BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Akebia27_contig00002744
         (406 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004238386.1| PREDICTED: RNA pseudourine synthase 2, chlor...   196   4e-48
ref|XP_006342081.1| PREDICTED: RNA pseudouridine synthase 2, chl...   194   1e-47
ref|XP_003634352.1| PREDICTED: RNA pseudourine synthase 2, chlor...   191   7e-47
ref|XP_002519370.1| ribosomal pseudouridine synthase, putative [...   187   1e-45
ref|XP_006828851.1| hypothetical protein AMTR_s00001p00157430 [A...   186   4e-45
ref|XP_007017901.1| Pseudouridine synthase family protein isofor...   186   4e-45
ref|XP_007017900.1| Pseudouridine synthase family protein isofor...   186   4e-45
ref|XP_004161095.1| PREDICTED: LOW QUALITY PROTEIN: RNA pseudour...   184   1e-44
ref|XP_004143077.1| PREDICTED: RNA pseudourine synthase 2, chlor...   184   1e-44
ref|XP_006435255.1| hypothetical protein CICLE_v10001736mg [Citr...   182   5e-44
ref|XP_006435254.1| hypothetical protein CICLE_v10001736mg [Citr...   182   5e-44
ref|XP_006473714.1| PREDICTED: RNA pseudouridine synthase 2, chl...   181   7e-44
ref|XP_006390244.1| hypothetical protein EUTSA_v10018588mg [Eutr...   181   1e-43
ref|XP_004500918.1| PREDICTED: RNA pseudourine synthase 2, chlor...   181   1e-43
ref|XP_002301949.1| pseudouridine synthase family protein [Popul...   181   1e-43
gb|EEC81320.1| hypothetical protein OsI_24484 [Oryza sativa Indi...   180   2e-43
ref|XP_004966473.1| PREDICTED: RNA pseudouridine synthase 2, chl...   179   3e-43
ref|XP_002887624.1| T4O12.25 [Arabidopsis lyrata subsp. lyrata] ...   179   3e-43
gb|EXB81509.1| RNA pseudourine synthase 2 [Morus notabilis]           179   4e-43
ref|XP_002439034.1| hypothetical protein SORBIDRAFT_10g030300 [S...   179   5e-43

>ref|XP_004238386.1| PREDICTED: RNA pseudourine synthase 2, chloroplastic-like [Solanum
           lycopersicum]
          Length = 436

 Score =  196 bits (497), Expect = 4e-48
 Identities = 95/134 (70%), Positives = 113/134 (84%)
 Frame = +3

Query: 3   VNGRVIDKVSHVIKVGDKVNCTISELQPLRAEPEDIPLNIVYEDTHVLVVNKPAHMVVHP 182
           VNGRV DKVSH++K GDKV+CTI++L+PLRAEPEDIPL+IVYED HVLVVNKPAHMVVHP
Sbjct: 100 VNGRVTDKVSHMVKGGDKVDCTIADLKPLRAEPEDIPLDIVYEDEHVLVVNKPAHMVVHP 159

Query: 183 APGNANGTLVNAILHHCSLPTVALSNGEILSELEDDSDNEISNFSLDQSSREGLSSRICG 362
           APGNA GTLV+ ILHHCSLPTV+    E+LS+ ED SD+E++ FS ++S     SS +C 
Sbjct: 160 APGNATGTLVSGILHHCSLPTVSFPGEEVLSDGEDASDDELNIFSPNRSPNYDDSSVMCE 219

Query: 363 DSIRPGIVHRLDKG 404
            S+RPGIVHRLDKG
Sbjct: 220 SSVRPGIVHRLDKG 233


>ref|XP_006342081.1| PREDICTED: RNA pseudouridine synthase 2, chloroplastic-like
           [Solanum tuberosum]
          Length = 431

 Score =  194 bits (493), Expect = 1e-47
 Identities = 93/134 (69%), Positives = 113/134 (84%)
 Frame = +3

Query: 3   VNGRVIDKVSHVIKVGDKVNCTISELQPLRAEPEDIPLNIVYEDTHVLVVNKPAHMVVHP 182
           VNGRV DKVSH++K GDKV+CTI++L+PLRAEPEDIPL+IV+ED HVLVVNKPAHMVVHP
Sbjct: 100 VNGRVTDKVSHMVKGGDKVDCTIADLKPLRAEPEDIPLDIVFEDEHVLVVNKPAHMVVHP 159

Query: 183 APGNANGTLVNAILHHCSLPTVALSNGEILSELEDDSDNEISNFSLDQSSREGLSSRICG 362
           APGNA GTLV+ ILHHCSLPT++    E+LS+ ED SD+E++ FS ++S     SS +C 
Sbjct: 160 APGNATGTLVSGILHHCSLPTISFLGEEVLSDAEDASDDELNVFSGNRSPNYDDSSVMCE 219

Query: 363 DSIRPGIVHRLDKG 404
            S+RPGIVHRLDKG
Sbjct: 220 SSVRPGIVHRLDKG 233


>ref|XP_003634352.1| PREDICTED: RNA pseudourine synthase 2, chloroplastic-like [Vitis
           vinifera] gi|302141717|emb|CBI18920.3| unnamed protein
           product [Vitis vinifera]
          Length = 433

 Score =  191 bits (486), Expect = 7e-47
 Identities = 97/134 (72%), Positives = 110/134 (82%)
 Frame = +3

Query: 3   VNGRVIDKVSHVIKVGDKVNCTISELQPLRAEPEDIPLNIVYEDTHVLVVNKPAHMVVHP 182
           VN R++DKVSHVI+ GDKVNCTISELQPLRAEPEDIPL+IVYED HVLVVNKPAHMVVHP
Sbjct: 106 VNDRIVDKVSHVIRAGDKVNCTISELQPLRAEPEDIPLDIVYEDEHVLVVNKPAHMVVHP 165

Query: 183 APGNANGTLVNAILHHCSLPTVALSNGEILSELEDDSDNEISNFSLDQSSREGLSSRICG 362
           APGNA+GTLVN ILHHCSLPTVAL N +  SE +D SD+E ++F+       G +   C 
Sbjct: 166 APGNASGTLVNGILHHCSLPTVALPNRD--SEEDDISDDEFNSFA------AGQNCGTCE 217

Query: 363 DSIRPGIVHRLDKG 404
            +IRPGIVHRLDKG
Sbjct: 218 TNIRPGIVHRLDKG 231


>ref|XP_002519370.1| ribosomal pseudouridine synthase, putative [Ricinus communis]
           gi|223541437|gb|EEF42987.1| ribosomal pseudouridine
           synthase, putative [Ricinus communis]
          Length = 399

 Score =  187 bits (475), Expect = 1e-45
 Identities = 92/134 (68%), Positives = 106/134 (79%)
 Frame = +3

Query: 3   VNGRVIDKVSHVIKVGDKVNCTISELQPLRAEPEDIPLNIVYEDTHVLVVNKPAHMVVHP 182
           VNGRV+DKVSH +K GDKV CTISELQPLRAEPED+PL+IVYED H+LVVNKP HMVVHP
Sbjct: 101 VNGRVVDKVSHNVKFGDKVTCTISELQPLRAEPEDMPLDIVYEDEHLLVVNKPPHMVVHP 160

Query: 183 APGNANGTLVNAILHHCSLPTVALSNGEILSELEDDSDNEISNFSLDQSSREGLSSRICG 362
           APGN  GTLVN ILHHC+LPTVA+S+ E+LS+ ED SD++  ++S             C 
Sbjct: 161 APGNPTGTLVNGILHHCNLPTVAISSQEVLSDAEDRSDDDERSYSSS-----------CE 209

Query: 363 DSIRPGIVHRLDKG 404
            SIRPGIVHRLDKG
Sbjct: 210 SSIRPGIVHRLDKG 223


>ref|XP_006828851.1| hypothetical protein AMTR_s00001p00157430 [Amborella trichopoda]
           gi|548833830|gb|ERM96267.1| hypothetical protein
           AMTR_s00001p00157430 [Amborella trichopoda]
          Length = 452

 Score =  186 bits (471), Expect = 4e-45
 Identities = 89/134 (66%), Positives = 106/134 (79%)
 Frame = +3

Query: 3   VNGRVIDKVSHVIKVGDKVNCTISELQPLRAEPEDIPLNIVYEDTHVLVVNKPAHMVVHP 182
           VNG  I KVSH++KVGD V+CT+S LQPL+AEPED+PL+I+YED HVLVVNKPAHMVVHP
Sbjct: 112 VNGLPITKVSHIVKVGDMVDCTVSHLQPLKAEPEDMPLDIIYEDDHVLVVNKPAHMVVHP 171

Query: 183 APGNANGTLVNAILHHCSLPTVALSNGEILSELEDDSDNEISNFSLDQSSREGLSSRICG 362
           APGNANGTLVN ILHHC+LP   L +GE+ SE +D+ DN ++ F+ D  S +      C 
Sbjct: 172 APGNANGTLVNGILHHCTLPAFGLPDGELTSESDDECDNGLTMFNPDPISTQ------CR 225

Query: 363 DSIRPGIVHRLDKG 404
            SIRPGIVHRLDKG
Sbjct: 226 SSIRPGIVHRLDKG 239


>ref|XP_007017901.1| Pseudouridine synthase family protein isoform 2, partial [Theobroma
           cacao] gi|508723229|gb|EOY15126.1| Pseudouridine
           synthase family protein isoform 2, partial [Theobroma
           cacao]
          Length = 409

 Score =  186 bits (471), Expect = 4e-45
 Identities = 96/134 (71%), Positives = 106/134 (79%)
 Frame = +3

Query: 3   VNGRVIDKVSHVIKVGDKVNCTISELQPLRAEPEDIPLNIVYEDTHVLVVNKPAHMVVHP 182
           VNGRV+DKVSH ++ GDKVNC ISELQPLRAEPEDIPL+IVYED HVLVVNKP HMVVHP
Sbjct: 96  VNGRVVDKVSHGLRHGDKVNCVISELQPLRAEPEDIPLDIVYEDDHVLVVNKPPHMVVHP 155

Query: 183 APGNANGTLVNAILHHCSLPTVALSNGEILSELEDDSDNEISNFSLDQSSREGLSSRICG 362
           APGNA GTLVN ILHHCSLPTVALS  E+LS+ ED SD+       D+    G S+    
Sbjct: 156 APGNATGTLVNGILHHCSLPTVALSEKEVLSDTEDVSDD-------DEGFCYGASA---A 205

Query: 363 DSIRPGIVHRLDKG 404
            S+RPGIVHRLDKG
Sbjct: 206 ASVRPGIVHRLDKG 219


>ref|XP_007017900.1| Pseudouridine synthase family protein isoform 1 [Theobroma cacao]
           gi|508723228|gb|EOY15125.1| Pseudouridine synthase
           family protein isoform 1 [Theobroma cacao]
          Length = 433

 Score =  186 bits (471), Expect = 4e-45
 Identities = 96/134 (71%), Positives = 106/134 (79%)
 Frame = +3

Query: 3   VNGRVIDKVSHVIKVGDKVNCTISELQPLRAEPEDIPLNIVYEDTHVLVVNKPAHMVVHP 182
           VNGRV+DKVSH ++ GDKVNC ISELQPLRAEPEDIPL+IVYED HVLVVNKP HMVVHP
Sbjct: 109 VNGRVVDKVSHGLRHGDKVNCVISELQPLRAEPEDIPLDIVYEDDHVLVVNKPPHMVVHP 168

Query: 183 APGNANGTLVNAILHHCSLPTVALSNGEILSELEDDSDNEISNFSLDQSSREGLSSRICG 362
           APGNA GTLVN ILHHCSLPTVALS  E+LS+ ED SD+       D+    G S+    
Sbjct: 169 APGNATGTLVNGILHHCSLPTVALSEKEVLSDTEDVSDD-------DEGFCYGASA---A 218

Query: 363 DSIRPGIVHRLDKG 404
            S+RPGIVHRLDKG
Sbjct: 219 ASVRPGIVHRLDKG 232


>ref|XP_004161095.1| PREDICTED: LOW QUALITY PROTEIN: RNA pseudourine synthase 2,
           chloroplastic-like [Cucumis sativus]
          Length = 452

 Score =  184 bits (466), Expect = 1e-44
 Identities = 95/134 (70%), Positives = 108/134 (80%)
 Frame = +3

Query: 3   VNGRVIDKVSHVIKVGDKVNCTISELQPLRAEPEDIPLNIVYEDTHVLVVNKPAHMVVHP 182
           VNGRVIDKVSH +K GD +NCTISELQPLRAEPEDI L+IVYED HVLVVNKPAHMVVHP
Sbjct: 106 VNGRVIDKVSHNVKAGDVINCTISELQPLRAEPEDIDLDIVYEDEHVLVVNKPAHMVVHP 165

Query: 183 APGNANGTLVNAILHHCSLPTVALSNGEILSELEDDSDNEISNFSLDQSSREGLSSRICG 362
           APGNA GTLVNAIL+HCSLP VA S G      E++SD+++S+   D+ S  G+ SR+  
Sbjct: 166 APGNATGTLVNAILNHCSLPMVATSTG------ENESDSDVSD---DEFSSIGVFSRVSE 216

Query: 363 DSIRPGIVHRLDKG 404
             IRPGIVHRLDKG
Sbjct: 217 APIRPGIVHRLDKG 230


>ref|XP_004143077.1| PREDICTED: RNA pseudourine synthase 2, chloroplastic-like [Cucumis
           sativus]
          Length = 453

 Score =  184 bits (466), Expect = 1e-44
 Identities = 95/134 (70%), Positives = 108/134 (80%)
 Frame = +3

Query: 3   VNGRVIDKVSHVIKVGDKVNCTISELQPLRAEPEDIPLNIVYEDTHVLVVNKPAHMVVHP 182
           VNGRVIDKVSH +K GD +NCTISELQPLRAEPEDI L+IVYED HVLVVNKPAHMVVHP
Sbjct: 106 VNGRVIDKVSHNVKAGDVINCTISELQPLRAEPEDIDLDIVYEDEHVLVVNKPAHMVVHP 165

Query: 183 APGNANGTLVNAILHHCSLPTVALSNGEILSELEDDSDNEISNFSLDQSSREGLSSRICG 362
           APGNA GTLVNAIL+HCSLP VA S G      E++SD+++S+   D+ S  G+ SR+  
Sbjct: 166 APGNATGTLVNAILNHCSLPMVATSTG------ENESDSDVSD---DEFSSIGVFSRVSE 216

Query: 363 DSIRPGIVHRLDKG 404
             IRPGIVHRLDKG
Sbjct: 217 APIRPGIVHRLDKG 230


>ref|XP_006435255.1| hypothetical protein CICLE_v10001736mg [Citrus clementina]
           gi|557537377|gb|ESR48495.1| hypothetical protein
           CICLE_v10001736mg [Citrus clementina]
          Length = 341

 Score =  182 bits (461), Expect = 5e-44
 Identities = 95/134 (70%), Positives = 103/134 (76%)
 Frame = +3

Query: 3   VNGRVIDKVSHVIKVGDKVNCTISELQPLRAEPEDIPLNIVYEDTHVLVVNKPAHMVVHP 182
           VNG+V+ KVSH +K GD VNCTISELQPLRAE EDIPL+IVYED +VLVVNKPAHMVVHP
Sbjct: 100 VNGQVVSKVSHNVKGGDMVNCTISELQPLRAEAEDIPLDIVYEDDNVLVVNKPAHMVVHP 159

Query: 183 APGNANGTLVNAILHHCSLPTVALSNGEILSELEDDSDNEISNFSLDQSSREGLSSRICG 362
           APGNA GTLVN ILHHCSLPT+A SN E  S+ ED SD+            E  SS I G
Sbjct: 160 APGNATGTLVNGILHHCSLPTLASSNQEAFSDAEDISDD------------EEFSSSISG 207

Query: 363 DSIRPGIVHRLDKG 404
            SIRPGIVHRLDKG
Sbjct: 208 ASIRPGIVHRLDKG 221


>ref|XP_006435254.1| hypothetical protein CICLE_v10001736mg [Citrus clementina]
           gi|557537376|gb|ESR48494.1| hypothetical protein
           CICLE_v10001736mg [Citrus clementina]
          Length = 324

 Score =  182 bits (461), Expect = 5e-44
 Identities = 95/134 (70%), Positives = 103/134 (76%)
 Frame = +3

Query: 3   VNGRVIDKVSHVIKVGDKVNCTISELQPLRAEPEDIPLNIVYEDTHVLVVNKPAHMVVHP 182
           VNG+V+ KVSH +K GD VNCTISELQPLRAE EDIPL+IVYED +VLVVNKPAHMVVHP
Sbjct: 100 VNGQVVSKVSHNVKGGDMVNCTISELQPLRAEAEDIPLDIVYEDDNVLVVNKPAHMVVHP 159

Query: 183 APGNANGTLVNAILHHCSLPTVALSNGEILSELEDDSDNEISNFSLDQSSREGLSSRICG 362
           APGNA GTLVN ILHHCSLPT+A SN E  S+ ED SD+            E  SS I G
Sbjct: 160 APGNATGTLVNGILHHCSLPTLASSNQEAFSDAEDISDD------------EEFSSSISG 207

Query: 363 DSIRPGIVHRLDKG 404
            SIRPGIVHRLDKG
Sbjct: 208 ASIRPGIVHRLDKG 221


>ref|XP_006473714.1| PREDICTED: RNA pseudouridine synthase 2, chloroplastic-like [Citrus
           sinensis]
          Length = 421

 Score =  181 bits (460), Expect = 7e-44
 Identities = 94/134 (70%), Positives = 103/134 (76%)
 Frame = +3

Query: 3   VNGRVIDKVSHVIKVGDKVNCTISELQPLRAEPEDIPLNIVYEDTHVLVVNKPAHMVVHP 182
           +NG+V+ KVSH +K GD VNCTISELQPLRAE EDIPL+IVYED +VLVVNKPAHMVVHP
Sbjct: 100 INGQVVSKVSHNVKGGDMVNCTISELQPLRAEAEDIPLDIVYEDDNVLVVNKPAHMVVHP 159

Query: 183 APGNANGTLVNAILHHCSLPTVALSNGEILSELEDDSDNEISNFSLDQSSREGLSSRICG 362
           APGNA GTLVN ILHHCSLPT+A SN E  S+ ED SD+            E  SS I G
Sbjct: 160 APGNATGTLVNGILHHCSLPTLASSNQEAFSDAEDISDD------------EEFSSSISG 207

Query: 363 DSIRPGIVHRLDKG 404
            SIRPGIVHRLDKG
Sbjct: 208 ASIRPGIVHRLDKG 221


>ref|XP_006390244.1| hypothetical protein EUTSA_v10018588mg [Eutrema salsugineum]
           gi|557086678|gb|ESQ27530.1| hypothetical protein
           EUTSA_v10018588mg [Eutrema salsugineum]
          Length = 432

 Score =  181 bits (458), Expect = 1e-43
 Identities = 92/134 (68%), Positives = 104/134 (77%)
 Frame = +3

Query: 3   VNGRVIDKVSHVIKVGDKVNCTISELQPLRAEPEDIPLNIVYEDTHVLVVNKPAHMVVHP 182
           VNGRV+DKVSH +K GD+VNCTISELQPL+AEPEDIPL+IVYED H+LVVNKPAHMVVHP
Sbjct: 112 VNGRVVDKVSHNVKAGDEVNCTISELQPLKAEPEDIPLDIVYEDKHLLVVNKPAHMVVHP 171

Query: 183 APGNANGTLVNAILHHCSLPTVALSNGEILSELEDDSDNEISNFSLDQSSREGLSSRICG 362
           APGN  GTLVN ILHHCSLP VA SN       EDDSD E  +   + +S   L++    
Sbjct: 172 APGNPTGTLVNGILHHCSLPCVAYSNP------EDDSDEETLSDDEEMTSSSSLAA---- 221

Query: 363 DSIRPGIVHRLDKG 404
            S+RPGIVHRLDKG
Sbjct: 222 -SVRPGIVHRLDKG 234


>ref|XP_004500918.1| PREDICTED: RNA pseudourine synthase 2, chloroplastic-like [Cicer
           arietinum]
          Length = 438

 Score =  181 bits (458), Expect = 1e-43
 Identities = 88/134 (65%), Positives = 107/134 (79%)
 Frame = +3

Query: 3   VNGRVIDKVSHVIKVGDKVNCTISELQPLRAEPEDIPLNIVYEDTHVLVVNKPAHMVVHP 182
           VNGR++DKVS  ++ GD++ CTI+ELQ LRA PE+IPL+IVYED H+LV+NKPAHMVVHP
Sbjct: 111 VNGRLVDKVSFNVRAGDEIKCTIAELQKLRAVPENIPLDIVYEDEHLLVINKPAHMVVHP 170

Query: 183 APGNANGTLVNAILHHCSLPTVALSNGEILSELEDDSDNEISNFSLDQSSREGLSSRICG 362
           APGN +GTLVN ILHHC+LP V  S  E LS+ E DSD+E++ F+    S EGL SR+  
Sbjct: 171 APGNTSGTLVNGILHHCNLPNVEFSKDEALSDTE-DSDDELNGFTSQAPSCEGLDSRLSI 229

Query: 363 DSIRPGIVHRLDKG 404
            SIRPGIVHRLDKG
Sbjct: 230 ASIRPGIVHRLDKG 243


>ref|XP_002301949.1| pseudouridine synthase family protein [Populus trichocarpa]
           gi|222843675|gb|EEE81222.1| pseudouridine synthase
           family protein [Populus trichocarpa]
          Length = 444

 Score =  181 bits (458), Expect = 1e-43
 Identities = 95/134 (70%), Positives = 105/134 (78%)
 Frame = +3

Query: 3   VNGRVIDKVSHVIKVGDKVNCTISELQPLRAEPEDIPLNIVYEDTHVLVVNKPAHMVVHP 182
           VNG+VIDKVSH +K GDKVNC ISELQPLRAEPE+IPL+IVYED +VLVVNKPAHMVVHP
Sbjct: 123 VNGKVIDKVSHNVKAGDKVNCVISELQPLRAEPENIPLDIVYEDENVLVVNKPAHMVVHP 182

Query: 183 APGNANGTLVNAILHHCSLPTVALSNGEILSELEDDSDNEISNFSLDQSSREGLSSRICG 362
           APGNA GTLVN ILHHCSLPTV  S+ E+LS  ED SD++           EGL S    
Sbjct: 183 APGNATGTLVNGILHHCSLPTV--SSQEVLSGAEDVSDDD----------DEGLCSSSYA 230

Query: 363 DSIRPGIVHRLDKG 404
            S+RPGIVHRLDKG
Sbjct: 231 ASVRPGIVHRLDKG 244


>gb|EEC81320.1| hypothetical protein OsI_24484 [Oryza sativa Indica Group]
          Length = 445

 Score =  180 bits (457), Expect = 2e-43
 Identities = 89/135 (65%), Positives = 105/135 (77%), Gaps = 1/135 (0%)
 Frame = +3

Query: 3   VNGRVIDKVSHVIKVGDKVNCTISELQPLRAEPEDIPLNIVYEDTHVLVVNKPAHMVVHP 182
           VNGR + KVSH++K GD V+CT+SELQPLRAEPEDIPL+IVYED H+LVVNKPAHMVVHP
Sbjct: 103 VNGRPVSKVSHMVKGGDIVSCTVSELQPLRAEPEDIPLDIVYEDDHLLVVNKPAHMVVHP 162

Query: 183 APGNANGTLVNAILHHCSLPT-VALSNGEILSELEDDSDNEISNFSLDQSSREGLSSRIC 359
           APGNANGTLVNAILHHC + T   L+   I  E  D SD++I  F +DQ +   +SS + 
Sbjct: 163 APGNANGTLVNAILHHCKISTFTCLARNSIDDECPDSSDDDIDVFDIDQFTTGEVSSEVR 222

Query: 360 GDSIRPGIVHRLDKG 404
              +RPGIVHRLDKG
Sbjct: 223 EALVRPGIVHRLDKG 237


>ref|XP_004966473.1| PREDICTED: RNA pseudouridine synthase 2, chloroplastic-like
           [Setaria italica]
          Length = 437

 Score =  179 bits (455), Expect = 3e-43
 Identities = 88/135 (65%), Positives = 104/135 (77%), Gaps = 1/135 (0%)
 Frame = +3

Query: 3   VNGRVIDKVSHVIKVGDKVNCTISELQPLRAEPEDIPLNIVYEDTHVLVVNKPAHMVVHP 182
           VNGR + KVSH++K GD V+CT+SELQPLRAE EDIPL+IVYED HVLVVNKPAHMVVHP
Sbjct: 99  VNGRPVSKVSHMVKGGDLVSCTVSELQPLRAEAEDIPLDIVYEDDHVLVVNKPAHMVVHP 158

Query: 183 APGNANGTLVNAILHHCSLPT-VALSNGEILSELEDDSDNEISNFSLDQSSREGLSSRIC 359
           APGNANGTLVNAILHHC + T   L+      E  D SD+++  F +DQ + E +SS + 
Sbjct: 159 APGNANGTLVNAILHHCRISTFTCLARNSTGDECPDSSDDDVDVFDVDQFTTEDVSSEVR 218

Query: 360 GDSIRPGIVHRLDKG 404
              +RPGIVHRLDKG
Sbjct: 219 NALVRPGIVHRLDKG 233


>ref|XP_002887624.1| T4O12.25 [Arabidopsis lyrata subsp. lyrata]
           gi|297333465|gb|EFH63883.1| T4O12.25 [Arabidopsis lyrata
           subsp. lyrata]
          Length = 930

 Score =  179 bits (455), Expect = 3e-43
 Identities = 94/134 (70%), Positives = 103/134 (76%)
 Frame = +3

Query: 3   VNGRVIDKVSHVIKVGDKVNCTISELQPLRAEPEDIPLNIVYEDTHVLVVNKPAHMVVHP 182
           VNGRV+DKVSH +K GD+VNCTISELQPL+AE EDIPL+IVYED HVLVVNKPAHMVVHP
Sbjct: 613 VNGRVVDKVSHNVKAGDEVNCTISELQPLKAEAEDIPLDIVYEDKHVLVVNKPAHMVVHP 672

Query: 183 APGNANGTLVNAILHHCSLPTVALSNGEILSELEDDSDNEISNFSLDQSSREGLSSRICG 362
           APGN  GTLVN ILHHCSLP V+ SN E     +DDSD E   FS D+      SS    
Sbjct: 673 APGNPTGTLVNGILHHCSLPCVSYSNAE-----DDDSDEE--TFSDDEEMTTSSSSYAA- 724

Query: 363 DSIRPGIVHRLDKG 404
            S+RPGIVHRLDKG
Sbjct: 725 -SVRPGIVHRLDKG 737


>gb|EXB81509.1| RNA pseudourine synthase 2 [Morus notabilis]
          Length = 369

 Score =  179 bits (454), Expect = 4e-43
 Identities = 90/134 (67%), Positives = 103/134 (76%)
 Frame = +3

Query: 3   VNGRVIDKVSHVIKVGDKVNCTISELQPLRAEPEDIPLNIVYEDTHVLVVNKPAHMVVHP 182
           VNG+V+DKVS  +K GDK++CTISELQPL+AE EDIPL IV+ED  VLVVNKP HMVVHP
Sbjct: 120 VNGQVVDKVSQNVKTGDKIDCTISELQPLKAEAEDIPLEIVHEDDSVLVVNKPPHMVVHP 179

Query: 183 APGNANGTLVNAILHHCSLPTVALSNGEILSELEDDSDNEISNFSLDQSSREGLSSRICG 362
           APGNA GTLVN ILHHCSLPT+A S+ E LS+ ED  D+E    S+D S        I G
Sbjct: 180 APGNAKGTLVNGILHHCSLPTIAFSHQESLSDDEDTCDDEFRGMSMDAS--------ISG 231

Query: 363 DSIRPGIVHRLDKG 404
            S+RPGIVHRLDKG
Sbjct: 232 ASVRPGIVHRLDKG 245


>ref|XP_002439034.1| hypothetical protein SORBIDRAFT_10g030300 [Sorghum bicolor]
           gi|241917257|gb|EER90401.1| hypothetical protein
           SORBIDRAFT_10g030300 [Sorghum bicolor]
          Length = 441

 Score =  179 bits (453), Expect = 5e-43
 Identities = 89/135 (65%), Positives = 103/135 (76%), Gaps = 1/135 (0%)
 Frame = +3

Query: 3   VNGRVIDKVSHVIKVGDKVNCTISELQPLRAEPEDIPLNIVYEDTHVLVVNKPAHMVVHP 182
           VNGR + KVSH +K GD V+CT+SELQPLRAE EDIPL+IVYED HVLVVNKPAHMVVHP
Sbjct: 104 VNGRPVSKVSHTVKGGDLVSCTVSELQPLRAEAEDIPLDIVYEDDHVLVVNKPAHMVVHP 163

Query: 183 APGNANGTLVNAILHHCSLPT-VALSNGEILSELEDDSDNEISNFSLDQSSREGLSSRIC 359
           APGNANGTLVNAILHHC + T   L+      E  D SD++I  F++DQ + E  SS + 
Sbjct: 164 APGNANGTLVNAILHHCKISTFTCLARSSTGDECLDSSDDDIDVFNVDQFATEDASSEVR 223

Query: 360 GDSIRPGIVHRLDKG 404
              +RPGIVHRLDKG
Sbjct: 224 NALVRPGIVHRLDKG 238