BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Akebia27_contig00002120
         (1240 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_006482478.1| PREDICTED: chloroplastic group IIA intron sp...   253   2e-64
ref|XP_002275511.1| PREDICTED: chloroplastic group IIA intron sp...   251   3e-64
ref|XP_006482476.1| PREDICTED: chloroplastic group IIA intron sp...   245   3e-62
ref|XP_006431007.1| hypothetical protein CICLE_v10013715mg [Citr...   241   5e-61
ref|XP_006482479.1| PREDICTED: chloroplastic group IIA intron sp...   239   1e-60
ref|XP_006482480.1| PREDICTED: chloroplastic group IIA intron sp...   238   5e-60
emb|CBI34982.3| unnamed protein product [Vitis vinifera]              234   6e-59
ref|XP_007031356.1| CRM family member 2, putative isoform 2 [The...   232   2e-58
ref|XP_007031355.1| CRM family member 2, putative isoform 1 [The...   232   2e-58
ref|XP_006482481.1| PREDICTED: chloroplastic group IIA intron sp...   230   8e-58
ref|XP_002517407.1| conserved hypothetical protein [Ricinus comm...   229   1e-57
ref|XP_006338518.1| PREDICTED: chloroplastic group IIA intron sp...   229   2e-57
ref|XP_004164655.1| PREDICTED: LOW QUALITY PROTEIN: chloroplasti...   227   9e-57
ref|XP_004147480.1| PREDICTED: chloroplastic group IIA intron sp...   227   9e-57
ref|XP_004232267.1| PREDICTED: chloroplastic group IIA intron sp...   226   2e-56
ref|XP_003581323.1| PREDICTED: chloroplastic group IIA intron sp...   223   1e-55
ref|XP_004489340.1| PREDICTED: chloroplastic group IIA intron sp...   222   3e-55
ref|XP_004489339.1| PREDICTED: chloroplastic group IIA intron sp...   222   3e-55
gb|EYU44699.1| hypothetical protein MIMGU_mgv1a000630mg [Mimulus...   220   9e-55
gb|EEC77426.1| hypothetical protein OsI_16218 [Oryza sativa Indi...   220   9e-55

>ref|XP_006482478.1| PREDICTED: chloroplastic group IIA intron splicing facilitator CRS1,
            chloroplastic-like isoform X3 [Citrus sinensis]
          Length = 1062

 Score =  253 bits (645), Expect = 2e-64
 Identities = 165/369 (44%), Positives = 216/369 (58%), Gaps = 19/369 (5%)
 Frame = +3

Query: 6    KKQAMKLSIEAQRRESLKLHVLKLTKNIDQLKLQLIKDDTQMNLVQSTKHKRPNTKFETS 185
            K++AMK S+EAQRR+SLKLHVL+LT+NI++LKLQL+KD    +L    +   P  K E  
Sbjct: 699  KREAMKRSLEAQRRQSLKLHVLELTRNIEKLKLQLVKDKEANSLETIDESILPLVKEEIG 758

Query: 186  D-QPGFVEYSHNQDNAGSEAFANDQEAMEWRGNDSTPLDLNYCMDASSYSKETIQSEKPM 362
            D QP     S        +A           G D T  + N   DA+      IQ +K  
Sbjct: 759  DMQPAECMRSDTSHEVNVQARGEC-------GADLTSTESNDTGDATIDGPPAIQQDKQT 811

Query: 363  NPFSHHDESA-ETELKSSFESALKETHSNTFLDEMGDRDDDYSTSLPMNSTSQDTAEPHM 539
               +H+  S  E E KSS +S  KE+  N   D   +     ++S P NS      EP  
Sbjct: 812  ESLTHNGISINEIESKSSLKSVSKESQLNMIADFFAEGVASGTSSCPDNSMCSSDNEPRE 871

Query: 540  YANEFIESSNKLNKRKIESPLDIDDVEKGSIVPFG-----------AAPLSNRDRLVLRK 686
             + E  +S +  N+  IE   ++     G   P G           A  LSNRDRL+LRK
Sbjct: 872  SSIESAKSRSSENE-PIEQSFELAKGRSGLSTPIGTGNVWNENNSRAIQLSNRDRLLLRK 930

Query: 687  QALKMKKRPVLAIGRNNVVTGVAKTIKTHFKKHPLAIVNVKGRAKGTSIQEVVFKLEQAT 866
            QAL+MKKRPVLA+GR+N+VTGVAK IK HF+K+PLAIVNVKGRAKGTS+QEVV KLE+AT
Sbjct: 931  QALRMKKRPVLAVGRSNIVTGVAKAIKAHFEKYPLAIVNVKGRAKGTSVQEVVAKLEEAT 990

Query: 867  GAVMVSQEPNKVILYRGW-IEGEEPHGVKEKIKARTSTTQEM-----VSPQLIEAIRLEC 1028
            GAV+VSQEP+KVILYRGW  E E     ++  +A+ S  +++     VS +L+ AI+LEC
Sbjct: 991  GAVLVSQEPSKVILYRGWGAEDESSPRGRQNSRAKPSIVRDVRPWPAVSRELLAAIKLEC 1050

Query: 1029 GLQSCKEEE 1055
            GLQ  +E+E
Sbjct: 1051 GLQGQQEQE 1059


>ref|XP_002275511.1| PREDICTED: chloroplastic group IIA intron splicing facilitator CRS1,
            chloroplastic-like [Vitis vinifera]
          Length = 1044

 Score =  251 bits (642), Expect = 3e-64
 Identities = 164/362 (45%), Positives = 224/362 (61%), Gaps = 9/362 (2%)
 Frame = +3

Query: 3    NKKQAMKLSIEAQRRESLKLHVLKLTKNIDQLKLQLIKDDTQMNLVQSTKHKRPNTKFET 182
            NK++A+K S+EAQRRESLKLHVL+LT+NID+LK Q         LV   K K  N+K + 
Sbjct: 710  NKREALKRSLEAQRRESLKLHVLRLTRNIDELKHQ---------LVSRIKDKETNSK-QL 759

Query: 183  SDQPGFVEYSHNQDNAGSEAFANDQEAMEWRGNDSTPLDLNYCMDASSYSKETIQSEKPM 362
             D+                  +    A E  G D   +  +  MD+S  S +T  ++K +
Sbjct: 760  VDK------------------SRLHLARERYGADVILIHSSDGMDSSRDSLQTSHNDKRI 801

Query: 363  N-PFSHHDESAETELKSSFESALKETHSNTFLDEMGDRDDDYSTSLPMNSTSQDTAEPHM 539
            + P     ++ E   + S ES LKE  +N  L +M +  +  + S  + S  + +    +
Sbjct: 802  DFPSMCDSDTDEANPEPSSESVLKEIETNV-LTDMNEEGECTTCSEDLVSQGETSCYAIV 860

Query: 540  YANEFIESSNKLNKRKIESPLDIDDVEKGSIVPFGAAPLSNRDRLVLRKQALKMKKRPVL 719
               E +ESS K +K + + P+      + + +PF AAPLSNR+RL+LRKQAL+MKKRPV+
Sbjct: 861  NHEETMESSVKSSKNEFKPPVQRPVDTRSNEMPFRAAPLSNRERLLLRKQALRMKKRPVI 920

Query: 720  AIGRNNVVTGVAKTIKTHFKKHPLAIVNVKGRAKGTSIQEVVFKLEQATGAVMVSQEPNK 899
            A+GR+N+VTGVAKTIK HF+KHPLAIVNVKGRAKGTS+QEV+FKLEQATGAV+VSQEP+K
Sbjct: 921  AVGRSNIVTGVAKTIKAHFQKHPLAIVNVKGRAKGTSVQEVIFKLEQATGAVLVSQEPSK 980

Query: 900  VILYRGWIEGEE---PHGVKEKIKARTSTTQE-----MVSPQLIEAIRLECGLQSCKEEE 1055
            VILYRGW   EE    + +      +TS  +E      VSP+L  AIRLECGL+S  +++
Sbjct: 981  VILYRGWGAREENGRSYRMNRSDARKTSAGREGGPRPTVSPELRAAIRLECGLKS-NQDK 1039

Query: 1056 GA 1061
            GA
Sbjct: 1040 GA 1041


>ref|XP_006482476.1| PREDICTED: chloroplastic group IIA intron splicing facilitator CRS1,
            chloroplastic-like isoform X1 [Citrus sinensis]
            gi|568857850|ref|XP_006482477.1| PREDICTED: chloroplastic
            group IIA intron splicing facilitator CRS1,
            chloroplastic-like isoform X2 [Citrus sinensis]
          Length = 1076

 Score =  245 bits (625), Expect = 3e-62
 Identities = 168/382 (43%), Positives = 218/382 (57%), Gaps = 32/382 (8%)
 Frame = +3

Query: 6    KKQAMKLSIEAQRRESLKLHVLKLTKNIDQLKLQLIKDDTQMNLVQSTKHKRPNTKFETS 185
            K++AMK S+EAQRR+SLKLHVL+LT+NI++LKLQL+KD    +L    +   P  K E  
Sbjct: 699  KREAMKRSLEAQRRQSLKLHVLELTRNIEKLKLQLVKDKEANSLETIDESILPLVKEEIG 758

Query: 186  D-QPGFVEYSHNQDNAGSEAFANDQEAMEWRGNDSTPLDLNYCMDASSYSKETIQSEKPM 362
            D QP     S        +A           G D T  + N   DA+      IQ +K  
Sbjct: 759  DMQPAECMRSDTSHEVNVQARGEC-------GADLTSTESNDTGDATIDGPPAIQQDKQT 811

Query: 363  NPFSHHDESA-ETELKSSFESALKETHSNTFLDEMGDRDDDYSTSLPMNSTSQDT----- 524
               +H+  S  E E KSS +S  KE+  N   D   +     ++S P NS  +       
Sbjct: 812  ESLTHNGISINEIESKSSLKSVSKESQLNMIADFFAEGVASGTSSCPDNSMQEVMEYNTI 871

Query: 525  --AEPHMYANEFIESSNKLNKRK------IESPLDIDDVEKGSIVPFG-----------A 647
              AE     NE  ESS +  K +      IE   ++     G   P G           A
Sbjct: 872  VDAEQCSSDNEPRESSIESAKSRSSENEPIEQSFELAKGRSGLSTPIGTGNVWNENNSRA 931

Query: 648  APLSNRDRLVLRKQALKMKKRPVLAIGRNNVVTGVAKTIKTHFKKHPLAIVNVKGRAKGT 827
              LSNRDRL+LRKQAL+MKKRPVLA+GR+N+VTGVAK IK HF+K+PLAIVNVKGRAKGT
Sbjct: 932  IQLSNRDRLLLRKQALRMKKRPVLAVGRSNIVTGVAKAIKAHFEKYPLAIVNVKGRAKGT 991

Query: 828  SIQEVVFKLEQATGAVMVSQEPNKVILYRGW-IEGEEPHGVKEKIKARTSTTQEM----- 989
            S+QEVV KLE+ATGAV+VSQEP+KVILYRGW  E E     ++  +A+ S  +++     
Sbjct: 992  SVQEVVAKLEEATGAVLVSQEPSKVILYRGWGAEDESSPRGRQNSRAKPSIVRDVRPWPA 1051

Query: 990  VSPQLIEAIRLECGLQSCKEEE 1055
            VS +L+ AI+LECGLQ  +E+E
Sbjct: 1052 VSRELLAAIKLECGLQGQQEQE 1073


>ref|XP_006431007.1| hypothetical protein CICLE_v10013715mg [Citrus clementina]
            gi|557533064|gb|ESR44247.1| hypothetical protein
            CICLE_v10013715mg [Citrus clementina]
          Length = 1062

 Score =  241 bits (615), Expect = 5e-61
 Identities = 163/375 (43%), Positives = 216/375 (57%), Gaps = 25/375 (6%)
 Frame = +3

Query: 6    KKQAMKLSIEAQRRESLKLHVLKLTKNIDQLKLQLIKDDTQMNLVQSTKHKRPNTKFETS 185
            K++AMK S+EAQRR+SLKLHVL+LT+NI++LKLQL+KD    +L             ET 
Sbjct: 699  KREAMKRSLEAQRRQSLKLHVLELTRNIEKLKLQLVKDKEANSL-------------ETI 745

Query: 186  DQP-----GFVEYSH--NQDNAGSEAFANDQEAMEWRGNDSTPLDLNYCMDASSYSKETI 344
            D+      G + +       N     F    +A    G D T  + N   DA+      I
Sbjct: 746  DESILPLVGSIIFLMIWKSSNIPEIVFGIFFKARGECGADLTSTESNDTGDATIDGPPAI 805

Query: 345  QSEKPMNPFSHHDESA-ETELKSSFESALKETHSNTFLDEMGDRDDDYSTSLPMNSTSQD 521
            Q +K     +H+  S  E E +SS +S  KE+  N   D   +     + S P NS    
Sbjct: 806  QQDKQTESLTHNGISFNEIESESSLKSVSKESQLNMIADFFAEGVASGTPSCPDNSMCSS 865

Query: 522  TAEPHMYANEFIESSNKLNKRKIESPLDIDDVEKGSIVPFG-----------AAPLSNRD 668
              EP   + E  +S +  N+  IE   ++     G   P G           A  LSNRD
Sbjct: 866  DNEPRESSIESAKSRSSENE-PIEQCFELAKGRSGLSTPIGTGNVWNENNSRAIQLSNRD 924

Query: 669  RLVLRKQALKMKKRPVLAIGRNNVVTGVAKTIKTHFKKHPLAIVNVKGRAKGTSIQEVVF 848
            RL+LRKQAL+MKKRPVLA+GR+N+VTGVAK IK HF+K+PLAIVNVKGRAKGTS+QEVV 
Sbjct: 925  RLLLRKQALRMKKRPVLAVGRSNIVTGVAKAIKAHFEKYPLAIVNVKGRAKGTSVQEVVA 984

Query: 849  KLEQATGAVMVSQEPNKVILYRGW-IEGEEPHGVKEKIKARTSTTQEM-----VSPQLIE 1010
            KLE+ATGAV+VSQEP+KVILYRGW  E E     ++  +A+ S  +++     VS +L+ 
Sbjct: 985  KLEEATGAVLVSQEPSKVILYRGWGAEDESSPRGRQNSRAKLSIVRDVRPWPAVSRELLA 1044

Query: 1011 AIRLECGLQSCKEEE 1055
            AI+LECGLQ  +E+E
Sbjct: 1045 AIKLECGLQGQQEQE 1059


>ref|XP_006482479.1| PREDICTED: chloroplastic group IIA intron splicing facilitator CRS1,
            chloroplastic-like isoform X4 [Citrus sinensis]
          Length = 1050

 Score =  239 bits (611), Expect = 1e-60
 Identities = 162/365 (44%), Positives = 221/365 (60%), Gaps = 15/365 (4%)
 Frame = +3

Query: 6    KKQAMKLSIEAQRRESLKLHVLKLTKNIDQLKLQLIKDDTQMNLVQSTKHKRPNTKFETS 185
            K++AMK S+EAQRR+SLKLHVL+LT+NI++LKLQL+KD    +L    +   P  K E  
Sbjct: 699  KREAMKRSLEAQRRQSLKLHVLELTRNIEKLKLQLVKDKEANSLETIDESILPLVKEEIG 758

Query: 186  D-QPGFVEYSHNQDNAGSEAFANDQEAMEWRGNDSTPLDLNYCMDASSYSKETIQSEKPM 362
            D QP     S        +A           G D T  + N   DA+      IQ +K  
Sbjct: 759  DMQPAECMRSDTSHEVNVQARGEC-------GADLTSTESNDTGDATIDGPPAIQQDKQT 811

Query: 363  NPFSHHDESAE---TELKSSFESALKETHS-NTFLDEMGDRDDDYSTSLPMNSTSQDTAE 530
               +H+D  AE   +   S  +++++E    NT +D      +  S+      +S ++A+
Sbjct: 812  ESLTHNDFFAEGVASGTSSCPDNSMQEVMEYNTIVDA-----EQCSSDNEPRESSIESAK 866

Query: 531  PHMYANEFIESSNKLNKRK--IESPLDIDDV--EKGSIVPFGAAPLSNRDRLVLRKQALK 698
                 NE IE S +L K +  + +P+   +V  E  S     A  LSNRDRL+LRKQAL+
Sbjct: 867  SRSSENEPIEQSFELAKGRSGLSTPIGTGNVWNENNS----RAIQLSNRDRLLLRKQALR 922

Query: 699  MKKRPVLAIGRNNVVTGVAKTIKTHFKKHPLAIVNVKGRAKGTSIQEVVFKLEQATGAVM 878
            MKKRPVLA+GR+N+VTGVAK IK HF+K+PLAIVNVKGRAKGTS+QEVV KLE+ATGAV+
Sbjct: 923  MKKRPVLAVGRSNIVTGVAKAIKAHFEKYPLAIVNVKGRAKGTSVQEVVAKLEEATGAVL 982

Query: 879  VSQEPNKVILYRGW-IEGEEPHGVKEKIKARTSTTQEM-----VSPQLIEAIRLECGLQS 1040
            VSQEP+KVILYRGW  E E     ++  +A+ S  +++     VS +L+ AI+LECGLQ 
Sbjct: 983  VSQEPSKVILYRGWGAEDESSPRGRQNSRAKPSIVRDVRPWPAVSRELLAAIKLECGLQG 1042

Query: 1041 CKEEE 1055
             +E+E
Sbjct: 1043 QQEQE 1047


>ref|XP_006482480.1| PREDICTED: chloroplastic group IIA intron splicing facilitator CRS1,
            chloroplastic-like isoform X5 [Citrus sinensis]
          Length = 1045

 Score =  238 bits (606), Expect = 5e-60
 Identities = 160/362 (44%), Positives = 220/362 (60%), Gaps = 12/362 (3%)
 Frame = +3

Query: 6    KKQAMKLSIEAQRRESLKLHVLKLTKNIDQLKLQLIKDDTQMNLVQSTKHKRPNTKFETS 185
            K++AMK S+EAQRR+SLKLHVL+LT+NI++LKLQL+KD    +L    +   P  K E  
Sbjct: 699  KREAMKRSLEAQRRQSLKLHVLELTRNIEKLKLQLVKDKEANSLETIDESILPLVKEEIG 758

Query: 186  D-QPGFVEYSHNQDNAGSEAFANDQEAMEWRGNDSTPLDLNYCMDASSYSKETIQSEKPM 362
            D QP     S        +A           G D T  + N   DA+      IQ +K  
Sbjct: 759  DMQPAECMRSDTSHEVNVQARGEC-------GADLTSTESNDTGDATIDGPPAIQQDKQT 811

Query: 363  NPFSHHDESAETELKSSFESALKETHS-NTFLDEMGDRDDDYSTSLPMNSTSQDTAEPHM 539
               +H+  ++ T   S  +++++E    NT +D      +  S+      +S ++A+   
Sbjct: 812  ESLTHNGVASGTS--SCPDNSMQEVMEYNTIVDA-----EQCSSDNEPRESSIESAKSRS 864

Query: 540  YANEFIESSNKLNKRK--IESPLDIDDV--EKGSIVPFGAAPLSNRDRLVLRKQALKMKK 707
              NE IE S +L K +  + +P+   +V  E  S     A  LSNRDRL+LRKQAL+MKK
Sbjct: 865  SENEPIEQSFELAKGRSGLSTPIGTGNVWNENNS----RAIQLSNRDRLLLRKQALRMKK 920

Query: 708  RPVLAIGRNNVVTGVAKTIKTHFKKHPLAIVNVKGRAKGTSIQEVVFKLEQATGAVMVSQ 887
            RPVLA+GR+N+VTGVAK IK HF+K+PLAIVNVKGRAKGTS+QEVV KLE+ATGAV+VSQ
Sbjct: 921  RPVLAVGRSNIVTGVAKAIKAHFEKYPLAIVNVKGRAKGTSVQEVVAKLEEATGAVLVSQ 980

Query: 888  EPNKVILYRGW-IEGEEPHGVKEKIKARTSTTQEM-----VSPQLIEAIRLECGLQSCKE 1049
            EP+KVILYRGW  E E     ++  +A+ S  +++     VS +L+ AI+LECGLQ  +E
Sbjct: 981  EPSKVILYRGWGAEDESSPRGRQNSRAKPSIVRDVRPWPAVSRELLAAIKLECGLQGQQE 1040

Query: 1050 EE 1055
            +E
Sbjct: 1041 QE 1042


>emb|CBI34982.3| unnamed protein product [Vitis vinifera]
          Length = 1028

 Score =  234 bits (597), Expect = 6e-59
 Identities = 146/312 (46%), Positives = 197/312 (63%), Gaps = 1/312 (0%)
 Frame = +3

Query: 3    NKKQAMKLSIEAQRRESLKLHVLKLTKNIDQLKLQLIKDDTQMNLVQSTKHKRPNTKFET 182
            NK++A+K S+EAQRRESLKLHVL+LT+NID+LK Q         LV   K K  N+K + 
Sbjct: 710  NKREALKRSLEAQRRESLKLHVLRLTRNIDELKHQ---------LVSRIKDKETNSK-QL 759

Query: 183  SDQPGFVEYSHNQDNAGSEAFANDQEAMEWRGNDSTPLDLNYCMDASSYSKETIQSEKPM 362
             D+                  +    A E  G D   +  +  MD+S  S +T  ++K +
Sbjct: 760  VDK------------------SRLHLARERYGADVILIHSSDGMDSSRDSLQTSHNDKRI 801

Query: 363  N-PFSHHDESAETELKSSFESALKETHSNTFLDEMGDRDDDYSTSLPMNSTSQDTAEPHM 539
            + P     ++ E   + S ES LKE  +N  L +M +  +  + S  + S  + +    +
Sbjct: 802  DFPSMCDSDTDEANPEPSSESVLKEIETNV-LTDMNEEGECTTCSEDLVSQGETSCYAIV 860

Query: 540  YANEFIESSNKLNKRKIESPLDIDDVEKGSIVPFGAAPLSNRDRLVLRKQALKMKKRPVL 719
               E +ESS K +K + + P+      + + +PF AAPLSNR+RL+LRKQAL+MKKRPV+
Sbjct: 861  NHEETMESSVKSSKNEFKPPVQRPVDTRSNEMPFRAAPLSNRERLLLRKQALRMKKRPVI 920

Query: 720  AIGRNNVVTGVAKTIKTHFKKHPLAIVNVKGRAKGTSIQEVVFKLEQATGAVMVSQEPNK 899
            A+GR+N+VTGVAKTIK HF+KHPLAIVNVKGRAKGTS+QEV+FKLEQATGAV+VSQEP+K
Sbjct: 921  AVGRSNIVTGVAKTIKAHFQKHPLAIVNVKGRAKGTSVQEVIFKLEQATGAVLVSQEPSK 980

Query: 900  VILYRGWIEGEE 935
            VILYRGW   EE
Sbjct: 981  VILYRGWGAREE 992


>ref|XP_007031356.1| CRM family member 2, putative isoform 2 [Theobroma cacao]
            gi|508710385|gb|EOY02282.1| CRM family member 2, putative
            isoform 2 [Theobroma cacao]
          Length = 1045

 Score =  232 bits (592), Expect = 2e-58
 Identities = 159/365 (43%), Positives = 221/365 (60%), Gaps = 15/365 (4%)
 Frame = +3

Query: 6    KKQAMKLSIEAQRRESLKLHVLKLTKNIDQLKLQLI--KDDTQMNLVQSTKHKRPNTKFE 179
            K+QAMK S+E QRR+SLKLH+L LT+N++ L+ QL+  K+   M  V+ +       + E
Sbjct: 691  KRQAMKRSLEEQRRKSLKLHILNLTRNVNDLEHQLVVDKEANSMQTVEQSSLPLVQEELE 750

Query: 180  TSDQPGFVEYSHNQDNAGSEAFANDQEAMEWRGNDSTPLDLNYCMDASSYSKETIQSEKP 359
            T      VEY+ +     + +     E+ +  G++ST +  +  +   S  + + Q    
Sbjct: 751  TLQS---VEYTGSVIECPASS-GGHVESRDKDGSESTSMKNDKMVATISIRQPSKQEF-- 804

Query: 360  MNPFSHHD--ESAETELKSSFESALKETHSNTFLDEMGDRDDDYSTSLPMN------STS 515
            M P S HD  E+ +TE + S ES  +++H+ T L  +  + +   TS P N       + 
Sbjct: 805  MEPSSIHDGFENHKTESEFSAESVNRKSHA-TELRALHTQVEMVDTSYPDNLMEEIDDSG 863

Query: 516  QDTAEPHMYAN----EFIESSNKLNKRKIESPLDIDDVEKGSIVPFGAAPLSNRDRLVLR 683
               AE  +  N      +ES++ L+   I S ++    +  S   F    LSN+DRL+LR
Sbjct: 864  AINAEHGVSNNGPMESLVESASMLDV-SISSAVENVSNKMASTANF----LSNKDRLLLR 918

Query: 684  KQALKMKKRPVLAIGRNNVVTGVAKTIKTHFKKHPLAIVNVKGRAKGTSIQEVVFKLEQA 863
            KQALKMKKRPVLA+GR+N+VTGVAK I+ HF+KHPLAIVNVKGRAKGTS+QEVV KL++A
Sbjct: 919  KQALKMKKRPVLAVGRSNIVTGVAKAIRAHFQKHPLAIVNVKGRAKGTSVQEVVLKLQEA 978

Query: 864  TGAVMVSQEPNKVILYRGWIEGEE-PHGVKEKIKARTSTTQEMVSPQLIEAIRLECGLQS 1040
            TGAV+VSQEP+KVILYRGW  G+E   G     K   +  +  VSP+LI AIRLECGLQ 
Sbjct: 979  TGAVLVSQEPSKVILYRGWGAGDELGRGDNRNAKDSLAQNRPAVSPELIAAIRLECGLQL 1038

Query: 1041 CKEEE 1055
             +EEE
Sbjct: 1039 QQEEE 1043


>ref|XP_007031355.1| CRM family member 2, putative isoform 1 [Theobroma cacao]
            gi|508710384|gb|EOY02281.1| CRM family member 2, putative
            isoform 1 [Theobroma cacao]
          Length = 1087

 Score =  232 bits (592), Expect = 2e-58
 Identities = 159/365 (43%), Positives = 221/365 (60%), Gaps = 15/365 (4%)
 Frame = +3

Query: 6    KKQAMKLSIEAQRRESLKLHVLKLTKNIDQLKLQLI--KDDTQMNLVQSTKHKRPNTKFE 179
            K+QAMK S+E QRR+SLKLH+L LT+N++ L+ QL+  K+   M  V+ +       + E
Sbjct: 733  KRQAMKRSLEEQRRKSLKLHILNLTRNVNDLEHQLVVDKEANSMQTVEQSSLPLVQEELE 792

Query: 180  TSDQPGFVEYSHNQDNAGSEAFANDQEAMEWRGNDSTPLDLNYCMDASSYSKETIQSEKP 359
            T      VEY+ +     + +     E+ +  G++ST +  +  +   S  + + Q    
Sbjct: 793  TLQS---VEYTGSVIECPASS-GGHVESRDKDGSESTSMKNDKMVATISIRQPSKQEF-- 846

Query: 360  MNPFSHHD--ESAETELKSSFESALKETHSNTFLDEMGDRDDDYSTSLPMN------STS 515
            M P S HD  E+ +TE + S ES  +++H+ T L  +  + +   TS P N       + 
Sbjct: 847  MEPSSIHDGFENHKTESEFSAESVNRKSHA-TELRALHTQVEMVDTSYPDNLMEEIDDSG 905

Query: 516  QDTAEPHMYAN----EFIESSNKLNKRKIESPLDIDDVEKGSIVPFGAAPLSNRDRLVLR 683
               AE  +  N      +ES++ L+   I S ++    +  S   F    LSN+DRL+LR
Sbjct: 906  AINAEHGVSNNGPMESLVESASMLDV-SISSAVENVSNKMASTANF----LSNKDRLLLR 960

Query: 684  KQALKMKKRPVLAIGRNNVVTGVAKTIKTHFKKHPLAIVNVKGRAKGTSIQEVVFKLEQA 863
            KQALKMKKRPVLA+GR+N+VTGVAK I+ HF+KHPLAIVNVKGRAKGTS+QEVV KL++A
Sbjct: 961  KQALKMKKRPVLAVGRSNIVTGVAKAIRAHFQKHPLAIVNVKGRAKGTSVQEVVLKLQEA 1020

Query: 864  TGAVMVSQEPNKVILYRGWIEGEE-PHGVKEKIKARTSTTQEMVSPQLIEAIRLECGLQS 1040
            TGAV+VSQEP+KVILYRGW  G+E   G     K   +  +  VSP+LI AIRLECGLQ 
Sbjct: 1021 TGAVLVSQEPSKVILYRGWGAGDELGRGDNRNAKDSLAQNRPAVSPELIAAIRLECGLQL 1080

Query: 1041 CKEEE 1055
             +EEE
Sbjct: 1081 QQEEE 1085


>ref|XP_006482481.1| PREDICTED: chloroplastic group IIA intron splicing facilitator CRS1,
            chloroplastic-like isoform X6 [Citrus sinensis]
          Length = 1031

 Score =  230 bits (587), Expect = 8e-58
 Identities = 155/368 (42%), Positives = 204/368 (55%), Gaps = 18/368 (4%)
 Frame = +3

Query: 6    KKQAMKLSIEAQRRESLKLHVLKLTKNIDQLKLQLIKDDTQMNLVQSTKHKRPNTKFETS 185
            K++AMK S+EAQRR+SLKLHVL+LT+NI++LKLQL+KD    +L    +   P  K E  
Sbjct: 699  KREAMKRSLEAQRRQSLKLHVLELTRNIEKLKLQLVKDKEANSLETIDESILPLVKEEIG 758

Query: 186  D-QPGFVEYSHNQDNAGSEAFANDQEAMEWRGNDSTPLDLNYCMDASSYSKETIQSEKPM 362
            D QP     S        +A           G D T  + N   DA+      IQ +K  
Sbjct: 759  DMQPAECMRSDTSHEVNVQARGE-------CGADLTSTESNDTGDATIDGPPAIQQDKQT 811

Query: 363  NPFSHHDESAETELKSSFESALKETHSNTFLDEMGDRDDDYSTSLPMNSTSQDTAEPHMY 542
               +H+  ++ T                              +S P NS      EP   
Sbjct: 812  ESLTHNGVASGT------------------------------SSCPDNSMCSSDNEPRES 841

Query: 543  ANEFIESSNKLNKRKIESPLDIDDVEKGSIVPFG-----------AAPLSNRDRLVLRKQ 689
            + E  +S +  N+  IE   ++     G   P G           A  LSNRDRL+LRKQ
Sbjct: 842  SIESAKSRSSENE-PIEQSFELAKGRSGLSTPIGTGNVWNENNSRAIQLSNRDRLLLRKQ 900

Query: 690  ALKMKKRPVLAIGRNNVVTGVAKTIKTHFKKHPLAIVNVKGRAKGTSIQEVVFKLEQATG 869
            AL+MKKRPVLA+GR+N+VTGVAK IK HF+K+PLAIVNVKGRAKGTS+QEVV KLE+ATG
Sbjct: 901  ALRMKKRPVLAVGRSNIVTGVAKAIKAHFEKYPLAIVNVKGRAKGTSVQEVVAKLEEATG 960

Query: 870  AVMVSQEPNKVILYRGW-IEGEEPHGVKEKIKARTSTTQEM-----VSPQLIEAIRLECG 1031
            AV+VSQEP+KVILYRGW  E E     ++  +A+ S  +++     VS +L+ AI+LECG
Sbjct: 961  AVLVSQEPSKVILYRGWGAEDESSPRGRQNSRAKPSIVRDVRPWPAVSRELLAAIKLECG 1020

Query: 1032 LQSCKEEE 1055
            LQ  +E+E
Sbjct: 1021 LQGQQEQE 1028


>ref|XP_002517407.1| conserved hypothetical protein [Ricinus communis]
            gi|223543418|gb|EEF44949.1| conserved hypothetical
            protein [Ricinus communis]
          Length = 1009

 Score =  229 bits (585), Expect = 1e-57
 Identities = 158/368 (42%), Positives = 211/368 (57%), Gaps = 17/368 (4%)
 Frame = +3

Query: 3    NKKQAMKLSIEAQRRESLKLHVLKLTKNIDQLKLQLIKDDTQMNLVQSTKHKRPNTKFET 182
            +K++AMK S+EAQRRESLKLHVL+LT+NI+ LKL+L+                       
Sbjct: 683  SKREAMKRSLEAQRRESLKLHVLRLTRNINDLKLKLL----------------------- 719

Query: 183  SDQPGFVEYSHNQDNAGSEAFANDQEAMEWRGNDSTPLDLNYCMDASSYSKETIQSEKPM 362
                       N +  G   F            +S  + L+    AS    +  +    +
Sbjct: 720  ----------FNGNGIGRSEF------------ESLSISLSKESHASVNIIQPDEQASQI 757

Query: 363  NPFSHHD--ESAETELKSSFESALKETHSNTFLDEMGDRDDDYSTSLPMNSTSQD----- 521
            NP   +D     + E +SS ES  KETH++ F    G   D  STS P  S S++     
Sbjct: 758  NPSLLYDGIRIGKNEPESSSESLSKETHASLFTAINGGAVD--STSFPNTSMSEERGSYP 815

Query: 522  --TAEPHMYANEFIESSNKLNKRKIESPLDIDDVEKGSIVPFGAAPLSNRDRLVLRKQAL 695
              +AE  ++ N+ + S+ +     +E  + I   E   +       LSNRDRL+LRKQAL
Sbjct: 816  CVSAENCVHENKIMGSTVESTTTVLEESVSISANEDNEMQS-STICLSNRDRLMLRKQAL 874

Query: 696  KMKKRPVLAIGRNNVVTGVAKTIKTHFKKHPLAIVNVKGRAKGTSIQEVVFKLEQATGAV 875
            KMK RPVLA+GR+N+VTGVAKTIK HFKK+PLAIVNVKGRAKGTS+QEVVF+LEQATG V
Sbjct: 875  KMKNRPVLAVGRSNIVTGVAKTIKAHFKKYPLAIVNVKGRAKGTSVQEVVFQLEQATGGV 934

Query: 876  MVSQEPNKVILYRGWIEGEEP-HGVKEKI--KARTSTTQEM-----VSPQLIEAIRLECG 1031
            +VSQEP+KVILYRGW   +EP H  K+      +TS  +E      +SP+L+ AIRLECG
Sbjct: 935  LVSQEPSKVILYRGWGAFDEPGHRGKKNAHDSGKTSVVKEESSRLGMSPELMAAIRLECG 994

Query: 1032 LQSCKEEE 1055
            LQ+ +E++
Sbjct: 995  LQNKQEQK 1002


>ref|XP_006338518.1| PREDICTED: chloroplastic group IIA intron splicing facilitator CRS1,
            chloroplastic-like isoform X1 [Solanum tuberosum]
          Length = 1049

 Score =  229 bits (584), Expect = 2e-57
 Identities = 151/375 (40%), Positives = 213/375 (56%), Gaps = 22/375 (5%)
 Frame = +3

Query: 3    NKKQAMKLSIEAQRRESLKLHVLKLTKNIDQLKLQLIKDDTQMNLVQSTKHKRPNTKFET 182
            +K++AMK SIEAQRR+SLKLHVLKLT+NI+ L+ +L K++  +++       R       
Sbjct: 687  SKREAMKRSIEAQRRQSLKLHVLKLTQNIEALQSRLAKNEEMVHIQSPDIVDRQVPVTGI 746

Query: 183  SDQPGFVEYSHNQ----DNAGSEAFANDQEAMEWRGNDSTPLDLNYCMDASSYSKETIQS 350
            SD  G   Y  +     +++G  A   D  + +   +DS+  D N             Q 
Sbjct: 747  SDAAGGTNYQSSSASPTEDSGDAAEDTDPSSQKELSSDSSDTDHNS------------QQ 794

Query: 351  EKPMNPFSHHDESAET-----ELKSSFESALKETHSNTFLDEMGDRDDDYSTSLPMNSTS 515
            E P++PF  ++   E      + +    S++KE+ S  F   +  +    + S  ++ +S
Sbjct: 795  EFPIDPFFQYEGKVEAVGDTIQPEHQSISSIKESKS-MFNVNVDQKTFGSAVSESVSKSS 853

Query: 516  QDTAEPHMYANEFIESSNKLNKRKIESPLDIDDVE--------KGSIVPFGAAPLSNRDR 671
            +   + H           +++ +K  S L     +        +   +P     LSNR+R
Sbjct: 854  RGEVKIHFSETRSFNKPREVDDKKEVSQLPSVKPQQALRSTRSRSEGMPTRKVQLSNRER 913

Query: 672  LVLRKQALKMKKRPVLAIGRNNVVTGVAKTIKTHFKKHPLAIVNVKGRAKGTSIQEVVFK 851
            L+LRKQALKMKK+PVLA+GR+N+VTGVAK IK HFKK+PLAIVNVKGRAKGTS++EVVFK
Sbjct: 914  LLLRKQALKMKKQPVLAVGRSNIVTGVAKNIKEHFKKYPLAIVNVKGRAKGTSVREVVFK 973

Query: 852  LEQATGAVMVSQEPNKVILYRGWIEGEE-----PHGVKEKIKARTSTTQEMVSPQLIEAI 1016
            LEQATGAV+VSQEP+KVILYRGW  G E      +  +    +R       +SP+LI AI
Sbjct: 974  LEQATGAVLVSQEPSKVILYRGWGPGGERGASNGNDTRNSRNSREQKELMSISPELISAI 1033

Query: 1017 RLECGLQSCKEEEGA 1061
            RLECGLQS  + E A
Sbjct: 1034 RLECGLQSNHDMEVA 1048


>ref|XP_004164655.1| PREDICTED: LOW QUALITY PROTEIN: chloroplastic group IIA intron
            splicing facilitator CRS1, chloroplastic-like [Cucumis
            sativus]
          Length = 1053

 Score =  227 bits (578), Expect = 9e-57
 Identities = 143/356 (40%), Positives = 205/356 (57%), Gaps = 11/356 (3%)
 Frame = +3

Query: 3    NKKQAMKLSIEAQRRESLKLHVLKLTKNIDQLKLQLIKDDTQMNLVQ-STKHKRPNTK-- 173
            NKK+A+K SIEAQRR+SLKLHVLKLT+N+++LKL+L +D   + +    T   +P  +  
Sbjct: 705  NKKEALKRSIEAQRRKSLKLHVLKLTQNVEELKLKLDEDKRAIGMESIKTSTFQPGKEGI 764

Query: 174  --FETSDQPGFVEYSHNQDNAGSEAFANDQEAMEWRGNDSTPLDLNYCMDASSYSKETIQ 347
               +T+     V  S    +A +     + E  + +    T      C+D S    +T  
Sbjct: 765  DEIQTTGSLKLVADSACLTHAENSTCLEENEVAKVKKGHGTHSSGTICLDTSVNRLQTTN 824

Query: 348  SEKPMNPFSHHDESAETELKSSFESALKETHSNTFLDEMGD------RDDDYSTSLPMNS 509
                +    H+ + +   ++ SFES  +  H+   +D   +      +    S S   NS
Sbjct: 825  DVFLI----HNGDQSNATVRPSFESVRQGNHAKVPMDTNAEFGTIEPQSGANSLSGESNS 880

Query: 510  TSQDTAEPHMYANEFIESSNKLNKRKIESPLDIDDVEKGSIVPFGAAPLSNRDRLVLRKQ 689
             + D    H+  N+  + S +L + K    L    + +    P     LSN++RL+LR+Q
Sbjct: 881  GTSDAVH-HVAMNKDTKPSVRLEEEKSPPLLSSTRINQPGYFPANVPQLSNKERLLLRRQ 939

Query: 690  ALKMKKRPVLAIGRNNVVTGVAKTIKTHFKKHPLAIVNVKGRAKGTSIQEVVFKLEQATG 869
            ALKMKK PVL++G++NV+TGVAK IK HFKKH LAIVNVKGRAKGTS+QE+VFKLEQATG
Sbjct: 940  ALKMKKLPVLSVGKSNVITGVAKAIKEHFKKHSLAIVNVKGRAKGTSVQEIVFKLEQATG 999

Query: 870  AVMVSQEPNKVILYRGWIEGEEPHGVKEKIKARTSTTQEMVSPQLIEAIRLECGLQ 1037
            AV+VSQEP+KVILYRGW   EE    K  +   +   +  +S +L+ AIR+ECGL+
Sbjct: 1000 AVLVSQEPSKVILYRGW--EEEDRKQKATMMKNSGEDRLSMSSELMAAIRIECGLR 1053


>ref|XP_004147480.1| PREDICTED: chloroplastic group IIA intron splicing facilitator CRS1,
            chloroplastic-like [Cucumis sativus]
          Length = 1032

 Score =  227 bits (578), Expect = 9e-57
 Identities = 144/356 (40%), Positives = 206/356 (57%), Gaps = 11/356 (3%)
 Frame = +3

Query: 3    NKKQAMKLSIEAQRRESLKLHVLKLTKNIDQLKLQLIKDDTQMNLVQ---ST--KHKRPN 167
            NKK+A+K SIEAQRR+SLKLHVLKLT+N+++LKL+L +D   + +     ST  + K   
Sbjct: 684  NKKEALKRSIEAQRRKSLKLHVLKLTQNVEELKLKLDEDKRAIGMESIKTSTFQQGKEGI 743

Query: 168  TKFETSDQPGFVEYSHNQDNAGSEAFANDQEAMEWRGNDSTPLDLNYCMDASSYSKETIQ 347
             + +T+     V  S    +A +     + E  + +    T      C+D S    +T  
Sbjct: 744  DEIQTTGSLKLVADSACLTHAENSTCLEENEVAKVKKGHGTHSSGTICLDTSVNRLQTTN 803

Query: 348  SEKPMNPFSHHDESAETELKSSFESALKETHSNTFLDEMGD------RDDDYSTSLPMNS 509
                +    H+ + +   ++ SFES  +  H+   +D   +      +    S S   NS
Sbjct: 804  DVFLI----HNGDQSNATVRPSFESVRQGNHAKVPMDTNAEFGTIEPQSGANSLSGESNS 859

Query: 510  TSQDTAEPHMYANEFIESSNKLNKRKIESPLDIDDVEKGSIVPFGAAPLSNRDRLVLRKQ 689
             + D    H+  N+  + S +L + K    L    + +    P     LSN++RL+LR+Q
Sbjct: 860  GTSDAVH-HVAMNKDTKPSVRLEEEKSPPLLSSTRINQPGYFPANVPQLSNKERLLLRRQ 918

Query: 690  ALKMKKRPVLAIGRNNVVTGVAKTIKTHFKKHPLAIVNVKGRAKGTSIQEVVFKLEQATG 869
            ALKMKK PVL++G++NV+TGVAK IK HFKKH LAIVNVKGRAKGTS+QE+VFKLEQATG
Sbjct: 919  ALKMKKLPVLSVGKSNVITGVAKAIKEHFKKHSLAIVNVKGRAKGTSVQEIVFKLEQATG 978

Query: 870  AVMVSQEPNKVILYRGWIEGEEPHGVKEKIKARTSTTQEMVSPQLIEAIRLECGLQ 1037
            AV+VSQEP+KVILYRGW   EE    K  +   +   +  +S +L+ AIR+ECGL+
Sbjct: 979  AVLVSQEPSKVILYRGW--EEEDRKQKATMMKNSGEDRLSMSSELMAAIRIECGLR 1032


>ref|XP_004232267.1| PREDICTED: chloroplastic group IIA intron splicing facilitator CRS1,
            chloroplastic-like [Solanum lycopersicum]
          Length = 1049

 Score =  226 bits (575), Expect = 2e-56
 Identities = 151/379 (39%), Positives = 215/379 (56%), Gaps = 26/379 (6%)
 Frame = +3

Query: 3    NKKQAMKLSIEAQRRESLKLHVLKLTKNIDQLKLQLIKDDTQMNLVQSTKHKRPNTKFET 182
            +K++AMK SIEAQRR+SLKLHVLKLT+NI+ L+ +L K++   ++       R       
Sbjct: 687  SKREAMKRSIEAQRRQSLKLHVLKLTQNIEALQSRLAKNEEISHIQSPDIVDRQVPVMGI 746

Query: 183  SDQPGFVEY----SHNQDNAGSEAFANDQEAMEWRGNDSTPLDLNYCMDASSYSKETIQS 350
            SD  G   Y    +   +++G  A   D  + +   ND +  D               Q 
Sbjct: 747  SDAAGGTNYQSIVASPIEDSGDAAEDTDPSSQKELSNDFSDTD------------HDSQQ 794

Query: 351  EKPMNPFSHHDESAET-----ELKSSFESALKETHS--NTFLDEMGDRDDDYSTSLPMNS 509
            E P+NPF  ++   E      + +    S++KE+ S  N  +D+     + + +++  + 
Sbjct: 795  EFPINPFFQYEGKVEAMGDTIQPQHQSISSIKESKSMFNVNVDQ-----ETFGSAVSESV 849

Query: 510  TSQDTAEPHMYANE---FIESSNKLNKRKIESPLDIDDVE-------KGSIVPFGAAPLS 659
            +     E  ++ +E   F +     NK ++  P  +   +       +   +      LS
Sbjct: 850  SKSSRGEVKIHFSETRSFNKPREVNNKMEVSQPPPVKPQQTLRSTRSRSEGMSTRRVQLS 909

Query: 660  NRDRLVLRKQALKMKKRPVLAIGRNNVVTGVAKTIKTHFKKHPLAIVNVKGRAKGTSIQE 839
            NR+RL+LRKQALKMKK+PVLA+GR+N+VTGVAK IK HFKK+PLAIVNVKGRAKGTS++E
Sbjct: 910  NRERLLLRKQALKMKKQPVLAVGRSNIVTGVAKNIKEHFKKYPLAIVNVKGRAKGTSVRE 969

Query: 840  VVFKLEQATGAVMVSQEPNKVILYRGWIEGEEPHGVKEKIKARTSTTQEM-----VSPQL 1004
            VVFKLEQATGAV+VSQEP+KVILYRGW  G E         + +  ++E      +SP+L
Sbjct: 970  VVFKLEQATGAVLVSQEPSKVILYRGWGPGGERGASNGNDTSNSKNSREQKELMSISPEL 1029

Query: 1005 IEAIRLECGLQSCKEEEGA 1061
            I AIRLECGLQS  + E A
Sbjct: 1030 ISAIRLECGLQSNNDMEVA 1048


>ref|XP_003581323.1| PREDICTED: chloroplastic group IIA intron splicing facilitator CRS1,
            chloroplastic-like [Brachypodium distachyon]
          Length = 1053

 Score =  223 bits (569), Expect = 1e-55
 Identities = 144/346 (41%), Positives = 205/346 (59%)
 Frame = +3

Query: 3    NKKQAMKLSIEAQRRESLKLHVLKLTKNIDQLKLQLIKDDTQMNLVQSTKHKRPNTKFET 182
            NK+ A+K S+E QR++SLKLHVL L+KNID L+ Q++          S  H+      + 
Sbjct: 740  NKRDALKRSVEYQRQKSLKLHVLNLSKNIDYLRGQMV----------SFIHENKGIN-DL 788

Query: 183  SDQPGFVEYSHNQDNAGSEAFANDQEAMEWRGNDSTPLDLNYCMDASSYSKETIQSEKPM 362
            S+  G +E     +    E F ++ +     G D T   LN  +  S    +  Q++   
Sbjct: 789  SNSSGTLE--EKSEEVAPEGFDSEGQDSTSSGTDGT---LN--LTKSGVPLDDRQNKLCF 841

Query: 363  NPFSHHDESAETELKSSFESALKETHSNTFLDEMGDRDDDYSTSLPMNSTSQDTAEPHMY 542
            N   H D+S+E          L E+ S    +++    +  S+++  +S +   +E +  
Sbjct: 842  N--KHKDDSSEAS-----RPCLNESSSTVSSNDLIKYQNRLSSAIACHSDND--SESYSR 892

Query: 543  ANEFIESSNKLNKRKIESPLDIDDVEKGSIVPFGAAPLSNRDRLVLRKQALKMKKRPVLA 722
              E ++    L++ K+       D +    +PF  APLSNR+RL+LRKQALKMKKRPVLA
Sbjct: 893  DVEIVKPCQALDEPKL-------DEKCTPYLPFRTAPLSNRERLMLRKQALKMKKRPVLA 945

Query: 723  IGRNNVVTGVAKTIKTHFKKHPLAIVNVKGRAKGTSIQEVVFKLEQATGAVMVSQEPNKV 902
            IGRNNV+TGVAKTI+THFKKHPLAIVN+K RA GT +Q+++ +LE+ATG+V+VS+EPNKV
Sbjct: 946  IGRNNVITGVAKTIQTHFKKHPLAIVNIKNRADGTPVQQLISELERATGSVLVSREPNKV 1005

Query: 903  ILYRGWIEGEEPHGVKEKIKARTSTTQEMVSPQLIEAIRLECGLQS 1040
            ILYRGW  G E      K  +     +E++SPQL+EAIRLECGL S
Sbjct: 1006 ILYRGW--GAEVTQKSSKENSTNEVEKEVISPQLLEAIRLECGLHS 1049


>ref|XP_004489340.1| PREDICTED: chloroplastic group IIA intron splicing facilitator CRS1,
            chloroplastic-like isoform X2 [Cicer arietinum]
          Length = 834

 Score =  222 bits (565), Expect = 3e-55
 Identities = 151/363 (41%), Positives = 209/363 (57%), Gaps = 18/363 (4%)
 Frame = +3

Query: 3    NKKQAMKLSIEAQRRESLKLHVLKLTKNIDQLKLQLIKDDTQMNLVQSTKHKRPNTKFET 182
            NKKQA+K SIEAQRRE+LKLHVLKL KNI++LKLQ++KD+     +  T           
Sbjct: 479  NKKQALKRSIEAQRREALKLHVLKLDKNINELKLQMVKDEASSKQIAETLRSDL-----A 533

Query: 183  SDQPGFVEYSHNQDNAGSEAFANDQEAMEWR------GNDSTPLDLNYCMDASSYSKETI 344
             D+ G    S N  N+  EA  ++Q+A+E +      G  S  L+ N   +AS  +++  
Sbjct: 534  IDKHGGSSNSINC-NSPKEASVHNQQAIEEQHIELIDGVSSNSLNCNSSKEASVDNQQQA 592

Query: 345  QSEKPMNPF---SHHDESAETELKSSFESALKETHSNTFLDEMGDR--DDDYSTSLPMNS 509
              E+ +      S +  S+  E     + A++E +    +D  G R  + + S  L    
Sbjct: 593  IEEQHIELIDGASSNLISSPEEASVGNQRAIQEQYIE-LIDTGGARQGEPESSAGLVHQE 651

Query: 510  TSQDTAEPHMYANEFIESSNKLNKRKIESPLDIDD-----VEKGSI-VPFGAAPLSNRDR 671
               D     +       S+NK  +  + S     +     + K SI +P  +  LSNR+R
Sbjct: 652  RQLDEESDSVVDTGHCVSNNKAMEASVASLKSDPEPSAPVINKSSIELPSRSLYLSNRER 711

Query: 672  LVLRKQALKMKKRPVLAIGRNNVVTGVAKTIKTHFKKHPLAIVNVKGRAKGTSIQEVVFK 851
            L+LR+QAL MKKRP+LAIG++N VTG+AK IK HF+KHP  IVNVKGRAKGTS+ E+V K
Sbjct: 712  LLLRRQALNMKKRPLLAIGKSNTVTGLAKAIKDHFRKHPFVIVNVKGRAKGTSVHELVSK 771

Query: 852  LEQATGAVMVSQEPNKVILYRGWIEGEEPHGVKEKIK-ARTSTTQEMVSPQLIEAIRLEC 1028
            LE ATGAV+VSQEP+K+ILYRGW  G +P       K  +    +  VSP+L+EAIR+EC
Sbjct: 772  LEHATGAVLVSQEPSKIILYRGWGAGTKPGTYLNDSKLGKDGGAKPTVSPELLEAIRIEC 831

Query: 1029 GLQ 1037
            GLQ
Sbjct: 832  GLQ 834


>ref|XP_004489339.1| PREDICTED: chloroplastic group IIA intron splicing facilitator CRS1,
            chloroplastic-like isoform X1 [Cicer arietinum]
          Length = 1019

 Score =  222 bits (565), Expect = 3e-55
 Identities = 151/363 (41%), Positives = 209/363 (57%), Gaps = 18/363 (4%)
 Frame = +3

Query: 3    NKKQAMKLSIEAQRRESLKLHVLKLTKNIDQLKLQLIKDDTQMNLVQSTKHKRPNTKFET 182
            NKKQA+K SIEAQRRE+LKLHVLKL KNI++LKLQ++KD+     +  T           
Sbjct: 664  NKKQALKRSIEAQRREALKLHVLKLDKNINELKLQMVKDEASSKQIAETLRSDL-----A 718

Query: 183  SDQPGFVEYSHNQDNAGSEAFANDQEAMEWR------GNDSTPLDLNYCMDASSYSKETI 344
             D+ G    S N  N+  EA  ++Q+A+E +      G  S  L+ N   +AS  +++  
Sbjct: 719  IDKHGGSSNSINC-NSPKEASVHNQQAIEEQHIELIDGVSSNSLNCNSSKEASVDNQQQA 777

Query: 345  QSEKPMNPF---SHHDESAETELKSSFESALKETHSNTFLDEMGDR--DDDYSTSLPMNS 509
              E+ +      S +  S+  E     + A++E +    +D  G R  + + S  L    
Sbjct: 778  IEEQHIELIDGASSNLISSPEEASVGNQRAIQEQYIE-LIDTGGARQGEPESSAGLVHQE 836

Query: 510  TSQDTAEPHMYANEFIESSNKLNKRKIESPLDIDD-----VEKGSI-VPFGAAPLSNRDR 671
               D     +       S+NK  +  + S     +     + K SI +P  +  LSNR+R
Sbjct: 837  RQLDEESDSVVDTGHCVSNNKAMEASVASLKSDPEPSAPVINKSSIELPSRSLYLSNRER 896

Query: 672  LVLRKQALKMKKRPVLAIGRNNVVTGVAKTIKTHFKKHPLAIVNVKGRAKGTSIQEVVFK 851
            L+LR+QAL MKKRP+LAIG++N VTG+AK IK HF+KHP  IVNVKGRAKGTS+ E+V K
Sbjct: 897  LLLRRQALNMKKRPLLAIGKSNTVTGLAKAIKDHFRKHPFVIVNVKGRAKGTSVHELVSK 956

Query: 852  LEQATGAVMVSQEPNKVILYRGWIEGEEPHGVKEKIK-ARTSTTQEMVSPQLIEAIRLEC 1028
            LE ATGAV+VSQEP+K+ILYRGW  G +P       K  +    +  VSP+L+EAIR+EC
Sbjct: 957  LEHATGAVLVSQEPSKIILYRGWGAGTKPGTYLNDSKLGKDGGAKPTVSPELLEAIRIEC 1016

Query: 1029 GLQ 1037
            GLQ
Sbjct: 1017 GLQ 1019


>gb|EYU44699.1| hypothetical protein MIMGU_mgv1a000630mg [Mimulus guttatus]
          Length = 1040

 Score =  220 bits (561), Expect = 9e-55
 Identities = 153/366 (41%), Positives = 210/366 (57%), Gaps = 15/366 (4%)
 Frame = +3

Query: 3    NKKQAMKLSIEAQRRESLKLHVLKLTKNIDQLKLQLIKDDTQMNLVQSTKHKRPNTKFET 182
            +K++AMK S+EAQRRESLKLHVLKL+KNID+LKL++ KD+            RP+    T
Sbjct: 694  SKREAMKRSLEAQRRESLKLHVLKLSKNIDELKLKMAKDENT---------NRPHL---T 741

Query: 183  SD-QPGFVEYSHNQD--NAGSEAFANDQEAMEWRGNDSTPLDLNYCMDAS-SYSKETIQS 350
             D + GFV  SH  D  N   E   +  E          P D++   +   +Y  ET ++
Sbjct: 742  EDLELGFVRESHETDATNKDPEEPMHISEDTVHIAQKDLPGDVSLQSEVKVNYLFETTEA 801

Query: 351  EKPMNPFSHHDESAETELKSSFESALKETHSNTFLDEMGDRDDDYSTSLPMN----STSQ 518
            E  + P S  +E       +SF     +  +  F+     R  D   S P       T +
Sbjct: 802  E--VQPTSLSNEG------NSFSDKNNQIGNMEFV--RSPRSQDRRNSSPSTYIRPQTGR 851

Query: 519  DTAEPHMYANEFIESSNKLNKRKIESPLDIDDVEKGSIVPFGAAPLSNRDRLVLRKQALK 698
              ++   Y N  IE S        + P+     E+ S++P  +  LSN++RL+LRKQAL+
Sbjct: 852  RKSDGGGYRNVDIEPSG-------QKPMK----ERPSLMPSRSVQLSNKERLLLRKQALR 900

Query: 699  MKKRPVLAIGRNNVVTGVAKTIKTHFKKHPLAIVNVKGRAKGTSIQEVVFKLEQATGAVM 878
            MKK P+LA+G+ NVVTGV KTIK HF+KHPLAIVN+KGRAKGTS QEV++ LEQ+TGAV+
Sbjct: 901  MKKIPILAVGKRNVVTGVTKTIKEHFEKHPLAIVNIKGRAKGTSAQEVIYNLEQSTGAVL 960

Query: 879  VSQEPNKVILYRGW---IEGEEPHGVKEKIKARTST----TQEMVSPQLIEAIRLECGLQ 1037
            VSQEP+KVILYRGW    + E      +  K  ++     T+ ++SP+LI A+RLECGL+
Sbjct: 961  VSQEPSKVILYRGWGFDTDSESNMRQNQDFKYDSTNKEVKTRPLISPELISAMRLECGLK 1020

Query: 1038 SCKEEE 1055
               E E
Sbjct: 1021 PVDEIE 1026


>gb|EEC77426.1| hypothetical protein OsI_16218 [Oryza sativa Indica Group]
          Length = 818

 Score =  220 bits (561), Expect = 9e-55
 Identities = 149/359 (41%), Positives = 203/359 (56%), Gaps = 9/359 (2%)
 Frame = +3

Query: 3    NKKQAMKLSIEAQRRESLKLHVLKLTKNIDQLKLQLIKDDTQMNLVQSTKHKRPNTKFET 182
            NKK A+K S+E QR +SLKLHVL L+KNID LK Q+     ++  V  T           
Sbjct: 490  NKKDALKRSVEYQRYKSLKLHVLNLSKNIDYLKDQMFFKQMEVQPVTPTN---------- 539

Query: 183  SDQPGFVEYSHNQD----NAGSEAFANDQEAMEWRGNDSTPLDLNYCMDASSYSKETIQS 350
                G     HNQ     N  S    + +E +     +     +  C    S ++ T   
Sbjct: 540  ----GMNSGHHNQGILDLNVNSGTLVDKKEEVSEVLPECAKSVVVECSSGESETEGTSVL 595

Query: 351  EKPMNPFSHHDESAETELK-SSFESALKETHSNTFLDEMGDRDDDYSTSLPMNSTSQDTA 527
             K   P    D    T L  S     L ET S+  L E      + +   P++S+    +
Sbjct: 596  TKSGVPL---DVMQNTLLCFSKHTDDLSETTSSC-LTESTSTSSESTHQSPLSSSVMHNS 651

Query: 528  EPHMYA-NEFIESSNKLNKRKIESPLDIDDVEKGSIVPFGAAPLSNRDRLVLRKQALKMK 704
            + H  + ++F+ +   +++ K++        EK S +P  AAPLSNR+RL+LRKQALKMK
Sbjct: 652  DSHRVSGSKFVGTLTPVHELKLD--------EKSSQLPSAAAPLSNRERLMLRKQALKMK 703

Query: 705  KRPVLAIGRNNVVTGVAKTIKTHFKKHPLAIVNVKGRAKGTSIQEVVFKLEQATGAVMVS 884
            KRPVLA+GRNNV+TGVAK IKTHFKKHPLAIVN+K RA GT IQ+++ +LE+ATG+V+VS
Sbjct: 704  KRPVLAVGRNNVITGVAKAIKTHFKKHPLAIVNIKNRADGTPIQQLISELEEATGSVLVS 763

Query: 885  QEPNKVILYRGWIEGEEPHGVKEKIKARTSTTQ---EMVSPQLIEAIRLECGLQSCKEE 1052
            +EPNKVILYRGW  G +    +  +    ST Q   E++SPQL+EA+RLECGL   + E
Sbjct: 764  REPNKVILYRGW--GADV--AQNSLSGNNSTEQVEKEVISPQLLEAVRLECGLHPGESE 818