BLASTX nr result
ID: Akebia27_contig00002094
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Akebia27_contig00002094
(3231 letters)
Database: ./nr
38,876,450 sequences; 13,856,398,315 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
emb|CBI28783.3| unnamed protein product [Vitis vinifera] 1015 0.0
ref|XP_002300344.1| DNA topoisomerase family protein [Populus tr... 1015 0.0
ref|XP_002265386.1| PREDICTED: DNA topoisomerase 1-like [Vitis v... 1001 0.0
ref|XP_006474977.1| PREDICTED: DNA topoisomerase 1-like isoform ... 999 0.0
ref|XP_006452479.1| hypothetical protein CICLE_v10007398mg [Citr... 996 0.0
ref|XP_002266885.1| PREDICTED: DNA topoisomerase 1 [Vitis vinife... 989 0.0
ref|XP_002529020.1| DNA topoisomerase type I, putative [Ricinus ... 986 0.0
ref|XP_007131473.1| hypothetical protein PHAVU_011G016600g [Phas... 957 0.0
ref|XP_007020664.1| DNA topoisomerase I alpha isoform 1 [Theobro... 949 0.0
dbj|BAG31376.1| topoisomerase I [Camptotheca acuminata] 941 0.0
ref|XP_002317355.1| DNA topoisomerase family protein [Populus tr... 939 0.0
dbj|BAG31377.1| topoisomerase I [Catharanthus roseus] 934 0.0
ref|XP_004149585.1| PREDICTED: DNA topoisomerase 1-like [Cucumis... 929 0.0
ref|NP_001157806.1| topoisomerase I [Zea mays] gi|240065169|gb|A... 925 0.0
gb|EMS46223.1| DNA topoisomerase 1 [Triticum urartu] 919 0.0
dbj|BAK32960.1| topoisomerase I [Ophiorrhiza pseudofasciculata] 916 0.0
dbj|BAG31375.1| topoisomerase I [Ophiorrhiza japonica] 916 0.0
ref|XP_006364175.1| PREDICTED: LOW QUALITY PROTEIN: DNA topoisom... 914 0.0
ref|XP_006659124.1| PREDICTED: DNA topoisomerase 1-like [Oryza b... 914 0.0
ref|XP_007201211.1| hypothetical protein PRUPE_ppa001622mg [Prun... 914 0.0
>emb|CBI28783.3| unnamed protein product [Vitis vinifera]
Length = 724
Score = 1015 bits (2625), Expect = 0.0
Identities = 536/772 (69%), Positives = 590/772 (76%), Gaps = 2/772 (0%)
Frame = -2
Query: 2678 EKKPLNKSPIE--PNADSDDDKPLSARIFAASTSLPRNNSTHVSEGLSVXXXXXXXXXEI 2505
E K L P+ + DS+DDKPLSA++ S LP+ NS HV +GLS
Sbjct: 2 ENKQLINPPVANGESEDSEDDKPLSAKL---SARLPKGNS-HVLKGLSSPVLQSQ----- 52
Query: 2504 PFSLRFKFKSGAGSSSEKFYDSNEEKPFASKIQQNGSIKGGNELVKSPKVLNKRTLSDAN 2325
K+ SS DS +E P K+Q S KG + S K+L+ + LS +
Sbjct: 53 --------KTKVDSSD----DSEDEIPLLLKLQLK-SRKGAS----SSKLLDSKGLS--S 93
Query: 2324 PSAQCPIKKQKLSDISVHGKIGQAHVKAEQKIEDDDDDVPLSQRMXXXXXXXXXXXXXXX 2145
P++ P + QK A V + +D +D++PLS +
Sbjct: 94 PASSRP-QSQK------------AKVNNKNLSDDSEDEIPLSSKFRLKTVSSDNKKASKT 140
Query: 2144 XKVFFDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVPPSFGEGKKWSTLEHNGVIF 1965
+ VPP+ GEG+KW+TLEHNGVIF
Sbjct: 141 KVI--------PSSRKKATKKAKKSKKLAKSSKYSKSTKVPPNSGEGQKWTTLEHNGVIF 192
Query: 1964 PPPYKSHGVKMLYNGQPVDLTPEQEEVATMFAVMKDTEYATKPRFIENFMNDWRLILGKN 1785
PPPYK HGVKMLYNG+PVDLTPEQEEVATMFAVMKDT+YATKPRFIENFMNDWR+ LGKN
Sbjct: 193 PPPYKPHGVKMLYNGRPVDLTPEQEEVATMFAVMKDTDYATKPRFIENFMNDWRVRLGKN 252
Query: 1784 HIIKKFELCNFTPIYEWHQSEKEKKKQMSTXXXXXXXXXXXXXXXKYMWAIVDGVKEKVG 1605
H+IKKFELC+FTPIYEWH+ EKEKKKQM+T KYMWA+VDGVKEKVG
Sbjct: 253 HVIKKFELCDFTPIYEWHEKEKEKKKQMTTEEKKALKEEKLKQEDKYMWAVVDGVKEKVG 312
Query: 1604 NFRVEPPGLFRGRGEHPKMGKLKRRIRPSDITINIGKDAPIPECPIPGQRWKEVKHDNTV 1425
NFRVEPPGLFRGRGEHPKMGKLK+RI PSDITINIGK+AP+PECPIPG+RWKEV+HDNTV
Sbjct: 313 NFRVEPPGLFRGRGEHPKMGKLKKRICPSDITINIGKEAPVPECPIPGERWKEVRHDNTV 372
Query: 1424 TWLAFWNDPINPKEFKYVFLAASSSLKGQSDKEKYEKARVLKDYIHDIRATYTKDFASKD 1245
TWLAFWNDPINPKEFKYVFLAASSSLKGQSDKEKYEKAR+LKDYI +IRATYTKDF +KD
Sbjct: 373 TWLAFWNDPINPKEFKYVFLAASSSLKGQSDKEKYEKARLLKDYIQNIRATYTKDFTNKD 432
Query: 1244 ITKRQIAVATYLIDKLALRAGNEKDDDEADTVGCCTLKVENVELVPPNKLQFDFLGKDSI 1065
KRQIAVATYLIDKLALRAGNEKDDDEADTVGCCTLKVENV LVPPNKL+FDFLGKDSI
Sbjct: 433 TMKRQIAVATYLIDKLALRAGNEKDDDEADTVGCCTLKVENVALVPPNKLEFDFLGKDSI 492
Query: 1064 RYFNTVEVELPVYKAIGQFKSGKSEGDDLFDKLDTSKLNAHLKELMPGLTAKVFRTYNAS 885
RYFNTVEVELPVYKAIGQFK+GKS GDDLFDKLDTSKLNAHLKELMPGLTAKVFRTYNAS
Sbjct: 493 RYFNTVEVELPVYKAIGQFKTGKSGGDDLFDKLDTSKLNAHLKELMPGLTAKVFRTYNAS 552
Query: 884 ITLDEMLNRETKDGEVAEKIVIYQHANKEVAIICNHQRSVSKSHSAQMSRLSEKMDELKA 705
ITLDEMLNRE + G+ EKIVIYQHANKEVAIICNHQRSVSKSH QMSRLSEKM EL+
Sbjct: 553 ITLDEMLNREARGGDAMEKIVIYQHANKEVAIICNHQRSVSKSHDVQMSRLSEKMRELQG 612
Query: 704 VLDELKTDLVRAKKGKPPLNDADGKPKKNLTPEALEKKIAQTNAKIEKMERDMKTKEDLK 525
VLDELKTDL RAKKGKPPL D+DGKPKKN+TPE LE+KIAQTN KIEKMERDMKTKEDLK
Sbjct: 613 VLDELKTDLARAKKGKPPLKDSDGKPKKNMTPEVLERKIAQTNTKIEKMERDMKTKEDLK 672
Query: 524 TVALGTSKINYLDPRISVAWCKRHEVPIEKIFNKSLLAKFAWSMDVDPTFRF 369
TVALGTSKINYLDPRISVAWCKR EVPIEKIFNKSLLAKFAW+MDVDP+FRF
Sbjct: 673 TVALGTSKINYLDPRISVAWCKRQEVPIEKIFNKSLLAKFAWAMDVDPSFRF 724
>ref|XP_002300344.1| DNA topoisomerase family protein [Populus trichocarpa]
gi|222847602|gb|EEE85149.1| DNA topoisomerase family
protein [Populus trichocarpa]
Length = 877
Score = 1015 bits (2625), Expect = 0.0
Identities = 553/873 (63%), Positives = 619/873 (70%), Gaps = 10/873 (1%)
Frame = -2
Query: 2957 PIVFKRS-NITSKQKQLNLEIKKPSF--QRHDGSS-----GKHVADSFSPKNQKSSLEKG 2802
PIVFKR N TSKQ QLN E KKPS Q +G S GK S + KSS
Sbjct: 24 PIVFKRGGNSTSKQNQLNPEAKKPSSSSQNSNGQSLNLQKGKSPIPSSNASPMKSSTGSP 83
Query: 2801 KXXXXXXXXXXXXXXXXXXXXXXXADKSKHSSEKKLAINDREKKPLNKSPIEPNADSDDD 2622
K ++ + K++ N +++ KS ++ + DS+DD
Sbjct: 84 KASASSAKASPLKSPLTYTRALTSSNDQLKQASKQVVSNAVKEE--TKSIVD-DEDSEDD 140
Query: 2621 KPLSARIFAASTSLPRNNST--HVSEGLSVXXXXXXXXXEIPFSLRFKFKSGAGSSSEKF 2448
KPLS+RI ++ ++ + + HV + S E+P S RF KS AG+SS K
Sbjct: 141 KPLSSRIKGSTNNVNKGVTAPAHVKDEPS-------DDDEVPLSSRFAMKSNAGTSSSKS 193
Query: 2447 YDSNEEKPFASKIQQNGSIKGGNELVKSPKVLNKRTLSDANPSAQCPIKKQKLSDISVHG 2268
S+E +PF SK Q NGS K + KS V KR + + PS KK KL D
Sbjct: 194 IRSSEIRPFPSKSQLNGSTKNDKQQ-KSSVVPTKRPMDNKVPSNHSSAKKPKLLDACTTT 252
Query: 2267 KIGQAHVKAEQKIEDDDDDVPLSQRMXXXXXXXXXXXXXXXXKVFFDXXXXXXXXXXXXX 2088
K+ Q VK EQK DDDD + +SQRM F
Sbjct: 253 KVKQVTVKVEQKA-DDDDHLTISQRMKKADSSANKSS-------FAKKKVTKVVSSSLKK 304
Query: 2087 XXXXXXXXXXXXXXXXXXXXVPPSFGEGKKWSTLEHNGVIFPPPYKSHGVKMLYNGQPVD 1908
P S KKW+TL HNGVIFPPPYK HGVK+LY G+P+D
Sbjct: 305 TTQKNKKQMKNSKYSKSTKVQPGSSDGQKKWTTLVHNGVIFPPPYKPHGVKILYKGKPID 364
Query: 1907 LTPEQEEVATMFAVMKDTEYATKPRFIENFMNDWRLILGKNHIIKKFELCNFTPIYEWHQ 1728
LTPEQEEVATMFAVMKDT+Y KP+F +NF NDWR +LGKNH+I+K + C+F PIYEWHQ
Sbjct: 365 LTPEQEEVATMFAVMKDTDYVQKPQFRQNFWNDWRKLLGKNHVIQKLDDCDFNPIYEWHQ 424
Query: 1727 SEKEKKKQMSTXXXXXXXXXXXXXXXKYMWAIVDGVKEKVGNFRVEPPGLFRGRGEHPKM 1548
EKEKKKQMST KYMWAIV+GVKEKVGNFRVEPPGLFRGRGEHPKM
Sbjct: 425 QEKEKKKQMSTEEKKVLKEEKLKQEEKYMWAIVNGVKEKVGNFRVEPPGLFRGRGEHPKM 484
Query: 1547 GKLKRRIRPSDITINIGKDAPIPECPIPGQRWKEVKHDNTVTWLAFWNDPINPKEFKYVF 1368
GKLK RIRPSDITINIGKDAPIPECPIPG+RWKEVKHDNTVTWLAFWNDPINPKEFKYVF
Sbjct: 485 GKLKSRIRPSDITINIGKDAPIPECPIPGERWKEVKHDNTVTWLAFWNDPINPKEFKYVF 544
Query: 1367 LAASSSLKGQSDKEKYEKARVLKDYIHDIRATYTKDFASKDITKRQIAVATYLIDKLALR 1188
LAASSSLKGQSDKEKYEKAR LKDYIH+IRA YTKDFASKDITKRQIAVATYLIDKLALR
Sbjct: 545 LAASSSLKGQSDKEKYEKARKLKDYIHNIRAAYTKDFASKDITKRQIAVATYLIDKLALR 604
Query: 1187 AGNEKDDDEADTVGCCTLKVENVELVPPNKLQFDFLGKDSIRYFNTVEVELPVYKAIGQF 1008
AGNEKDDDEADTVGCCTLKV NVE +PPNKL+FDFLGKDSIRY NTVEVELPVYKAIG F
Sbjct: 605 AGNEKDDDEADTVGCCTLKVANVECIPPNKLKFDFLGKDSIRYENTVEVELPVYKAIGHF 664
Query: 1007 KSGKSEGDDLFDKLDTSKLNAHLKELMPGLTAKVFRTYNASITLDEMLNRETKDGEVAEK 828
+ K + DDLFD LDTSKLNAHLKELMPGLTAKVFRTYNASITLDE L ET+DG+VAEK
Sbjct: 665 QVAKKQTDDLFDSLDTSKLNAHLKELMPGLTAKVFRTYNASITLDEKLYEETEDGDVAEK 724
Query: 827 IVIYQHANKEVAIICNHQRSVSKSHSAQMSRLSEKMDELKAVLDELKTDLVRAKKGKPPL 648
IVIY ANK+VAIICNHQR++SKSH AQMSRL+EK++ELK+ L ELKTDL RAKKGKPPL
Sbjct: 725 IVIYNQANKQVAIICNHQRTISKSHDAQMSRLTEKIEELKSTLKELKTDLDRAKKGKPPL 784
Query: 647 NDADGKPKKNLTPEALEKKIAQTNAKIEKMERDMKTKEDLKTVALGTSKINYLDPRISVA 468
ADGK K++LTPEA+EKKIA TN KIEKME MKTKEDLKTVALGTSKINYLDPRI+VA
Sbjct: 785 KGADGKQKRSLTPEAIEKKIATTNQKIEKMEMAMKTKEDLKTVALGTSKINYLDPRITVA 844
Query: 467 WCKRHEVPIEKIFNKSLLAKFAWSMDVDPTFRF 369
WCKRHEVPI+KIFNKSLLAKF W+MDVDP FRF
Sbjct: 845 WCKRHEVPIDKIFNKSLLAKFTWAMDVDPQFRF 877
>ref|XP_002265386.1| PREDICTED: DNA topoisomerase 1-like [Vitis vinifera]
Length = 883
Score = 1001 bits (2589), Expect = 0.0
Identities = 484/552 (87%), Positives = 513/552 (92%)
Frame = -2
Query: 2024 PPSFGEGKKWSTLEHNGVIFPPPYKSHGVKMLYNGQPVDLTPEQEEVATMFAVMKDTEYA 1845
PP+ GEG+KW+TLEHNGVIFPPPYK HGVKMLYNG+PVDLTPEQEEVATMFAVMKDT+YA
Sbjct: 332 PPNSGEGQKWTTLEHNGVIFPPPYKPHGVKMLYNGRPVDLTPEQEEVATMFAVMKDTDYA 391
Query: 1844 TKPRFIENFMNDWRLILGKNHIIKKFELCNFTPIYEWHQSEKEKKKQMSTXXXXXXXXXX 1665
TKPRFIENFMNDWR+ LGKNH+IKKFELC+FTPIYEWH+ EKEKKKQM+T
Sbjct: 392 TKPRFIENFMNDWRVRLGKNHVIKKFELCDFTPIYEWHEKEKEKKKQMTTEEKKALKEEK 451
Query: 1664 XXXXXKYMWAIVDGVKEKVGNFRVEPPGLFRGRGEHPKMGKLKRRIRPSDITINIGKDAP 1485
KYMWA+VDGVKEKVGNFRVEPPGLFRGRGEHPKMGKLK+RI PSDITINIGK+AP
Sbjct: 452 LKQEDKYMWAVVDGVKEKVGNFRVEPPGLFRGRGEHPKMGKLKKRICPSDITINIGKEAP 511
Query: 1484 IPECPIPGQRWKEVKHDNTVTWLAFWNDPINPKEFKYVFLAASSSLKGQSDKEKYEKARV 1305
+PECPIPG+RWKEV+HDNTVTWLAFWNDPINPKEFKYVFLAASSSLKGQSDKEKYEKAR+
Sbjct: 512 VPECPIPGERWKEVRHDNTVTWLAFWNDPINPKEFKYVFLAASSSLKGQSDKEKYEKARL 571
Query: 1304 LKDYIHDIRATYTKDFASKDITKRQIAVATYLIDKLALRAGNEKDDDEADTVGCCTLKVE 1125
LKDYI +IRATYTKDF +KD KRQIAVATYLIDKLALRAGNEKDDDEADTVGCCTLKVE
Sbjct: 572 LKDYIQNIRATYTKDFTNKDTMKRQIAVATYLIDKLALRAGNEKDDDEADTVGCCTLKVE 631
Query: 1124 NVELVPPNKLQFDFLGKDSIRYFNTVEVELPVYKAIGQFKSGKSEGDDLFDKLDTSKLNA 945
NV LVPPNKL+FDFLGKDSIRYFNTVEVELPVYKAIGQFK+GKS GDDLFDKLDTSKLNA
Sbjct: 632 NVALVPPNKLEFDFLGKDSIRYFNTVEVELPVYKAIGQFKTGKSGGDDLFDKLDTSKLNA 691
Query: 944 HLKELMPGLTAKVFRTYNASITLDEMLNRETKDGEVAEKIVIYQHANKEVAIICNHQRSV 765
HLKELMPGLTAKVFRTYNASITLDEMLNRE + G+ EKIVIYQHANKEVAIICNHQRSV
Sbjct: 692 HLKELMPGLTAKVFRTYNASITLDEMLNREARGGDAMEKIVIYQHANKEVAIICNHQRSV 751
Query: 764 SKSHSAQMSRLSEKMDELKAVLDELKTDLVRAKKGKPPLNDADGKPKKNLTPEALEKKIA 585
SKSH QMSRLSEKM EL+ VLDELKTDL RAKKGKPPL D+DGKPKKN+TPE LE+KIA
Sbjct: 752 SKSHDVQMSRLSEKMRELQGVLDELKTDLARAKKGKPPLKDSDGKPKKNMTPEVLERKIA 811
Query: 584 QTNAKIEKMERDMKTKEDLKTVALGTSKINYLDPRISVAWCKRHEVPIEKIFNKSLLAKF 405
QTN KIEKMERDMKTKEDLKTVALGTSKINYLDPRISVAWCKR EVPIEKIFNKSLLAKF
Sbjct: 812 QTNTKIEKMERDMKTKEDLKTVALGTSKINYLDPRISVAWCKRQEVPIEKIFNKSLLAKF 871
Query: 404 AWSMDVDPTFRF 369
AW+MDVDP+FRF
Sbjct: 872 AWAMDVDPSFRF 883
Score = 90.5 bits (223), Expect = 4e-15
Identities = 49/99 (49%), Positives = 63/99 (63%)
Frame = -2
Query: 2507 IPFSLRFKFKSGAGSSSEKFYDSNEEKPFASKIQQNGSIKGGNELVKSPKVLNKRTLSDA 2328
IP S +F+ K+G G+S +K + +E+KP S ++ NG K +E VKSPK NKR L A
Sbjct: 174 IPLSSKFRLKTGMGASLDKLDNFDEKKPLTSTLKPNGISKKDDERVKSPKGQNKRPLGQA 233
Query: 2327 NPSAQCPIKKQKLSDISVHGKIGQAHVKAEQKIEDDDDD 2211
N S KK KL D SV GK+ Q VKAEQK +DDDD+
Sbjct: 234 NTSHHSSSKKPKLLDGSVKGKVKQVSVKAEQKDDDDDDN 272
>ref|XP_006474977.1| PREDICTED: DNA topoisomerase 1-like isoform X1 [Citrus sinensis]
gi|568842074|ref|XP_006474978.1| PREDICTED: DNA
topoisomerase 1-like isoform X2 [Citrus sinensis]
gi|568842076|ref|XP_006474979.1| PREDICTED: DNA
topoisomerase 1-like isoform X3 [Citrus sinensis]
gi|568842078|ref|XP_006474980.1| PREDICTED: DNA
topoisomerase 1-like isoform X4 [Citrus sinensis]
Length = 902
Score = 999 bits (2582), Expect = 0.0
Identities = 545/899 (60%), Positives = 620/899 (68%), Gaps = 36/899 (4%)
Frame = -2
Query: 2957 PIVFKRSNITSKQKQLNLEIKKPSFQRHDG------------SSGKHVADSFSPKNQKSS 2814
P VFKR+ S+Q N E+K+PS +G SS K + P +QK++
Sbjct: 22 PAVFKRNTAASRQNLANPEVKRPSSSTANGQNSNAPKDKTTVSSSKVLPVKSPPPSQKAT 81
Query: 2813 LEKGKXXXXXXXXXXXXXXXXXXXXXXXADKSKHSS-----------EKKLAINDREKKP 2667
K SK SS LA+ +E+
Sbjct: 82 TSSAKASPSKSPMRSPVKSPVRSPVKSPVANSKESSPLDDRLKQSPQHNALAVVKKEEIK 141
Query: 2666 LNKSPIEPNADSDDDKPLSARIFAASTSLPRNNSTHVSEGL------------SVXXXXX 2523
+ DS+DDKPLSAR+ + NS +V++G+ +V
Sbjct: 142 DGNGLKSDDNDSEDDKPLSARL--------KGNSKNVNQGIGASKADAAISEVNVKTDPE 193
Query: 2522 XXXXEIPFSLRFKFKSGAGSSSEKFYDSNEEKPFASKIQQNGSIKGGNELVKSPKVLNKR 2343
E+P S RF KS AG+S K DS+E+KP ASK+QQNGS + KS V KR
Sbjct: 194 DSDDEVPLSSRFP-KSNAGTSGAKPIDSDEKKPLASKVQQNGSTSRETQ-QKSSSVPVKR 251
Query: 2342 TLSDANPSAQCPIKKQKLSDISVHGKIGQAHVKAEQKIEDDDDDVPLSQRMXXXXXXXXX 2163
L A+ S KK K+SD S K+ Q VK E+K DDDD +P+SQRM
Sbjct: 252 PLQKASSSGASSAKKPKVSDTSKEVKVKQVTVKVEKK-ADDDDHIPISQRM-------KN 303
Query: 2162 XXXXXXXKVFFDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVPPSFGEGKKWSTLE 1983
V +P S KKW+TL
Sbjct: 304 SAPSVKKSVTNTAKATKSVSSSSNKINKKTKKVIKNSQYSKSTKMLPGSGDGQKKWTTLV 363
Query: 1982 HNGVIFPPPYKSHGVKMLYNGQPVDLTPEQEEVATMFAVMKDTEYATKPRFIENFMNDWR 1803
HNGVIFPPPY HGVKMLY G+ V+LTPEQEEVATMFAVM DT+Y KP+F ENF NDWR
Sbjct: 364 HNGVIFPPPYLPHGVKMLYKGKEVNLTPEQEEVATMFAVMLDTDYMQKPKFRENFWNDWR 423
Query: 1802 LILGKNHIIKKFELCNFTPIYEWHQSEKEKKKQMSTXXXXXXXXXXXXXXXKYMWAIVDG 1623
+LGKNH+I+ E C+F PIY+WHQ +KEKKKQMS+ KYMWAIVDG
Sbjct: 424 KLLGKNHVIQNLEGCDFKPIYDWHQEQKEKKKQMSSEEKKALKEEKLKQEEKYMWAIVDG 483
Query: 1622 VKEKVGNFRVEPPGLFRGRGEHPKMGKLKRRIRPSDITINIGKDAPIPECPIPGQRWKEV 1443
VKEKVGNFRVEPPGLFRGRGEHPKMGKLK+RI+PSDITINIGKD PIPECPIPG+ WKEV
Sbjct: 484 VKEKVGNFRVEPPGLFRGRGEHPKMGKLKKRIQPSDITINIGKDVPIPECPIPGESWKEV 543
Query: 1442 KHDNTVTWLAFWNDPINPKEFKYVFLAASSSLKGQSDKEKYEKARVLKDYIHDIRATYTK 1263
KHDNTVTWLAFWNDPINPKEFKYVFLAASSSLKGQSDKEKYEKAR LKDYIH IRA YTK
Sbjct: 544 KHDNTVTWLAFWNDPINPKEFKYVFLAASSSLKGQSDKEKYEKARKLKDYIHSIRAAYTK 603
Query: 1262 DFASKDITKRQIAVATYLIDKLALRAGNEKDDDEADTVGCCTLKVENVELVPPNKLQFDF 1083
DF S+D T+RQIAVATYLIDKLALRAGNEKDDDEADTVGCCTLKV NVE +PPNKL+FDF
Sbjct: 604 DFVSRDGTRRQIAVATYLIDKLALRAGNEKDDDEADTVGCCTLKVGNVECIPPNKLKFDF 663
Query: 1082 LGKDSIRYFNTVEVELPVYKAIGQFKSGKSEGDDLFDKLDTSKLNAHLKELMPGLTAKVF 903
LGKDSI+Y NTVEVELPVYKAIGQF++GK + DDLFDKLDT+KLNAHLKELMPGLTAKVF
Sbjct: 664 LGKDSIQYVNTVEVELPVYKAIGQFQTGKKQNDDLFDKLDTAKLNAHLKELMPGLTAKVF 723
Query: 902 RTYNASITLDEMLNRETKDGEVAEKIVIYQHANKEVAIICNHQRSVSKSHSAQMSRLSEK 723
RTYNASITLD MLN+ T DG+VA KI +YQ ANKEVAIICNHQR+VSK+HSAQMSRL+EK
Sbjct: 724 RTYNASITLDGMLNKGTGDGDVAVKIDVYQRANKEVAIICNHQRTVSKTHSAQMSRLTEK 783
Query: 722 MDELKAVLDELKTDLVRAKKGKPPL-NDADGKPKKNLTPEALEKKIAQTNAKIEKMERDM 546
+++LK VL +L+ DL RAKKGKPPL D+DGK K+NL PEALE+K+AQTNAKIEKMERDM
Sbjct: 784 IEDLKGVLKDLRVDLDRAKKGKPPLMKDSDGKRKRNLAPEALERKMAQTNAKIEKMERDM 843
Query: 545 KTKEDLKTVALGTSKINYLDPRISVAWCKRHEVPIEKIFNKSLLAKFAWSMDVDPTFRF 369
KTKEDLKTVALGTSKINYLDPRI+VAWCKRHEVPIEKIFNKSLLAKFAW+MDVDP FRF
Sbjct: 844 KTKEDLKTVALGTSKINYLDPRITVAWCKRHEVPIEKIFNKSLLAKFAWAMDVDPEFRF 902
>ref|XP_006452479.1| hypothetical protein CICLE_v10007398mg [Citrus clementina]
gi|567920950|ref|XP_006452481.1| hypothetical protein
CICLE_v10007398mg [Citrus clementina]
gi|557555705|gb|ESR65719.1| hypothetical protein
CICLE_v10007398mg [Citrus clementina]
gi|557555707|gb|ESR65721.1| hypothetical protein
CICLE_v10007398mg [Citrus clementina]
Length = 902
Score = 996 bits (2576), Expect = 0.0
Identities = 543/899 (60%), Positives = 620/899 (68%), Gaps = 36/899 (4%)
Frame = -2
Query: 2957 PIVFKRSNITSKQKQLNLEIKKPSFQRHDG------------SSGKHVADSFSPKNQKSS 2814
P VFKR+ S+Q N E+K+PS +G SS K + P +QK++
Sbjct: 22 PAVFKRNTAASRQNLANPEVKRPSSSTANGQNSNAPKDKTTVSSSKVLPVKSPPPSQKAT 81
Query: 2813 LEKGKXXXXXXXXXXXXXXXXXXXXXXXADKSKHSS-----------EKKLAINDREKKP 2667
K SK SS LA+ +E+
Sbjct: 82 TSSAKASPLKSPMRSPVKSPVRSPVKSPVANSKESSPLDDRLKQLPQHNALAVVKKEEIK 141
Query: 2666 LNKSPIEPNADSDDDKPLSARIFAASTSLPRNNSTHVSEGL------------SVXXXXX 2523
+ DS+DDKPLSAR+ + N+ +V++G+ +V
Sbjct: 142 DGNGLKSDDNDSEDDKPLSARL--------KGNTKNVNQGIGASKADAAISEVNVKTDPE 193
Query: 2522 XXXXEIPFSLRFKFKSGAGSSSEKFYDSNEEKPFASKIQQNGSIKGGNELVKSPKVLNKR 2343
E+P S RF KS AG+S K DS+E+KP ASK+QQNGS + KS V KR
Sbjct: 194 DSDDEVPLSSRFP-KSNAGTSGAKPIDSDEKKPLASKVQQNGSTSRETQ-QKSSSVPVKR 251
Query: 2342 TLSDANPSAQCPIKKQKLSDISVHGKIGQAHVKAEQKIEDDDDDVPLSQRMXXXXXXXXX 2163
L A+ S KK K+SD S K+ Q VK E+K DDDD +P+SQRM
Sbjct: 252 PLQKASSSGASSAKKPKVSDTSKEVKVKQVTVKVEKK-ADDDDHIPISQRM-------KN 303
Query: 2162 XXXXXXXKVFFDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVPPSFGEGKKWSTLE 1983
V +P S KKW+TL
Sbjct: 304 SAPSVKKSVTNTAKATKSVSSSSKKINKKTKKVIKNSQYSKSTKMLPGSGDGQKKWTTLV 363
Query: 1982 HNGVIFPPPYKSHGVKMLYNGQPVDLTPEQEEVATMFAVMKDTEYATKPRFIENFMNDWR 1803
HNGVIFPPPY HGVKMLY G+ V+LTPEQEEVATMFAVM DT+Y KP+F ENF NDWR
Sbjct: 364 HNGVIFPPPYLPHGVKMLYKGKEVNLTPEQEEVATMFAVMLDTDYMQKPKFRENFWNDWR 423
Query: 1802 LILGKNHIIKKFELCNFTPIYEWHQSEKEKKKQMSTXXXXXXXXXXXXXXXKYMWAIVDG 1623
+LGKNH+I+ E C+F PIY+WHQ +KEKKKQMS+ KYMWAIVDG
Sbjct: 424 KLLGKNHVIQNLEGCDFKPIYDWHQEQKEKKKQMSSEEKKALKEEKLKQEEKYMWAIVDG 483
Query: 1622 VKEKVGNFRVEPPGLFRGRGEHPKMGKLKRRIRPSDITINIGKDAPIPECPIPGQRWKEV 1443
VKEKVGNFRVEPPGLFRGRGEHPKMGKLK+RI+PSDITINIGKD PIPECPIPG+ WKEV
Sbjct: 484 VKEKVGNFRVEPPGLFRGRGEHPKMGKLKKRIQPSDITINIGKDVPIPECPIPGESWKEV 543
Query: 1442 KHDNTVTWLAFWNDPINPKEFKYVFLAASSSLKGQSDKEKYEKARVLKDYIHDIRATYTK 1263
KHDNTVTWLAFWNDPINPKEFKYVFLAASSSLKGQSD+EKYEKAR LKDYIH IRA YTK
Sbjct: 544 KHDNTVTWLAFWNDPINPKEFKYVFLAASSSLKGQSDREKYEKARKLKDYIHSIRAAYTK 603
Query: 1262 DFASKDITKRQIAVATYLIDKLALRAGNEKDDDEADTVGCCTLKVENVELVPPNKLQFDF 1083
DF S+D T+RQIAVATYLIDKLALRAGNEKDDDEADTVGCCTLKV NVE +PPNKL+FDF
Sbjct: 604 DFVSRDGTRRQIAVATYLIDKLALRAGNEKDDDEADTVGCCTLKVGNVECIPPNKLKFDF 663
Query: 1082 LGKDSIRYFNTVEVELPVYKAIGQFKSGKSEGDDLFDKLDTSKLNAHLKELMPGLTAKVF 903
LGKDSI+Y NTVEVELPVYKAIGQF++GK + DDLFDKLDT+KLNAHLKELMPGLTAKVF
Sbjct: 664 LGKDSIQYVNTVEVELPVYKAIGQFQTGKKQNDDLFDKLDTAKLNAHLKELMPGLTAKVF 723
Query: 902 RTYNASITLDEMLNRETKDGEVAEKIVIYQHANKEVAIICNHQRSVSKSHSAQMSRLSEK 723
RTYNASITLD MLN+ T DG+VA KI +YQ ANKEVAIICNHQR+VSK+HSAQMSRL+EK
Sbjct: 724 RTYNASITLDGMLNKGTGDGDVAVKIDVYQRANKEVAIICNHQRTVSKTHSAQMSRLTEK 783
Query: 722 MDELKAVLDELKTDLVRAKKGKPPL-NDADGKPKKNLTPEALEKKIAQTNAKIEKMERDM 546
+++LK VL +L+ DL RAKKGKPPL D+DGK K+NL PEALE+K+AQTNAKIEKMERDM
Sbjct: 784 IEDLKGVLKDLRVDLDRAKKGKPPLMKDSDGKRKRNLAPEALERKMAQTNAKIEKMERDM 843
Query: 545 KTKEDLKTVALGTSKINYLDPRISVAWCKRHEVPIEKIFNKSLLAKFAWSMDVDPTFRF 369
KTKEDLKTVALGTSKINYLDPRI+VAWCKRHEVPIEKIFNKSLLAKFAW+MDVDP FRF
Sbjct: 844 KTKEDLKTVALGTSKINYLDPRITVAWCKRHEVPIEKIFNKSLLAKFAWAMDVDPEFRF 902
>ref|XP_002266885.1| PREDICTED: DNA topoisomerase 1 [Vitis vinifera]
gi|296082698|emb|CBI21703.3| unnamed protein product
[Vitis vinifera]
Length = 857
Score = 989 bits (2556), Expect = 0.0
Identities = 527/772 (68%), Positives = 584/772 (75%), Gaps = 12/772 (1%)
Frame = -2
Query: 2648 EPNADSDDDKPLSARIFAASTSLPRNNSTHVSEGLS-------VXXXXXXXXXEIPFSLR 2490
E ++DS+DDKPLS R+ S+ LP+ + + GL +IP S +
Sbjct: 110 ELDSDSEDDKPLSVRL---SSGLPKGKGSSNNVGLGRGGVGGVKKEEDDDDDDKIPLSSK 166
Query: 2489 FKFKSGAGSSSEKFYDSNEEKPFASKIQQNGSIKGGNELVKSPKVLNK-RTLSDANPSA- 2316
F+ KS +E+KP K+ QNG G ++ KSP VLNK R L N S
Sbjct: 167 FQLKS------------DEKKPLPLKVNQNG---GTDKRDKSPTVLNKKRPLDGVNSSLG 211
Query: 2315 -QCPIKKQKLSDISVHG-KIGQAHVKAEQKIEDDDDD-VPLSQRMXXXXXXXXXXXXXXX 2145
+KK K+S S K+ A KAE K+EDDDDD +P+SQRM
Sbjct: 212 QSSLVKKPKISGQSAQPFKVTHATAKAEPKVEDDDDDDMPISQRMKKSGASSGNKPVPAK 271
Query: 2144 XKVFFDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVPPSFGEGKKWSTLEHNGVIF 1965
KV VPPS GEG+KW+TL HNGVIF
Sbjct: 272 QKV-----TKVVSSTSFKKTKDIKSKKMEKNSKYSKSTKVPPSSGEGQKWTTLVHNGVIF 326
Query: 1964 PPPYKSHGVKMLYNGQPVDLTPEQEEVATMFAVMKDTEYATKPRFIENFMNDWRLILGKN 1785
PPPYK HGVKMLY G+PVDLTPEQEEVATMFAVM DT+Y K +F ENFM DWR ILGKN
Sbjct: 327 PPPYKPHGVKMLYKGKPVDLTPEQEEVATMFAVMLDTDYMQKEKFKENFMADWRKILGKN 386
Query: 1784 HIIKKFELCNFTPIYEWHQSEKEKKKQMSTXXXXXXXXXXXXXXXKYMWAIVDGVKEKVG 1605
H+I++ + C+FTPIYEWHQ EKEKKKQMST KYMWAIVDGVKEKVG
Sbjct: 387 HVIQRLDDCDFTPIYEWHQEEKEKKKQMSTEEKKTLKEEKLKLEEKYMWAIVDGVKEKVG 446
Query: 1604 NFRVEPPGLFRGRGEHPKMGKLKRRIRPSDITINIGKDAPIPECPIPGQRWKEVKHDNTV 1425
NFRVEPPGLFRGRGEHPKMGKLKRRI PSDITINIGK++ IPECPIPG+ WKEVKHDNTV
Sbjct: 447 NFRVEPPGLFRGRGEHPKMGKLKRRIHPSDITINIGKNSQIPECPIPGESWKEVKHDNTV 506
Query: 1424 TWLAFWNDPINPKEFKYVFLAASSSLKGQSDKEKYEKARVLKDYIHDIRATYTKDFASKD 1245
TWLAFWNDPINPKEFKYVFLAASSSLKGQSDKEKYEKAR LK+YI DIRATYTKDF SKD
Sbjct: 507 TWLAFWNDPINPKEFKYVFLAASSSLKGQSDKEKYEKARKLKNYIKDIRATYTKDFVSKD 566
Query: 1244 ITKRQIAVATYLIDKLALRAGNEKDDDEADTVGCCTLKVENVELVPPNKLQFDFLGKDSI 1065
ITKRQIAVATYLIDKLALRAGNEKDDDEADTVGCCTLKVENV PPN LQFDFLGKDSI
Sbjct: 567 ITKRQIAVATYLIDKLALRAGNEKDDDEADTVGCCTLKVENVIPEPPNSLQFDFLGKDSI 626
Query: 1064 RYFNTVEVELPVYKAIGQFKSGKSEGDDLFDKLDTSKLNAHLKELMPGLTAKVFRTYNAS 885
RY TVEVELPVYKAI QF+ GKS DDLFDKLDTSKLNAHLKELMPGLTAKVFRTYNAS
Sbjct: 627 RYEKTVEVELPVYKAIEQFRVGKSGSDDLFDKLDTSKLNAHLKELMPGLTAKVFRTYNAS 686
Query: 884 ITLDEMLNRETKDGEVAEKIVIYQHANKEVAIICNHQRSVSKSHSAQMSRLSEKMDELKA 705
ITLDEMLN++TK+G+VA+K+V+YQHANKEVAIICNHQR++SKSH+AQM+RL+EK+DE+K
Sbjct: 687 ITLDEMLNKDTKEGDVAQKVVVYQHANKEVAIICNHQRTISKSHTAQMTRLTEKIDEMKG 746
Query: 704 VLDELKTDLVRAKKGKPPLNDADGKPKKNLTPEALEKKIAQTNAKIEKMERDMKTKEDLK 525
VL+ LKTDL RAKKGKPPL DADGK ++NLTPEALE+KIAQTNAKIEKMERD TKEDLK
Sbjct: 747 VLNGLKTDLARAKKGKPPLKDADGK-RRNLTPEALERKIAQTNAKIEKMERDKDTKEDLK 805
Query: 524 TVALGTSKINYLDPRISVAWCKRHEVPIEKIFNKSLLAKFAWSMDVDPTFRF 369
TVALGTSKINYLDPRISVAWCKR EVPIEK+FNKSLLAKFAW+MDV P FRF
Sbjct: 806 TVALGTSKINYLDPRISVAWCKRQEVPIEKVFNKSLLAKFAWAMDVPPDFRF 857
>ref|XP_002529020.1| DNA topoisomerase type I, putative [Ricinus communis]
gi|223531500|gb|EEF33331.1| DNA topoisomerase type I,
putative [Ricinus communis]
Length = 891
Score = 986 bits (2549), Expect = 0.0
Identities = 537/887 (60%), Positives = 613/887 (69%), Gaps = 24/887 (2%)
Frame = -2
Query: 2957 PIVFKR-SNITSKQKQLNLEIKKP--SFQRHDGSS-----GKHVADSFSPKNQKSSLEKG 2802
P+VFKR +N T+KQ Q N E+KKP S Q +G S GK S KS +
Sbjct: 24 PLVFKRGNNSTTKQNQSNPEVKKPLLSSQNSNGQSSNAQKGKSTVPSLKASPVKSPIGSP 83
Query: 2801 KXXXXXXXXXXXXXXXXXXXXXXXADKSKHSSEKKLAIN-----DREKKPLNKSPIE--- 2646
K D+ + K+ A N K + ++
Sbjct: 84 KASTSSAKASPLRSPVANSKGSSSLDEQLKQASKQNASNVVKDVSSAKPEIGLKSVKHET 143
Query: 2645 ----PNADSDDDKPLSARIFAASTSLPRNNSTHVSEGLSVXXXXXXXXXE---IPFSLRF 2487
+ DS+DD PLSAR + N+ +VS+ ++ + +P RF
Sbjct: 144 KSNGDDEDSEDDLPLSAR--------RKGNTNNVSKVVTAPKRVKDEDSDDDKVPLCSRF 195
Query: 2486 KFKSGAGSSSEKFYDSNEEKPFASKIQQNGSIKGGNELVKSPKVLNKRTLSDANPSAQCP 2307
KS AG+S K + +E+KP SK+QQNGS + K+P + KR L AN S Q
Sbjct: 196 PMKSTAGTSGNKPNNISEKKPLPSKVQQNGSTSKDKQQ-KAPLIPTKRPLDKANSSEQSS 254
Query: 2306 IKKQKLSDISVHGKIGQAHVKAEQKIEDDDDDVPLSQRMXXXXXXXXXXXXXXXXKVFFD 2127
IKK KLS S K+ QA VKAE EDD DD+P++QR +
Sbjct: 255 IKKPKLSAGSTITKVKQATVKAE---EDDPDDIPIAQRKKSLGSSESKLSSAKQKAI--- 308
Query: 2126 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVPPSFGEGKKWSTLEHNGVIFPPPYKS 1947
P S KKW+TL HNGVIFPPPYK
Sbjct: 309 ----KVVSSSFKKPIKKNKKQMKNTKYSKSTKVQPSSTDGQKKWTTLIHNGVIFPPPYKP 364
Query: 1946 HGVKMLYNGQPVDLTPEQEEVATMFAVMKDTEYATKPRFIENFMNDWRLILGKNHIIKKF 1767
HG+K+LY G+PVDL PEQEEVATMFAVMKDT+Y KP+F+ENF NDWR +LG+NH+I+K
Sbjct: 365 HGIKILYKGRPVDLAPEQEEVATMFAVMKDTDYMQKPKFLENFWNDWRKLLGRNHVIQKL 424
Query: 1766 ELCNFTPIYEWHQSEKEKKKQMSTXXXXXXXXXXXXXXXKYMWAIVDGVKEKVGNFRVEP 1587
E C+FTPIYEWH+ EKEKKKQMST KYMWAIVDGVKEKVGNFRVEP
Sbjct: 425 EDCDFTPIYEWHEREKEKKKQMSTEEKKAQKEEKLRQEEKYMWAIVDGVKEKVGNFRVEP 484
Query: 1586 PGLFRGRGEHPKMGKLKRRIRPSDITINIGKDAPIPECPIPGQRWKEVKHDNTVTWLAFW 1407
P LFRGRGEHPKMGKLK+RI+PSDITINIGKDAPIPECPIPG+ WKEVKHDNTVTWLAFW
Sbjct: 485 PALFRGRGEHPKMGKLKKRIQPSDITINIGKDAPIPECPIPGESWKEVKHDNTVTWLAFW 544
Query: 1406 NDPINPKEFKYVFLAASSSLKGQSDKEKYEKARVLKDYIHDIRATYTKDFASKDITKRQI 1227
NDPINPKEFKYVFLAASSSLKGQSDKEKYEKAR LKDYIH+IRA Y KD SKDITK+QI
Sbjct: 545 NDPINPKEFKYVFLAASSSLKGQSDKEKYEKARKLKDYIHNIRAAYQKDLRSKDITKKQI 604
Query: 1226 AVATYLIDKLALRAGNEKDDDEADTVGCCTLKVENVELVPPN-KLQFDFLGKDSIRYFNT 1050
AVATYLIDKLALRAGNEKDDDEADTVGCCTLKV NVE +P + L+FDFLGKDSIRY NT
Sbjct: 605 AVATYLIDKLALRAGNEKDDDEADTVGCCTLKVANVECIPGSFNLKFDFLGKDSIRYENT 664
Query: 1049 VEVELPVYKAIGQFKSGKSEGDDLFDKLDTSKLNAHLKELMPGLTAKVFRTYNASITLDE 870
VEV+ VY+AIG F+ GK + DDLFDKLDT+KLNAHLKELMPGLTAKVFRTYNASITLDE
Sbjct: 665 VEVKPEVYEAIGTFQKGKKQTDDLFDKLDTTKLNAHLKELMPGLTAKVFRTYNASITLDE 724
Query: 869 MLNRETKDGEVAEKIVIYQHANKEVAIICNHQRSVSKSHSAQMSRLSEKMDELKAVLDEL 690
L ET+DG+VAEK+VIYQ ANKEVAIICNHQR++SKSH AQMS+L EK++ELKA L EL
Sbjct: 725 KLYEETEDGDVAEKVVIYQRANKEVAIICNHQRTISKSHGAQMSKLIEKIEELKATLKEL 784
Query: 689 KTDLVRAKKGKPPLNDADGKPKKNLTPEALEKKIAQTNAKIEKMERDMKTKEDLKTVALG 510
KTDL RAKKGKPPL DADGK K+NL+PE +EKKIA TN +IEKME +MKTKEDLKTVALG
Sbjct: 785 KTDLDRAKKGKPPLKDADGKQKRNLSPENIEKKIASTNQRIEKMELNMKTKEDLKTVALG 844
Query: 509 TSKINYLDPRISVAWCKRHEVPIEKIFNKSLLAKFAWSMDVDPTFRF 369
TSKINYLDPRI+VAWCKRHEVPIEKIFNKSLLAKF W+MDVDP FRF
Sbjct: 845 TSKINYLDPRITVAWCKRHEVPIEKIFNKSLLAKFTWAMDVDPQFRF 891
>ref|XP_007131473.1| hypothetical protein PHAVU_011G016600g [Phaseolus vulgaris]
gi|593104562|ref|XP_007131474.1| hypothetical protein
PHAVU_011G016600g [Phaseolus vulgaris]
gi|561004473|gb|ESW03467.1| hypothetical protein
PHAVU_011G016600g [Phaseolus vulgaris]
gi|561004474|gb|ESW03468.1| hypothetical protein
PHAVU_011G016600g [Phaseolus vulgaris]
Length = 924
Score = 957 bits (2475), Expect = 0.0
Identities = 519/887 (58%), Positives = 610/887 (68%), Gaps = 24/887 (2%)
Frame = -2
Query: 2957 PIVFKRSNITSKQKQLNLEIKKPSFQRHDGSSGKHVADSFSPKNQKSSLEKG-------- 2802
PI++KR +++K+ Q E +K S H+G S + + ++ S Q SS++KG
Sbjct: 53 PIIYKR--LSAKKNQSLSEARKSSSHIHEGQSYRQIPNASSSNGQTSSMQKGNTAPSLKP 110
Query: 2801 ---KXXXXXXXXXXXXXXXXXXXXXXXADKSKHSSEKKLAINDREKKPLN-----KSPIE 2646
K KS ++K+ D + +P + K E
Sbjct: 111 SAMKPSVGISRAPNSVGNTSSVKFPVANSKSPSLADKQKMFIDVKVEPKSTVHSGKDFCE 170
Query: 2645 PNADSDDDKPLSARIFAASTSLPRNNSTHVSEGLSVXXXXXXXXXE---IPFSLRFKFKS 2475
+ D +D+KPLS R+ NS H ++ SV +P S +
Sbjct: 171 DSEDDEDNKPLSFRL---------KNSNHDNKVTSVVKKSYEDSDGDDDVPLSKKLPRNF 221
Query: 2474 GAGSSSEKFYDSNEEKPFASKIQ---QNGSIKGGNELVKSPKVLNKRTLSDANPSAQCPI 2304
G+SS +D +++KP SKIQ QNGS G + P +L + D + S +
Sbjct: 222 NLGTSSSN-HDDSDKKPI-SKIQKERQNGS--GMSNKQDRPSLLPAKRPLDNSNSLHPSV 277
Query: 2303 KKQKLSDISVHGKIGQAHVKAEQKIE--DDDDDVPLSQRMXXXXXXXXXXXXXXXXKVFF 2130
KK K+S K K E K+E DDDDD+P+SQR+
Sbjct: 278 KKPKVSGSDASIKTKPGFQKRELKLEDDDDDDDIPISQRIKKQTVSGDKSSSMKKVITKV 337
Query: 2129 DXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVPPSFGEGKKWSTLEHNGVIFPPPYK 1950
+P S KKW+TL HNGVIFPPPY+
Sbjct: 338 AKVNKSSSKSFKKQTKKPVKKSGSGSEYSKSSKLLPSSGDGQKKWTTLVHNGVIFPPPYQ 397
Query: 1949 SHGVKMLYNGQPVDLTPEQEEVATMFAVMKDTEYATKPRFIENFMNDWRLILGKNHIIKK 1770
HGVKMLY G+PVDLTPEQEEVATM+AVM+DTEY K +F +NF +DWR +LG+NH+I+
Sbjct: 398 RHGVKMLYKGRPVDLTPEQEEVATMYAVMRDTEYMQKDKFKDNFWSDWRKLLGRNHVIQN 457
Query: 1769 FELCNFTPIYEWHQSEKEKKKQMSTXXXXXXXXXXXXXXXKYMWAIVDGVKEKVGNFRVE 1590
+ C+FTPIY+W+QSEKEKKKQM+T KYMWAIVDGVKEKVGNFRVE
Sbjct: 458 LKDCDFTPIYDWYQSEKEKKKQMTTDEKKTVKEEKMKQEEKYMWAIVDGVKEKVGNFRVE 517
Query: 1589 PPGLFRGRGEHPKMGKLKRRIRPSDITINIGKDAPIPECPIPGQRWKEVKHDNTVTWLAF 1410
PPGLFRGRGEHPKMGKLK+RI P DITINIGKDAPIPECPIPG+RWKE++HDNTVTWLA+
Sbjct: 518 PPGLFRGRGEHPKMGKLKKRIHPGDITINIGKDAPIPECPIPGERWKEIRHDNTVTWLAY 577
Query: 1409 WNDPINPKEFKYVFLAASSSLKGQSDKEKYEKARVLKDYIHDIRATYTKDFASKDITKRQ 1230
W+DPINPK FKYVFLAASSSLKGQSDKEKYEKAR+LKDYI +IR+ YTKDF +KDITK Q
Sbjct: 578 WSDPINPKLFKYVFLAASSSLKGQSDKEKYEKARMLKDYIENIRSAYTKDFTNKDITKLQ 637
Query: 1229 IAVATYLIDKLALRAGNEKDDDEADTVGCCTLKVENVELVPPNKLQFDFLGKDSIRYFNT 1050
IAVATYLIDKLALRAGNEKDDDEADTVGCCTLKVENV PPNKL+F+FLGKDSI+Y NT
Sbjct: 638 IAVATYLIDKLALRAGNEKDDDEADTVGCCTLKVENVIREPPNKLKFNFLGKDSIKYENT 697
Query: 1049 VEVELPVYKAIGQFKSGKSEGDDLFDKLDTSKLNAHLKELMPGLTAKVFRTYNASITLDE 870
VEVELPVY AI + + K GDDLFDKLDTSKLNAHLKELMPGLTAKVFRT+NASITLD
Sbjct: 698 VEVELPVYNAILKLQKDKRPGDDLFDKLDTSKLNAHLKELMPGLTAKVFRTFNASITLDN 757
Query: 869 MLNRETKDGEVAEKIVIYQHANKEVAIICNHQRSVSKSHSAQMSRLSEKMDELKAVLDEL 690
MLN+ TKDG+V EKIV+YQHANK+VAIICNHQRSVSKSH AQMS+L+EK+DEL+AVL EL
Sbjct: 758 MLNKGTKDGDVGEKIVVYQHANKQVAIICNHQRSVSKSHDAQMSKLTEKIDELQAVLKEL 817
Query: 689 KTDLVRAKKGKPPLNDADGKPKKNLTPEALEKKIAQTNAKIEKMERDMKTKEDLKTVALG 510
KTDL RA+KGKPP +DGK KKNLTPE LEKKI+QTNAKIEKM+RDMKTKEDLKTVALG
Sbjct: 818 KTDLDRARKGKPPSKSSDGKTKKNLTPEVLEKKISQTNAKIEKMQRDMKTKEDLKTVALG 877
Query: 509 TSKINYLDPRISVAWCKRHEVPIEKIFNKSLLAKFAWSMDVDPTFRF 369
TSKINYLDPRI+VAWCKRHEVPIEKIFNKSLLAKF W+MDVDP FRF
Sbjct: 878 TSKINYLDPRITVAWCKRHEVPIEKIFNKSLLAKFCWAMDVDPDFRF 924
>ref|XP_007020664.1| DNA topoisomerase I alpha isoform 1 [Theobroma cacao]
gi|590606147|ref|XP_007020665.1| DNA topoisomerase I
alpha isoform 1 [Theobroma cacao]
gi|508720292|gb|EOY12189.1| DNA topoisomerase I alpha
isoform 1 [Theobroma cacao] gi|508720293|gb|EOY12190.1|
DNA topoisomerase I alpha isoform 1 [Theobroma cacao]
Length = 904
Score = 949 bits (2454), Expect = 0.0
Identities = 462/553 (83%), Positives = 501/553 (90%), Gaps = 1/553 (0%)
Frame = -2
Query: 2024 PPSFGEG-KKWSTLEHNGVIFPPPYKSHGVKMLYNGQPVDLTPEQEEVATMFAVMKDTEY 1848
PPS G+G KKWSTL HNGVIFP PY HGVKMLY+G+PVDLTPEQEEVATMFAVMKDT+Y
Sbjct: 352 PPSSGDGQKKWSTLVHNGVIFPSPYTPHGVKMLYDGRPVDLTPEQEEVATMFAVMKDTDY 411
Query: 1847 ATKPRFIENFMNDWRLILGKNHIIKKFELCNFTPIYEWHQSEKEKKKQMSTXXXXXXXXX 1668
+K +F +NF DW +LGKNH IK + C+FTPIYEWH EKEKKKQMS+
Sbjct: 412 MSKTQFKKNFWEDWSKLLGKNHTIKDLDRCDFTPIYEWHLQEKEKKKQMSSEEKKALKEE 471
Query: 1667 XXXXXXKYMWAIVDGVKEKVGNFRVEPPGLFRGRGEHPKMGKLKRRIRPSDITINIGKDA 1488
K+MWAIVDGVKEKVGNFRVEPPGLFRGRGEHPKMGKLKRRIRPSDITINIGKDA
Sbjct: 472 KLKQEEKFMWAIVDGVKEKVGNFRVEPPGLFRGRGEHPKMGKLKRRIRPSDITINIGKDA 531
Query: 1487 PIPECPIPGQRWKEVKHDNTVTWLAFWNDPINPKEFKYVFLAASSSLKGQSDKEKYEKAR 1308
PIPECPIPG+RWK++KHDNTVTWLAFWNDPINPKEFKYVFLAASSSLKGQSDKEKYEKAR
Sbjct: 532 PIPECPIPGERWKDIKHDNTVTWLAFWNDPINPKEFKYVFLAASSSLKGQSDKEKYEKAR 591
Query: 1307 VLKDYIHDIRATYTKDFASKDITKRQIAVATYLIDKLALRAGNEKDDDEADTVGCCTLKV 1128
+LKDYI +IRA YTKDF +KD+ KRQIAVATYLIDKLALRAGNEKDDDEADTVGCCTLKV
Sbjct: 592 MLKDYIKNIRAAYTKDFTTKDVMKRQIAVATYLIDKLALRAGNEKDDDEADTVGCCTLKV 651
Query: 1127 ENVELVPPNKLQFDFLGKDSIRYFNTVEVELPVYKAIGQFKSGKSEGDDLFDKLDTSKLN 948
NVE +PPNKL+FDFLGKDSI+Y NTVEVELPVYKAIGQF++GKS+ DDLFDKLDTSKLN
Sbjct: 652 GNVECIPPNKLKFDFLGKDSIQYVNTVEVELPVYKAIGQFQTGKSKSDDLFDKLDTSKLN 711
Query: 947 AHLKELMPGLTAKVFRTYNASITLDEMLNRETKDGEVAEKIVIYQHANKEVAIICNHQRS 768
AHLKELMPGLTAKVFRTYNASITLDEMLN+ETKDG+VAEK+V+YQ ANKEVAIICNHQRS
Sbjct: 712 AHLKELMPGLTAKVFRTYNASITLDEMLNKETKDGDVAEKVVVYQRANKEVAIICNHQRS 771
Query: 767 VSKSHSAQMSRLSEKMDELKAVLDELKTDLVRAKKGKPPLNDADGKPKKNLTPEALEKKI 588
+SKSHSAQMSRL+EK+ ELK VL ELK DL RAKKGKPPL DADGK K+NLTP+A++KKI
Sbjct: 772 ISKSHSAQMSRLTEKITELKGVLKELKIDLDRAKKGKPPLKDADGKQKRNLTPQAIQKKI 831
Query: 587 AQTNAKIEKMERDMKTKEDLKTVALGTSKINYLDPRISVAWCKRHEVPIEKIFNKSLLAK 408
QTNAKIEKMERDM+TKEDLKTVALGTSKINYLDPRI+VAWCKRHEVPIEKIFNKSLLAK
Sbjct: 832 DQTNAKIEKMERDMQTKEDLKTVALGTSKINYLDPRITVAWCKRHEVPIEKIFNKSLLAK 891
Query: 407 FAWSMDVDPTFRF 369
FAW+MDVDP FRF
Sbjct: 892 FAWAMDVDPDFRF 904
Score = 136 bits (343), Expect = 5e-29
Identities = 111/295 (37%), Positives = 140/295 (47%), Gaps = 39/295 (13%)
Frame = -2
Query: 2957 PIVFKRSNITS-KQKQLNLEIKKPSFQRHDGSSGKHVADSFSPKNQKSSLEKGKXXXXXX 2781
P+VFKR+N +S KQ QLN E+KK S QR DG SG+ V+D SP Q S+ K K
Sbjct: 21 PVVFKRNNTSSSKQNQLNSEVKKASSQRSDGQSGRQVSDVRSPNGQSSNAPKNKSISSSK 80
Query: 2780 XXXXXXXXXXXXXXXXXADKSKHSSEKKL-------------AINDREKKPLN------- 2661
K+ SS K L ++ND+ K+ L
Sbjct: 81 SPPVKSPILSP--------KASTSSTKALPVKSPVVNFKASTSLNDQSKQALKQNMTTAV 132
Query: 2660 ---KSPI----EPNADSDDDK---PLSARIFA--------ASTSLPRNNSTHVSEGLSVX 2535
+SPI EPN+D DDD PLSAR+ ASTS P + V + V
Sbjct: 133 KEGRSPIKGTTEPNSDDDDDDDSLPLSARLKGISNQGNKGASTSAPAQSRRLVPK-TEVK 191
Query: 2534 XXXXXXXXEIPFSLRFKFKSGAGSSSEKFYDSNEEKPFASKIQQNGSIKGGNELVKSPKV 2355
E P S RF KS G+SS + +D +E+KP ASKIQQNGSI G + S +
Sbjct: 192 VSAEDPDDEAPLSARFNVKSNTGTSSSRLHDCDEKKPLASKIQQNGSIMKGKQ-QNSSTL 250
Query: 2354 LNKRTLSDANPSAQCPIKKQKLSDISVHGKIGQAHVKAEQKIEDDDDDVPLSQRM 2190
KR L N S KK K SD K Q VKAE K ++DDD +P++QRM
Sbjct: 251 SGKRPLDKGNSSDHSSAKKPKTSDAPTTMKTKQVTVKAE-KADEDDDHMPIAQRM 304
>dbj|BAG31376.1| topoisomerase I [Camptotheca acuminata]
Length = 894
Score = 941 bits (2431), Expect = 0.0
Identities = 458/552 (82%), Positives = 496/552 (89%)
Frame = -2
Query: 2024 PPSFGEGKKWSTLEHNGVIFPPPYKSHGVKMLYNGQPVDLTPEQEEVATMFAVMKDTEYA 1845
PPS GEGKKW+TL HNGVIFPPPYK HGVKMLY G+PVDLTPEQEEVATMFAVM DT+Y
Sbjct: 343 PPSSGEGKKWNTLVHNGVIFPPPYKPHGVKMLYKGKPVDLTPEQEEVATMFAVMLDTDYM 402
Query: 1844 TKPRFIENFMNDWRLILGKNHIIKKFELCNFTPIYEWHQSEKEKKKQMSTXXXXXXXXXX 1665
TK +F ENFM+DWR ILGKNH+I+ E C+FTPIYEWHQ EKEKKK+M+
Sbjct: 403 TKSKFKENFMDDWRKILGKNHVIQNLEDCDFTPIYEWHQREKEKKKKMTAEEKKVLKEER 462
Query: 1664 XXXXXKYMWAIVDGVKEKVGNFRVEPPGLFRGRGEHPKMGKLKRRIRPSDITINIGKDAP 1485
KYMWAIV+GVKEKVGNFRVEPP LFRGRGEHPKMGKLK+ IRPSDITINIGKDAP
Sbjct: 463 LKQEEKYMWAIVNGVKEKVGNFRVEPPSLFRGRGEHPKMGKLKKCIRPSDITINIGKDAP 522
Query: 1484 IPECPIPGQRWKEVKHDNTVTWLAFWNDPINPKEFKYVFLAASSSLKGQSDKEKYEKARV 1305
IPECPIPG+ WKE++HDNTVTWLAFWNDPI P+EFKYVFLAASSSLKGQSDKEKYEKAR+
Sbjct: 523 IPECPIPGESWKEIRHDNTVTWLAFWNDPIKPREFKYVFLAASSSLKGQSDKEKYEKARL 582
Query: 1304 LKDYIHDIRATYTKDFASKDITKRQIAVATYLIDKLALRAGNEKDDDEADTVGCCTLKVE 1125
LKD+I IRA YTKDFASKDITKRQIAVATYLIDKLALRAGNEKDDDEADTVGCCTLKVE
Sbjct: 583 LKDFIQGIRAAYTKDFASKDITKRQIAVATYLIDKLALRAGNEKDDDEADTVGCCTLKVE 642
Query: 1124 NVELVPPNKLQFDFLGKDSIRYFNTVEVELPVYKAIGQFKSGKSEGDDLFDKLDTSKLNA 945
NVE PP+ L+FDFLGKDSIRY N VEVELPVYKAI QF++GK GDDLFDKLDTSKLNA
Sbjct: 643 NVEPKPPSILKFDFLGKDSIRYQNEVEVELPVYKAIQQFRTGKRGGDDLFDKLDTSKLNA 702
Query: 944 HLKELMPGLTAKVFRTYNASITLDEMLNRETKDGEVAEKIVIYQHANKEVAIICNHQRSV 765
HLK LMPGLTAKVFRTYNASITLDEML+RETK G VAEKIV+YQHANKEVAIICNHQR+V
Sbjct: 703 HLKGLMPGLTAKVFRTYNASITLDEMLSRETKGGNVAEKIVVYQHANKEVAIICNHQRTV 762
Query: 764 SKSHSAQMSRLSEKMDELKAVLDELKTDLVRAKKGKPPLNDADGKPKKNLTPEALEKKIA 585
SKSH AQM+RL+ K+DELK +LD L+TDL RAKKGKPPL DADGKPK+NLTPEALE+KI
Sbjct: 763 SKSHPAQMTRLNGKIDELKGILDGLQTDLARAKKGKPPLEDADGKPKRNLTPEALERKIG 822
Query: 584 QTNAKIEKMERDMKTKEDLKTVALGTSKINYLDPRISVAWCKRHEVPIEKIFNKSLLAKF 405
QTNAKIEKMERD +TKE LKT+ALGTSKI+YLDPRI+VAWCKRHEVPIEK+FNKSLLAKF
Sbjct: 823 QTNAKIEKMERDKETKEGLKTIALGTSKISYLDPRITVAWCKRHEVPIEKVFNKSLLAKF 882
Query: 404 AWSMDVDPTFRF 369
AWSMDVDP+FRF
Sbjct: 883 AWSMDVDPSFRF 894
Score = 158 bits (400), Expect = 1e-35
Identities = 114/302 (37%), Positives = 150/302 (49%), Gaps = 26/302 (8%)
Frame = -2
Query: 3017 MAVDTHITTRHFXXXXXXDEPIVFKRSNITSKQKQLNLEIKKPSFQRHDGSSGKHVADSF 2838
MAV + + DEP+VFKRSN TSK QLN + KK S QR+DG SG+ V+D
Sbjct: 1 MAVQACVKEKMMDEIDEDDEPLVFKRSNATSKHNQLNSDTKKSS-QRYDGQSGRQVSDVP 59
Query: 2837 SPKNQKSSLEKGKXXXXXXXXXXXXXXXXXXXXXXXA------------DKSKHSSEKKL 2694
S Q SS KGK + D+SKHSS++
Sbjct: 60 STNGQSSSASKGKTTKLSSMKSPIASPKASTSFAKASPVANPKVSSSSDDRSKHSSKQNT 119
Query: 2693 AINDREKKPLNKSPIEPNADSDDDKPLSARIFAASTSLPRNNSTHVSEGL---------- 2544
+E+K L EP DS+D+KPLSAR+F T L + +S + ++GL
Sbjct: 120 INVVKEEKELVNPAAEPYGDSEDEKPLSARLF---TGLTKGSSNNANKGLINSSPASLPV 176
Query: 2543 ---SVXXXXXXXXXEIPFSLRFKFKSGAGSSSEKFYDSNEEKPFASKIQQNGSIKGGNEL 2373
+ EIP S +F+ K+ AG+S+ K Y+S++ K S QQNGSI G+
Sbjct: 177 PKPEINRYSDDSDDEIPLSSKFRLKANAGTSTVKSYESDDNKTLVSNFQQNGSINRGS-- 234
Query: 2372 VKSPKVLNKRTLSDANPSAQCPIKKQKLSDISVHGKIGQAHVKAEQKIEDDDDD-VPLSQ 2196
KS +NKR L + S Q +KK KLSD S QA KAE K +D DDD VP+SQ
Sbjct: 235 -KSSIKVNKRPLGEVKSSVQSSVKKPKLSDASTPVNNKQASKKAEPKADDSDDDHVPISQ 293
Query: 2195 RM 2190
RM
Sbjct: 294 RM 295
>ref|XP_002317355.1| DNA topoisomerase family protein [Populus trichocarpa]
gi|222860420|gb|EEE97967.1| DNA topoisomerase family
protein [Populus trichocarpa]
Length = 860
Score = 939 bits (2427), Expect = 0.0
Identities = 458/552 (82%), Positives = 485/552 (87%)
Frame = -2
Query: 2024 PPSFGEGKKWSTLEHNGVIFPPPYKSHGVKMLYNGQPVDLTPEQEEVATMFAVMKDTEYA 1845
P S KKW TL HNGVIFPPPYK HGVKMLY G+PVDLTPEQEEVATMFAVMKDTEY
Sbjct: 309 PGSSDGQKKWKTLVHNGVIFPPPYKPHGVKMLYKGKPVDLTPEQEEVATMFAVMKDTEYV 368
Query: 1844 TKPRFIENFMNDWRLILGKNHIIKKFELCNFTPIYEWHQSEKEKKKQMSTXXXXXXXXXX 1665
KP+F++NF NDWR +LGKNH+I+K E C+F PIYEWHQ EKEKKKQMST
Sbjct: 369 QKPQFLQNFWNDWRTLLGKNHVIQKLEACDFNPIYEWHQKEKEKKKQMSTEEKKAVREEK 428
Query: 1664 XXXXXKYMWAIVDGVKEKVGNFRVEPPGLFRGRGEHPKMGKLKRRIRPSDITINIGKDAP 1485
YMWAIV+GVKEKVGNFRVEPPGLFRGRGEHPKMGKLK RIRPSDITINIGKDAP
Sbjct: 429 LKQEEMYMWAIVNGVKEKVGNFRVEPPGLFRGRGEHPKMGKLKSRIRPSDITINIGKDAP 488
Query: 1484 IPECPIPGQRWKEVKHDNTVTWLAFWNDPINPKEFKYVFLAASSSLKGQSDKEKYEKARV 1305
IP+CPIPG+RWKEVKHDNTVTWLAFWNDPINPKEFKYVFLAASSSLKGQSDKEKYEKAR
Sbjct: 489 IPKCPIPGERWKEVKHDNTVTWLAFWNDPINPKEFKYVFLAASSSLKGQSDKEKYEKARK 548
Query: 1304 LKDYIHDIRATYTKDFASKDITKRQIAVATYLIDKLALRAGNEKDDDEADTVGCCTLKVE 1125
LKDYIH+IR YTKDFASKDITKRQIAVATYLIDKLALRAGNEKDDDEADTVGCCTLKV
Sbjct: 549 LKDYIHNIRTAYTKDFASKDITKRQIAVATYLIDKLALRAGNEKDDDEADTVGCCTLKVA 608
Query: 1124 NVELVPPNKLQFDFLGKDSIRYFNTVEVELPVYKAIGQFKSGKSEGDDLFDKLDTSKLNA 945
NVE +PPNKL+FDFLGKDSIRY NTVEVELPVYKAI QF+ K DDLFD LDTSKLNA
Sbjct: 609 NVECIPPNKLKFDFLGKDSIRYENTVEVELPVYKAIRQFQVAKKPTDDLFDSLDTSKLNA 668
Query: 944 HLKELMPGLTAKVFRTYNASITLDEMLNRETKDGEVAEKIVIYQHANKEVAIICNHQRSV 765
HLKELMPGLTAKVFRTYNASITLDE L ET+DG+VAEK VIY ANK+VAIICNHQR++
Sbjct: 669 HLKELMPGLTAKVFRTYNASITLDEKLYEETEDGDVAEKFVIYNQANKQVAIICNHQRTI 728
Query: 764 SKSHSAQMSRLSEKMDELKAVLDELKTDLVRAKKGKPPLNDADGKPKKNLTPEALEKKIA 585
SKSH AQMSRL+EK++ELK L E KTDL RAKKGKPPL DADGK K+NLTPEA+EKKIA
Sbjct: 729 SKSHDAQMSRLTEKLEELKGTLKEFKTDLDRAKKGKPPLKDADGKQKRNLTPEAIEKKIA 788
Query: 584 QTNAKIEKMERDMKTKEDLKTVALGTSKINYLDPRISVAWCKRHEVPIEKIFNKSLLAKF 405
TN KIEKME MKTKEDLKTVALGTSKINYLDPRI+VAWCKRHEVPIEKIFNKSLLAKF
Sbjct: 789 TTNQKIEKMELSMKTKEDLKTVALGTSKINYLDPRITVAWCKRHEVPIEKIFNKSLLAKF 848
Query: 404 AWSMDVDPTFRF 369
W+MDVDP FRF
Sbjct: 849 TWAMDVDPQFRF 860
Score = 94.7 bits (234), Expect = 2e-16
Identities = 91/260 (35%), Positives = 117/260 (45%), Gaps = 4/260 (1%)
Frame = -2
Query: 2957 PIVFKRS-NITSKQKQLNLEIKKPSFQRHDGSSGKHVADSFSPKNQKSSLEKGKXXXXXX 2781
PIVFKR N TSKQ Q NLE KKPS SS S + KS +
Sbjct: 23 PIVFKRGGNSTSKQNQPNLEAKKPS-----SSSQNSNGQSLNAHKGKSPISSSNASPVKS 77
Query: 2780 XXXXXXXXXXXXXXXXXADKSKHSSEKKLAINDREKKPLNKSPIEPNADSDDDKPLSARI 2601
+S +I +E+ PI + DS+DDKPLS+R
Sbjct: 78 PIGSPKASASSAKASPMKPPVTYSRVPSSSIAVKEE----TKPIVDDDDSEDDKPLSSRF 133
Query: 2600 FAASTSLPRNNSTHVSEGLSV---XXXXXXXXXEIPFSLRFKFKSGAGSSSEKFYDSNEE 2430
+ ++ + ++G++V E+P S RF KS AGSSS K S+E+
Sbjct: 134 --------KGSTNNANKGVTVPARVKDEHSDDDEVPLSSRFAAKSNAGSSSCKTISSSEK 185
Query: 2429 KPFASKIQQNGSIKGGNELVKSPKVLNKRTLSDANPSAQCPIKKQKLSDISVHGKIGQAH 2250
SKIQ NGS ++ KS V KR + + PS Q KK KLSD S Q
Sbjct: 186 ILLVSKIQLNGS-TAKDKQQKSSAVPTKRPMDNKVPSNQSFAKKPKLSDAST---TKQVT 241
Query: 2249 VKAEQKIEDDDDDVPLSQRM 2190
VKAE K DDDD + +SQRM
Sbjct: 242 VKAELK-ADDDDHLTISQRM 260
>dbj|BAG31377.1| topoisomerase I [Catharanthus roseus]
Length = 910
Score = 934 bits (2415), Expect = 0.0
Identities = 456/554 (82%), Positives = 495/554 (89%), Gaps = 2/554 (0%)
Frame = -2
Query: 2024 PPSFGEGKKWSTLEHNGVIFPPPYKSHGVKMLYNGQPVDLTPEQEEVATMFAVMKDTEYA 1845
PPS GEGKKW+ LEHNGVIFPPPYK HG+KMLY G+PVDLTPEQEEVATMFAVM DT+Y
Sbjct: 357 PPSSGEGKKWNKLEHNGVIFPPPYKPHGIKMLYKGKPVDLTPEQEEVATMFAVMLDTDYM 416
Query: 1844 TKPRFIENFMNDWRLILGKNHIIKKFELCNFTPIYEWHQSEKEKKKQMSTXXXXXXXXXX 1665
KPRF ENF DW+ ILGKNH+I+ E C+F+PIYEWHQSEKEKKKQM+T
Sbjct: 417 NKPRFKENFFGDWKKILGKNHVIQNLENCDFSPIYEWHQSEKEKKKQMTTEEKKALKEEK 476
Query: 1664 XXXXXKYMWAIVDGVKEKVGNFRVEPPGLFRGRGEHPKMGKLKRRIRPSDITINIGKDAP 1485
KYMWA VDG KEKVGNFRVEPPGLFRGRGEHPKMGKLK+RIRP DITINIGKDAP
Sbjct: 477 LKQEEKYMWAWVDGKKEKVGNFRVEPPGLFRGRGEHPKMGKLKKRIRPCDITINIGKDAP 536
Query: 1484 IPECPIPGQRWKEVKHDNTVTWLAFWNDPINPKEFKYVFLAASSSLKGQSDKEKYEKARV 1305
IPECP+PG+RWKEV+HDNTVTWLAFWNDPINPKEFKYVFLAASS+LKG SDKEKYEKAR+
Sbjct: 537 IPECPVPGERWKEVRHDNTVTWLAFWNDPINPKEFKYVFLAASSTLKGLSDKEKYEKARL 596
Query: 1304 LKDYIHDIRATYTKDFASKDITKRQIAVATYLIDKLALRAGNEKDDDEADTVGCCTLKVE 1125
LKDYI IRA YTKDFASKD TK+QIAVATYLIDKLALRAGNEKDDDEADTVGCCTLKVE
Sbjct: 597 LKDYIQGIRAAYTKDFASKDPTKKQIAVATYLIDKLALRAGNEKDDDEADTVGCCTLKVE 656
Query: 1124 NVELVPPNKLQFDFLGKDSIRYFNTVEVELPVYKAIGQFKSGKSEGDDLFDKLDTSKLNA 945
NVE VPPN L+FDFLGKDSIRY N VEVE V+KAI QF+SGK DLFD LDTSKLNA
Sbjct: 657 NVEPVPPNILKFDFLGKDSIRYQNEVEVEAAVFKAIQQFRSGKEGSSDLFDLLDTSKLNA 716
Query: 944 HLKELMPGLTAKVFRTYNASITLDEMLNRETKDGEVAEKIVIYQHANKEVAIICNHQRSV 765
HLKELMPGLTAKVFRTYNASITLD+ML+RETK G+VAEK+V+YQHANKEVAIICNHQR+V
Sbjct: 717 HLKELMPGLTAKVFRTYNASITLDDMLSRETKGGDVAEKVVVYQHANKEVAIICNHQRTV 776
Query: 764 SKSHSAQMSRLSEKMDELKAVLDELKTDLVRAKKGKPPL--NDADGKPKKNLTPEALEKK 591
SKSHSAQM RL+EK++ELKAV++ELK+DL R KKGKPPL +ADGKPK+NL PE+LEKK
Sbjct: 777 SKSHSAQMLRLNEKIEELKAVVEELKSDLSRVKKGKPPLKSKNADGKPKRNLNPESLEKK 836
Query: 590 IAQTNAKIEKMERDMKTKEDLKTVALGTSKINYLDPRISVAWCKRHEVPIEKIFNKSLLA 411
IAQTNAKIEKMERD +TKEDLKTVALGTSKINYLDPRI+VAWCKRHEVPIEKIFNKSLLA
Sbjct: 837 IAQTNAKIEKMERDKETKEDLKTVALGTSKINYLDPRITVAWCKRHEVPIEKIFNKSLLA 896
Query: 410 KFAWSMDVDPTFRF 369
KF W+MDVDP+FRF
Sbjct: 897 KFTWAMDVDPSFRF 910
Score = 126 bits (316), Expect = 7e-26
Identities = 101/295 (34%), Positives = 131/295 (44%), Gaps = 38/295 (12%)
Frame = -2
Query: 2960 EPIVFKRSNITSKQKQLNLEIKKPSFQRHDGSSGKHVADSFSPKNQKSSLEKG------- 2802
EPIVFKR+N SKQ Q N E +K S Q+ DG S + + DS + SS +KG
Sbjct: 20 EPIVFKRNNSASKQSQTNSETRKVSSQKRDGQSVRQIYDSRPANGESSSGQKGRMVPPSK 79
Query: 2801 ----KXXXXXXXXXXXXXXXXXXXXXXXADKSKHSSEKKLAINDREK-------KPLNK- 2658
K +K S L N + KP N+
Sbjct: 80 PSQVKSPLSSPPSKPSQVKSPLSSPKVSTSSAKKSPVSSLPANSKPSTSGSFKVKPFNQH 139
Query: 2657 -----------SP-------IEPNADSDDDKPLSARIFAASTSLPRNNSTHVSEGLSVXX 2532
SP I + DSDD KPLS R A+S+ + N+ VS+ S
Sbjct: 140 KSATVIKEEKSSPLRLASAIINDSEDSDDGKPLSLRHSASSS---KGNTNQVSKEGSKPE 196
Query: 2531 XXXXXXXEIPFSLRFKFKSGAGSSSEKFYDSNEEKPFASKIQQNGSIKGGNELVKSPKVL 2352
+ P S RF KSG G S+ K YDS+++KP A K+Q NGS + K +
Sbjct: 197 NEDSDDEK-PLSSRFPLKSGVGESTSKAYDSDDDKPLAKKLQHNGSAMRDGQPNKYSNMS 255
Query: 2351 NKRTLSDANPSAQCPIKKQKLSDISVHGKIGQAHVKAEQKIEDDDDD-VPLSQRM 2190
NKR D S Q +KK KLS ++ QA VK E K EDDDDD +P+SQR+
Sbjct: 256 NKRPPGDIKSSNQLSVKKPKLSSVTAPTNKKQASVKPEPKAEDDDDDHLPISQRI 310
>ref|XP_004149585.1| PREDICTED: DNA topoisomerase 1-like [Cucumis sativus]
gi|449503189|ref|XP_004161878.1| PREDICTED: DNA
topoisomerase 1-like [Cucumis sativus]
Length = 889
Score = 929 bits (2400), Expect = 0.0
Identities = 455/552 (82%), Positives = 497/552 (90%), Gaps = 1/552 (0%)
Frame = -2
Query: 2021 PSFGEG-KKWSTLEHNGVIFPPPYKSHGVKMLYNGQPVDLTPEQEEVATMFAVMKDTEYA 1845
PS G+G KKW+TL HNGVIFPPPY++HGVKMLY G+PVDLTP QEEVATMFAVMKDT+Y
Sbjct: 338 PSAGDGQKKWTTLVHNGVIFPPPYQTHGVKMLYKGKPVDLTPPQEEVATMFAVMKDTDYM 397
Query: 1844 TKPRFIENFMNDWRLILGKNHIIKKFELCNFTPIYEWHQSEKEKKKQMSTXXXXXXXXXX 1665
KP+F ENF NDWR +LGKNH+I+ + C+FTPIY+W+Q EKEKKKQM+T
Sbjct: 398 LKPKFKENFWNDWRKLLGKNHVIQNLDDCDFTPIYDWYQMEKEKKKQMTTEEKKAVKEEK 457
Query: 1664 XXXXXKYMWAIVDGVKEKVGNFRVEPPGLFRGRGEHPKMGKLKRRIRPSDITINIGKDAP 1485
KYMWAI+DGVKEKVGNFRVEPPGLFRGRGEHPKMGKLKRRI PSDITINIGK AP
Sbjct: 458 LKQEEKYMWAILDGVKEKVGNFRVEPPGLFRGRGEHPKMGKLKRRICPSDITINIGKGAP 517
Query: 1484 IPECPIPGQRWKEVKHDNTVTWLAFWNDPINPKEFKYVFLAASSSLKGQSDKEKYEKARV 1305
IPECPIPG+RWKEV+HDNTVTWLAFWNDPIN KEFKYVFLAASSSLKGQSDKEKYEKAR+
Sbjct: 518 IPECPIPGERWKEVRHDNTVTWLAFWNDPINQKEFKYVFLAASSSLKGQSDKEKYEKARM 577
Query: 1304 LKDYIHDIRATYTKDFASKDITKRQIAVATYLIDKLALRAGNEKDDDEADTVGCCTLKVE 1125
LKDYI +IR YTKDF SKD T+RQIAVATYLIDKLALRAGNEKDDDEADTVGCCTLKVE
Sbjct: 578 LKDYIKNIRNAYTKDFTSKDPTRRQIAVATYLIDKLALRAGNEKDDDEADTVGCCTLKVE 637
Query: 1124 NVELVPPNKLQFDFLGKDSIRYFNTVEVELPVYKAIGQFKSGKSEGDDLFDKLDTSKLNA 945
NV+ VPPN L+F+FLGKDSIRY NTVEVELPV+KAI QF+SGKS DDLFDKLDTSKLNA
Sbjct: 638 NVKAVPPNLLEFNFLGKDSIRYENTVEVELPVFKAITQFQSGKSGTDDLFDKLDTSKLNA 697
Query: 944 HLKELMPGLTAKVFRTYNASITLDEMLNRETKDGEVAEKIVIYQHANKEVAIICNHQRSV 765
HLK+LMPGLTAKVFRTYNASITLD+MLNR TK+GEV+EKIV YQHANKEVAIICNHQR+V
Sbjct: 698 HLKDLMPGLTAKVFRTYNASITLDDMLNRGTKNGEVSEKIVTYQHANKEVAIICNHQRTV 757
Query: 764 SKSHSAQMSRLSEKMDELKAVLDELKTDLVRAKKGKPPLNDADGKPKKNLTPEALEKKIA 585
SKSH AQM+RL+EK+ EL+ +L ELK DL RAKKGKPPL +DGK K+NLTPEALEKKI+
Sbjct: 758 SKSHGAQMTRLNEKISELRDILKELKIDLDRAKKGKPPLKGSDGKQKRNLTPEALEKKIS 817
Query: 584 QTNAKIEKMERDMKTKEDLKTVALGTSKINYLDPRISVAWCKRHEVPIEKIFNKSLLAKF 405
QTNAKIEK+ERDMKTKEDLKTVALGTSKINYLDPRI+VAWCKRHEVPIEKIFNKSLLAKF
Sbjct: 818 QTNAKIEKIERDMKTKEDLKTVALGTSKINYLDPRITVAWCKRHEVPIEKIFNKSLLAKF 877
Query: 404 AWSMDVDPTFRF 369
AW+MDVDP FRF
Sbjct: 878 AWAMDVDPDFRF 889
Score = 103 bits (256), Expect = 7e-19
Identities = 89/293 (30%), Positives = 134/293 (45%), Gaps = 17/293 (5%)
Frame = -2
Query: 3017 MAVDTHITTRHFXXXXXXDEPIVFKRSNITSKQKQLNLEIKKPSFQRHDGSSGKHVADSF 2838
MAV+T F + PIVFKR++ S+Q QL+ EIK QR G+ +D
Sbjct: 1 MAVETFGKAPMFDDDDEDNMPIVFKRTS-ASRQNQLDSEIKHSQAQRLSKLPGRQGSDLC 59
Query: 2837 SPKNQKSSLEKGKXXXXXXXXXXXXXXXXXXXXXXXAD-----------KSKHS--SEKK 2697
S Q S+ +K K+ HS S K
Sbjct: 60 STNGQSSNNQKRMTSLPKTSPMRSEIGSQKASRSSPIPEPLTKSLGTSLKASHSMDSRPK 119
Query: 2696 LAINDREKKP-LNKSPIEPNADSDDDKPLSARIFAASTSLPRNNSTHVSEGLSVXXXXXX 2520
+N K+ ++ +P + N+DS+DDKPLS R+ + + P V
Sbjct: 120 SLVNAVVKEENVSINPSQENSDSEDDKPLSIRL-KGNPNQPNKGLVSTVPKNKVKKSLAD 178
Query: 2519 XXXEIPFSLRFKFKSGAGSSSEKFYDSNEEKPFASKIQQNGSIKGGNELVKSPKVLN-KR 2343
E+P S +F+ K +G K + +E+KP K+ QNGS + ++ P VL+ KR
Sbjct: 179 SDDEVPLSSKFQMKHASGVLGSKQHGFDEKKPLVPKVHQNGSTS--RDKLQKPAVLSSKR 236
Query: 2342 TL--SDANPSAQCPIKKQKLSDISVHGKIGQAHVKAEQKIEDDDDDVPLSQRM 2190
L D++ +Q P KK KL+D S +KA+Q+++DDDDD+P+SQRM
Sbjct: 237 PLPNEDSHSPSQFPTKKPKLTDSSSPLNSKLVSLKAKQEVDDDDDDIPISQRM 289
>ref|NP_001157806.1| topoisomerase I [Zea mays] gi|240065169|gb|ACS44671.1| DNA
topoisomerase I [Zea mays]
Length = 904
Score = 925 bits (2391), Expect = 0.0
Identities = 508/906 (56%), Positives = 596/906 (65%), Gaps = 43/906 (4%)
Frame = -2
Query: 2957 PIVFKRSNITSKQKQLNLEIKKPSFQRHDGSSGKHVADSFSPK----NQKSSLEKGKXXX 2790
PI FKR++ ++K +P+ +H GSSG + A PK N + + G
Sbjct: 19 PISFKRTSNSTKTA-------RPTPSKHAGSSGGNGAPVRIPKPVSPNPQKNGATGASRP 71
Query: 2789 XXXXXXXXXXXXXXXXXXXXADKSKHSSEKKLAINDREKKPLNKSPIEPNADS------- 2631
++HSS+ + K+PL K ++D
Sbjct: 72 LHMKPPSSSPNHRPSGSGQPNSLAQHSSKANSIDMSKLKRPLVKDERSDDSDDEVPIGLR 131
Query: 2630 ----------------------DDDKPLSARIFAASTSLPRNNSTHVSEGL-SVXXXXXX 2520
DDDKPL +I ++ S R N + + V
Sbjct: 132 RKVEEKKLKGVDTRVQKTDDSDDDDKPLGLKINSSRMSSNRVNKPVLQRTVPKVEQPDED 191
Query: 2519 XXXEIPFSLRFKFKSGAGSSSEKFYDSNEEKPFA---SKIQQNG------SIKGGNELVK 2367
+ P + R +G S + DS +EKP A SK+ +G S KG
Sbjct: 192 SDDDKPLASRLPSNAGPKSGGDVSEDSEDEKPLAARFSKVAGSGNPKIASSSKGLTSDTN 251
Query: 2366 SPKVLNKRTLSDANPSAQCPIKKQKLSDISVHGKIGQAHVKAEQKIEDDDDDVPLSQRMX 2187
+ L KR L +N ++ +KK K S++S A V+ E K DD+ PL+QR+
Sbjct: 252 GQQSLGKRPLDSSNQTSSA-LKKAKPSNVSA-----SAIVRREIKT---DDNTPLAQRLK 302
Query: 2186 XXXXXXXXXXXXXXXKVFFDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVPPSFGE 2007
F VPP G
Sbjct: 303 MGESSKGKSSAKSV----FKKSPVSVKKDIKKMKGKGKLKKNMKNSQFSKIMKVPPGSGG 358
Query: 2006 GKKWSTLEHNGVIFPPPYKSHGVKMLYNGQPVDLTPEQEEVATMFAVMKDTEYATKPRFI 1827
GKKW+TLEHNGVIFPPPYK HGVKMLYNG+PVDLTPEQEEVATMFAVMKDT+YA KP FI
Sbjct: 359 GKKWTTLEHNGVIFPPPYKPHGVKMLYNGKPVDLTPEQEEVATMFAVMKDTDYAAKPTFI 418
Query: 1826 ENFMNDWRLILGKNHIIKKFELCNFTPIYEWHQSEKEKKKQMSTXXXXXXXXXXXXXXXK 1647
+NF DWR +LGKNHIIK FELC+FTPIYEWH EKE+KKQM+T K
Sbjct: 419 DNFFTDWRKVLGKNHIIKNFELCDFTPIYEWHLREKERKKQMTTEEKKTLREDNLKQEEK 478
Query: 1646 YMWAIVDGVKEKVGNFRVEPPGLFRGRGEHPKMGKLKRRIRPSDITINIGKDAPIPECPI 1467
YMWA+VDGVKEKVGNFRVEPPGLFRGRGEHPKMGKLKRRI PSDITINIGK AP+PECPI
Sbjct: 479 YMWAVVDGVKEKVGNFRVEPPGLFRGRGEHPKMGKLKRRILPSDITINIGKGAPVPECPI 538
Query: 1466 PGQRWKEVKHDNTVTWLAFWNDPINPKEFKYVFLAASSSLKGQSDKEKYEKARVLKDYIH 1287
PG+ WKEVKHDNTVTWLAFWNDPINPK+FKYVFLAASSSLKGQSDKEKYEK+R LK +I
Sbjct: 539 PGESWKEVKHDNTVTWLAFWNDPINPKDFKYVFLAASSSLKGQSDKEKYEKSRKLKGHIQ 598
Query: 1286 DIRATYTKDFASKDITKRQIAVATYLIDKLALRAGNEKDDDEADTVGCCTLKVENVELVP 1107
IR YTKDF +KD+T+RQIAVATYLIDKLALRAGNEKDDDEADTVGCCTLKV+NV +P
Sbjct: 599 RIRENYTKDFKNKDVTRRQIAVATYLIDKLALRAGNEKDDDEADTVGCCTLKVDNVTCMP 658
Query: 1106 PNKLQFDFLGKDSIRYFNTVEVELPVYKAIGQFKSGKSEGDDLFDKLDTSKLNAHLKELM 927
PN++QFDFLGKDSIRYFNTVEVE VYKAI F++GK G DLFDK+DTS+LNAHLK+LM
Sbjct: 659 PNQIQFDFLGKDSIRYFNTVEVEELVYKAIEGFRAGKKPGQDLFDKIDTSRLNAHLKDLM 718
Query: 926 PGLTAKVFRTYNASITLDEMLNRETKDGEVAEKIVIYQHANKEVAIICNHQRSVSKSHSA 747
PGLTAKVFRTYNASITLD +L+ ET+DG V EKI +YQ ANKEVAIICN QRSVSKSH +
Sbjct: 719 PGLTAKVFRTYNASITLDGILHEETEDGTVLEKIAVYQRANKEVAIICNQQRSVSKSHES 778
Query: 746 QMSRLSEKMDELKAVLDELKTDLVRAKKGKPPLNDADGKPKKNLTPEALEKKIAQTNAKI 567
QM+R++EK+DELK+ ++ELK DL +AKKGKP D++GKPK+NL PEA++KK+A KI
Sbjct: 779 QMTRMNEKIDELKSQMEELKADLNKAKKGKPLGYDSEGKPKRNLAPEAIQKKVATLEGKI 838
Query: 566 EKMERDMKTKEDLKTVALGTSKINYLDPRISVAWCKRHEVPIEKIFNKSLLAKFAWSMDV 387
EKME D + KEDLKTVALGTSKINYLDPRI+VAWCKRHEVPIEKIFNKSLLAKF W+MDV
Sbjct: 839 EKMEMDKRIKEDLKTVALGTSKINYLDPRITVAWCKRHEVPIEKIFNKSLLAKFVWAMDV 898
Query: 386 DPTFRF 369
DP FRF
Sbjct: 899 DPEFRF 904
>gb|EMS46223.1| DNA topoisomerase 1 [Triticum urartu]
Length = 947
Score = 919 bits (2376), Expect = 0.0
Identities = 482/782 (61%), Positives = 562/782 (71%), Gaps = 5/782 (0%)
Frame = -2
Query: 2699 KLAINDREKKPLNKSP----IEPNADSDDDKPLSARIFAASTSLPRNN-STHVSEGLSVX 2535
K A N+ KP+ P ++ + DS+D+KPL++R+ + + P++ ST SE
Sbjct: 204 KGASNNSTSKPVLLKPAPKIVQSDDDSEDEKPLASRL--PTNAAPKSRGSTSDSEDEK-- 259
Query: 2534 XXXXXXXXEIPFSLRFKFKSGAGSSSEKFYDSNEEKPFASKIQQNGSIKGGNELVKSPKV 2355
P S RF G +S +S ++ P +K N S N VK P
Sbjct: 260 ----------PLSARFS--RGTAGTSASISNSKDKLPSNNKGPTNNSSAPRNS-VKRPGY 306
Query: 2354 LNKRTLSDANPSAQCPIKKQKLSDISVHGKIGQAHVKAEQKIEDDDDDVPLSQRMXXXXX 2175
N +T S +KK K SD S G + + + +DD + VP+ +++
Sbjct: 307 NNNQTSS--------ALKKTKSSDASASGSVKR------ESTDDDSNSVPVERKLTPGES 352
Query: 2174 XXXXXXXXXXXKVFFDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVPPSFGEGKKW 1995
+ VPP G GKKW
Sbjct: 353 SKSKPPVK-------NIVKSPLSVKKDNKKFKTKTKKTMKSSQFSKSLRVPPGSGGGKKW 405
Query: 1994 STLEHNGVIFPPPYKSHGVKMLYNGQPVDLTPEQEEVATMFAVMKDTEYATKPRFIENFM 1815
STLEHNGVIFPPPY HGVKMLYNGQPV+LTPE+EEVATMFAVMKDTEYATK FI+NF
Sbjct: 406 STLEHNGVIFPPPYNPHGVKMLYNGQPVELTPEEEEVATMFAVMKDTEYATKKTFIDNFF 465
Query: 1814 NDWRLILGKNHIIKKFELCNFTPIYEWHQSEKEKKKQMSTXXXXXXXXXXXXXXXKYMWA 1635
DW+ ILGKNHIIKKFELC+FTPIYEWH EKEKKKQM++ KYMWA
Sbjct: 466 GDWKKILGKNHIIKKFELCDFTPIYEWHLREKEKKKQMTSEEKKALREEKLKQEEKYMWA 525
Query: 1634 IVDGVKEKVGNFRVEPPGLFRGRGEHPKMGKLKRRIRPSDITINIGKDAPIPECPIPGQR 1455
+VDGV+EKVGNFRVEPPGLFRGRGEHPKMGKLKRRIRPSDITINIGK P+PECPI GQ
Sbjct: 526 VVDGVREKVGNFRVEPPGLFRGRGEHPKMGKLKRRIRPSDITINIGKGTPVPECPIEGQS 585
Query: 1454 WKEVKHDNTVTWLAFWNDPINPKEFKYVFLAASSSLKGQSDKEKYEKARVLKDYIHDIRA 1275
WKEVKHDNTVTWLAFWNDPI+ K+FKYVFLAASSSLKGQSDKEKYEK+R LKD+IH+IR
Sbjct: 586 WKEVKHDNTVTWLAFWNDPISQKDFKYVFLAASSSLKGQSDKEKYEKSRKLKDHIHNIRV 645
Query: 1274 TYTKDFASKDITKRQIAVATYLIDKLALRAGNEKDDDEADTVGCCTLKVENVELVPPNKL 1095
YTKDF SKD++K+QIAVATYLIDKLALRAGNEKDDDEADTVGCCTLKV+NV VPPNKL
Sbjct: 646 NYTKDFNSKDVSKKQIAVATYLIDKLALRAGNEKDDDEADTVGCCTLKVDNVTCVPPNKL 705
Query: 1094 QFDFLGKDSIRYFNTVEVELPVYKAIGQFKSGKSEGDDLFDKLDTSKLNAHLKELMPGLT 915
QFDFLGKDSIRYFNTVEVELPVY AI +F++GK +GD +FD+LDT+KLN HLK+LMPGLT
Sbjct: 706 QFDFLGKDSIRYFNTVEVELPVYNAIEEFRTGKKDGDAVFDQLDTTKLNHHLKDLMPGLT 765
Query: 914 AKVFRTYNASITLDEMLNRETKDGEVAEKIVIYQHANKEVAIICNHQRSVSKSHSAQMSR 735
AKVFRTYNASITLD +L+ ET+DG + EKI +YQ ANKEVAIICNHQR+VSKSH QM++
Sbjct: 766 AKVFRTYNASITLDAILHEETEDGTLLEKIAVYQRANKEVAIICNHQRAVSKSHDTQMTK 825
Query: 734 LSEKMDELKAVLDELKTDLVRAKKGKPPLNDADGKPKKNLTPEALEKKIAQTNAKIEKME 555
L+EK+DELKA +DEL DL + K+GKP N ADGKPK+ L PEA+EKKI+Q KIEKME
Sbjct: 826 LNEKIDELKAQVDELNKDLGKVKRGKPLGNGADGKPKRTLAPEAIEKKISQIETKIEKME 885
Query: 554 RDMKTKEDLKTVALGTSKINYLDPRISVAWCKRHEVPIEKIFNKSLLAKFAWSMDVDPTF 375
D KTKEDLKTVALGTSKINYLDPRI+VAWCK HEVPIEKIF+K++LAKF W+MDV+P F
Sbjct: 886 MDKKTKEDLKTVALGTSKINYLDPRITVAWCKTHEVPIEKIFSKTILAKFGWAMDVEPDF 945
Query: 374 RF 369
RF
Sbjct: 946 RF 947
>dbj|BAK32960.1| topoisomerase I [Ophiorrhiza pseudofasciculata]
Length = 925
Score = 916 bits (2367), Expect = 0.0
Identities = 449/553 (81%), Positives = 488/553 (88%), Gaps = 1/553 (0%)
Frame = -2
Query: 2024 PPSFGEGKKWSTLEHNGVIFPPPYKSHGVKMLYNGQPVDLTPEQEEVATMFAVMKDTEYA 1845
PP GEG+KW+TL HNGVIFPPPYK HGVKMLY QP+ LTPEQEEVATMFAVM DT+Y
Sbjct: 373 PPGSGEGQKWTTLVHNGVIFPPPYKPHGVKMLYKRQPITLTPEQEEVATMFAVMLDTDYM 432
Query: 1844 TKPRFIENFMNDWRLILGKNHIIKKFELCNFTPIYEWHQSEKEKKKQMSTXXXXXXXXXX 1665
KP F ENF +DW+ ILGKNH+I+ E C+F PIYEWHQ EKEKKKQM+T
Sbjct: 433 NKPCFKENFFSDWKKILGKNHMIQNLEDCDFGPIYEWHQQEKEKKKQMTTEEKKALKEEK 492
Query: 1664 XXXXXKYMWAIVDGVKEKVGNFRVEPPGLFRGRGEHPKMGKLKRRIRPSDITINIGKDAP 1485
KYMWAIVDGVKEKVGNFRVEPPGLFRGRGEHPKMGKLK+RIRP DITINIGKDAP
Sbjct: 493 LQQEEKYMWAIVDGVKEKVGNFRVEPPGLFRGRGEHPKMGKLKKRIRPRDITINIGKDAP 552
Query: 1484 IPECPIPGQRWKEVKHDNTVTWLAFWNDPINPKEFKYVFLAASSSLKGQSDKEKYEKARV 1305
IPECPIPG+RWKEV++ NTVTWLA+WNDPIN KEFKYVFLAASS+LKGQSDKEKYEKAR+
Sbjct: 553 IPECPIPGERWKEVRNGNTVTWLAYWNDPINQKEFKYVFLAASSTLKGQSDKEKYEKARL 612
Query: 1304 LKDYIHDIRATYTKDFAS-KDITKRQIAVATYLIDKLALRAGNEKDDDEADTVGCCTLKV 1128
LKDYIH IRA YTKDF + KD K+QIAVATYLIDKLALRAGNEKDDDEADTVGCCTLKV
Sbjct: 613 LKDYIHGIRAAYTKDFTNNKDPMKKQIAVATYLIDKLALRAGNEKDDDEADTVGCCTLKV 672
Query: 1127 ENVELVPPNKLQFDFLGKDSIRYFNTVEVELPVYKAIGQFKSGKSEGDDLFDKLDTSKLN 948
ENVE VPPN L+FDFLGKDSIRY N V+VE V+KAI QF+SGK +DLFD+LDTSKLN
Sbjct: 673 ENVEPVPPNILKFDFLGKDSIRYQNEVQVEPAVFKAIQQFRSGKEGSEDLFDRLDTSKLN 732
Query: 947 AHLKELMPGLTAKVFRTYNASITLDEMLNRETKDGEVAEKIVIYQHANKEVAIICNHQRS 768
AHLKELMPGLTAKVFRTYNASITLD+ML++ETK GEVAE +V+YQHANKEVAIICNHQR+
Sbjct: 733 AHLKELMPGLTAKVFRTYNASITLDDMLSKETKGGEVAENVVVYQHANKEVAIICNHQRT 792
Query: 767 VSKSHSAQMSRLSEKMDELKAVLDELKTDLVRAKKGKPPLNDADGKPKKNLTPEALEKKI 588
VSKSHSAQMSRL+EK+DELK L+ELKTDL RAKKGKPP ADGK K+NL PEALE+KI
Sbjct: 793 VSKSHSAQMSRLNEKIDELKTALEELKTDLSRAKKGKPPTKGADGKAKRNLNPEALERKI 852
Query: 587 AQTNAKIEKMERDMKTKEDLKTVALGTSKINYLDPRISVAWCKRHEVPIEKIFNKSLLAK 408
QTNAKIEKMERD +TKEDLKTVALGTSKINYLDPRI+VAWCKRHEVPIEKIFNKSLLAK
Sbjct: 853 TQTNAKIEKMERDKETKEDLKTVALGTSKINYLDPRITVAWCKRHEVPIEKIFNKSLLAK 912
Query: 407 FAWSMDVDPTFRF 369
FAWSMDVDP+FRF
Sbjct: 913 FAWSMDVDPSFRF 925
Score = 125 bits (314), Expect = 1e-25
Identities = 99/282 (35%), Positives = 128/282 (45%), Gaps = 27/282 (9%)
Frame = -2
Query: 2957 PIVFKRSNITSKQKQLNLEIKKPSFQRHDGSSGKHVADSFSPKNQKSSLEKGKXXXXXXX 2778
P++FKRS KQ Q N E KK S Q+ DG S H +D + SS +KG+
Sbjct: 20 PVIFKRSKPAPKQNQANSEKKKLSLQKQDGQSAVHTSDVRPANGESSSAQKGRIQPSAKT 79
Query: 2777 XXXXXXXXXXXXXXXXADKSK------HSSEKKLAINDREKKPLNKSP---IEP------ 2643
A S +S A + +++ +KS IEP
Sbjct: 80 PPVKSPLSSPKASNSSAKASPITSPGANSKPSASATSTAKQQNHHKSSAAFIEPKPSVPA 139
Query: 2642 ------NADSDDDKPLSARIFAASTSLPRNNSTHVSEGLS------VXXXXXXXXXEIPF 2499
+ SDD+KPLSAR F S S ++N + G S V E P
Sbjct: 140 AKANSNSESSDDEKPLSARTFGCS-SKGKSNHANKEGGDSCSIRRPVIEESEDSEDEKPL 198
Query: 2498 SLRFKFKSGAGSSSEKFYDSNEEKPFASKIQQNGSIKGGNELVKSPKVLNKRTLSDANPS 2319
S RF KS G S+ K YDS+E+KP A+K+QQNGS + KS + NKR +A
Sbjct: 199 SCRFTSKSSLGESTSKSYDSDEKKPLAAKVQQNGSASRDGPMNKSASLSNKRPPGEAKSL 258
Query: 2318 AQCPIKKQKLSDISVHGKIGQAHVKAEQKIEDDDDDVPLSQR 2193
Q +KK KLS QA VK E K EDDDD++PLSQR
Sbjct: 259 NQSSVKKPKLSSPITSISNKQAAVKPEPKAEDDDDNIPLSQR 300
>dbj|BAG31375.1| topoisomerase I [Ophiorrhiza japonica]
Length = 927
Score = 916 bits (2367), Expect = 0.0
Identities = 448/553 (81%), Positives = 488/553 (88%), Gaps = 1/553 (0%)
Frame = -2
Query: 2024 PPSFGEGKKWSTLEHNGVIFPPPYKSHGVKMLYNGQPVDLTPEQEEVATMFAVMKDTEYA 1845
PP GEG+KW+TL HNGVIFPPPY HGVKMLY QP+ LTPEQEEVATMFAVM DT+Y
Sbjct: 375 PPGSGEGQKWTTLVHNGVIFPPPYNPHGVKMLYKRQPITLTPEQEEVATMFAVMLDTDYM 434
Query: 1844 TKPRFIENFMNDWRLILGKNHIIKKFELCNFTPIYEWHQSEKEKKKQMSTXXXXXXXXXX 1665
KPRF ENF +DW+ +LGKNH I+ E C+F PIYEWHQ EKEKKKQM+T
Sbjct: 435 NKPRFKENFFSDWKKMLGKNHTIQNLEDCDFGPIYEWHQQEKEKKKQMTTEEKKALKEDK 494
Query: 1664 XXXXXKYMWAIVDGVKEKVGNFRVEPPGLFRGRGEHPKMGKLKRRIRPSDITINIGKDAP 1485
KYMWAIVDGVKEKVGNFRVEPPGLFRGRGEHPKMGKLK+RIRP DITINIGKDAP
Sbjct: 495 LQQEEKYMWAIVDGVKEKVGNFRVEPPGLFRGRGEHPKMGKLKKRIRPRDITINIGKDAP 554
Query: 1484 IPECPIPGQRWKEVKHDNTVTWLAFWNDPINPKEFKYVFLAASSSLKGQSDKEKYEKARV 1305
IPECPIPG+RWKEV++DNTVTWLAFW DPIN KEFKYVFLAASS+LKGQSDKEKYEKAR+
Sbjct: 555 IPECPIPGERWKEVRNDNTVTWLAFWIDPINQKEFKYVFLAASSTLKGQSDKEKYEKARL 614
Query: 1304 LKDYIHDIRATYTKDFAS-KDITKRQIAVATYLIDKLALRAGNEKDDDEADTVGCCTLKV 1128
LKDYIH IRA YTKDF + KD K+QIAVATYLIDKLALRAGNEKDDDEADTVGCCTLKV
Sbjct: 615 LKDYIHGIRAAYTKDFTNNKDPMKKQIAVATYLIDKLALRAGNEKDDDEADTVGCCTLKV 674
Query: 1127 ENVELVPPNKLQFDFLGKDSIRYFNTVEVELPVYKAIGQFKSGKSEGDDLFDKLDTSKLN 948
ENVE VPPN L+FDFLGKDSIRY N V+VE V+KAI QF+SGK +DLFD+LDTSKLN
Sbjct: 675 ENVEPVPPNILKFDFLGKDSIRYQNEVQVEPAVFKAIQQFRSGKEGSEDLFDRLDTSKLN 734
Query: 947 AHLKELMPGLTAKVFRTYNASITLDEMLNRETKDGEVAEKIVIYQHANKEVAIICNHQRS 768
AHLKELMPGLTAKVFRTYNASITLD+ML++ETK GEVAEK+V+YQHANKEVAIICNHQR+
Sbjct: 735 AHLKELMPGLTAKVFRTYNASITLDDMLSKETKGGEVAEKVVVYQHANKEVAIICNHQRT 794
Query: 767 VSKSHSAQMSRLSEKMDELKAVLDELKTDLVRAKKGKPPLNDADGKPKKNLTPEALEKKI 588
VSKSHSAQMSRL+EK+DELK ++ELKTDL R KKGKPP ADGKPK+NL PEALE+K+
Sbjct: 795 VSKSHSAQMSRLNEKIDELKTAMEELKTDLSRVKKGKPPSKGADGKPKRNLNPEALERKM 854
Query: 587 AQTNAKIEKMERDMKTKEDLKTVALGTSKINYLDPRISVAWCKRHEVPIEKIFNKSLLAK 408
AQ NAKIEKMERD +TKEDLKTVALGTSKINYLDPRI+VAWCKRHEVPIEKIFNKSLLAK
Sbjct: 855 AQINAKIEKMERDKETKEDLKTVALGTSKINYLDPRITVAWCKRHEVPIEKIFNKSLLAK 914
Query: 407 FAWSMDVDPTFRF 369
FAWSMDVDP+FRF
Sbjct: 915 FAWSMDVDPSFRF 927
Score = 125 bits (313), Expect = 2e-25
Identities = 98/284 (34%), Positives = 130/284 (45%), Gaps = 29/284 (10%)
Frame = -2
Query: 2957 PIVFKRSNITSKQKQLNLEIKKPSFQRHDGSSGKHVADSFSPKNQKSSLEKGKXXXXXXX 2778
P++FKRSN SKQ Q N E KK S Q+H G S H +D + SS +KG+
Sbjct: 20 PVIFKRSNPASKQNQANSEKKKLSLQKHVGQSAVHTSDVRPANGESSSAQKGRIQPSAKT 79
Query: 2777 XXXXXXXXXXXXXXXXADKSK------HSSEKKLAINDREKKPLNKSP---IEP------ 2643
A S +S A + +++ +KS IEP
Sbjct: 80 PPVKSPLSSPKASNSSAKASPITSPGANSKPSASATSTAKQQNHHKSSAAFIEPKPSVPA 139
Query: 2642 ------NADSDDDKPLSARIFAASTSLPRNNSTHVSEGLS------VXXXXXXXXXEIPF 2499
+ SDD+KPLSAR F S S ++N + G S V E P
Sbjct: 140 AKANSNSESSDDEKPLSARTFGCS-SKGKSNHANKEGGDSCSIRRRVIEESEDSEDEKPL 198
Query: 2498 SLRFKFKSGAGSSSEKFYDSNEEKPFASKIQQNGSIKGGNELVKSPKVLNKRTLSDANPS 2319
S RF KS G S+ K YDS+E+KP A+K+QQNGS+ + KS + NKR +
Sbjct: 199 SRRFTSKSSLGESTSKSYDSDEKKPLAAKVQQNGSVSRDGPMNKSASLSNKRPPGEVKSL 258
Query: 2318 AQCPIKKQKLSD--ISVHGKIGQAHVKAEQKIEDDDDDVPLSQR 2193
Q +KK KLS S+ K + E K EDDDD++PLSQR
Sbjct: 259 NQSSVKKPKLSSPITSISNKQAAVKPEPEPKAEDDDDNIPLSQR 302
>ref|XP_006364175.1| PREDICTED: LOW QUALITY PROTEIN: DNA topoisomerase 1-like [Solanum
tuberosum]
Length = 905
Score = 914 bits (2363), Expect = 0.0
Identities = 443/551 (80%), Positives = 487/551 (88%)
Frame = -2
Query: 2021 PSFGEGKKWSTLEHNGVIFPPPYKSHGVKMLYNGQPVDLTPEQEEVATMFAVMKDTEYAT 1842
PS G+G+KW+TLEHNGVIFPPPYK HGVKMLY G+PVDLTPEQEEVATM+AVM DTEY T
Sbjct: 355 PSSGDGQKWTTLEHNGVIFPPPYKPHGVKMLYKGKPVDLTPEQEEVATMYAVMLDTEYLT 414
Query: 1841 KPRFIENFMNDWRLILGKNHIIKKFELCNFTPIYEWHQSEKEKKKQMSTXXXXXXXXXXX 1662
K +F ENFMNDWR ILGKNH+I+K E CNFTPIYEWHQSEKEKKKQMS+
Sbjct: 415 KQQFKENFMNDWRKILGKNHVIQKLEECNFTPIYEWHQSEKEKKKQMSSEEKKALREEKL 474
Query: 1661 XXXXKYMWAIVDGVKEKVGNFRVEPPGLFRGRGEHPKMGKLKRRIRPSDITINIGKDAPI 1482
KYMWAIVDGVKEKVGNFRVEPPGLFRGRGEHPKMGKLKRRIRP+DITINIGK P+
Sbjct: 475 KQEEKYMWAIVDGVKEKVGNFRVEPPGLFRGRGEHPKMGKLKRRIRPNDITINIGKGVPV 534
Query: 1481 PECPIPGQRWKEVKHDNTVTWLAFWNDPINPKEFKYVFLAASSSLKGQSDKEKYEKARVL 1302
PECPIPGQRWKEV+HDNTVTWLAFWNDPINP+EFKYVFLAASSSLKGQSDKEKYEKAR L
Sbjct: 535 PECPIPGQRWKEVRHDNTVTWLAFWNDPINPREFKYVFLAASSSLKGQSDKEKYEKARRL 594
Query: 1301 KDYIHDIRATYTKDFASKDITKRQIAVATYLIDKLALRAGNEKDDDEADTVGCCTLKVEN 1122
KDYI IR+ YTKDF SKD KRQIAVATYLIDKLALRAGNEKDDDEADTVGCCTLKVEN
Sbjct: 595 KDYIEGIRSAYTKDFTSKDPVKRQIAVATYLIDKLALRAGNEKDDDEADTVGCCTLKVEN 654
Query: 1121 VELVPPNKLQFDFLGKDSIRYFNTVEVELPVYKAIGQFKSGKSEGDDLFDKLDTSKLNAH 942
VE VPPN L+FDFLGKDSIRY N V V PV+KAI QF+SGK GDDLFDKLDTSKLNAH
Sbjct: 655 VEPVPPNILKFDFLGKDSIRYQNEVAVYEPVFKAIQQFRSGKKGGDDLFDKLDTSKLNAH 714
Query: 941 LKELMPGLTAKVFRTYNASITLDEMLNRETKDGEVAEKIVIYQHANKEVAIICNHQRSVS 762
LKELMPGLTAKVFRTYNAS TL++ L + T+ GE+A+K+ +Y ANKEVAIICNHQR+VS
Sbjct: 715 LKELMPGLTAKVFRTYNASFTLEQQLTKLTQGGELADKVAVYNVANKEVAIICNHQRTVS 774
Query: 761 KSHSAQMSRLSEKMDELKAVLDELKTDLVRAKKGKPPLNDADGKPKKNLTPEALEKKIAQ 582
KSHS Q+SRL+EK+DELKA+L+E K DL RAKKGKPP+ ADGK K+NLTPEAL+KKI Q
Sbjct: 775 KSHSVQISRLNEKIDELKAILEEFKVDLARAKKGKPPVKGADGKAKRNLTPEALQKKIDQ 834
Query: 581 TNAKIEKMERDMKTKEDLKTVALGTSKINYLDPRISVAWCKRHEVPIEKIFNKSLLAKFA 402
TN KI+ +ER ++TKE+LKTVALGTSKINYLDPRI+VAWCKRHEVPIEK+FNKSLLAKFA
Sbjct: 835 TNVKIDNIERQIETKEELKTVALGTSKINYLDPRITVAWCKRHEVPIEKMFNKSLLAKFA 894
Query: 401 WSMDVDPTFRF 369
W+MDV+P+F F
Sbjct: 895 WAMDVEPSFTF 905
Score = 80.5 bits (197), Expect = 5e-12
Identities = 67/178 (37%), Positives = 89/178 (50%), Gaps = 11/178 (6%)
Frame = -2
Query: 2690 INDREKKPLNKSPIEPN---ADSDDDKPLSARI---FAASTSLPRNN--STHVSEGLSVX 2535
I +E K + EPN DS+DDKPLSAR+ + S S+ NN T S S
Sbjct: 144 IAPKESKQAIEPKSEPNDEAEDSEDDKPLSARVPSGLSKSNSIHANNVLGTSTSVQKSRP 203
Query: 2534 XXXXXXXXEIPFSLRFKFKSGAGSSSEKFYDSNEEKPFASKIQQNGSIKGGNELVKSPKV 2355
EIP + RF+ KS AG+S+ KF S E KP KI+QNG + S V
Sbjct: 204 PKKEDSDDEIPLASRFQMKSSAGASTSKFSSSEEVKP---KIRQNG--------LPSATV 252
Query: 2354 LNKRTLSDANPSAQCPIKKQKLSDISVHGK---IGQAHVKAEQKIEDDDDDVPLSQRM 2190
L+KR + + + +K D +H + VK E+K EDDDD+VPLSQR+
Sbjct: 253 LSKRPPGEVSLLLRLQLKSL---DFLMHLHLFLVSNXSVKTEKKTEDDDDEVPLSQRI 307
>ref|XP_006659124.1| PREDICTED: DNA topoisomerase 1-like [Oryza brachyantha]
Length = 911
Score = 914 bits (2362), Expect = 0.0
Identities = 442/552 (80%), Positives = 486/552 (88%)
Frame = -2
Query: 2024 PPSFGEGKKWSTLEHNGVIFPPPYKSHGVKMLYNGQPVDLTPEQEEVATMFAVMKDTEYA 1845
PP G G+KW+TL HNGVIFPPPYK HGVKMLYNGQPVDLTPEQEEVATMF+VMKDT+YA
Sbjct: 360 PPGSGGGQKWTTLVHNGVIFPPPYKPHGVKMLYNGQPVDLTPEQEEVATMFSVMKDTDYA 419
Query: 1844 TKPRFIENFMNDWRLILGKNHIIKKFELCNFTPIYEWHQSEKEKKKQMSTXXXXXXXXXX 1665
+K FI+NF DWR ILGKNHIIKKFELC+FTPIYEWH EKEKKKQM++
Sbjct: 420 SKQTFIDNFFTDWRKILGKNHIIKKFELCDFTPIYEWHLREKEKKKQMTSEEKKAVKEEK 479
Query: 1664 XXXXXKYMWAIVDGVKEKVGNFRVEPPGLFRGRGEHPKMGKLKRRIRPSDITINIGKDAP 1485
KYMWA+VDGVKEKVGNFRVEPPGLFRGRGEHPKMGKLKRRI+PSDITINIGK AP
Sbjct: 480 LKQEEKYMWAVVDGVKEKVGNFRVEPPGLFRGRGEHPKMGKLKRRIQPSDITINIGKGAP 539
Query: 1484 IPECPIPGQRWKEVKHDNTVTWLAFWNDPINPKEFKYVFLAASSSLKGQSDKEKYEKARV 1305
IPECPIPG+ WKEVKHDNTVTWLAFWNDPI+ K+FKYVFLAASS+LKGQSDKEKYEK+R
Sbjct: 540 IPECPIPGESWKEVKHDNTVTWLAFWNDPISQKDFKYVFLAASSALKGQSDKEKYEKSRK 599
Query: 1304 LKDYIHDIRATYTKDFASKDITKRQIAVATYLIDKLALRAGNEKDDDEADTVGCCTLKVE 1125
LK +IH IR TYTKDF SKD TK+QIAVATYLIDKLALRAGNEKDDDEA+TVGCCTLKV+
Sbjct: 600 LKHHIHKIRDTYTKDFRSKDKTKKQIAVATYLIDKLALRAGNEKDDDEAETVGCCTLKVD 659
Query: 1124 NVELVPPNKLQFDFLGKDSIRYFNTVEVELPVYKAIGQFKSGKSEGDDLFDKLDTSKLNA 945
NV VPPN LQFDFLGKDSIRYFNTVEVELPVYKAI +F++GK GDDLFDKLDT++LNA
Sbjct: 660 NVTCVPPNNLQFDFLGKDSIRYFNTVEVELPVYKAIEEFRAGKKPGDDLFDKLDTTRLNA 719
Query: 944 HLKELMPGLTAKVFRTYNASITLDEMLNRETKDGEVAEKIVIYQHANKEVAIICNHQRSV 765
HLK+LMPGLTAKVFRTYNASITLD++L++ET+DG + EKI +YQ ANKEVAIICNHQRSV
Sbjct: 720 HLKDLMPGLTAKVFRTYNASITLDDILHKETEDGTLLEKIAVYQRANKEVAIICNHQRSV 779
Query: 764 SKSHSAQMSRLSEKMDELKAVLDELKTDLVRAKKGKPPLNDADGKPKKNLTPEALEKKIA 585
SKSH +QM+RL+EK+DELKA DELK DL + KKGK D DGKPK+NL PEA EKKI+
Sbjct: 780 SKSHDSQMTRLNEKIDELKAQRDELKADLSKVKKGKSLGYDKDGKPKRNLAPEAFEKKIS 839
Query: 584 QTNAKIEKMERDMKTKEDLKTVALGTSKINYLDPRISVAWCKRHEVPIEKIFNKSLLAKF 405
Q KIEKME D K KEDLKTVALGTSKINYLDPRI+VAWCKRHEVPIEKIFNKSL+AKF
Sbjct: 840 QVETKIEKMEMDKKIKEDLKTVALGTSKINYLDPRITVAWCKRHEVPIEKIFNKSLIAKF 899
Query: 404 AWSMDVDPTFRF 369
+W+MDVDP FRF
Sbjct: 900 SWAMDVDPDFRF 911
>ref|XP_007201211.1| hypothetical protein PRUPE_ppa001622mg [Prunus persica]
gi|462396611|gb|EMJ02410.1| hypothetical protein
PRUPE_ppa001622mg [Prunus persica]
Length = 790
Score = 914 bits (2362), Expect = 0.0
Identities = 442/553 (79%), Positives = 493/553 (89%), Gaps = 1/553 (0%)
Frame = -2
Query: 2024 PPSFGEG-KKWSTLEHNGVIFPPPYKSHGVKMLYNGQPVDLTPEQEEVATMFAVMKDTEY 1848
PPS +G KKW++L HNGVIFPPPYK HGVKMLY+G+PV L+PEQEEVATM+AVMKDT+Y
Sbjct: 238 PPSSNDGQKKWTSLVHNGVIFPPPYKPHGVKMLYSGKPVTLSPEQEEVATMYAVMKDTDY 297
Query: 1847 ATKPRFIENFMNDWRLILGKNHIIKKFELCNFTPIYEWHQSEKEKKKQMSTXXXXXXXXX 1668
K F NF NDW +LGKNHII+K + C+FTPIY+W+Q+EKEKKKQMST
Sbjct: 298 VQKQTFRNNFWNDWHKLLGKNHIIQKLDACDFTPIYDWYQNEKEKKKQMSTEEKKALKED 357
Query: 1667 XXXXXXKYMWAIVDGVKEKVGNFRVEPPGLFRGRGEHPKMGKLKRRIRPSDITINIGKDA 1488
KYMWA+VDGVKEKVGNFRVEPPGLFRGRGEHPK GKLKRRIRPSD+TINIGKDA
Sbjct: 358 KLKEEEKYMWAVVDGVKEKVGNFRVEPPGLFRGRGEHPKSGKLKRRIRPSDVTINIGKDA 417
Query: 1487 PIPECPIPGQRWKEVKHDNTVTWLAFWNDPINPKEFKYVFLAASSSLKGQSDKEKYEKAR 1308
PIPECPIPG+ WKEV+HDNTVTWLAFWNDPIN +EFKYVFLA SSSLKGQSDKEKYEKAR
Sbjct: 418 PIPECPIPGESWKEVRHDNTVTWLAFWNDPINQREFKYVFLAPSSSLKGQSDKEKYEKAR 477
Query: 1307 VLKDYIHDIRATYTKDFASKDITKRQIAVATYLIDKLALRAGNEKDDDEADTVGCCTLKV 1128
+LKDYI +IRA YT+DF SKD TKRQIAVATYLIDKLALRAGNEKDDDEADTVGCCTLKV
Sbjct: 478 MLKDYIGNIRAAYTRDFTSKDGTKRQIAVATYLIDKLALRAGNEKDDDEADTVGCCTLKV 537
Query: 1127 ENVELVPPNKLQFDFLGKDSIRYFNTVEVELPVYKAIGQFKSGKSEGDDLFDKLDTSKLN 948
ENV+ + PN L+F+FLGKDSIRY NTVEVE+PVYKAI QF++GK DDLFD+LDTSKLN
Sbjct: 538 ENVKAIAPNSLEFNFLGKDSIRYENTVEVEIPVYKAIIQFQTGKRGCDDLFDRLDTSKLN 597
Query: 947 AHLKELMPGLTAKVFRTYNASITLDEMLNRETKDGEVAEKIVIYQHANKEVAIICNHQRS 768
AHLKELMPGLTAKVFRTYNASITLD +LN+ETK+G+++EK+V+YQHANKEVAIICNHQR+
Sbjct: 598 AHLKELMPGLTAKVFRTYNASITLDNILNKETKEGDLSEKVVVYQHANKEVAIICNHQRT 657
Query: 767 VSKSHSAQMSRLSEKMDELKAVLDELKTDLVRAKKGKPPLNDADGKPKKNLTPEALEKKI 588
+SK+HSAQMSRL EK+ L+++L ELKTDL RAKKG+PPL DADGK K+NLTPEALE+KI
Sbjct: 658 ISKTHSAQMSRLLEKIGNLQSILKELKTDLDRAKKGRPPLKDADGKQKRNLTPEALERKI 717
Query: 587 AQTNAKIEKMERDMKTKEDLKTVALGTSKINYLDPRISVAWCKRHEVPIEKIFNKSLLAK 408
AQT KIEKME DM+TKEDLKTVALGTSKINYLDPRI+VAWCKRHEVPIEKIFNKSLLAK
Sbjct: 718 AQTTVKIEKMELDMRTKEDLKTVALGTSKINYLDPRITVAWCKRHEVPIEKIFNKSLLAK 777
Query: 407 FAWSMDVDPTFRF 369
FAWSMDVDP FRF
Sbjct: 778 FAWSMDVDPDFRF 790
Score = 75.9 bits (185), Expect = 1e-10
Identities = 77/260 (29%), Positives = 105/260 (40%), Gaps = 3/260 (1%)
Frame = -2
Query: 2960 EPIVFKRSNITSKQKQLNLEIKKPSFQRHDGSSGKHVADSFSPKNQKSSLEKGKXXXXXX 2781
+P+VFKRSN SKQ QL+ ++K+ Q S + K + +S+E
Sbjct: 18 KPLVFKRSNAKSKQNQLDGQLKQLPVQNK----------STTIKEESNSIE--------- 58
Query: 2780 XXXXXXXXXXXXXXXXXADKSKHSSEKKLAINDREKKPLNKSPIEPNADSDDDKPLSARI 2601
H +E+ + + KP+ +P DSDDDKPLS+RI
Sbjct: 59 ----------------------HPAEENS--DSEDAKPIKARLGKPCEDSDDDKPLSSRI 94
Query: 2600 FAASTSLPRNNSTHVSEGLSVXXXXXXXXXEIPFSLRFKFKSGAGSSSEKFYDSNEEKPF 2421
P+ G+S + DS E KP
Sbjct: 95 ------TPKK---------------------------------VGTSGSQPCDSKERKPV 115
Query: 2420 ASKIQQNGSI---KGGNELVKSPKVLNKRTLSDANPSAQCPIKKQKLSDISVHGKIGQAH 2250
ASK+Q+N S KG V S KR L AN S + K+ K+SD S K Q
Sbjct: 116 ASKVQKNCSSTTDKGKTSYVIS----TKRPLDKANISEKSSAKRPKVSDSSTSIKNMQVS 171
Query: 2249 VKAEQKIEDDDDDVPLSQRM 2190
K E K EDDDD +P+SQR+
Sbjct: 172 AKKEPKGEDDDDFIPISQRI 191