV LHG Sbjct: 1112 WEEIGMDFITGLPRTSSGHDSIWVIVDRLTKVAHFIPVKTTYSGSRLAELYMARIVCLHG 1171 Query: 4753 IPVSIVSDRDPRFTSQFWKSLQSALGTQLKFSTAFHPQTDGQSERVIQILEDMLRACVLD 4932 +P IVSDR +FTS FWK LQ +G++L FSTA+HPQTDGQ+ERV QILEDMLRAC LD Sbjct: 1172 VPKKIVSDRGSQFTSNFWKKLQEEMGSKLNFSTAYHPQTDGQTERVNQILEDMLRACALD 1231 Query: 4933 FGGQWKTHLPLVEFSYNNSFQSSIGMAPFEALYGRPCRSPICWTEVGDTILMGPELVEET 5112 FGG W +LP EFSYNNS+Q+S+ MAP+EALYGR CR+P+ W + G+ + G +++ E Sbjct: 1232 FGGSWDKNLPYAEFSYNNSYQASLQMAPYEALYGRKCRTPLLWDQTGERQVFGTDILREA 1291 Query: 5113 TEKIRMVQERIKAAQSRQKNYADKRRRPLEFEVGDMVFLKISPKRGISRFGLKGKLKPRY 5292 EK++++QER++ AQSR K+YAD RRR L FE GD V+L+++P RG+ RF KGKL PR+ Sbjct: 1292 EEKVKIIQERLRVAQSRHKSYADNRRRDLSFEEGDYVYLRVTPLRGVHRFQTKGKLAPRF 1351 Query: 5293 VGPFEITERVGQVAYRLVLPSQLAQIHNVFHVSMLRKYEPDPSHILDWQSLQLEEDVSYE 5472 VGP++I R G+VAY+L LP LA +H+VFHVS L+K P+ + + ++++ED++Y Sbjct: 1352 VGPYKIVSRRGEVAYQLELPQSLAGVHDVFHVSQLKKCLRVPTEEANIEQIEVQEDLTYV 1411 Query: 5473 EGPVQIIGRKEKMLRSRVIPLVKV 5544 E P++I+ E+ R+RVI KV Sbjct: 1412 EKPIRILETSERRTRNRVIRFCKV 1435 >emb|CAD40208.2| OSJNBa0019J05.6 [Oryza sativa Japonica Group] Length = 1616 Score = 1305 bits (3376), Expect = 0.0 Identities = 672/1402 (47%), Positives = 914/1402 (65%), Gaps = 11/1402 (0%) Frame = +1 Query: 1372 LQNFQRLRPPRFGGSSDPAVVEEWVLRTREILITMQCPRDQWVPVAAFQFDGDASHWWRS 1551 L F R+RPP F +++P +W+ + L +QC + V + Q G AS WW Sbjct: 203 LAEFLRVRPPVFSSTTNPVEASDWLHAIEKKLDLLQCTDQEKVSFVSHQLHGPASEWWDH 262 Query: 1552 ER-NVLGDGPVEWADFERMFLDRFISETAREIKQQEFSGMVQGNLTVTDYELRFTRLSRY 1728 R N P+ W +F F I +K++EF + QG+ +VT+Y F RL+RY Sbjct: 263 FRLNRTTAEPITWLEFTAAFRKTHIPLGVVSLKKKEFRSLTQGSRSVTEYLHEFNRLARY 322 Query: 1729 ALELIPTDLQKARRFFRGLRPYLRAKMSVIETTNYRDTVSRAQRVEREDMELQTSRRLTS 1908 A E + D ++ +F GL L + V + +++ V +A R E + ++ +R Sbjct: 323 APEDVRNDEERQEKFLGGLNDELSYPLMVGDHPDFQKLVDKAIRQEDKYNRMEQKKRRI- 381 Query: 1909 RPQASFPPRADPAKRPMYSRPSASVPTYSQYQTPTPSSYXXXXXXXXXXXXXXLTRQIPR 2088 A F + ++P + S+P Q + S + Q PR Sbjct: 382 ---AQFKTQQGNNQKPRLTLGPQSMP-----QGGSSSVVRPQRQFFNNNAGNNIRNQAPR 433 Query: 2089 ---SPASQRLIQAG----PLTCYGCGEAGHMKRNCP---RLXXXXXXXXXXXXRPQGRVY 2238 +PA Q+ + P+ C+ CG+ GH CP R+ + RV Sbjct: 434 PVAAPAQQQPAKREQGNKPVVCFNCGDPGHYADKCPKPRRVKVVPAQNNSAVPASKARVN 493 Query: 2239 ALTHEEYQPSHEVMEGNLILSNMQVHVLIDTGSSNSFISTRLASMLELDVENTGKILSLS 2418 + E Q + +V+ G +++++ VL D+G+++SF+S A E++VE+ + L +S Sbjct: 494 HVAAAEAQDAPDVILGTFLVNSVPATVLFDSGATHSFLSMSFAGNHEMEVEDLRRPLMVS 553 Query: 2419 TPLGNNTIPKSVCKNCVIRLVDQELSTDLILLELNDFDVILGMDWLVRNHAHVDCYSRIV 2598 TP N + + I + +LILL+ D DVILGMDWL R+ +DC +R V Sbjct: 554 TP-SNQALSLQRSPSVKIEIQGVPFLANLILLKSKDLDVILGMDWLARHKGVIDCANRKV 612 Query: 2599 TFKIPGRPILKFMGFKNRIEKYLKSKLNNLTTEEKAVPELVEIPVVRDFRSLFPEELPGL 2778 T ++ + + L+S+LN +T EE IP+VR++ +FP++LPG+ Sbjct: 613 TLNSYDGRVVTVHALSS---ESLRSRLNQITLEE--------IPIVREYPDVFPDDLPGM 661 Query: 2779 PPIRAIEFSIDLIPGTAPISITPYRMAPAETRELKSQIDELTHLGFIRPSFSPWGAPVLF 2958 PP R IEF IDL+PGT PI PYRMA E E+K Q+D+L G+IRPS SPWGAPV+F Sbjct: 662 PPKRDIEFRIDLVPGTTPIHKRPYRMAANELAEVKRQVDDLLQKGYIRPSSSPWGAPVIF 721 Query: 2959 VKKKDGSFRLCIDYRRLNQVTIKNKYPLPRIEDLFDQLQGAQYFSKIDLRSGYHQLKIKE 3138 V+KKD + R+C+DYR LN VTIKNKYPLPRI+DLFDQL+GA FSKIDLRSGYHQL+IKE Sbjct: 722 VEKKDHTQRMCVDYRALNDVTIKNKYPLPRIDDLFDQLKGATVFSKIDLRSGYHQLRIKE 781 Query: 3139 DDIPKTAFRTRLGHYEYLVMPFGLTNAPAAFMDLMNRVFWEYLDKFVIVFIDDILIYXXX 3318 +DIPKTAF TR G ++ VM FGLTNAPA FM+LMN+VF EYLDKFV+VFIDDILIY Sbjct: 782 EDIPKTAFTTRYGLFKCTVMSFGLTNAPAFFMNLMNKVFMEYLDKFVVVFIDDILIYSRT 841 Query: 3319 XXXXXXXLKITLQTLQDHQLYAKFSKCEFWLKEVKFLGHVVSSKGVSVDPSKIEAVTSWK 3498 L++ L+ L++HQLYAKFSKCEFWL EVKFLGHV+S+ GV+VDPS +E+VT+WK Sbjct: 842 KEEHEEHLRLALEKLREHQLYAKFSKCEFWLSEVKFLGHVISAGGVAVDPSNVESVTNWK 901 Query: 3499 QPTSVAEIRSFLGLAGYYRRFVEGFSMIASPLTRLTQKNVKYEWDDRCEAAFQELKTRLT 3678 QP +V+EIRSFLGLAGYYRRF+E FS IA P+TRL QK+VKY+W + CE +FQELK+RL Sbjct: 902 QPKTVSEIRSFLGLAGYYRRFIENFSKIAKPMTRLLQKDVKYKWSEECEQSFQELKSRLI 961 Query: 3679 TAPVLIAPVPGESLVIYTDASGIGLGCVLMQNGKVIAYASRKLKTHEKNYPAHDLELASI 3858 +AP+LI P P + +Y D S +GLGCVLMQ+GKV+AYASR+L+ HEKNYP HD+ELA++ Sbjct: 962 SAPILILPDPKKGFQVYCDVSKLGLGCVLMQDGKVVAYASRQLRPHEKNYPTHDIELAAV 1021 Query: 3859 VFSLKIWRHYLYGEKFELFSDHKSLKYIFSQKELNMRQRRWMEYLKDYDFTLHYHPGKAN 4038 V +LKIWRHYL+G + E+++DHKSLKYIF+Q +LNMRQRRW+E +KDYD +HYHPGKAN Sbjct: 1022 VHALKIWRHYLFGTRTEVYTDHKSLKYIFTQPDLNMRQRRWLELIKDYDMGIHYHPGKAN 1081 Query: 4039 VVADALSRRKESVLAQMMLSEWHMLESVIEFVFDSPKNEDRQHSYLAPLRLHNTLTQRIV 4218 VVADALSR+ +E L + F+ ++A L TL ++ Sbjct: 1082 VVADALSRK-----GYCNATEGRQLPLELCKEFERLNLGIVGRGFVAALEAKPTLIDQVR 1136 Query: 4219 ESQNLDADVVEHCLKAGDSENHEWNIHADGSIRFQNRLWIPTDEQLRKDILGEAHRSRYS 4398 E+Q D D+ E + + G++ R+ +P ++ L+ IL EAH + YS Sbjct: 1137 EAQINDPDIQEIKKNMRRGKAIGFLEDEQGTVWLGKRICVPDNKDLKDAILKEAHDTLYS 1196 Query: 4399 IHPGGTKMYRDLRKHFWWPGMKKHIAQYVNRCMTCQQVKAEHQRPAGLLQPLPVAEWKWE 4578 IHPG TKMY+DLR+ FWW MK+ IA+YV C CQ+VKAEHQ+PAGLLQPL + EWKWE Sbjct: 1197 IHPGSTKMYQDLRERFWWASMKREIAEYVAVCDVCQRVKAEHQKPAGLLQPLKIPEWKWE 1256 Query: 4579 HVTMDFVTGLPKASDGLDAIWVIVDRLTKSAHFLPIKMTHTVDRLSRLYIAEIVRLHGIP 4758 + MDF+TGLP+ S G D+IWVIVDRLTK AHF+P+K T++ RL+ LY+A IV LHG+P Sbjct: 1257 EIGMDFITGLPRTSSGHDSIWVIVDRLTKVAHFIPVKTTYSGSRLAELYMARIVCLHGVP 1316 Query: 4759 VSIVSDRDPRFTSQFWKSLQSALGTQLKFSTAFHPQTDGQSERVIQILEDMLRACVLDFG 4938 IVSDR +FTS FWK LQ +G++L FSTA+HPQTDGQ+ERV QILEDMLRAC LDFG Sbjct: 1317 KKIVSDRGSQFTSNFWKKLQEEMGSKLNFSTAYHPQTDGQTERVNQILEDMLRACALDFG 1376 Query: 4939 GQWKTHLPLVEFSYNNSFQSSIGMAPFEALYGRPCRSPICWTEVGDTILMGPELVEETTE 5118 G W +LP EFSYNNS+Q+S+ MAP+EALYGR CR+P+ W + G+ + G +++ E E Sbjct: 1377 GSWDKNLPYAEFSYNNSYQASLQMAPYEALYGRKCRTPLLWDQTGERQVFGTDILREAEE 1436 Query: 5119 KIRMVQERIKAAQSRQKNYADKRRRPLEFEVGDMVFLKISPKRGISRFGLKGKLKPRYVG 5298 K++++QER++ AQSR K+YAD RRR L FE GD V+L+++P RG+ RF KGKL PR+VG Sbjct: 1437 KVKVIQERLRVAQSRHKSYADNRRRDLSFEEGDYVYLRVTPLRGVHRFHTKGKLAPRFVG 1496 Query: 5299 PFEITERVGQVAYRLVLPSQLAQIHNVFHVSMLRKYEPDPSHILDWQSLQLEEDVSYEEG 5478 P++I R G+VAY+L LP LA +HNVFHVS L+K P+ + + ++++ED++Y E Sbjct: 1497 PYKIASRRGEVAYQLELPQSLAGVHNVFHVSQLKKCLRVPTEEANIEQIEVQEDLTYVEK 1556 Query: 5479 PVQIIGRKEKMLRSRVIPLVKV 5544 P++I+ E+ R+RVI KV Sbjct: 1557 PIRILETNERRTRNRVIRFCKV 1578 >emb|CAH66289.1| OSIGBa0161P06.6 [Oryza sativa Indica Group] Length = 1433 Score = 1303 bits (3373), Expect = 0.0 Identities = 669/1386 (48%), Positives = 905/1386 (65%), Gaps = 12/1386 (0%) Frame = +1 Query: 1372 LQNFQRLRPPRFGGSSDPAVVEEWVLRTREILITMQCPRDQWVPVAAFQFDGDASHWWRS 1551 L +F R+RPP F +++P +W+ + L +QC + V A+ Q G A+ WW Sbjct: 63 LADFLRVRPPTFSSTTNPVEAGDWLHAVEKKLDLIQCTEQEKVSFASHQLHGPAAEWWDH 122 Query: 1552 ERNVLGDG-PVEWADFERMFLDRFISETAREIKQQEFSGMVQGNLTVTDYELRFTRLSRY 1728 R G P+ W +F F I +K++EF + QG+ +VT+Y F RL+RY Sbjct: 123 FRQGRAGGEPITWQEFTAAFRKTHIPTGVVALKKREFRALNQGSRSVTEYLHDFNRLARY 182 Query: 1729 ALELIPTDLQKARRFFRGLRPYLRAKMSVIETTNYRDTVSRAQRVEREDMELQTSRRLTS 1908 A E + TD ++ +F GL L + E +++ V +A R E + ++ +R Sbjct: 183 APEDVRTDEERQEKFLEGLNDELSYTLMSTEFRDFQQLVDKAIRQEDKYNRMEQKKRRA- 241 Query: 1909 RPQASFPPRADPAKRPMYSRPSASVPTYSQYQT-----PTPSSYXXXXXXXXXXXXXXLT 2073 A F + +RP VP+YSQ + P Y + Sbjct: 242 ---AQFKSQQGSNQRPRLVT-GPQVPSYSQGGSSSVVRPQRQFYNNNTGNRGNDNRNVVA 297 Query: 2074 RQIPRSPASQRLIQ---AGPLTCYGCGEAGHMKRNCP---RLXXXXXXXXXXXXRPQGRV 2235 R S +Q + + + P+ C+ CG+ GH CP R+ P+ RV Sbjct: 298 RPAATSVQNQPVRKDQGSKPVICFNCGDPGHYADKCPKPRRVKNAPVPNNSNVPAPKARV 357 Query: 2236 YALTHEEYQPSHEVMEGNLILSNMQVHVLIDTGSSNSFISTRLASMLELDVENTGKILSL 2415 + E Q + +V+ G ++++ VL D+G+++SF+S AS ++V + G+ L + Sbjct: 358 NHVAAAEAQNAPDVVLGTFPVNSIPATVLFDSGATHSFLSKSFASKHGMEVVSLGRPLLV 417 Query: 2416 STPLGNNTIPKSVCKNCVIRLVDQELSTDLILLELNDFDVILGMDWLVRNHAHVDCYSRI 2595 ++P GN C + I + + + LILLE D DVILGMDWL R+ +DC +R Sbjct: 418 NSP-GNQAFSTQYCPSVTIEIEEVPFPSSLILLESKDLDVILGMDWLSRHRGVIDCANRK 476 Query: 2596 VTFKIPGRPILKFMGFKNRIEKYLKSKLNNLTTEEKAVPELVEIPVVRDFRSLFPEELPG 2775 VT + F + + +++ L EIP+V+D+ +FPE+LPG Sbjct: 477 VTLTNSNGETVSFFASSPKSHGVVLNQV-----------ALQEIPIVQDYPDVFPEDLPG 525 Query: 2776 LPPIRAIEFSIDLIPGTAPISITPYRMAPAETRELKSQIDELTHLGFIRPSFSPWGAPVL 2955 +PP R IEF IDL+PGT PI PYRMA E E+K Q+D+L G+IRPS SPWGAPV+ Sbjct: 526 MPPKRDIEFRIDLVPGTNPIHKRPYRMAANELAEVKKQVDDLLQKGYIRPSTSPWGAPVI 585 Query: 2956 FVKKKDGSFRLCIDYRRLNQVTIKNKYPLPRIEDLFDQLQGAQYFSKIDLRSGYHQLKIK 3135 FV+KKD + R+C+DYR LN+VTIKNKYPLPRI+DLFDQL+GA FSKIDLRSGYHQL+I+ Sbjct: 586 FVEKKDHTQRMCVDYRALNEVTIKNKYPLPRIDDLFDQLKGATVFSKIDLRSGYHQLRIR 645 Query: 3136 EDDIPKTAFRTRLGHYEYLVMPFGLTNAPAAFMDLMNRVFWEYLDKFVIVFIDDILIYXX 3315 E+DIPKTAF TR G +E +VM FGLTNAPA FM+LMN+VF EYLDKFV+VFIDDILIY Sbjct: 646 EEDIPKTAFTTRYGLFECIVMSFGLTNAPAFFMNLMNKVFMEYLDKFVVVFIDDILIYSK 705 Query: 3316 XXXXXXXXLKITLQTLQDHQLYAKFSKCEFWLKEVKFLGHVVSSKGVSVDPSKIEAVTSW 3495 L++ L+ L++HQLYAKFSKCEFWL EVKFLGHV+SS GV+VDPS +E+V SW Sbjct: 706 TKEEHEEHLRLALEKLREHQLYAKFSKCEFWLSEVKFLGHVISSGGVAVDPSNVESVLSW 765 Query: 3496 KQPTSVAEIRSFLGLAGYYRRFVEGFSMIASPLTRLTQKNVKYEWDDRCEAAFQELKTRL 3675 KQP +V+E+RSFLGLAGYYRRF+E FS IA P+TRL QK+VKY+W + CE +FQELK RL Sbjct: 766 KQPKTVSEVRSFLGLAGYYRRFIENFSKIARPMTRLLQKDVKYKWTEDCERSFQELKKRL 825 Query: 3676 TTAPVLIAPVPGESLVIYTDASGIGLGCVLMQNGKVIAYASRKLKTHEKNYPAHDLELAS 3855 TAPVLI P + +Y DAS GLGCVLMQ GKV+AYASR+L+ HE NYP HDLELA+ Sbjct: 826 VTAPVLILPDSRKDFQVYCDASRHGLGCVLMQEGKVVAYASRQLRPHENNYPTHDLELAA 885 Query: 3856 IVFSLKIWRHYLYGEKFELFSDHKSLKYIFSQKELNMRQRRWMEYLKDYDFTLHYHPGKA 4035 +V +LKIWRHYLYG E+++DHKSLKYIF+Q +LNMRQRRW+E +KDYD +HYHPGKA Sbjct: 886 VVHALKIWRHYLYGNHTEIYTDHKSLKYIFTQPDLNMRQRRWLELIKDYDMEIHYHPGKA 945 Query: 4036 NVVADALSRRKESVLAQMMLSEWHMLESVIEFVFDSPKNEDRQHSYLAPLRLHNTLTQRI 4215 NVVADALSR+ +++ W + + F+ ++A L TL +I Sbjct: 946 NVVADALSRKSYCNMSEGRCLPWELCQE-----FEKLNLGIVSKGFVAALEAKPTLFDQI 1000 Query: 4216 VESQNLDADVVEHCLKAGDSENHEWNIHADGSIRFQNRLWIPTDEQLRKDILGEAHRSRY 4395 E+Q D D+ E + + G++ R+ +P +++L+ I+ EAH + Y Sbjct: 1001 REAQVNDPDIQEIKKNMRRGKAAGFVEDEQGTVWLGERICVPENKELKDTIMKEAHGTLY 1060 Query: 4396 SIHPGGTKMYRDLRKHFWWPGMKKHIAQYVNRCMTCQQVKAEHQRPAGLLQPLPVAEWKW 4575 SIHPG TKMY+DL++ FWW M++ IA+YV C CQ+VKAEHQ+PAGLLQPL + EWKW Sbjct: 1061 SIHPGSTKMYQDLKQQFWWASMRREIAEYVALCDVCQRVKAEHQKPAGLLQPLKIPEWKW 1120 Query: 4576 EHVTMDFVTGLPKASDGLDAIWVIVDRLTKSAHFLPIKMTHTVDRLSRLYIAEIVRLHGI 4755 E + MDF+TGLP+ S G D+IWV+VDRLTK AHF+P+K T+T +L+ LY+A +V LHG+ Sbjct: 1121 EEIGMDFITGLPRTSAGHDSIWVVVDRLTKVAHFIPVKTTYTGHKLAELYMARVVCLHGV 1180 Query: 4756 PVSIVSDRDPRFTSQFWKSLQSALGTQLKFSTAFHPQTDGQSERVIQILEDMLRACVLDF 4935 P IVS+R +FTS+FW+ LQS LGT+L FSTA+HPQTDGQ+ERV QILEDMLRACVLDF Sbjct: 1181 PKKIVSNRGSQFTSKFWQKLQSELGTRLNFSTAYHPQTDGQTERVNQILEDMLRACVLDF 1240 Query: 4936 GGQWKTHLPLVEFSYNNSFQSSIGMAPFEALYGRPCRSPICWTEVGDTILMGPELVEETT 5115 GG W +LP EFSYNNS+Q+S+ M+P EALYGR CR+P+ W + G+ + G +++ E Sbjct: 1241 GGSWDKNLPYAEFSYNNSYQASLQMSPNEALYGRKCRTPLLWDQTGERQVFGTDILREAE 1300 Query: 5116 EKIRMVQERIKAAQSRQKNYADKRRRPLEFEVGDMVFLKISPKRGISRFGLKGKLKPRYV 5295 EK++++QER++ AQSRQK+YAD RRR L FE GD V+L+++P RG+ RF KGKL PR+V Sbjct: 1301 EKVKIIQERLRVAQSRQKSYADNRRRDLVFEEGDYVYLRVTPLRGVHRFQTKGKLAPRFV 1360 Query: 5296 GPFEITERVGQVAYRLVLPSQLAQIHNVFHVSMLRKYEPDPSHILDWQSLQLEEDVSYEE 5475 GPF+I R G+VAY+L LP +A IH+VFHVS L+K P+ D ++L+ED++Y E Sbjct: 1361 GPFKIVSRRGEVAYQLELPPSMAGIHDVFHVSQLKKCLRVPTEEADPDRIELQEDLTYVE 1420 Query: 5476 GPVQII 5493 PV+I+ Sbjct: 1421 KPVRIL 1426 >gb|AAS98511.1| putative polyprotein [Oryza sativa Japonica Group] Length = 1678 Score = 1303 bits (3373), Expect = 0.0 Identities = 671/1402 (47%), Positives = 910/1402 (64%), Gaps = 11/1402 (0%) Frame = +1 Query: 1372 LQNFQRLRPPRFGGSSDPAVVEEWVLRTREILITMQCPRDQWVPVAAFQFDGDASHWWRS 1551 L F R+RPP F +++P +W+ + L +QC + V A+ Q G AS WW Sbjct: 265 LAEFLRVRPPVFSSTTNPVEASDWLHAIEKKLDLLQCTDQEKVSFASHQLHGPASEWWDH 324 Query: 1552 ER-NVLGDGPVEWADFERMFLDRFISETAREIKQQEFSGMVQGNLTVTDYELRFTRLSRY 1728 R N P+ W +F F I +K++EF + QG+ +VT+Y F RL+RY Sbjct: 325 FRLNRTTAEPITWLEFTAAFRKTHIPSGVVSLKKKEFRSLSQGSRSVTEYLHEFNRLARY 384 Query: 1729 ALELIPTDLQKARRFFRGLRPYLRAKMSVIETTNYRDTVSRAQRVEREDMELQTSRRLTS 1908 A E + D ++ +F GL L + V + +++ V +A R E + ++ +R Sbjct: 385 APEDVRNDEERQEKFLGGLNDELSYPLMVGDYPDFQKLVDKAIRQEDKYNRMEQKKRRI- 443 Query: 1909 RPQASFPPRADPAKRPMYSRPSASVPTYSQYQTPTPSSYXXXXXXXXXXXXXXLTRQIPR 2088 A F + ++P + +P Q + S + Q PR Sbjct: 444 ---AQFKTQQGNNQKPRLTLGPQPMP-----QGGSSSVVRPQRQFFNNNAGNNIRNQAPR 495 Query: 2089 SPASQRLIQAG-------PLTCYGCGEAGHMKRNCP---RLXXXXXXXXXXXXRPQGRVY 2238 A+ Q P+ C+ CG+ GH CP R+ + RV Sbjct: 496 PVAAPTQQQPAKREQGNKPVVCFNCGDPGHYADKCPKPRRVKVVPAQSNSTVSASKARVN 555 Query: 2239 ALTHEEYQPSHEVMEGNLILSNMQVHVLIDTGSSNSFISTRLASMLELDVENTGKILSLS 2418 + E Q + +V+ G +++++ VL D+G+++SF+S A ++VE+ + L +S Sbjct: 556 HVAAAEAQDAPDVILGTFLVNSVPATVLFDSGATHSFLSMSFAGNHGMEVEDLRRPLMVS 615 Query: 2419 TPLGNNTIPKSVCKNCVIRLVDQELSTDLILLELNDFDVILGMDWLVRNHAHVDCYSRIV 2598 TP N + + I + +LILLE D DVILGMDWL R+ +DC +R V Sbjct: 616 TP-SNQALSLQRSPSVRIEIQGVPFLANLILLESKDLDVILGMDWLARHKGVIDCANRKV 674 Query: 2599 TFKIPGRPILKFMGFKNRIEKYLKSKLNNLTTEEKAVPELVEIPVVRDFRSLFPEELPGL 2778 T ++ + ++L+S+LN +T EE IP+VR++ +FP++LPG+ Sbjct: 675 TLNSYDGRVVTVHALSS---EFLRSRLNQITLEE--------IPIVREYPDVFPDDLPGM 723 Query: 2779 PPIRAIEFSIDLIPGTAPISITPYRMAPAETRELKSQIDELTHLGFIRPSFSPWGAPVLF 2958 PP R IEF IDL+PGT PI PYRMA E E+K Q+D+L G+IRPS SPWGAPV+F Sbjct: 724 PPKRDIEFRIDLVPGTTPIHTRPYRMAANELAEVKRQVDDLLQKGYIRPSSSPWGAPVIF 783 Query: 2959 VKKKDGSFRLCIDYRRLNQVTIKNKYPLPRIEDLFDQLQGAQYFSKIDLRSGYHQLKIKE 3138 V+KKD + R+C+DYR LN VTIKN+YPLPRI+DLFDQL+GA FSKIDLRSGYHQL+IKE Sbjct: 784 VEKKDHTQRMCVDYRALNDVTIKNEYPLPRIDDLFDQLKGATVFSKIDLRSGYHQLRIKE 843 Query: 3139 DDIPKTAFRTRLGHYEYLVMPFGLTNAPAAFMDLMNRVFWEYLDKFVIVFIDDILIYXXX 3318 +DIPKTAF TR G +E VM FGLTNAPA FM+LMN+VF EYLDKFV+VFIDDILIY Sbjct: 844 EDIPKTAFTTRYGLFECTVMSFGLTNAPAFFMNLMNKVFMEYLDKFVVVFIDDILIYSRT 903 Query: 3319 XXXXXXXLKITLQTLQDHQLYAKFSKCEFWLKEVKFLGHVVSSKGVSVDPSKIEAVTSWK 3498 L++ L+ L++HQLYAKFSKCEFWL EVKFLGHV+S+ GV+VDPS +E+VT+WK Sbjct: 904 KEEHEEHLRLALEKLREHQLYAKFSKCEFWLSEVKFLGHVISAGGVAVDPSNVESVTNWK 963 Query: 3499 QPTSVAEIRSFLGLAGYYRRFVEGFSMIASPLTRLTQKNVKYEWDDRCEAAFQELKTRLT 3678 QP +V+EIRSFLGLAGYYRRF+E FS IA P+TRL QK+VKY+W + CE +FQELK+RL Sbjct: 964 QPKTVSEIRSFLGLAGYYRRFIENFSKIAKPMTRLLQKDVKYKWSEECEQSFQELKSRLI 1023 Query: 3679 TAPVLIAPVPGESLVIYTDASGIGLGCVLMQNGKVIAYASRKLKTHEKNYPAHDLELASI 3858 +AP+LI P P + +Y DAS GLGCVLMQ GKV+AYASR+L+ HEKNYP HD+ELA++ Sbjct: 1024 SAPILILPDPKKGFQVYCDASKFGLGCVLMQEGKVVAYASRQLRPHEKNYPTHDIELAAV 1083 Query: 3859 VFSLKIWRHYLYGEKFELFSDHKSLKYIFSQKELNMRQRRWMEYLKDYDFTLHYHPGKAN 4038 V +LKIWRHYL+G + E+++DHKSLKYIF+Q +LNMRQRRW+E +KDYD +HYHPGKAN Sbjct: 1084 VHALKIWRHYLFGTRTEVYTDHKSLKYIFTQPDLNMRQRRWLELIKDYDMGIHYHPGKAN 1143 Query: 4039 VVADALSRRKESVLAQMMLSEWHMLESVIEFVFDSPKNEDRQHSYLAPLRLHNTLTQRIV 4218 VVADALSR+ +E L + F+ ++A L TL ++ Sbjct: 1144 VVADALSRK-----GYCNATEGRQLPLELCKEFERLNLGIVGRGFVAALEAKPTLIDQVR 1198 Query: 4219 ESQNLDADVVEHCLKAGDSENHEWNIHADGSIRFQNRLWIPTDEQLRKDILGEAHRSRYS 4398 E+Q D D+ E K + + G++ R+ +P ++ L+ IL EAH + YS Sbjct: 1199 EAQINDPDIQEIKKKMRRGKAIGFLEDEHGTVWLGERICVPDNKDLKDAILKEAHDTLYS 1258 Query: 4399 IHPGGTKMYRDLRKHFWWPGMKKHIAQYVNRCMTCQQVKAEHQRPAGLLQPLPVAEWKWE 4578 IHPG TKMY+DL++ FWW MK+ IA+YV C CQ+VKAEHQ+PAGLLQPL + EWKWE Sbjct: 1259 IHPGSTKMYQDLKERFWWASMKREIAEYVAVCDVCQRVKAEHQKPAGLLQPLKIPEWKWE 1318 Query: 4579 HVTMDFVTGLPKASDGLDAIWVIVDRLTKSAHFLPIKMTHTVDRLSRLYIAEIVRLHGIP 4758 + MDF+TGLP+ S G D+IWVIVDRLTK AHF+P+K T++ RL+ LY+A IV LHG+P Sbjct: 1319 EIGMDFITGLPRTSSGHDSIWVIVDRLTKVAHFIPVKTTYSGSRLAELYMARIVCLHGVP 1378 Query: 4759 VSIVSDRDPRFTSQFWKSLQSALGTQLKFSTAFHPQTDGQSERVIQILEDMLRACVLDFG 4938 IVSDR +FTS FWK LQ +G++L FSTA+HPQTDGQ+ERV QILEDMLRAC LDFG Sbjct: 1379 KKIVSDRGSQFTSNFWKKLQEEMGSKLNFSTAYHPQTDGQTERVNQILEDMLRACALDFG 1438 Query: 4939 GQWKTHLPLVEFSYNNSFQSSIGMAPFEALYGRPCRSPICWTEVGDTILMGPELVEETTE 5118 G W +LP EF YNNS+Q+S+ MAP+EALYGR CR+P+ W + G+ + G +++ E E Sbjct: 1439 GSWDKNLPYAEFLYNNSYQASLQMAPYEALYGRKCRTPLLWDQTGERQVFGTDILREAEE 1498 Query: 5119 KIRMVQERIKAAQSRQKNYADKRRRPLEFEVGDMVFLKISPKRGISRFGLKGKLKPRYVG 5298 K++++QER++ AQSR K+YAD RRR L FE GD V+L+++P RG+ RF KGKL PR+VG Sbjct: 1499 KVKIIQERLRVAQSRHKSYADNRRRDLSFEEGDYVYLRVTPLRGVHRFHTKGKLAPRFVG 1558 Query: 5299 PFEITERVGQVAYRLVLPSQLAQIHNVFHVSMLRKYEPDPSHILDWQSLQLEEDVSYEEG 5478 P++I R G+VAY+L LP LA +HNVFHVS L+K P+ + + ++++ED++Y E Sbjct: 1559 PYKIVSRRGEVAYQLELPQSLAGVHNVFHVSQLKKCLRVPTEEANIEQIEVQEDLTYVEK 1618 Query: 5479 PVQIIGRKEKMLRSRVIPLVKV 5544 P++I+ E+ R+RVI KV Sbjct: 1619 PIRILETSERRTRNRVIRFCKV 1640 >gb|ABA92233.1| retrotransposon protein, putative, Ty3-gypsy subclass [Oryza sativa Japonica Group] Length = 1483 Score = 1303 bits (3372), Expect = 0.0 Identities = 672/1404 (47%), Positives = 913/1404 (65%), Gaps = 13/1404 (0%) Frame = +1 Query: 1372 LQNFQRLRPPRFGGSSDPAVVEEWVLRTREILITMQCPRDQWVPVAAFQFDGDASHWWRS 1551 L +F R+RPP F +++P +W+ + L +QC + V A+ Q G A+ WW Sbjct: 65 LADFLRVRPPTFSSTTNPVEAGDWLHAVEKKLDLIQCTEQEKVSFASHQLHGPAAEWWDH 124 Query: 1552 ERNVLGDG-PVEWADFERMFLDRFISETAREIKQQEFSGMVQGNLTVTDYELRFTRLSRY 1728 R +G P+ W +F F I +K++EF + QG+ +VT Y F RL+RY Sbjct: 125 FRQGRAEGEPITWQEFTAAFKKTHIPAGVVALKKREFRELNQGSRSVTKYLHDFNRLARY 184 Query: 1729 ALELIPTDLQKARRFFRGLRPYLRAKMSVIETTNYRDTVSRAQRVEREDMELQTSRRLTS 1908 A E + TD ++ +F GL L + + +++ V +A R E + ++ +R Sbjct: 185 APEDVRTDEERQEKFLEGLNDELSYALMSTDFRDFQQLVDKAIRQEDKYNRMEQKKRRA- 243 Query: 1909 RPQASFPPRADPAKRPMYSRPSASVPTYSQYQT-----PTPSSYXXXXXXXXXXXXXXLT 2073 A F + +RP VP+Y Q + P Y + Sbjct: 244 ---AQFKTQQGSNQRPRLVT-GPQVPSYPQGGSSSVVRPQRQFYNNNTGNRGNDNRNVVA 299 Query: 2074 RQIPRSPASQRLIQ----AGPLTCYGCGEAGHMKRNCP---RLXXXXXXXXXXXXRPQGR 2232 R +PA + ++ + P C+ CG+ GH CP R+ P+ R Sbjct: 300 RPAA-TPAQNQPVRKEQGSKPGVCFNCGDPGHYADKCPKPRRVKNAPAPNNSNAPAPKAR 358 Query: 2233 VYALTHEEYQPSHEVMEGNLILSNMQVHVLIDTGSSNSFISTRLASMLELDVENTGKILS 2412 V + E Q + +V+ G ++++ VL D+G+++SF+S AS ++V + G+ L Sbjct: 359 VNHVAAAEAQSAPDVILGTFPVNSIPATVLFDSGATHSFLSKSFASNHGMEVISLGRPLL 418 Query: 2413 LSTPLGNNTIPKSVCKNCVIRLVDQELSTDLILLELNDFDVILGMDWLVRNHAHVDCYSR 2592 ++T LGN C + I + + + LILLE D DVILGMDWL R+ +DC SR Sbjct: 419 VNT-LGNQVFSTQYCPSATIEIEEVPFPSSLILLESKDLDVILGMDWLSRHRGVIDCASR 477 Query: 2593 IVTFKIPGRPILKFMGFKNRIEKYLKSKLNNLTTEEKAVPELVEIPVVRDFRSLFPEELP 2772 VT + F+ + + +++ L EIP+V+D+ +FPE+L Sbjct: 478 KVTLTNSIGETVSFLASSPKSHGVILNQV-----------ALQEIPIVQDYPDVFPEDLL 526 Query: 2773 GLPPIRAIEFSIDLIPGTAPISITPYRMAPAETRELKSQIDELTHLGFIRPSFSPWGAPV 2952 G+PP R IEF IDL+PGT PI PYRMA E E+K Q+D+L G+IRPS SPWGAPV Sbjct: 527 GMPPKRDIEFRIDLVPGTNPIHKRPYRMAANELAEVKRQVDDLLQKGYIRPSTSPWGAPV 586 Query: 2953 LFVKKKDGSFRLCIDYRRLNQVTIKNKYPLPRIEDLFDQLQGAQYFSKIDLRSGYHQLKI 3132 +FV+KKD + R+C+DYR LN+VTIKNKYPLPRI+DLFDQL+GA FSKIDLRSGYHQL+I Sbjct: 587 IFVEKKDHTQRMCVDYRALNEVTIKNKYPLPRIDDLFDQLEGATVFSKIDLRSGYHQLRI 646 Query: 3133 KEDDIPKTAFRTRLGHYEYLVMPFGLTNAPAAFMDLMNRVFWEYLDKFVIVFIDDILIYX 3312 +E+DIPKTAF TR G +E VM FGLTNAPA FM+LMN+VF EYLDKFV+VFIDDILIY Sbjct: 647 REEDIPKTAFTTRYGLFECTVMSFGLTNAPAFFMNLMNKVFMEYLDKFVVVFIDDILIYS 706 Query: 3313 XXXXXXXXXLKITLQTLQDHQLYAKFSKCEFWLKEVKFLGHVVSSKGVSVDPSKIEAVTS 3492 L++ L+ L++HQLYAKFSKCEFWL EVKFLGHV+SS GV+VDPS +E+V S Sbjct: 707 KTKEEHEEHLRLALEKLREHQLYAKFSKCEFWLSEVKFLGHVISSGGVAVDPSNVESVLS 766 Query: 3493 WKQPTSVAEIRSFLGLAGYYRRFVEGFSMIASPLTRLTQKNVKYEWDDRCEAAFQELKTR 3672 WKQP +V+EIRSFLGLAGYYRRF+E FS IA P+TRL QK VKY+W + CE +FQELK R Sbjct: 767 WKQPKTVSEIRSFLGLAGYYRRFIENFSKIARPMTRLLQKEVKYKWTEDCERSFQELKKR 826 Query: 3673 LTTAPVLIAPVPGESLVIYTDASGIGLGCVLMQNGKVIAYASRKLKTHEKNYPAHDLELA 3852 L TAPVLI P + +Y DAS +GLGCVLMQ GKV+AYASR+L+ HE NYP HDLELA Sbjct: 827 LVTAPVLILPDSRKGFQVYCDASRLGLGCVLMQEGKVVAYASRQLRPHENNYPTHDLELA 886 Query: 3853 SIVFSLKIWRHYLYGEKFELFSDHKSLKYIFSQKELNMRQRRWMEYLKDYDFTLHYHPGK 4032 ++V +LKIWRHYL+G + E+++DHKSLKYIF+Q +LNMRQRRW+E +KDYD +HYHPGK Sbjct: 887 AVVHALKIWRHYLFGNRTEIYTDHKSLKYIFTQPDLNMRQRRWLELIKDYDMEIHYHPGK 946 Query: 4033 ANVVADALSRRKESVLAQMMLSEWHMLESVIEFVFDSPKNEDRQHSYLAPLRLHNTLTQR 4212 ANVVADALSR+ +++ W + + F+ + ++A L TL + Sbjct: 947 ANVVADALSRKSYCNMSEGRRLPWELCQE-----FEKLNLGIVSNGFVAALEAKPTLFDQ 1001 Query: 4213 IVESQNLDADVVEHCLKAGDSENHEWNIHADGSIRFQNRLWIPTDEQLRKDILGEAHRSR 4392 + E+Q D D+ E + + G++ R+ +P ++ L+ I+ EAH + Sbjct: 1002 VREAQVNDPDIQEIKKNMRRGKAIGYVEDEQGTVWLGERICVPENKGLKDTIMKEAHETL 1061 Query: 4393 YSIHPGGTKMYRDLRKHFWWPGMKKHIAQYVNRCMTCQQVKAEHQRPAGLLQPLPVAEWK 4572 YSIHPG TKMY+DL++ FWW M++ IA+YV C CQ+VKAEHQ+PAGLLQPL + EWK Sbjct: 1062 YSIHPGSTKMYQDLKQQFWWASMRREIAEYVALCDVCQRVKAEHQKPAGLLQPLKIPEWK 1121 Query: 4573 WEHVTMDFVTGLPKASDGLDAIWVIVDRLTKSAHFLPIKMTHTVDRLSRLYIAEIVRLHG 4752 WE + MDF+TGLP+ S G D+IWV+VDRLTK AHF+P+K T+T ++L+ LY+A +V LHG Sbjct: 1122 WEEIGMDFITGLPRTSAGHDSIWVVVDRLTKVAHFIPVKTTYTGNKLAELYMARVVCLHG 1181 Query: 4753 IPVSIVSDRDPRFTSQFWKSLQSALGTQLKFSTAFHPQTDGQSERVIQILEDMLRACVLD 4932 +P IVSDR +FTS+FW+ LQ +GT+L FSTA+HPQTDGQ+ER+ QILEDMLRACVLD Sbjct: 1182 VPKKIVSDRGSQFTSKFWQKLQLEMGTRLNFSTAYHPQTDGQTERINQILEDMLRACVLD 1241 Query: 4933 FGGQWKTHLPLVEFSYNNSFQSSIGMAPFEALYGRPCRSPICWTEVGDTILMGPELVEET 5112 FGG W +LP EFSYNNS+Q+S+ MAP+EALYGR CR+P+ W + G+ + G +++ E Sbjct: 1242 FGGSWDKNLPYAEFSYNNSYQASLQMAPYEALYGRKCRTPLLWDQTGERQVFGTDILREA 1301 Query: 5113 TEKIRMVQERIKAAQSRQKNYADKRRRPLEFEVGDMVFLKISPKRGISRFGLKGKLKPRY 5292 EK++++QER++ AQSRQK+YAD RRR L FE GD V+L+++P RG+ RF KGKL PR+ Sbjct: 1302 EEKVKIIQERLRVAQSRQKSYADNRRRDLAFEEGDYVYLRVTPLRGVHRFQTKGKLAPRF 1361 Query: 5293 VGPFEITERVGQVAYRLVLPSQLAQIHNVFHVSMLRKYEPDPSHILDWQSLQLEEDVSYE 5472 VGPF+I R G+VAY+L LP +A IH+VFHVS L+K P+ D ++L+ED++Y Sbjct: 1362 VGPFKIVSRRGEVAYQLELPPSMAGIHDVFHVSQLKKCLRVPTEEADPDRIELQEDLTYV 1421 Query: 5473 EGPVQIIGRKEKMLRSRVIPLVKV 5544 E PV+I+ E+ R+ VI KV Sbjct: 1422 EKPVRILEVTERNTRNCVIRFCKV 1445 >emb|CAE04932.2| OSJNBa0017P10.9 [Oryza sativa Japonica Group] Length = 1752 Score = 1302 bits (3370), Expect = 0.0 Identities = 673/1402 (48%), Positives = 912/1402 (65%), Gaps = 11/1402 (0%) Frame = +1 Query: 1372 LQNFQRLRPPRFGGSSDPAVVEEWVLRTREILITMQCPRDQWVPVAAFQFDGDASHWWRS 1551 L F R+RPP F +++P +W+ + L +QC + V A+ Q G AS WW Sbjct: 340 LAEFLRVRPPIFSSTTNPVEAGDWLHTIEKKLDLLQCTDQEKVSFASHQLHGPASEWWDH 399 Query: 1552 ER-NVLGDGPVEWADFERMFLDRFISETAREIKQQEFSGMVQGNLTVTDYELRFTRLSRY 1728 R N P+ W +F F I +K++EF + QG+ +VT+Y F RL+RY Sbjct: 400 FRLNRTTAEPITWLEFTAAFRKTHIPSGVVSLKKKEFRSLTQGSRSVTEYLHEFNRLARY 459 Query: 1729 ALELIPTDLQKARRFFRGLRPYLRAKMSVIETTNYRDTVSRAQRVEREDMELQTSRRLTS 1908 A E + D ++ +F GL L + + +++ V +A R E + ++ +R Sbjct: 460 APEDVRNDEERQEKFLEGLNDELSYPLMTGDYHDFQKLVDKAIRQEDKYNRMEQKKRRI- 518 Query: 1909 RPQASFPPRADPAKRPMYSRPSASVPTYSQYQTPTPSSYXXXXXXXXXXXXXXLTRQIPR 2088 A F R +RP + +P Q + S + Q PR Sbjct: 519 ---AQFKVRQGNNQRPRLTLGPQPMP-----QGGSSSVVHPQRQFFNNNAGNNIRNQAPR 570 Query: 2089 ---SPASQRLIQ----AGPLTCYGCGEAGHMKRNCP---RLXXXXXXXXXXXXRPQGRVY 2238 +P Q+ ++ + P+ C+ CG+ GH CP R+ P+ RV Sbjct: 571 PVAAPTQQQPVKREQGSKPVVCFNCGDPGHYADKCPKPRRVKVVPAQSNSTVPAPKARVN 630 Query: 2239 ALTHEEYQPSHEVMEGNLILSNMQVHVLIDTGSSNSFISTRLASMLELDVENTGKILSLS 2418 + E Q + +V+ G +++++ VL D+G+++SF+S A ++VE+ + L +S Sbjct: 631 HVAAAEAQDAPDVILGTFLVNSVPATVLFDSGATHSFLSMSFAGNHGMEVEDLRRPLMVS 690 Query: 2419 TPLGNNTIPKSVCKNCVIRLVDQELSTDLILLELNDFDVILGMDWLVRNHAHVDCYSRIV 2598 TP N + + I + +LILLE D DVILGMDWL R+ +DC +R V Sbjct: 691 TP-SNQALSLQRSPSVRIEIQGVPFLANLILLESKDLDVILGMDWLARHKGVIDCANRKV 749 Query: 2599 TFKIPGRPILKFMGFKNRIEKYLKSKLNNLTTEEKAVPELVEIPVVRDFRSLFPEELPGL 2778 T ++ + + L+S+LN +T EE IPVVR++ +FP++LPG+ Sbjct: 750 TLTSNDGRVVTVHALSS---ESLRSRLNQITLEE--------IPVVREYPDVFPDDLPGM 798 Query: 2779 PPIRAIEFSIDLIPGTAPISITPYRMAPAETRELKSQIDELTHLGFIRPSFSPWGAPVLF 2958 PP R IEF IDL+PGT PI PYRMA E E+K Q+D+L G+IRPS SPWGAPV+F Sbjct: 799 PPKRDIEFRIDLVPGTTPIHKRPYRMAANELAEVKRQVDDLLQKGYIRPSSSPWGAPVIF 858 Query: 2959 VKKKDGSFRLCIDYRRLNQVTIKNKYPLPRIEDLFDQLQGAQYFSKIDLRSGYHQLKIKE 3138 V+KKD + R+C+DYR LN VTIKNKYPLPRI+DLFDQL+GA FSKIDLRSGYHQL+IKE Sbjct: 859 VEKKDHTQRMCVDYRTLNDVTIKNKYPLPRIDDLFDQLKGATVFSKIDLRSGYHQLRIKE 918 Query: 3139 DDIPKTAFRTRLGHYEYLVMPFGLTNAPAAFMDLMNRVFWEYLDKFVIVFIDDILIYXXX 3318 +DIPKTAF TR G +E VM FGLTNAPA FM+LMN+VF EYLDKFV+VFIDDILIY Sbjct: 919 EDIPKTAFTTRYGLFECTVMSFGLTNAPAFFMNLMNKVFMEYLDKFVVVFIDDILIYSRT 978 Query: 3319 XXXXXXXLKITLQTLQDHQLYAKFSKCEFWLKEVKFLGHVVSSKGVSVDPSKIEAVTSWK 3498 L++ L+ L++HQLYAKFSKCEFWL EVKFLGHV+S+ GV+VDPS +E+VT+WK Sbjct: 979 KEEHEEHLRLALEKLREHQLYAKFSKCEFWLSEVKFLGHVISA-GVAVDPSNVESVTNWK 1037 Query: 3499 QPTSVAEIRSFLGLAGYYRRFVEGFSMIASPLTRLTQKNVKYEWDDRCEAAFQELKTRLT 3678 QP + +EIRSFLGLAGYYRRF+E FS IA P+TRL QK+VKY+W + CE +FQELK RL Sbjct: 1038 QPKTASEIRSFLGLAGYYRRFIENFSKIAKPMTRLLQKDVKYKWSEECEQSFQELKNRLI 1097 Query: 3679 TAPVLIAPVPGESLVIYTDASGIGLGCVLMQNGKVIAYASRKLKTHEKNYPAHDLELASI 3858 +AP+LI P P + +Y DAS +GLGCVLMQ+GKV+AYASR+L+ HEKNYP HDLELA++ Sbjct: 1098 SAPILILPDPKKGFQVYCDASKLGLGCVLMQDGKVVAYASRQLRPHEKNYPTHDLELAAV 1157 Query: 3859 VFSLKIWRHYLYGEKFELFSDHKSLKYIFSQKELNMRQRRWMEYLKDYDFTLHYHPGKAN 4038 V +LKIWR+YL+G + E+++DHKSLKYIF+Q +LNMRQRRW+E +KDYD +HYHPGKAN Sbjct: 1158 VHALKIWRYYLFGTRTEVYTDHKSLKYIFTQPDLNMRQRRWLELIKDYDMGIHYHPGKAN 1217 Query: 4039 VVADALSRRKESVLAQMMLSEWHMLESVIEFVFDSPKNEDRQHSYLAPLRLHNTLTQRIV 4218 VVADALSR+ +E L + F+ ++A L TL ++ Sbjct: 1218 VVADALSRK-----GYCNATEGRQLPLELCKEFERLNLGIVSRGFVAALEAKPTLIDQVR 1272 Query: 4219 ESQNLDADVVEHCLKAGDSENHEWNIHADGSIRFQNRLWIPTDEQLRKDILGEAHRSRYS 4398 E+Q D D++E + + G++ R+ +P ++ L+ IL E H + YS Sbjct: 1273 EAQINDPDILEIKKNMRRGKAIGFLEDEQGTVWLGERICVPDNKDLKDAILKETHDTLYS 1332 Query: 4399 IHPGGTKMYRDLRKHFWWPGMKKHIAQYVNRCMTCQQVKAEHQRPAGLLQPLPVAEWKWE 4578 IHPG TKMY+DL++ FWW MK+ IA+YV C CQ+VKAEHQ+PAGLLQPL + EWKWE Sbjct: 1333 IHPGSTKMYQDLKERFWWASMKREIAEYVAVCDVCQRVKAEHQKPAGLLQPLKIPEWKWE 1392 Query: 4579 HVTMDFVTGLPKASDGLDAIWVIVDRLTKSAHFLPIKMTHTVDRLSRLYIAEIVRLHGIP 4758 + MDF+TGLP+ S G D+IWVIVDRLTK AHF+P+K T++ RL+ LY+A IV LHG+P Sbjct: 1393 EIGMDFITGLPRTSSGHDSIWVIVDRLTKVAHFIPVKTTYSGSRLAELYMARIVCLHGVP 1452 Query: 4759 VSIVSDRDPRFTSQFWKSLQSALGTQLKFSTAFHPQTDGQSERVIQILEDMLRACVLDFG 4938 IVSDR +FTS FWK LQ +G++L FSTA+HPQTDGQ+ERV QILEDMLRAC LDFG Sbjct: 1453 KKIVSDRGSQFTSNFWKKLQEEMGSKLNFSTAYHPQTDGQTERVNQILEDMLRACALDFG 1512 Query: 4939 GQWKTHLPLVEFSYNNSFQSSIGMAPFEALYGRPCRSPICWTEVGDTILMGPELVEETTE 5118 G W +LP EFSYNNS+Q+S+ MAP+EALYGR CR+P+ W + G+ + G +++ E E Sbjct: 1513 GSWDKNLPYAEFSYNNSYQASLQMAPYEALYGRKCRTPLLWDQTGERQVFGTDILREAEE 1572 Query: 5119 KIRMVQERIKAAQSRQKNYADKRRRPLEFEVGDMVFLKISPKRGISRFGLKGKLKPRYVG 5298 K++++QER++ AQSR K+YAD RRR L FE GD V+L+++P RG+ RF KGKL PR+VG Sbjct: 1573 KVKIIQERLRVAQSRHKSYADNRRRDLSFEEGDYVYLRVTPLRGVHRFHTKGKLAPRFVG 1632 Query: 5299 PFEITERVGQVAYRLVLPSQLAQIHNVFHVSMLRKYEPDPSHILDWQSLQLEEDVSYEEG 5478 P++I R G+VAY+L LP LA +HNVFHVS L+K P+ + + ++++ED++Y E Sbjct: 1633 PYKIVSRRGEVAYQLELPQSLAGVHNVFHVSQLKKCLRVPTEEANLEQIEVQEDLTYVEK 1692 Query: 5479 PVQIIGRKEKMLRSRVIPLVKV 5544 P+ I+ E+ R+RVI KV Sbjct: 1693 PIHILEIDERRTRNRVIRFCKV 1714 >gb|ABA97771.1| retrotransposon protein, putative, Ty3-gypsy subclass [Oryza sativa Japonica Group] Length = 2174 Score = 1302 bits (3369), Expect = 0.0 Identities = 671/1404 (47%), Positives = 918/1404 (65%), Gaps = 13/1404 (0%) Frame = +1 Query: 1372 LQNFQRLRPPRFGGSSDPAVVEEWVLRTREILITMQCPRDQWVPVAAFQFDGDASHWWRS 1551 L F R+RPP F +++P +W+ + L +QC + V A+ Q G AS WW Sbjct: 761 LAEFLRVRPPVFSSTTNPVEASDWLHAIEKKLDLLQCTDQEKVSFASHQLHGPASEWWDH 820 Query: 1552 ER-NVLGDGPVEWADFERMFLDRFISETAREIKQQEFSGMVQGNLTVTDYELRFTRLSRY 1728 R N P+ W +F F I +K++EF + QG+ +VT+Y F RL+RY Sbjct: 821 FRLNRTTAEPITWLEFTAAFRKTHIPSGVVSLKKKEFRSLSQGSRSVTEYLHEFNRLARY 880 Query: 1729 ALELIPTDLQKARRFFRGLRPYLRAKMSVIETTNYRDTVSRAQRVEREDMELQTSRRLTS 1908 A E + D ++ +F GL L + V + +++ V +A R E + ++ +R Sbjct: 881 APEDVRNDEERQEKFLGGLNDELSYPLMVGDYPDFQKLVDKAIRQEDKYNRMEQKKRRI- 939 Query: 1909 RPQASFPPRADPAKRPMYSRPSASVPTYSQYQTPTPSSYXXXXXXXXXXXXXXLTRQIPR 2088 A F + ++P + +P Q + S + Q PR Sbjct: 940 ---AQFKTQQGNNQKPRLTLGPQPMP-----QGGSSSVVRPQRQFFNNNAGNNIRNQAPR 991 Query: 2089 ---SPASQRLIQAG----PLTCYGCGEAGHMKRNCP---RLXXXXXXXXXXXXRPQGRVY 2238 +PA Q+ + P+ C+ CG+ GH CP R+ + RV Sbjct: 992 PVAAPAQQQPAKREQGNKPVVCFNCGDPGHYADKCPKPRRVKVVPAQNNSAVPASKARVN 1051 Query: 2239 ALTHEEYQPSHEVMEGNLILSNMQVHVLIDTGSSNSFISTRLASMLELDVENTGKILSLS 2418 + E Q + +V+ G +++++ VL D+G+++SF+ST A ++VE+ + L +S Sbjct: 1052 HVAAAEAQDAPDVILGTFLVNSVPATVLFDSGATHSFLSTSFAGNHGMEVEDLRRPLMVS 1111 Query: 2419 TPLGNNTIPKSVCKNCVIRLVDQELSTDLILLELNDFDVILGMDWLVRNHAHVDCYSRIV 2598 TP N + + I + +LILL+ D DVILGMDWL R+ +DC +R V Sbjct: 1112 TP-SNQALSLQRSPSVRIEIQGVPFLANLILLKSKDLDVILGMDWLARHKGVIDCANRKV 1170 Query: 2599 TFKIPGRPILKFMGFKNRIEKYLKSKLNNLTTEEKAVPELVEIPVVRDFRSLFPEELPGL 2778 T ++ + + L+S+LN +T EE IP+VR++ +FP++LPG+ Sbjct: 1171 TLNSYDGRVVTVHALSS---ESLRSRLNQITLEE--------IPIVREYPDVFPDDLPGM 1219 Query: 2779 PPIRAIEFSIDLIPGTAPISITPYRMAPAETRELKSQIDELTHLGFIRPSFSPWGAPVLF 2958 PP R IEF IDL+PGT PI PYRMA E E+K Q+D+L G+IRPS SPWGAPV+F Sbjct: 1220 PPKRDIEFRIDLVPGTTPIHKRPYRMAANELAEVKRQVDDLLQKGYIRPSSSPWGAPVIF 1279 Query: 2959 VKKKDGSFRLCIDYRRLNQVTIKNKYPLPRIEDLFDQLQGAQYFSKIDLRSGYHQLKIKE 3138 V+KKD + R+C+DYR LN VTIKNKYPLPRI+DLFDQL+GA FSKIDLRSGYHQL+IKE Sbjct: 1280 VEKKDHTQRMCVDYRALNDVTIKNKYPLPRIDDLFDQLKGATVFSKIDLRSGYHQLRIKE 1339 Query: 3139 DDIPKTAFRTRLGHYEYLVMPFGLTNAPAAFMDLMNRVFWEYLDKFVIVFIDDILIYXXX 3318 +DIPKT F TR G +E VM FGLTNAPA FM+LMN+VF EYLDKFV+VFIDDILIY Sbjct: 1340 EDIPKTTFTTRYGLFECTVMSFGLTNAPAFFMNLMNKVFMEYLDKFVVVFIDDILIYSRT 1399 Query: 3319 XXXXXXXLKITLQTLQDHQLYAKFSKCEFWLKEVKFLGHVVSSKGVSVDPSKIEAVTSWK 3498 L++ L+ L++HQLYAKFSKCEFWL EVKFLGHV+S+ GV+VDPS +E+VT+WK Sbjct: 1400 KEEHEEHLRLALEKLREHQLYAKFSKCEFWLSEVKFLGHVISAGGVAVDPSNVESVTNWK 1459 Query: 3499 QPTSVAEIRSFLGLAGYYRRFVEGFSMIASPLTRLTQKNVKYEWDDRCEAAFQELKTRLT 3678 QP +V+EIRSFLGLAGYYRRF+E FS IA P+TRL QK+VKY+W + CE +FQELK+RL Sbjct: 1460 QPKTVSEIRSFLGLAGYYRRFIENFSKIAKPMTRLLQKDVKYKWSEECEQSFQELKSRLI 1519 Query: 3679 TAPVLIAPVPGESLVIYTDASGIGLGCVLMQNGKVIAYASRKLKTHEKNYPAHDLELASI 3858 +AP+LI P P + ++ DAS +GLGCVLMQ+GKV+AYASR+L+ HEKNYP HD+ELA++ Sbjct: 1520 SAPILILPDPKKGFQVHCDASKLGLGCVLMQDGKVVAYASRQLRPHEKNYPTHDIELAAV 1579 Query: 3859 VFSLKIWRHYLYGEKFELFSDHKSLKYIFSQKELNMRQRRWMEYLKDYDFTLHYHPGKAN 4038 V +LKIW HYL+G + E+++DHKSLKYIF+Q +LNMRQRRW+E +KDYD +HYHPGKAN Sbjct: 1580 VHALKIWHHYLFGTRTEVYTDHKSLKYIFTQPDLNMRQRRWLELIKDYDMGIHYHPGKAN 1639 Query: 4039 VVADALSRRKESVLAQMMLSEWHMLESVIEFVFDSPKNEDRQHSYLAPLRLHNTLTQRIV 4218 VVADALSR+ +E L + F+ ++A L TL ++ Sbjct: 1640 VVADALSRK-----GYCNATEGRQLPLELCKEFERLNLGIVDRGFVAALEAKPTLIDQVR 1694 Query: 4219 ESQNLDADV--VEHCLKAGDSENHEWNIHADGSIRFQNRLWIPTDEQLRKDILGEAHRSR 4392 E+Q D D+ ++ ++ G + + H G++ R+ +P ++ L+ IL EAH + Sbjct: 1695 EAQINDPDIQEIKKNMRRGKAIGFLEDEH--GTVWLGERICVPDNKDLKDAILKEAHDTL 1752 Query: 4393 YSIHPGGTKMYRDLRKHFWWPGMKKHIAQYVNRCMTCQQVKAEHQRPAGLLQPLPVAEWK 4572 YSIHPG TKMY+DL++ FWW MK+ IA+YV C CQ+VKAEHQ+PAGLLQPL + EWK Sbjct: 1753 YSIHPGSTKMYQDLKERFWWASMKREIAEYVAVCDVCQRVKAEHQKPAGLLQPLKIPEWK 1812 Query: 4573 WEHVTMDFVTGLPKASDGLDAIWVIVDRLTKSAHFLPIKMTHTVDRLSRLYIAEIVRLHG 4752 WE + MDF+TGLP+ S G D+IWVIVDRLTK AHF+P+K T++ RL+ LY+A IV LHG Sbjct: 1813 WEEIGMDFITGLPRTSSGHDSIWVIVDRLTKVAHFIPVKTTYSGSRLAELYMARIVCLHG 1872 Query: 4753 IPVSIVSDRDPRFTSQFWKSLQSALGTQLKFSTAFHPQTDGQSERVIQILEDMLRACVLD 4932 +P IVSDR +FTS FWK LQ +G++L FSTA+HPQTDGQ+ERV QILEDMLRAC LD Sbjct: 1873 VPKKIVSDRGSQFTSNFWKKLQEEMGSKLNFSTAYHPQTDGQTERVNQILEDMLRACALD 1932 Query: 4933 FGGQWKTHLPLVEFSYNNSFQSSIGMAPFEALYGRPCRSPICWTEVGDTILMGPELVEET 5112 FGG W +LP EFSYNNS+Q+S+ MAP+EALYGR CR+P+ W + G+ + G +++ E Sbjct: 1933 FGGSWDKNLPYAEFSYNNSYQASLQMAPYEALYGRKCRTPLLWDQTGERQVFGTDILREA 1992 Query: 5113 TEKIRMVQERIKAAQSRQKNYADKRRRPLEFEVGDMVFLKISPKRGISRFGLKGKLKPRY 5292 EK++++QER++ AQSR K+YAD RRR L FE GD V+L+++P RG+ RF KGKL PR+ Sbjct: 1993 EEKVKIIQERLRVAQSRHKSYADNRRRDLSFEEGDYVYLRVTPLRGVHRFHTKGKLAPRF 2052 Query: 5293 VGPFEITERVGQVAYRLVLPSQLAQIHNVFHVSMLRKYEPDPSHILDWQSLQLEEDVSYE 5472 VGP++I R G+VAY+L LP LA +HNVFHVS L+K P+ + + ++++ED++Y Sbjct: 2053 VGPYKIVSRRGEVAYQLELPQSLAGVHNVFHVSQLKKCLRVPTEEANIEQIEVQEDLTYV 2112 Query: 5473 EGPVQIIGRKEKMLRSRVIPLVKV 5544 E P++I+ E+ R+RVI KV Sbjct: 2113 EKPIRILETSERRTRNRVIRFCKV 2136 Score = 101 bits (252), Expect = 4e-18 Identities = 68/274 (24%), Positives = 118/274 (43%), Gaps = 5/274 (1%) Frame = +1 Query: 1372 LQNFQRLRPPRFGGSSDPAVVEEWVLRTREILITMQCPRDQWVPVAAFQFDGDASHWWRS 1551 L +F R+RPP F +++P +W+ + L +QC + V A+ Q G A+ WW Sbjct: 67 LADFLRVRPPTFSSTTNPVEAGDWLHAVEKKLDLIQCTEQEKVSFASHQLHGPAAEWWDH 126 Query: 1552 ERNVLGDGP-VEWADFERMFLDRFISETAREIKQQEFSGMVQGNLTVTDYELRFTRLSRY 1728 R +G + W +F F I +K++EF + QG+ +VT+Y RL+RY Sbjct: 127 FRQGRAEGELITWQEFTTAFKKTHIPSGVVALKKREFRALNQGSRSVTEYLHDVNRLARY 186 Query: 1729 ALELIPTDLQKARRFFRGLRPYLRAKMSVIETTNYRDTVSRAQRVEREDMELQTSRRLTS 1908 A E + TD ++ +F GL L + + +++ V +A R E + ++ +R + Sbjct: 187 APEDVRTDEERQEKFLEGLNDELSYALMSTDFRDFQQLVDKAIRQEDKYNRMEQKKRRAA 246 Query: 1909 RPQASFPPRADPAKRPMYSRPSASVPTYSQYQTPTPSSYXXXXXXXXXXXXXXLTRQIPR 2088 + +A P PS S P Y + R Sbjct: 247 QFKAQQGSNQRPRLVTGPQAPSYPQGGSSSVVRPQRQFYNNNTGNRGNDNRNMVARP-AA 305 Query: 2089 SPASQRLIQ----AGPLTCYGCGEAGHMKRNCPR 2178 +PA + ++ + P+ C+ CG+ GH CP+ Sbjct: 306 TPAQNQPVRKEQGSKPVICFNCGDPGHYADKCPK 339 Score = 61.2 bits (147), Expect = 5e-06 Identities = 38/102 (37%), Positives = 52/102 (50%) Frame = +1 Query: 2467 VIRLVDQELSTDLILLELNDFDVILGMDWLVRNHAHVDCYSRIVTFKIPGRPILKFMGFK 2646 V+ + + + LILLE D DVILGMDWL R+ +DC +R VT + F Sbjct: 376 VLEIEEVLFPSSLILLESKDLDVILGMDWLSRHRGVIDCANRKVTLTSSNWETVSFFVSS 435 Query: 2647 NRIEKYLKSKLNNLTTEEKAVPELVEIPVVRDFRSLFPEELP 2772 KY LN + L EIP+V+D+ +FPE+LP Sbjct: 436 ---PKYHGVNLNQVA--------LQEIPIVQDYPDVFPEDLP 466 >emb|CAE04776.3| OSJNBb0115I21.3 [Oryza sativa Japonica Group] Length = 1779 Score = 1301 bits (3368), Expect = 0.0 Identities = 672/1402 (47%), Positives = 911/1402 (64%), Gaps = 11/1402 (0%) Frame = +1 Query: 1372 LQNFQRLRPPRFGGSSDPAVVEEWVLRTREILITMQCPRDQWVPVAAFQFDGDASHWWRS 1551 L F R+RPP F +++P +W+ + L +QC V A+ Q G AS WW Sbjct: 366 LAEFLRVRPPVFSSTTNPVEASDWLHAIEKKLDLLQCTDQDKVSFASHQLHGPASEWWDH 425 Query: 1552 ER-NVLGDGPVEWADFERMFLDRFISETAREIKQQEFSGMVQGNLTVTDYELRFTRLSRY 1728 R N P+ W +F F I +K++EF + QG+ +VT+Y F RL+RY Sbjct: 426 FRLNRTTAEPITWLEFTAAFRKTHIPSGVVSLKKKEFRSLTQGSRSVTEYLHEFNRLARY 485 Query: 1729 ALELIPTDLQKARRFFRGLRPYLRAKMSVIETTNYRDTVSRAQRVEREDMELQTSRRLTS 1908 A E + D + +F GL L + V + +++ V +A R E + ++ +R Sbjct: 486 APEDVRNDEECQEKFLGGLNDELSYPLMVGDYPDFQKLVDKAIRQEDKYNRMEQKKRRI- 544 Query: 1909 RPQASFPPRADPAKRPMYSRPSASVPTYSQYQTPTPSSYXXXXXXXXXXXXXXLTRQIPR 2088 A F + ++P + SVP Q + S + Q PR Sbjct: 545 ---AQFKTQQGNNQKPRLTLGPQSVP-----QGGSSSVVRPQRQFFNNNAGNNIRNQAPR 596 Query: 2089 S---PASQRLIQAG----PLTCYGCGEAGHMKRNCP---RLXXXXXXXXXXXXRPQGRVY 2238 PA Q+ + P+ C+ CG+ GH CP R+ + RV Sbjct: 597 PVAVPAQQQPAKREQGNKPVVCFNCGDPGHYADKCPKPRRVKVVPAQNNSAVPASKARVN 656 Query: 2239 ALTHEEYQPSHEVMEGNLILSNMQVHVLIDTGSSNSFISTRLASMLELDVENTGKILSLS 2418 + E Q + +V+ G +++++ VL D+G+++SF+S A ++VE+ + L +S Sbjct: 657 HVAAAEAQGAPDVILGTFLVNSVPATVLFDSGATHSFLSMSFAGNHGMEVEDLRRPLMVS 716 Query: 2419 TPLGNNTIPKSVCKNCVIRLVDQELSTDLILLELNDFDVILGMDWLVRNHAHVDCYSRIV 2598 TP N + + I + +LILL+ D DVILGMDWL R+ +DC +R V Sbjct: 717 TP-SNQALSLQRSPSVRIEIQGVPFLANLILLKSKDLDVILGMDWLARHKGVIDCANRKV 775 Query: 2599 TFKIPGRPILKFMGFKNRIEKYLKSKLNNLTTEEKAVPELVEIPVVRDFRSLFPEELPGL 2778 T ++ + + L+S+LN +T EE IP+VR++ +FP++LPG+ Sbjct: 776 TLNSYDGRVVTVHALSS---ESLRSRLNQITLEE--------IPIVREYPDVFPDDLPGM 824 Query: 2779 PPIRAIEFSIDLIPGTAPISITPYRMAPAETRELKSQIDELTHLGFIRPSFSPWGAPVLF 2958 PP R IEF IDL+PGT PI PYRMA E E+K Q+D+L G+IRPS SPWGAPV+F Sbjct: 825 PPKRDIEFRIDLVPGTTPIHKRPYRMAANELAEVKRQVDDLLQKGYIRPSSSPWGAPVIF 884 Query: 2959 VKKKDGSFRLCIDYRRLNQVTIKNKYPLPRIEDLFDQLQGAQYFSKIDLRSGYHQLKIKE 3138 V+KKD + R+C+DYR LN VTIKNKYPLPRI+DLFDQL+GA FSKIDLRSGYHQL+IKE Sbjct: 885 VEKKDHTQRMCVDYRALNDVTIKNKYPLPRIDDLFDQLKGATVFSKIDLRSGYHQLRIKE 944 Query: 3139 DDIPKTAFRTRLGHYEYLVMPFGLTNAPAAFMDLMNRVFWEYLDKFVIVFIDDILIYXXX 3318 +DIPKTAF TR G +E VM FGLTNAPA FM+LMN+VF EYLDKFV+VFIDDILIY Sbjct: 945 EDIPKTAFTTRYGLFECTVMSFGLTNAPAFFMNLMNKVFMEYLDKFVVVFIDDILIYSRT 1004 Query: 3319 XXXXXXXLKITLQTLQDHQLYAKFSKCEFWLKEVKFLGHVVSSKGVSVDPSKIEAVTSWK 3498 L++ L+ L++HQLYAKFSKCEFWL EVKFLGHV+S+ GV+VDPS +E+VT+WK Sbjct: 1005 KEEHEEHLRLALEKLREHQLYAKFSKCEFWLSEVKFLGHVISAGGVAVDPSNVESVTNWK 1064 Query: 3499 QPTSVAEIRSFLGLAGYYRRFVEGFSMIASPLTRLTQKNVKYEWDDRCEAAFQELKTRLT 3678 QP +V+EIRSFLGLAGYYRRF+E FS IA P+TRL QK+VKY+W + CE +FQELK+RL Sbjct: 1065 QPKTVSEIRSFLGLAGYYRRFIENFSKIAKPMTRLLQKDVKYKWSEECEQSFQELKSRLI 1124 Query: 3679 TAPVLIAPVPGESLVIYTDASGIGLGCVLMQNGKVIAYASRKLKTHEKNYPAHDLELASI 3858 +AP+LI P P + +Y DAS +GLGCVLMQ+GKV+AYASR+L+ HEKNYP HD+ELA++ Sbjct: 1125 SAPILILPDPKKGFQVYCDASKLGLGCVLMQDGKVVAYASRQLRPHEKNYPTHDIELAAV 1184 Query: 3859 VFSLKIWRHYLYGEKFELFSDHKSLKYIFSQKELNMRQRRWMEYLKDYDFTLHYHPGKAN 4038 V +LKIWRHYL+G + E+++DHKSLKYIF+Q +LNMRQRRW+E +KDYD +HYHPGKAN Sbjct: 1185 VHALKIWRHYLFGTRTEVYTDHKSLKYIFTQPDLNMRQRRWLELIKDYDMGIHYHPGKAN 1244 Query: 4039 VVADALSRRKESVLAQMMLSEWHMLESVIEFVFDSPKNEDRQHSYLAPLRLHNTLTQRIV 4218 VV DALSR+ +E L + F+ ++A L TL ++ Sbjct: 1245 VVVDALSRK-----GYCNATEGRQLPLELCKEFERLNLGIVGRGFVAALEAKPTLIDQVR 1299 Query: 4219 ESQNLDADVVEHCLKAGDSENHEWNIHADGSIRFQNRLWIPTDEQLRKDILGEAHRSRYS 4398 E+Q D D+ E + + G++ R+ +P ++ L+ +L EAH + YS Sbjct: 1300 EAQINDPDIQEIKKNMRRGKAIGFLEDEQGTVWLGERICVPDNKDLKDAVLKEAHDTLYS 1359 Query: 4399 IHPGGTKMYRDLRKHFWWPGMKKHIAQYVNRCMTCQQVKAEHQRPAGLLQPLPVAEWKWE 4578 IHPG TKMY+DL++ FWW MK+ IA+YV C CQ+VKAEHQ+PAGLLQPL + EWKWE Sbjct: 1360 IHPGSTKMYQDLKERFWWASMKREIAEYVAVCDVCQRVKAEHQKPAGLLQPLKIPEWKWE 1419 Query: 4579 HVTMDFVTGLPKASDGLDAIWVIVDRLTKSAHFLPIKMTHTVDRLSRLYIAEIVRLHGIP 4758 + MDF+TGLP+ S G D+IWVIVDRLTK AHF+P+K T++ RL+ LY+A IV LHG+P Sbjct: 1420 EIGMDFITGLPRTSSGHDSIWVIVDRLTKVAHFIPVKTTYSGSRLAELYMARIVCLHGVP 1479 Query: 4759 VSIVSDRDPRFTSQFWKSLQSALGTQLKFSTAFHPQTDGQSERVIQILEDMLRACVLDFG 4938 IVSDR +FTS FWK LQ +G++L FSTA+HPQTDGQ+ERV QILEDMLRAC LDFG Sbjct: 1480 KKIVSDRGSQFTSNFWKKLQEEMGSKLNFSTAYHPQTDGQTERVNQILEDMLRACALDFG 1539 Query: 4939 GQWKTHLPLVEFSYNNSFQSSIGMAPFEALYGRPCRSPICWTEVGDTILMGPELVEETTE 5118 G W +LP EFSYNNS+Q+S+ MAP+EALYGR CR+P+ W + G+ + G +++ E E Sbjct: 1540 GSWDKNLPYAEFSYNNSYQASLQMAPYEALYGRKCRTPLLWDQTGERQVFGTDILREAEE 1599 Query: 5119 KIRMVQERIKAAQSRQKNYADKRRRPLEFEVGDMVFLKISPKRGISRFGLKGKLKPRYVG 5298 K++++QER++ AQSR K+YAD RRR L FE GD V+L+++P RG+ RF KGKL PR+VG Sbjct: 1600 KVKVIQERLRVAQSRHKSYADNRRRDLSFEEGDYVYLRVTPLRGVHRFHTKGKLAPRFVG 1659 Query: 5299 PFEITERVGQVAYRLVLPSQLAQIHNVFHVSMLRKYEPDPSHILDWQSLQLEEDVSYEEG 5478 P++I R G+VAY+L LP LA +HNVFHVS L+K P+ + + ++++ED++Y E Sbjct: 1660 PYKIVSRRGEVAYQLELPQSLAGVHNVFHVSQLKKCLRVPTEEANIEQIEVQEDLTYVEK 1719 Query: 5479 PVQIIGRKEKMLRSRVIPLVKV 5544 P++I+ E+ R+RVI KV Sbjct: 1720 PIRILETNERRTRNRVIRFCKV 1741 >gb|ABA95022.1| retrotransposon protein, putative, Ty3-gypsy subclass [Oryza sativa Japonica Group] Length = 1473 Score = 1301 bits (3367), Expect = 0.0 Identities = 671/1402 (47%), Positives = 913/1402 (65%), Gaps = 11/1402 (0%) Frame = +1 Query: 1372 LQNFQRLRPPRFGGSSDPAVVEEWVLRTREILITMQCPRDQWVPVAAFQFDGDASHWWRS 1551 L F +RPP F +++P +W+ + L +QC + V A+ Q G AS WW Sbjct: 60 LAEFLHVRPPVFSSTTNPVEAGDWLHAIEKKLDLLQCTDQEKVSFASHQLHGPASEWWDH 119 Query: 1552 ER-NVLGDGPVEWADFERMFLDRFISETAREIKQQEFSGMVQGNLTVTDYELRFTRLSRY 1728 R N P+ W +F F I +K++EF + QG+ +VT+Y F RL+RY Sbjct: 120 FRLNRTTAEPITWLEFTAAFRKTHIPSGVVSLKKKEFRSLTQGSRSVTEYLHEFNRLARY 179 Query: 1729 ALELIPTDLQKARRFFRGLRPYLRAKMSVIETTNYRDTVSRAQRVEREDMELQTSRRLTS 1908 A E + D ++ +F GL L + + ++++ V +A R E + ++ + Sbjct: 180 APEDVRNDEERQEKFLEGLNDELSYPLMTGDYSDFQKLVDKAIRQEDKYNRMEQKKCRI- 238 Query: 1909 RPQASFPPRADPAKRPMYSRPSASVPTYSQYQTPTPSSYXXXXXXXXXXXXXXLTRQIPR 2088 A F + ++P + S S+P Q + S + Q PR Sbjct: 239 ---AHFKAQQGNNQKPRLTLGSQSMP-----QGGSSSVVRPQRQFFNNNAGNNIRNQAPR 290 Query: 2089 ---SPASQRLIQ----AGPLTCYGCGEAGHMKRNCP---RLXXXXXXXXXXXXRPQGRVY 2238 +PA Q+ ++ + P+ C+ CG+ GH CP R+ + RV Sbjct: 291 PVAAPAQQQPVKREQGSKPVVCFNCGDPGHYADKCPKPRRVKVVPAQSNSTAPASKARVN 350 Query: 2239 ALTHEEYQPSHEVMEGNLILSNMQVHVLIDTGSSNSFISTRLASMLELDVENTGKILSLS 2418 + E Q + +V+ G ++ + VL D+G+++SF+S A ++VE+ + L +S Sbjct: 351 HVAAAEAQDAPDVILGTFPVNLVPATVLFDSGATHSFLSMSFAGNHGMEVEDLRRPLMVS 410 Query: 2419 TPLGNNTIPKSVCKNCVIRLVDQELSTDLILLELNDFDVILGMDWLVRNHAHVDCYSRIV 2598 TP N + + I + +LILLE D DVILGMDWL R+ +DC +R V Sbjct: 411 TP-SNQALSLQRSPSVRIEIKGVPFLANLILLESKDLDVILGMDWLARHKGVIDCANRKV 469 Query: 2599 TFKIPGRPILKFMGFKNRIEKYLKSKLNNLTTEEKAVPELVEIPVVRDFRSLFPEELPGL 2778 T ++ + + L+S+LN +T EE IP+VR++ +FP++LPG+ Sbjct: 470 TLTSNDGQVVTVHALSS---ESLRSRLNQITLEE--------IPIVREYSDVFPDDLPGM 518 Query: 2779 PPIRAIEFSIDLIPGTAPISITPYRMAPAETRELKSQIDELTHLGFIRPSFSPWGAPVLF 2958 PP R IEF IDL+PGT PI PYRMA E E+K Q+D+L G+IRPS SPWGAPV+F Sbjct: 519 PPKRDIEFRIDLVPGTTPIHKRPYRMAANELAEVKRQVDDLLQKGYIRPSSSPWGAPVIF 578 Query: 2959 VKKKDGSFRLCIDYRRLNQVTIKNKYPLPRIEDLFDQLQGAQYFSKIDLRSGYHQLKIKE 3138 V+KKD + R+C+DYR LN VTIKNKYPLPRI+DLFDQL+GA FSKIDLRSGYHQL+IKE Sbjct: 579 VEKKDHTQRMCVDYRALNDVTIKNKYPLPRIDDLFDQLKGATVFSKIDLRSGYHQLRIKE 638 Query: 3139 DDIPKTAFRTRLGHYEYLVMPFGLTNAPAAFMDLMNRVFWEYLDKFVIVFIDDILIYXXX 3318 +DIPKTAF TR G +E VM FGLTNAPA FM+LMN+VF EYLDKFV+VFIDDILIY Sbjct: 639 EDIPKTAFTTRYGLFECTVMSFGLTNAPAFFMNLMNKVFMEYLDKFVVVFIDDILIYSRT 698 Query: 3319 XXXXXXXLKITLQTLQDHQLYAKFSKCEFWLKEVKFLGHVVSSKGVSVDPSKIEAVTSWK 3498 L++ L+ L++HQLYAKFSKCEFWL EVKFLGHV+S+ GV+VDPS +E+VT+WK Sbjct: 699 KEEHEEHLRLALEKLREHQLYAKFSKCEFWLSEVKFLGHVISAGGVAVDPSNVESVTNWK 758 Query: 3499 QPTSVAEIRSFLGLAGYYRRFVEGFSMIASPLTRLTQKNVKYEWDDRCEAAFQELKTRLT 3678 QP +V+EIRSFLGLAGYYRRF+E FS IA P+TRL QK+VKY+W + CE +FQELK+RL Sbjct: 759 QPKTVSEIRSFLGLAGYYRRFIENFSKIAKPMTRLLQKDVKYKWSEECEQSFQELKSRLV 818 Query: 3679 TAPVLIAPVPGESLVIYTDASGIGLGCVLMQNGKVIAYASRKLKTHEKNYPAHDLELASI 3858 +AP+LI P P + +Y DAS +GLGCVLMQ+GKV+AYASR+L+ HEKNYP HDLELA++ Sbjct: 819 SAPILILPNPKKGFQVYCDASKLGLGCVLMQDGKVVAYASRQLRPHEKNYPTHDLELAAV 878 Query: 3859 VFSLKIWRHYLYGEKFELFSDHKSLKYIFSQKELNMRQRRWMEYLKDYDFTLHYHPGKAN 4038 V +LKIWRHYL+G + E+++DHKSLKYIF+Q +LNMRQRRW+E +KDYD +HYHPGKAN Sbjct: 879 VHALKIWRHYLFGTRTEVYTDHKSLKYIFTQPDLNMRQRRWLELIKDYDMGIHYHPGKAN 938 Query: 4039 VVADALSRRKESVLAQMMLSEWHMLESVIEFVFDSPKNEDRQHSYLAPLRLHNTLTQRIV 4218 VVADALSR+ +E L + F+ ++A L TL ++ Sbjct: 939 VVADALSRK-----GYCNATEGRQLPLELCKEFERLNLGIVSRGFVAALEAKPTLIDQVR 993 Query: 4219 ESQNLDADVVEHCLKAGDSENHEWNIHADGSIRFQNRLWIPTDEQLRKDILGEAHRSRYS 4398 E+Q D D+ E + + G++ R+ +P ++ L+ IL EAH + YS Sbjct: 994 EAQINDPDIQEIKKNMRRGKAIGFLEDEQGTVWLGERICVPDNKDLKDAILKEAHDTLYS 1053 Query: 4399 IHPGGTKMYRDLRKHFWWPGMKKHIAQYVNRCMTCQQVKAEHQRPAGLLQPLPVAEWKWE 4578 IHPG TKMY+DL++ FWW MK+ IA+YV C CQ+VKAEHQ+PAGLLQPL + EWKWE Sbjct: 1054 IHPGSTKMYQDLKERFWWASMKREIAEYVAVCDVCQRVKAEHQKPAGLLQPLKIPEWKWE 1113 Query: 4579 HVTMDFVTGLPKASDGLDAIWVIVDRLTKSAHFLPIKMTHTVDRLSRLYIAEIVRLHGIP 4758 + MDF+TGLP+ S G D+IWVIVDRLTK AHF+P+K T++ RL+ LY+A IV LHG+P Sbjct: 1114 EIGMDFITGLPRTSSGHDSIWVIVDRLTKVAHFIPVKTTYSGSRLAELYMARIVCLHGVP 1173 Query: 4759 VSIVSDRDPRFTSQFWKSLQSALGTQLKFSTAFHPQTDGQSERVIQILEDMLRACVLDFG 4938 IVSDR +FTS FWK LQ +G++L FS A+HPQTDGQ+ERV QILEDMLRAC LDFG Sbjct: 1174 KKIVSDRGSQFTSNFWKKLQEEMGSKLNFSIAYHPQTDGQTERVNQILEDMLRACALDFG 1233 Query: 4939 GQWKTHLPLVEFSYNNSFQSSIGMAPFEALYGRPCRSPICWTEVGDTILMGPELVEETTE 5118 G W +LP EFSYNNS+Q+S+ MAP+EALYGR CR+P+ W + G+ + G +++ E E Sbjct: 1234 GSWDKNLPYAEFSYNNSYQASLQMAPYEALYGRKCRTPLLWDQTGERQVFGTDILREAEE 1293 Query: 5119 KIRMVQERIKAAQSRQKNYADKRRRPLEFEVGDMVFLKISPKRGISRFGLKGKLKPRYVG 5298 K++++QER++ AQSR K+YAD RRR L FE G+ V+L+++P RG+ RF KGKL PR+VG Sbjct: 1294 KVKVIQERLRVAQSRHKSYADNRRRDLSFEEGEYVYLRVTPLRGVHRFHTKGKLAPRFVG 1353 Query: 5299 PFEITERVGQVAYRLVLPSQLAQIHNVFHVSMLRKYEPDPSHILDWQSLQLEEDVSYEEG 5478 P++I R G+VAY+L LP LA +HNVFHVS L+K P+ + + ++++ED++Y E Sbjct: 1354 PYKIVSRRGEVAYQLELPQSLAGVHNVFHVSQLKKCLRVPTEEANIEQIEVQEDLTYVEK 1413 Query: 5479 PVQIIGRKEKMLRSRVIPLVKV 5544 P++I+ E+ R+RVI KV Sbjct: 1414 PIRILETNERRTRNRVIRFCKV 1435 >dbj|BAH79971.1| hypothetical protein [Oryza sativa Indica Group] Length = 1477 Score = 1301 bits (3367), Expect = 0.0 Identities = 674/1404 (48%), Positives = 912/1404 (64%), Gaps = 13/1404 (0%) Frame = +1 Query: 1372 LQNFQRLRPPRFGGSSDPAVVEEWVLRTREILITMQCPRDQWVPVAAFQFDGDASHWWRS 1551 L F R+RPP F +S+P +W+ + L +QC + V A+ Q G AS WW Sbjct: 63 LAEFLRVRPPVFSSTSNPVEASDWLHAIEKKLDLLQCTDQEKVSFASHQLHGPASEWWDH 122 Query: 1552 ER-NVLGDGPVEWADFERMFLDRFISETAREIKQQEFSGMVQGNLTVTDYELRFTRLSRY 1728 R N P W +F F I +K++EF + QG+ +VT+Y F RL+RY Sbjct: 123 FRLNRTTAEPTTWLEFTAAFRKTHIPSGVVSLKKKEFRSLTQGSRSVTEYLHEFNRLARY 182 Query: 1729 ALELIPTDLQKARRFFRGLRPYLRAKMSVIETTNYRDTVSRAQRVE-REDMELQTSRRLT 1905 A E + D ++ +F GL L + V + +++ V +A R E + + Q RR+ Sbjct: 183 APEDVRNDEERQEKFLGGLNDELSYPLMVGDYPDFQKLVDKAIRQEDKYNFMEQKKRRI- 241 Query: 1906 SRPQASFPPRADPAKRPMYSRPSASVPTYSQYQTPTPSSYXXXXXXXXXXXXXXLTRQIP 2085 A F + ++P + S+P Q + S + Q P Sbjct: 242 ----AQFKAQQGNNQKPRLTLGPQSMP-----QGGSSSVVRPQRQFFNNNAGNNIRNQAP 292 Query: 2086 RSPASQRLIQ--------AGPLTCYGCGEAGHMKRNCP---RLXXXXXXXXXXXXRPQGR 2232 R A+ Q + P+ C+ CG++GH CP R+ + R Sbjct: 293 RPVAAPAQHQQFAKREQGSKPVVCFNCGDSGHYADKCPKPRRVKVVPVQSNSVVPVSKAR 352 Query: 2233 VYALTHEEYQPSHEVMEGNLILSNMQVHVLIDTGSSNSFISTRLASMLELDVENTGKILS 2412 V + E Q + +++ G ++++ VL D+G+++SF+S A ++VE+ + L Sbjct: 353 VNHVAAAEAQDAPDMILGTFPVNSVPATVLFDSGATHSFLSLSFAGNHGMEVEDLRRPLM 412 Query: 2413 LSTPLGNNTIPKSVCKNCVIRLVDQELSTDLILLELNDFDVILGMDWLVRNHAHVDCYSR 2592 +STP N + + I + +LILLE D DVILGMDWL R+ +DC ++ Sbjct: 413 VSTP-SNQALSLQRSPSVRIEIQGVPFLANLILLESKDLDVILGMDWLTRHKGVIDCANK 471 Query: 2593 IVTFKIPGRPILKFMGFKNRIEKYLKSKLNNLTTEEKAVPELVEIPVVRDFRSLFPEELP 2772 VT ++ + + L+S+LN +T EE IP+VR++ +FP++LP Sbjct: 472 KVTLTSNDGRVVTVQALSS---ESLRSRLNQITLEE--------IPIVREYPDVFPDDLP 520 Query: 2773 GLPPIRAIEFSIDLIPGTAPISITPYRMAPAETRELKSQIDELTHLGFIRPSFSPWGAPV 2952 G+PP R IEF IDL+PGT PI PYRMA E E+K Q+D+L G+IRPS SPWGAPV Sbjct: 521 GMPPKRDIEFRIDLVPGTTPIHKRPYRMAANELAEVKRQVDDLLQKGYIRPSSSPWGAPV 580 Query: 2953 LFVKKKDGSFRLCIDYRRLNQVTIKNKYPLPRIEDLFDQLQGAQYFSKIDLRSGYHQLKI 3132 +FV+KKD + R+C+DYR LN VTIKNKYPLPRI+DLFDQL+GA FSKIDLRSGYHQL+I Sbjct: 581 IFVEKKDHTQRMCVDYRALNDVTIKNKYPLPRIDDLFDQLKGATVFSKIDLRSGYHQLRI 640 Query: 3133 KEDDIPKTAFRTRLGHYEYLVMPFGLTNAPAAFMDLMNRVFWEYLDKFVIVFIDDILIYX 3312 KE+DIPKTAF TR G +E VM FGLTNAPA FM+LMN+VF EYLDKFV+VFIDDILIY Sbjct: 641 KEEDIPKTAFTTRYGLFECTVMSFGLTNAPAFFMNLMNKVFMEYLDKFVVVFIDDILIYS 700 Query: 3313 XXXXXXXXXLKITLQTLQDHQLYAKFSKCEFWLKEVKFLGHVVSSKGVSVDPSKIEAVTS 3492 L++ L+ L++HQLYAKFSKCEFWL EVKFLGHV+S+ GV+VDPS +E+VT+ Sbjct: 701 RTKEEHEEHLRLALEKLREHQLYAKFSKCEFWLSEVKFLGHVISAGGVAVDPSNVESVTN 760 Query: 3493 WKQPTSVAEIRSFLGLAGYYRRFVEGFSMIASPLTRLTQKNVKYEWDDRCEAAFQELKTR 3672 WKQP +V+EIRSFLGLAGYYRRF+E FS IA P+TRL QK+VKY+W CE +FQELK+R Sbjct: 761 WKQPKTVSEIRSFLGLAGYYRRFIENFSKIAKPMTRLLQKDVKYKWSQECEQSFQELKSR 820 Query: 3673 LTTAPVLIAPVPGESLVIYTDASGIGLGCVLMQNGKVIAYASRKLKTHEKNYPAHDLELA 3852 L +AP+LI P P + +Y DAS +GLGCVLMQ+GKV+AYASR+L+ HEKNYP HDLELA Sbjct: 821 LVSAPILILPDPKKGFQVYCDASKLGLGCVLMQDGKVVAYASRQLRPHEKNYPTHDLELA 880 Query: 3853 SIVFSLKIWRHYLYGEKFELFSDHKSLKYIFSQKELNMRQRRWMEYLKDYDFTLHYHPGK 4032 ++V +LKIWRHYL+G + E+++DHKSLKYIF+Q +LNMRQRRW+E +KDYD +HYHPGK Sbjct: 881 AVVHALKIWRHYLFGTRTEVYTDHKSLKYIFTQPDLNMRQRRWLELIKDYDMGIHYHPGK 940 Query: 4033 ANVVADALSRRKESVLAQMMLSEWHMLESVIEFVFDSPKNEDRQHSYLAPLRLHNTLTQR 4212 ANVVADALSR+ ++E L + F+ ++A L TL + Sbjct: 941 ANVVADALSRK-----GYCNVTEGRQLPMELCKEFERLNLGIISRGFVAALEAKPTLIDQ 995 Query: 4213 IVESQNLDADVVEHCLKAGDSENHEWNIHADGSIRFQNRLWIPTDEQLRKDILGEAHRSR 4392 + E+Q D D+ E + + G++ R+ +P ++ L+ IL EAH + Sbjct: 996 VREAQINDPDIQEIKKNMRRGKAIGFLEDEQGTVWLGERICVPDNKDLKDAILKEAHDTL 1055 Query: 4393 YSIHPGGTKMYRDLRKHFWWPGMKKHIAQYVNRCMTCQQVKAEHQRPAGLLQPLPVAEWK 4572 YSIHPG TKMY+DL++ FWW MK+ IA+YV C CQ+VKAEHQ+PAGLLQPL + EWK Sbjct: 1056 YSIHPGSTKMYQDLKERFWWASMKRKIAEYVAVCDVCQRVKAEHQKPAGLLQPLKIPEWK 1115 Query: 4573 WEHVTMDFVTGLPKASDGLDAIWVIVDRLTKSAHFLPIKMTHTVDRLSRLYIAEIVRLHG 4752 WE + MDF+TGLP+ S G D+IWVIVDRLTK AHF+P+K T++ RL+ LY+A IV LHG Sbjct: 1116 WEEIGMDFITGLPRTSSGHDSIWVIVDRLTKVAHFIPVKTTYSGSRLAELYMARIVCLHG 1175 Query: 4753 IPVSIVSDRDPRFTSQFWKSLQSALGTQLKFSTAFHPQTDGQSERVIQILEDMLRACVLD 4932 +P IVSDR +FTS FWK LQ +G++L FSTA+HPQTDGQ+ERV QILEDMLRAC LD Sbjct: 1176 VPKKIVSDRGSQFTSNFWKKLQEEMGSKLNFSTAYHPQTDGQTERVNQILEDMLRACALD 1235 Query: 4933 FGGQWKTHLPLVEFSYNNSFQSSIGMAPFEALYGRPCRSPICWTEVGDTILMGPELVEET 5112 FGG W +LP EFSYNNS+Q+S+ MAP+EALYGR CR+P+ W + G+ + G +++ E Sbjct: 1236 FGGSWDKNLPYAEFSYNNSYQASLQMAPYEALYGRKCRTPLLWDQTGERQVFGTDILREA 1295 Query: 5113 TEKIRMVQERIKAAQSRQKNYADKRRRPLEFEVGDMVFLKISPKRGISRFGLKGKLKPRY 5292 EK++++QER++ AQSR K+YAD RRR L FE GD V+L+++P RG+ RF KGKL PR+ Sbjct: 1296 EEKVKIIQERLRVAQSRHKSYADNRRRDLSFEEGDYVYLRVTPLRGVHRFRTKGKLAPRF 1355 Query: 5293 VGPFEITERVGQVAYRLVLPSQLAQIHNVFHVSMLRKYEPDPSHILDWQSLQLEEDVSYE 5472 VGP++I R G+VAY+L LP LA +HNV HVS L+K P+ + + ++++ED++Y Sbjct: 1356 VGPYKIVSRRGEVAYQLELPQSLAGVHNVSHVSQLKKCLRVPTEEANIEQIEVQEDLTYV 1415 Query: 5473 EGPVQIIGRKEKMLRSRVIPLVKV 5544 E P++I+ E+ R+RVI KV Sbjct: 1416 EKPIRILETSERRTRNRVIRFCKV 1439 >dbj|BAH80069.1| putative retrotransposon protein [Oryza sativa Indica Group] Length = 1475 Score = 1300 bits (3365), Expect = 0.0 Identities = 671/1402 (47%), Positives = 910/1402 (64%), Gaps = 11/1402 (0%) Frame = +1 Query: 1372 LQNFQRLRPPRFGGSSDPAVVEEWVLRTREILITMQCPRDQWVPVAAFQFDGDASHWWRS 1551 L F R+RPP F +++P +W+ + L +QC + V A+ Q G AS WW Sbjct: 62 LAEFLRVRPPVFSSTTNPVEAGDWLHAIEKKLDLLQCTDQEKVSFASHQLHGPASEWWDH 121 Query: 1552 ER-NVLGDGPVEWADFERMFLDRFISETAREIKQQEFSGMVQGNLTVTDYELRFTRLSRY 1728 R N P+ W +F F I +K++EF + QG+ +VT+Y F RL+RY Sbjct: 122 FRLNRTTAEPITWLEFAAAFRKTHIPSGVMSLKKKEFRSLTQGSRSVTEYLHEFNRLARY 181 Query: 1729 ALELIPTDLQKARRFFRGLRPYLRAKMSVIETTNYRDTVSRAQRVEREDMELQTSRRLTS 1908 A E + D ++ +F GL L + V + +++ V +A R E + ++ +R Sbjct: 182 APEDVRNDEERQEKFLGGLNDELSYPLMVGDYPDFQKLVDKAIRQEDKYNFMEQKKRR-- 239 Query: 1909 RPQASFPPRADPAKRPMYSRPSASVPTYSQYQTPTPSSYXXXXXXXXXXXXXXLTRQIPR 2088 A F + ++P + S+P P + Q PR Sbjct: 240 --MAQFKAQQGSNQKPRLTFGPQSMPHGGSSSVVRPQRQFFNNNVGNN-----IRNQAPR 292 Query: 2089 ---SPASQRLIQ----AGPLTCYGCGEAGHMKRNCP---RLXXXXXXXXXXXXRPQGRVY 2238 +PA Q+ + + P+ C+ CG+ GH CP R+ + RV Sbjct: 293 PVATPAQQQPAKREQGSKPVVCFNCGDPGHYADKCPKPRRVKVVPVQNNSAVPASKARVN 352 Query: 2239 ALTHEEYQPSHEVMEGNLILSNMQVHVLIDTGSSNSFISTRLASMLELDVENTGKILSLS 2418 + E Q + +V+ G ++++ VL D+G+++SF+S A ++VE+ + L +S Sbjct: 353 HVAAAEAQDAPDVILGTFPVNSVPATVLFDSGATHSFLSMSFAGNHGMEVEDLRRPLMVS 412 Query: 2419 TPLGNNTIPKSVCKNCVIRLVDQELSTDLILLELNDFDVILGMDWLVRNHAHVDCYSRIV 2598 TP N + + I + +LILL+ D DVILGMDWL R+ +DC +R V Sbjct: 413 TP-SNQALSLQRSPSVRIEIQGVPFLANLILLKSKDLDVILGMDWLARHKGVIDCANRKV 471 Query: 2599 TFKIPGRPILKFMGFKNRIEKYLKSKLNNLTTEEKAVPELVEIPVVRDFRSLFPEELPGL 2778 T ++ + L+S+LN +T EE IP+VR++ +FP++LPG+ Sbjct: 472 TLTSNDGQVVTVHALST---ESLRSRLNQITLEE--------IPIVREYPDVFPDDLPGM 520 Query: 2779 PPIRAIEFSIDLIPGTAPISITPYRMAPAETRELKSQIDELTHLGFIRPSFSPWGAPVLF 2958 PP R IEF IDL+PGT PI PYRMA E E+K Q+D+L G+IRPS SPWGAPV+F Sbjct: 521 PPKRDIEFRIDLVPGTTPIHKRPYRMAANELAEVKRQVDDLLQKGYIRPSSSPWGAPVIF 580 Query: 2959 VKKKDGSFRLCIDYRRLNQVTIKNKYPLPRIEDLFDQLQGAQYFSKIDLRSGYHQLKIKE 3138 V+KKD + R+C+DYR LN VTIKNKYPLPRI+DLFDQL+GA FSKIDLRSGYHQL+IKE Sbjct: 581 VEKKDHTQRMCVDYRALNDVTIKNKYPLPRIDDLFDQLKGATVFSKIDLRSGYHQLRIKE 640 Query: 3139 DDIPKTAFRTRLGHYEYLVMPFGLTNAPAAFMDLMNRVFWEYLDKFVIVFIDDILIYXXX 3318 +DIPKTAF TR G +E VM FGLTNAPA FM+LMN+VF EYLDKFV+VFIDDILIY Sbjct: 641 EDIPKTAFTTRYGLFECTVMSFGLTNAPAFFMNLMNKVFMEYLDKFVVVFIDDILIYSRT 700 Query: 3319 XXXXXXXLKITLQTLQDHQLYAKFSKCEFWLKEVKFLGHVVSSKGVSVDPSKIEAVTSWK 3498 L++ L+ L++HQLYAKFSKCEFWL EVKFLGHV+S+ GV+VDPS +E+VT+WK Sbjct: 701 KEEHEEHLRLALEKLREHQLYAKFSKCEFWLSEVKFLGHVISAGGVAVDPSNVESVTNWK 760 Query: 3499 QPTSVAEIRSFLGLAGYYRRFVEGFSMIASPLTRLTQKNVKYEWDDRCEAAFQELKTRLT 3678 QP +V+EIRSFLGLAGYYRRF+E FS IA P+TRL QK+VKY+W + CE +FQELK RL Sbjct: 761 QPKTVSEIRSFLGLAGYYRRFIENFSKIAKPMTRLLQKDVKYKWSEECEQSFQELKNRLV 820 Query: 3679 TAPVLIAPVPGESLVIYTDASGIGLGCVLMQNGKVIAYASRKLKTHEKNYPAHDLELASI 3858 +AP+LI P P + +Y DAS +GLGCVLMQ+GKV+AYASR+L+ HEKNYP HDLELA++ Sbjct: 821 SAPILILPDPKKGFQVYCDASKLGLGCVLMQDGKVVAYASRQLRPHEKNYPTHDLELAAV 880 Query: 3859 VFSLKIWRHYLYGEKFELFSDHKSLKYIFSQKELNMRQRRWMEYLKDYDFTLHYHPGKAN 4038 V +LKIWRHYL+G + E+++DHKSLKYIF+Q +LNMRQRRW+E +KDYD +HYHPGKAN Sbjct: 881 VHALKIWRHYLFGTRTEVYTDHKSLKYIFTQPDLNMRQRRWLELIKDYDMGIHYHPGKAN 940 Query: 4039 VVADALSRRKESVLAQMMLSEWHMLESVIEFVFDSPKNEDRQHSYLAPLRLHNTLTQRIV 4218 VVADALSR+ +E L + F+ ++A L TL ++ Sbjct: 941 VVADALSRK-----GYCNATEGRQLPLELCKEFERLNLGIVSRGFVAALEAKPTLIDQVR 995 Query: 4219 ESQNLDADVVEHCLKAGDSENHEWNIHADGSIRFQNRLWIPTDEQLRKDILGEAHRSRYS 4398 E+Q D D+ E + + G++ R+ +P ++ L+ IL EAH + YS Sbjct: 996 EAQINDPDIQEIKKNMRRGKAIGFLEDEQGTVWLGERICVPDNKDLKDAILKEAHDTLYS 1055 Query: 4399 IHPGGTKMYRDLRKHFWWPGMKKHIAQYVNRCMTCQQVKAEHQRPAGLLQPLPVAEWKWE 4578 IHPG TKMY+DL++ FWW MK+ IA+YV C CQ+VKAEHQ+PAGLLQPL + EWKWE Sbjct: 1056 IHPGSTKMYQDLKERFWWASMKREIAEYVAVCDVCQRVKAEHQKPAGLLQPLKIPEWKWE 1115 Query: 4579 HVTMDFVTGLPKASDGLDAIWVIVDRLTKSAHFLPIKMTHTVDRLSRLYIAEIVRLHGIP 4758 + MDF+TGLP+ S G D+IWVIVDRLTK AHF+P+K T++ RL+ LY+A IV LHG+P Sbjct: 1116 EIGMDFITGLPRTSSGHDSIWVIVDRLTKVAHFIPVKTTYSGSRLAELYMARIVCLHGVP 1175 Query: 4759 VSIVSDRDPRFTSQFWKSLQSALGTQLKFSTAFHPQTDGQSERVIQILEDMLRACVLDFG 4938 IVSDR +FTS FWK LQ +G++L FSTA+HPQTDGQ+ERV QILEDMLRAC LDFG Sbjct: 1176 KKIVSDRGSQFTSNFWKKLQEEMGSKLNFSTAYHPQTDGQTERVNQILEDMLRACALDFG 1235 Query: 4939 GQWKTHLPLVEFSYNNSFQSSIGMAPFEALYGRPCRSPICWTEVGDTILMGPELVEETTE 5118 G W +LP EFSYNNS+Q+S+ MAP+EALYGR CR+P+ W + G+ + G +++ E Sbjct: 1236 GSWDKNLPYAEFSYNNSYQASLQMAPYEALYGRKCRTPLLWDQTGERQVFGTDILRGAEE 1295 Query: 5119 KIRMVQERIKAAQSRQKNYADKRRRPLEFEVGDMVFLKISPKRGISRFGLKGKLKPRYVG 5298 K++++QER++ AQSR K+YAD RRR L FE GD V+L+++P RG+ RF KGKL PR+VG Sbjct: 1296 KVKIIQERLRVAQSRHKSYADNRRRDLSFEEGDYVYLRVTPLRGVHRFHTKGKLAPRFVG 1355 Query: 5299 PFEITERVGQVAYRLVLPSQLAQIHNVFHVSMLRKYEPDPSHILDWQSLQLEEDVSYEEG 5478 P++I R G+VAY+L LP LA +H+VFHVS L+K P+ + + ++++ED++Y E Sbjct: 1356 PYKIVSRRGEVAYQLELPQSLAGVHDVFHVSQLKKCLRVPTEEANIEQIEVQEDLTYVEK 1415 Query: 5479 PVQIIGRKEKMLRSRVIPLVKV 5544 P++I+ E+ R+RVI KV Sbjct: 1416 PIRILETSERRTRNRVIRFCKV 1437 >gb|ABB46774.2| retrotransposon protein, putative, Ty3-gypsy subclass [Oryza sativa Japonica Group] Length = 1695 Score = 1300 bits (3365), Expect = 0.0 Identities = 670/1404 (47%), Positives = 912/1404 (64%), Gaps = 13/1404 (0%) Frame = +1 Query: 1372 LQNFQRLRPPRFGGSSDPAVVEEWVLRTREILITMQCPRDQWVPVAAFQFDGDASHWWRS 1551 L F R+RPP F +++P +W+ + L +QC + V A+ Q G AS WW Sbjct: 282 LAEFLRVRPPVFSSTTNPVEAGDWLHAIEKKLDLLQCTDQEKVSFASHQLHGPASEWWDH 341 Query: 1552 ER-NVLGDGPVEWADFERMFLDRFISETAREIKQQEFSGMVQGNLTVTDYELRFTRLSRY 1728 R N P+ W +F F I +K++EF + QG+ +VT+Y F RL+RY Sbjct: 342 FRLNRTTAEPITWLEFTAAFRKTHIPSGVVSLKKKEFRSLTQGSRSVTEYLHEFNRLARY 401 Query: 1729 ALELIPTDLQKARRFFRGLRPYLRAKMSVIETTNYRDTVSRAQRVEREDMELQTSRRLTS 1908 A E + D ++ +F GL L + + ++++ V +A E + ++ +R Sbjct: 402 APEDVRNDEERQEKFLEGLNDELSYPLMTEDYSDFQKLVDKAIHQEDKYNRMEQKKRRI- 460 Query: 1909 RPQASFPPRADPAKRPMYSRPSASVPTYSQYQTPTPSSYXXXXXXXXXXXXXXLTRQIPR 2088 A F + ++P + S+P P + Q PR Sbjct: 461 ---AHFKAQQGNNQKPRLTLGPQSMPHGGSSSVVRPQHQFFNNNAGNN-----IRNQAPR 512 Query: 2089 SPASQRLIQAG-------PLTCYGCGEAGHMKRNCPR---LXXXXXXXXXXXXRPQGRVY 2238 A+ Q P+ C+ CG+ GH CP+ + + RV Sbjct: 513 PVAASTQQQPAKREQGSKPVVCFNCGDPGHYADKCPKPRHVKVVPAQSNSAVPASKARVN 572 Query: 2239 ALTHEEYQPSHEVMEGNLILSNMQVHVLIDTGSSNSFISTRLASMLELDVENTGKILSLS 2418 + E Q + +V+ G +++++ VL D+G+++SF+S A ++VE+ L +S Sbjct: 573 HVAAAEAQDAPDVILGTFLVNSVPATVLFDSGATHSFLSMSFAGNHGMEVEDLRCPLMVS 632 Query: 2419 TPLGNNTIPKSVCKNCVIRLVDQELSTDLILLELNDFDVILGMDWLVRNHAHVDCYSRIV 2598 TP N + + I + +LILLE D DVILGMDWL R+ +DC +R V Sbjct: 633 TP-SNQALSLQRSPSVRIEIQGVPFLANLILLESKDLDVILGMDWLARHKGVIDCANRKV 691 Query: 2599 TFKIPGRPILKFMGFKNRIEKYLKSKLNNLTTEEKAVPELVEIPVVRDFRSLFPEELPGL 2778 T ++ + ++L+S+LN +T EE IP+VR + +FP++LPG+ Sbjct: 692 TLTSNDGRVVTVHALSS---EFLRSRLNQITLEE--------IPIVRGYPDVFPDDLPGM 740 Query: 2779 PPIRAIEFSIDLIPGTAPISITPYRMAPAETRELKSQIDELTHLGFIRPSFSPWGAPVLF 2958 PP R IEF DL+PGT PI PYRMA E E+K Q+D+L G+IRPS SPWGAPV+F Sbjct: 741 PPKRDIEFRKDLVPGTTPIHKRPYRMAANELAEVKRQVDDLLQKGYIRPSSSPWGAPVIF 800 Query: 2959 VKKKDGSFRLCIDYRRLNQVTIKNKYPLPRIEDLFDQLQGAQYFSKIDLRSGYHQLKIKE 3138 V+KKD + R+C+DYR LN VTIKNKYPLPRI+DLFDQL+GA FSKIDLRSGYHQL+IKE Sbjct: 801 VEKKDHTQRMCVDYRALNDVTIKNKYPLPRIDDLFDQLKGATVFSKIDLRSGYHQLRIKE 860 Query: 3139 DDIPKTAFRTRLGHYEYLVMPFGLTNAPAAFMDLMNRVFWEYLDKFVIVFIDDILIYXXX 3318 +DIPKTAF TR G +E VM FGLTNAPA FM+LMN+VF EYLDKFV+VFIDDILIY Sbjct: 861 EDIPKTAFTTRYGLFECTVMSFGLTNAPAFFMNLMNKVFMEYLDKFVVVFIDDILIYSKT 920 Query: 3319 XXXXXXXLKITLQTLQDHQLYAKFSKCEFWLKEVKFLGHVVSSKGVSVDPSKIEAVTSWK 3498 L++ L+ L++HQLYAKFSKCEFWL EVKFLGHV+S+ GV+VDPS +E+VT+WK Sbjct: 921 KEEHEEHLRLALEKLREHQLYAKFSKCEFWLSEVKFLGHVISAGGVAVDPSNVESVTNWK 980 Query: 3499 QPTSVAEIRSFLGLAGYYRRFVEGFSMIASPLTRLTQKNVKYEWDDRCEAAFQELKTRLT 3678 QP +V+EIRSFLGLAGYYR+F+E FS IA P+TRL QK+VKY+W + CE +FQELK RL Sbjct: 981 QPKTVSEIRSFLGLAGYYRKFIENFSKIAKPMTRLFQKDVKYKWSEECEQSFQELKNRLI 1040 Query: 3679 TAPVLIAPVPGESLVIYTDASGIGLGCVLMQNGKVIAYASRKLKTHEKNYPAHDLELASI 3858 +AP+LI P P + +Y DAS +GLGCVLMQ+GKV+AYASR+L+ HEKNYP HDLELA++ Sbjct: 1041 SAPILILPDPKKGFQVYCDASKLGLGCVLMQDGKVVAYASRQLRPHEKNYPTHDLELAAV 1100 Query: 3859 VFSLKIWRHYLYGEKFELFSDHKSLKYIFSQKELNMRQRRWMEYLKDYDFTLHYHPGKAN 4038 V +LKIWRHYL+G + E+++DHKSLKYIF+Q +LNMRQRRW+E +KDYD +HYHPGKAN Sbjct: 1101 VHALKIWRHYLFGTRTEVYTDHKSLKYIFTQPDLNMRQRRWLELIKDYDMGIHYHPGKAN 1160 Query: 4039 VVADALSRRKESVLAQMMLSEWHMLESVIEFVFDSPKNEDRQHSYLAPLRLHNTLTQRIV 4218 VVADALSR+ +E L + F+ ++A L TL ++ Sbjct: 1161 VVADALSRK-----GYCNATEGRQLPLELCKEFERLNLGIVSIGFVAALEAKPTLIDQVR 1215 Query: 4219 ESQNLDADV--VEHCLKAGDSENHEWNIHADGSIRFQNRLWIPTDEQLRKDILGEAHRSR 4392 E+Q D D+ ++ ++ G + + H G++ R+ +P ++ L+ IL EAH + Sbjct: 1216 EAQTNDPDIQEIKKNMRRGKAIGFLEDEH--GTVWLGERICVPDNKDLKDAILKEAHDTL 1273 Query: 4393 YSIHPGGTKMYRDLRKHFWWPGMKKHIAQYVNRCMTCQQVKAEHQRPAGLLQPLPVAEWK 4572 YSIHPG TKMY+DL++ FWW MK+ IA+YV C CQ+VKAEHQ+PAGLLQPL + EWK Sbjct: 1274 YSIHPGSTKMYQDLKERFWWASMKREIAEYVAVCDVCQRVKAEHQKPAGLLQPLKIPEWK 1333 Query: 4573 WEHVTMDFVTGLPKASDGLDAIWVIVDRLTKSAHFLPIKMTHTVDRLSRLYIAEIVRLHG 4752 WE + MDF+TGLPK S G D+IWVIVDRLTK AHF+P+K T++ RL+ LY+A IV LHG Sbjct: 1334 WEEIGMDFITGLPKTSLGHDSIWVIVDRLTKVAHFIPVKTTYSGSRLAELYMARIVCLHG 1393 Query: 4753 IPVSIVSDRDPRFTSQFWKSLQSALGTQLKFSTAFHPQTDGQSERVIQILEDMLRACVLD 4932 +P IVSDR +FTS FWK LQ +G++L FSTA+HPQTDGQ+ERV QILEDMLRAC LD Sbjct: 1394 VPKKIVSDRGSQFTSNFWKKLQEEMGSKLNFSTAYHPQTDGQTERVNQILEDMLRACALD 1453 Query: 4933 FGGQWKTHLPLVEFSYNNSFQSSIGMAPFEALYGRPCRSPICWTEVGDTILMGPELVEET 5112 FGG W +LP EFSYNNS+Q+S+ MAP+EALYGR CR+P+ W + G+ + G +++ E Sbjct: 1454 FGGSWDKNLPYAEFSYNNSYQASLQMAPYEALYGRKCRTPLLWDQTGERQVFGTDILREA 1513 Query: 5113 TEKIRMVQERIKAAQSRQKNYADKRRRPLEFEVGDMVFLKISPKRGISRFGLKGKLKPRY 5292 EK++++QER++ AQSR K+YAD RRR L FE GD V+L+++P RG+ RF KGKL PR+ Sbjct: 1514 EEKVKIIQERLRVAQSRHKSYADNRRRDLSFEEGDYVYLRVTPLRGVHRFHTKGKLVPRF 1573 Query: 5293 VGPFEITERVGQVAYRLVLPSQLAQIHNVFHVSMLRKYEPDPSHILDWQSLQLEEDVSYE 5472 VGP++I R G+VAY+L LP LA++HNVFHVS L+K P+ + + ++++ED++Y Sbjct: 1574 VGPYKIVSRRGEVAYQLELPQSLAEVHNVFHVSQLKKCLRVPTEEANLEQIEVQEDLTYV 1633 Query: 5473 EGPVQIIGRKEKMLRSRVIPLVKV 5544 E P++I+ E+ R+RVI KV Sbjct: 1634 EKPIRILETNERRTRNRVIRFCKV 1657 >gb|AAM14695.1|AC097446_24 Putative polyprotein [Oryza sativa Japonica Group] Length = 1680 Score = 1300 bits (3365), Expect = 0.0 Identities = 670/1404 (47%), Positives = 912/1404 (64%), Gaps = 13/1404 (0%) Frame = +1 Query: 1372 LQNFQRLRPPRFGGSSDPAVVEEWVLRTREILITMQCPRDQWVPVAAFQFDGDASHWWRS 1551 L F R+RPP F +++P +W+ + L +QC + V A+ Q G AS WW Sbjct: 267 LAEFLRVRPPVFSSTTNPVEAGDWLHAIEKKLDLLQCTDQEKVSFASHQLHGPASEWWDH 326 Query: 1552 ER-NVLGDGPVEWADFERMFLDRFISETAREIKQQEFSGMVQGNLTVTDYELRFTRLSRY 1728 R N P+ W +F F I +K++EF + QG+ +VT+Y F RL+RY Sbjct: 327 FRLNRTTAEPITWLEFTAAFRKTHIPSGVVSLKKKEFRSLTQGSRSVTEYLHEFNRLARY 386 Query: 1729 ALELIPTDLQKARRFFRGLRPYLRAKMSVIETTNYRDTVSRAQRVEREDMELQTSRRLTS 1908 A E + D ++ +F GL L + + ++++ V +A E + ++ +R Sbjct: 387 APEDVRNDEERQEKFLEGLNDELSYPLMTEDYSDFQKLVDKAIHQEDKYNRMEQKKRRI- 445 Query: 1909 RPQASFPPRADPAKRPMYSRPSASVPTYSQYQTPTPSSYXXXXXXXXXXXXXXLTRQIPR 2088 A F + ++P + S+P P + Q PR Sbjct: 446 ---AHFKAQQGNNQKPRLTLGPQSMPHGGSSSVVRPQHQFFNNNAGNN-----IRNQAPR 497 Query: 2089 SPASQRLIQAG-------PLTCYGCGEAGHMKRNCPR---LXXXXXXXXXXXXRPQGRVY 2238 A+ Q P+ C+ CG+ GH CP+ + + RV Sbjct: 498 PVAASTQQQPAKREQGSKPVVCFNCGDPGHYADKCPKPRHVKVVPAQSNSAVPASKARVN 557 Query: 2239 ALTHEEYQPSHEVMEGNLILSNMQVHVLIDTGSSNSFISTRLASMLELDVENTGKILSLS 2418 + E Q + +V+ G +++++ VL D+G+++SF+S A ++VE+ L +S Sbjct: 558 HVAAAEAQDAPDVILGTFLVNSVPATVLFDSGATHSFLSMSFAGNHGMEVEDLRCPLMVS 617 Query: 2419 TPLGNNTIPKSVCKNCVIRLVDQELSTDLILLELNDFDVILGMDWLVRNHAHVDCYSRIV 2598 TP N + + I + +LILLE D DVILGMDWL R+ +DC +R V Sbjct: 618 TP-SNQALSLQRSPSVRIEIQGVPFLANLILLESKDLDVILGMDWLARHKGVIDCANRKV 676 Query: 2599 TFKIPGRPILKFMGFKNRIEKYLKSKLNNLTTEEKAVPELVEIPVVRDFRSLFPEELPGL 2778 T ++ + ++L+S+LN +T EE IP+VR + +FP++LPG+ Sbjct: 677 TLTSNDGRVVTVHALSS---EFLRSRLNQITLEE--------IPIVRGYPDVFPDDLPGM 725 Query: 2779 PPIRAIEFSIDLIPGTAPISITPYRMAPAETRELKSQIDELTHLGFIRPSFSPWGAPVLF 2958 PP R IEF DL+PGT PI PYRMA E E+K Q+D+L G+IRPS SPWGAPV+F Sbjct: 726 PPKRDIEFRKDLVPGTTPIHKRPYRMAANELAEVKRQVDDLLQKGYIRPSSSPWGAPVIF 785 Query: 2959 VKKKDGSFRLCIDYRRLNQVTIKNKYPLPRIEDLFDQLQGAQYFSKIDLRSGYHQLKIKE 3138 V+KKD + R+C+DYR LN VTIKNKYPLPRI+DLFDQL+GA FSKIDLRSGYHQL+IKE Sbjct: 786 VEKKDHTQRMCVDYRALNDVTIKNKYPLPRIDDLFDQLKGATVFSKIDLRSGYHQLRIKE 845 Query: 3139 DDIPKTAFRTRLGHYEYLVMPFGLTNAPAAFMDLMNRVFWEYLDKFVIVFIDDILIYXXX 3318 +DIPKTAF TR G +E VM FGLTNAPA FM+LMN+VF EYLDKFV+VFIDDILIY Sbjct: 846 EDIPKTAFTTRYGLFECTVMSFGLTNAPAFFMNLMNKVFMEYLDKFVVVFIDDILIYSKT 905 Query: 3319 XXXXXXXLKITLQTLQDHQLYAKFSKCEFWLKEVKFLGHVVSSKGVSVDPSKIEAVTSWK 3498 L++ L+ L++HQLYAKFSKCEFWL EVKFLGHV+S+ GV+VDPS +E+VT+WK Sbjct: 906 KEEHEEHLRLALEKLREHQLYAKFSKCEFWLSEVKFLGHVISAGGVAVDPSNVESVTNWK 965 Query: 3499 QPTSVAEIRSFLGLAGYYRRFVEGFSMIASPLTRLTQKNVKYEWDDRCEAAFQELKTRLT 3678 QP +V+EIRSFLGLAGYYR+F+E FS IA P+TRL QK+VKY+W + CE +FQELK RL Sbjct: 966 QPKTVSEIRSFLGLAGYYRKFIENFSKIAKPMTRLFQKDVKYKWSEECEQSFQELKNRLI 1025 Query: 3679 TAPVLIAPVPGESLVIYTDASGIGLGCVLMQNGKVIAYASRKLKTHEKNYPAHDLELASI 3858 +AP+LI P P + +Y DAS +GLGCVLMQ+GKV+AYASR+L+ HEKNYP HDLELA++ Sbjct: 1026 SAPILILPDPKKGFQVYCDASKLGLGCVLMQDGKVVAYASRQLRPHEKNYPTHDLELAAV 1085 Query: 3859 VFSLKIWRHYLYGEKFELFSDHKSLKYIFSQKELNMRQRRWMEYLKDYDFTLHYHPGKAN 4038 V +LKIWRHYL+G + E+++DHKSLKYIF+Q +LNMRQRRW+E +KDYD +HYHPGKAN Sbjct: 1086 VHALKIWRHYLFGTRTEVYTDHKSLKYIFTQPDLNMRQRRWLELIKDYDMGIHYHPGKAN 1145 Query: 4039 VVADALSRRKESVLAQMMLSEWHMLESVIEFVFDSPKNEDRQHSYLAPLRLHNTLTQRIV 4218 VVADALSR+ +E L + F+ ++A L TL ++ Sbjct: 1146 VVADALSRK-----GYCNATEGRQLPLELCKEFERLNLGIVSIGFVAALEAKPTLIDQVR 1200 Query: 4219 ESQNLDADV--VEHCLKAGDSENHEWNIHADGSIRFQNRLWIPTDEQLRKDILGEAHRSR 4392 E+Q D D+ ++ ++ G + + H G++ R+ +P ++ L+ IL EAH + Sbjct: 1201 EAQTNDPDIQEIKKNMRRGKAIGFLEDEH--GTVWLGERICVPDNKDLKDAILKEAHDTL 1258 Query: 4393 YSIHPGGTKMYRDLRKHFWWPGMKKHIAQYVNRCMTCQQVKAEHQRPAGLLQPLPVAEWK 4572 YSIHPG TKMY+DL++ FWW MK+ IA+YV C CQ+VKAEHQ+PAGLLQPL + EWK Sbjct: 1259 YSIHPGSTKMYQDLKERFWWASMKREIAEYVAVCDVCQRVKAEHQKPAGLLQPLKIPEWK 1318 Query: 4573 WEHVTMDFVTGLPKASDGLDAIWVIVDRLTKSAHFLPIKMTHTVDRLSRLYIAEIVRLHG 4752 WE + MDF+TGLPK S G D+IWVIVDRLTK AHF+P+K T++ RL+ LY+A IV LHG Sbjct: 1319 WEEIGMDFITGLPKTSLGHDSIWVIVDRLTKVAHFIPVKTTYSGSRLAELYMARIVCLHG 1378 Query: 4753 IPVSIVSDRDPRFTSQFWKSLQSALGTQLKFSTAFHPQTDGQSERVIQILEDMLRACVLD 4932 +P IVSDR +FTS FWK LQ +G++L FSTA+HPQTDGQ+ERV QILEDMLRAC LD Sbjct: 1379 VPKKIVSDRGSQFTSNFWKKLQEEMGSKLNFSTAYHPQTDGQTERVNQILEDMLRACALD 1438 Query: 4933 FGGQWKTHLPLVEFSYNNSFQSSIGMAPFEALYGRPCRSPICWTEVGDTILMGPELVEET 5112 FGG W +LP EFSYNNS+Q+S+ MAP+EALYGR CR+P+ W + G+ + G +++ E Sbjct: 1439 FGGSWDKNLPYAEFSYNNSYQASLQMAPYEALYGRKCRTPLLWDQTGERQVFGTDILREA 1498 Query: 5113 TEKIRMVQERIKAAQSRQKNYADKRRRPLEFEVGDMVFLKISPKRGISRFGLKGKLKPRY 5292 EK++++QER++ AQSR K+YAD RRR L FE GD V+L+++P RG+ RF KGKL PR+ Sbjct: 1499 EEKVKIIQERLRVAQSRHKSYADNRRRDLSFEEGDYVYLRVTPLRGVHRFHTKGKLVPRF 1558 Query: 5293 VGPFEITERVGQVAYRLVLPSQLAQIHNVFHVSMLRKYEPDPSHILDWQSLQLEEDVSYE 5472 VGP++I R G+VAY+L LP LA++HNVFHVS L+K P+ + + ++++ED++Y Sbjct: 1559 VGPYKIVSRRGEVAYQLELPQSLAEVHNVFHVSQLKKCLRVPTEEANLEQIEVQEDLTYV 1618 Query: 5473 EGPVQIIGRKEKMLRSRVIPLVKV 5544 E P++I+ E+ R+RVI KV Sbjct: 1619 EKPIRILETNERRTRNRVIRFCKV 1642