BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Akebia27_contig00002093
         (2703 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002265386.1| PREDICTED: DNA topoisomerase 1-like [Vitis v...   779   0.0  
dbj|BAG31376.1| topoisomerase I [Camptotheca acuminata]               741   0.0  
ref|XP_007020664.1| DNA topoisomerase I alpha isoform 1 [Theobro...   768   0.0  
emb|CBI28783.3| unnamed protein product [Vitis vinifera]              779   0.0  
ref|XP_006474977.1| PREDICTED: DNA topoisomerase 1-like isoform ...   752   0.0  
ref|XP_006452479.1| hypothetical protein CICLE_v10007398mg [Citr...   751   0.0  
dbj|BAG31377.1| topoisomerase I [Catharanthus roseus]                 740   0.0  
ref|XP_004149585.1| PREDICTED: DNA topoisomerase 1-like [Cucumis...   742   0.0  
ref|XP_002300344.1| DNA topoisomerase family protein [Populus tr...   748   0.0  
ref|XP_002266885.1| PREDICTED: DNA topoisomerase 1 [Vitis vinife...   747   0.0  
dbj|BAK32960.1| topoisomerase I [Ophiorrhiza pseudofasciculata]       744   0.0  
ref|XP_002317355.1| DNA topoisomerase family protein [Populus tr...   745   0.0  
dbj|BAG31375.1| topoisomerase I [Ophiorrhiza japonica]                744   0.0  
dbj|BAK32962.1| topoisomerase I [Ophiorrhiza trichocarpon var. g...   727   0.0  
dbj|BAK32958.1| topoisomerase I [Ophiorrhiza pedunculata]             727   0.0  
gb|EYU30724.1| hypothetical protein MIMGU_mgv1a001121mg [Mimulus...   730   0.0  
dbj|BAG31374.1| topoisomerase I [Ophiorrhiza liukiuensis]             730   0.0  
ref|XP_002529020.1| DNA topoisomerase type I, putative [Ricinus ...   729   0.0  
dbj|BAK32956.1| topoisomerase I [Ophiorrhiza fucosa]                  721   0.0  
ref|XP_007201211.1| hypothetical protein PRUPE_ppa001622mg [Prun...   742   0.0  

>ref|XP_002265386.1| PREDICTED: DNA topoisomerase 1-like [Vitis vinifera]
          Length = 883

 Score =  779 bits (2012), Expect(2) = 0.0
 Identities = 380/425 (89%), Positives = 399/425 (93%)
 Frame = +2

Query: 1382 MWAIVDGVKEKVGNFRVEPPGLFRGRGEHPKMGKLKRRIRPRDITINIGKDAPIPECPIP 1561
            MWA+VDGVKEKVGNFRVEPPGLFRGRGEHPKMGKLK+RI P DITINIGK+AP+PECPIP
Sbjct: 459  MWAVVDGVKEKVGNFRVEPPGLFRGRGEHPKMGKLKKRICPSDITINIGKEAPVPECPIP 518

Query: 1562 GERWKEVKHDNTVTWLAFWNDPINPKEFKYVFLAASSSLKGQSDKEKYEKARLLKDYIHN 1741
            GERWKEV+HDNTVTWLAFWNDPINPKEFKYVFLAASSSLKGQSDKEKYEKARLLKDYI N
Sbjct: 519  GERWKEVRHDNTVTWLAFWNDPINPKEFKYVFLAASSSLKGQSDKEKYEKARLLKDYIQN 578

Query: 1742 IRANYTKDFVSKDISKRQIAVATYLIDKLALRAGNEKDDDEADTVGCCTLKVENVSLVPP 1921
            IRA YTKDF +KD  KRQIAVATYLIDKLALRAGNEKDDDEADTVGCCTLKVENV+LVPP
Sbjct: 579  IRATYTKDFTNKDTMKRQIAVATYLIDKLALRAGNEKDDDEADTVGCCTLKVENVALVPP 638

Query: 1922 NQLQFDFLGKDSIRYFNTVEVELPVYKAIGLFKSGKKDGEDLFDKLDTNKLNAHLKELMP 2101
            N+L+FDFLGKDSIRYFNTVEVELPVYKAIG FK+GK  G+DLFDKLDT+KLNAHLKELMP
Sbjct: 639  NKLEFDFLGKDSIRYFNTVEVELPVYKAIGQFKTGKSGGDDLFDKLDTSKLNAHLKELMP 698

Query: 2102 GLTAKVFRTYNASITLDGMLSNETKAGDVAEKIVIYQHANKEVAIICNHQRSVSKSHTAQ 2281
            GLTAKVFRTYNASITLD ML+ E + GD  EKIVIYQHANKEVAIICNHQRSVSKSH  Q
Sbjct: 699  GLTAKVFRTYNASITLDEMLNREARGGDAMEKIVIYQHANKEVAIICNHQRSVSKSHDVQ 758

Query: 2282 MSRLSEKMDELKAVMDELKTDLTRAKKGKPPLKDADGKQKKNLAPEALERKIAQTNAKIE 2461
            MSRLSEKM EL+ V+DELKTDL RAKKGKPPLKD+DGK KKN+ PE LERKIAQTN KIE
Sbjct: 759  MSRLSEKMRELQGVLDELKTDLARAKKGKPPLKDSDGKPKKNMTPEVLERKIAQTNTKIE 818

Query: 2462 KMERDMRTKEDLKTVALGTSKINYLDPRISVAWCKRHEVPIEKIFNKSLLAKFAWAMDVD 2641
            KMERDM+TKEDLKTVALGTSKINYLDPRISVAWCKR EVPIEKIFNKSLLAKFAWAMDVD
Sbjct: 819  KMERDMKTKEDLKTVALGTSKINYLDPRISVAWCKRQEVPIEKIFNKSLLAKFAWAMDVD 878

Query: 2642 PSFRF 2656
            PSFRF
Sbjct: 879  PSFRF 883



 Score =  285 bits (729), Expect(2) = 0.0
 Identities = 162/324 (50%), Positives = 187/324 (57%), Gaps = 7/324 (2%)
 Frame = +1

Query: 421  SEDSDDDKPLSYRLPIASTTLPKSNSPRVSKGLXXXXXXXXXXEKAKVNXXXXXXXXXXX 600
            S+DS+D+ PL  +L + S     S+    SKGL          +KAKVN           
Sbjct: 114  SDDSEDEIPLLLKLQLKSRKGASSSKLLDSKGLSSPASSRPQSQKAKVNNKNLSDDSEDE 173

Query: 601  XXXXXRFKLKSCGPSSVKKYDS-DEEKPLASKILQNGSNKRDSELVKSHKVLNKRPLSDV 777
                 +F+LK+   +S+ K D+ DE+KPL S +  NG +K+D E VKS K  NKRPL   
Sbjct: 174  IPLSSKFRLKTGMGASLDKLDNFDEKKPLTSTLKPNGISKKDDERVKSPKGQNKRPLGQA 233

Query: 778  STSVQSAVKKPKLSDAXXXXXXXXXXXXAESKTDDDDD------YVPIGQRMKKLTVPDN 939
            +TS  S+ KKPKL D             AE K DDDDD      Y P  +R+KK    DN
Sbjct: 234  NTSHHSSSKKPKLLDGSVKGKVKQVSVKAEQKDDDDDDNDDDDEYTPTVKRLKKSVSSDN 293

Query: 940  KSQSAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTKVPPGSGEGQKWTTLVH 1119
            K  S                                      TKVPP SGEGQKWTTL H
Sbjct: 294  KKASKTKVIPSSRKKATKKAKKSKKLAKSSKYSKS-------TKVPPNSGEGQKWTTLEH 346

Query: 1120 SGVIFPPPYKPHGVKMLYNGQPVQLTPEQEEVATMFAVMKDTDYATKPKFIENFMTDWRP 1299
            +GVIFPPPYKPHGVKMLYNG+PV LTPEQEEVATMFAVMKDTDYATKP+FIENFM DWR 
Sbjct: 347  NGVIFPPPYKPHGVKMLYNGRPVDLTPEQEEVATMFAVMKDTDYATKPRFIENFMNDWRV 406

Query: 1300 ILGKNHVIKKFELCDFTPIYEWHQ 1371
             LGKNHVIKKFELCDFTPIYEWH+
Sbjct: 407  RLGKNHVIKKFELCDFTPIYEWHE 430


>dbj|BAG31376.1| topoisomerase I [Camptotheca acuminata]
          Length = 894

 Score =  741 bits (1914), Expect(2) = 0.0
 Identities = 362/425 (85%), Positives = 392/425 (92%)
 Frame = +2

Query: 1382 MWAIVDGVKEKVGNFRVEPPGLFRGRGEHPKMGKLKRRIRPRDITINIGKDAPIPECPIP 1561
            MWAIV+GVKEKVGNFRVEPP LFRGRGEHPKMGKLK+ IRP DITINIGKDAPIPECPIP
Sbjct: 470  MWAIVNGVKEKVGNFRVEPPSLFRGRGEHPKMGKLKKCIRPSDITINIGKDAPIPECPIP 529

Query: 1562 GERWKEVKHDNTVTWLAFWNDPINPKEFKYVFLAASSSLKGQSDKEKYEKARLLKDYIHN 1741
            GE WKE++HDNTVTWLAFWNDPI P+EFKYVFLAASSSLKGQSDKEKYEKARLLKD+I  
Sbjct: 530  GESWKEIRHDNTVTWLAFWNDPIKPREFKYVFLAASSSLKGQSDKEKYEKARLLKDFIQG 589

Query: 1742 IRANYTKDFVSKDISKRQIAVATYLIDKLALRAGNEKDDDEADTVGCCTLKVENVSLVPP 1921
            IRA YTKDF SKDI+KRQIAVATYLIDKLALRAGNEKDDDEADTVGCCTLKVENV   PP
Sbjct: 590  IRAAYTKDFASKDITKRQIAVATYLIDKLALRAGNEKDDDEADTVGCCTLKVENVEPKPP 649

Query: 1922 NQLQFDFLGKDSIRYFNTVEVELPVYKAIGLFKSGKKDGEDLFDKLDTNKLNAHLKELMP 2101
            + L+FDFLGKDSIRY N VEVELPVYKAI  F++GK+ G+DLFDKLDT+KLNAHLK LMP
Sbjct: 650  SILKFDFLGKDSIRYQNEVEVELPVYKAIQQFRTGKRGGDDLFDKLDTSKLNAHLKGLMP 709

Query: 2102 GLTAKVFRTYNASITLDGMLSNETKAGDVAEKIVIYQHANKEVAIICNHQRSVSKSHTAQ 2281
            GLTAKVFRTYNASITLD MLS ETK G+VAEKIV+YQHANKEVAIICNHQR+VSKSH AQ
Sbjct: 710  GLTAKVFRTYNASITLDEMLSRETKGGNVAEKIVVYQHANKEVAIICNHQRTVSKSHPAQ 769

Query: 2282 MSRLSEKMDELKAVMDELKTDLTRAKKGKPPLKDADGKQKKNLAPEALERKIAQTNAKIE 2461
            M+RL+ K+DELK ++D L+TDL RAKKGKPPL+DADGK K+NL PEALERKI QTNAKIE
Sbjct: 770  MTRLNGKIDELKGILDGLQTDLARAKKGKPPLEDADGKPKRNLTPEALERKIGQTNAKIE 829

Query: 2462 KMERDMRTKEDLKTVALGTSKINYLDPRISVAWCKRHEVPIEKIFNKSLLAKFAWAMDVD 2641
            KMERD  TKE LKT+ALGTSKI+YLDPRI+VAWCKRHEVPIEK+FNKSLLAKFAW+MDVD
Sbjct: 830  KMERDKETKEGLKTIALGTSKISYLDPRITVAWCKRHEVPIEKVFNKSLLAKFAWSMDVD 889

Query: 2642 PSFRF 2656
            PSFRF
Sbjct: 890  PSFRF 894



 Score =  320 bits (819), Expect(2) = 0.0
 Identities = 203/456 (44%), Positives = 231/456 (50%), Gaps = 13/456 (2%)
 Frame = +1

Query: 43   MAVDTCVKPKFFXXXXXXXEPIVFKRNKTISKQNQLNSEIKKPSSQNDGLSGRHPRDAVS 222
            MAV  CVK K         EP+VFKR+   SK NQLNS+ KK S + DG SGR   D  S
Sbjct: 1    MAVQACVKEKMMDEIDEDDEPLVFKRSNATSKHNQLNSDTKKSSQRYDGQSGRQVSDVPS 60

Query: 223  PNGQNXXXXXXXXXXXXXXXXXXXIGNLKESTSIADXXXXXXXXXXXXNDAGXXXXXXXX 402
             NGQ+                   I + K STS A             +D          
Sbjct: 61   TNGQSSSASKGKTTKLSSMKSP--IASPKASTSFAKASPVANPKVSSSSDDRSKHSSKQN 118

Query: 403  XXXXVDSE------------DSDDDKPLSYRLPIASTTLPKSNSPRVSKGLXXXXXXXXX 546
                V  E            DS+D+KPLS RL    T L K +S   +KGL         
Sbjct: 119  TINVVKEEKELVNPAAEPYGDSEDEKPLSARL---FTGLTKGSSNNANKGLINSSPASLP 175

Query: 547  XEKAKVNXXXXXXXXXXXXXXXXRFKLKSCGPSSVKKYDSDEEKPLASKILQNGSNKRDS 726
              K ++N                R K  + G S+VK Y+SD+ K L S   QNGS  R S
Sbjct: 176  VPKPEINRYSDDSDDEIPLSSKFRLKANA-GTSTVKSYESDDNKTLVSNFQQNGSINRGS 234

Query: 727  ELVKSHKVLNKRPLSDVSTSVQSAVKKPKLSDAXXXXXXXXXXXXAESKTDD-DDDYVPI 903
               KS   +NKRPL +V +SVQS+VKKPKLSDA            AE K DD DDD+VPI
Sbjct: 235  ---KSSIKVNKRPLGEVKSSVQSSVKKPKLSDASTPVNNKQASKKAEPKADDSDDDHVPI 291

Query: 904  GQRMKKLTVPDNKSQSAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTKVPPG 1083
             QRMKK     NKS +A                                     +KVPP 
Sbjct: 292  SQRMKKSATSGNKSSTAKQKVTKVVSSSMKKASKKFKKVVKKSKYSKS------SKVPPS 345

Query: 1084 SGEGQKWTTLVHSGVIFPPPYKPHGVKMLYNGQPVQLTPEQEEVATMFAVMKDTDYATKP 1263
            SGEG+KW TLVH+GVIFPPPYKPHGVKMLY G+PV LTPEQEEVATMFAVM DTDY TK 
Sbjct: 346  SGEGKKWNTLVHNGVIFPPPYKPHGVKMLYKGKPVDLTPEQEEVATMFAVMLDTDYMTKS 405

Query: 1264 KFIENFMTDWRPILGKNHVIKKFELCDFTPIYEWHQ 1371
            KF ENFM DWR ILGKNHVI+  E CDFTPIYEWHQ
Sbjct: 406  KFKENFMDDWRKILGKNHVIQNLEDCDFTPIYEWHQ 441


>ref|XP_007020664.1| DNA topoisomerase I alpha isoform 1 [Theobroma cacao]
            gi|590606147|ref|XP_007020665.1| DNA topoisomerase I
            alpha isoform 1 [Theobroma cacao]
            gi|508720292|gb|EOY12189.1| DNA topoisomerase I alpha
            isoform 1 [Theobroma cacao] gi|508720293|gb|EOY12190.1|
            DNA topoisomerase I alpha isoform 1 [Theobroma cacao]
          Length = 904

 Score =  768 bits (1984), Expect(2) = 0.0
 Identities = 372/425 (87%), Positives = 400/425 (94%)
 Frame = +2

Query: 1382 MWAIVDGVKEKVGNFRVEPPGLFRGRGEHPKMGKLKRRIRPRDITINIGKDAPIPECPIP 1561
            MWAIVDGVKEKVGNFRVEPPGLFRGRGEHPKMGKLKRRIRP DITINIGKDAPIPECPIP
Sbjct: 480  MWAIVDGVKEKVGNFRVEPPGLFRGRGEHPKMGKLKRRIRPSDITINIGKDAPIPECPIP 539

Query: 1562 GERWKEVKHDNTVTWLAFWNDPINPKEFKYVFLAASSSLKGQSDKEKYEKARLLKDYIHN 1741
            GERWK++KHDNTVTWLAFWNDPINPKEFKYVFLAASSSLKGQSDKEKYEKAR+LKDYI N
Sbjct: 540  GERWKDIKHDNTVTWLAFWNDPINPKEFKYVFLAASSSLKGQSDKEKYEKARMLKDYIKN 599

Query: 1742 IRANYTKDFVSKDISKRQIAVATYLIDKLALRAGNEKDDDEADTVGCCTLKVENVSLVPP 1921
            IRA YTKDF +KD+ KRQIAVATYLIDKLALRAGNEKDDDEADTVGCCTLKV NV  +PP
Sbjct: 600  IRAAYTKDFTTKDVMKRQIAVATYLIDKLALRAGNEKDDDEADTVGCCTLKVGNVECIPP 659

Query: 1922 NQLQFDFLGKDSIRYFNTVEVELPVYKAIGLFKSGKKDGEDLFDKLDTNKLNAHLKELMP 2101
            N+L+FDFLGKDSI+Y NTVEVELPVYKAIG F++GK   +DLFDKLDT+KLNAHLKELMP
Sbjct: 660  NKLKFDFLGKDSIQYVNTVEVELPVYKAIGQFQTGKSKSDDLFDKLDTSKLNAHLKELMP 719

Query: 2102 GLTAKVFRTYNASITLDGMLSNETKAGDVAEKIVIYQHANKEVAIICNHQRSVSKSHTAQ 2281
            GLTAKVFRTYNASITLD ML+ ETK GDVAEK+V+YQ ANKEVAIICNHQRS+SKSH+AQ
Sbjct: 720  GLTAKVFRTYNASITLDEMLNKETKDGDVAEKVVVYQRANKEVAIICNHQRSISKSHSAQ 779

Query: 2282 MSRLSEKMDELKAVMDELKTDLTRAKKGKPPLKDADGKQKKNLAPEALERKIAQTNAKIE 2461
            MSRL+EK+ ELK V+ ELK DL RAKKGKPPLKDADGKQK+NL P+A+++KI QTNAKIE
Sbjct: 780  MSRLTEKITELKGVLKELKIDLDRAKKGKPPLKDADGKQKRNLTPQAIQKKIDQTNAKIE 839

Query: 2462 KMERDMRTKEDLKTVALGTSKINYLDPRISVAWCKRHEVPIEKIFNKSLLAKFAWAMDVD 2641
            KMERDM+TKEDLKTVALGTSKINYLDPRI+VAWCKRHEVPIEKIFNKSLLAKFAWAMDVD
Sbjct: 840  KMERDMQTKEDLKTVALGTSKINYLDPRITVAWCKRHEVPIEKIFNKSLLAKFAWAMDVD 899

Query: 2642 PSFRF 2656
            P FRF
Sbjct: 900  PDFRF 904



 Score =  266 bits (679), Expect(2) = 0.0
 Identities = 184/466 (39%), Positives = 220/466 (47%), Gaps = 24/466 (5%)
 Frame = +1

Query: 43   MAVDTCVKPKFFXXXXXXXEPIVFKRNKTIS-KQNQLNSEIKKPSSQ-NDGLSGRHPRDA 216
            MAV+   K  +         P+VFKRN T S KQNQLNSE+KK SSQ +DG SGR   D 
Sbjct: 1    MAVEAPAKHVYDFDDDDDDGPVVFKRNNTSSSKQNQLNSEVKKASSQRSDGQSGRQVSDV 60

Query: 217  VSPNGQNXXXXXXXXXXXXXXXXXXX--------------------IGNLKESTSIADXX 336
             SPNGQ+                                       + N K STS+ D  
Sbjct: 61   RSPNGQSSNAPKNKSISSSKSPPVKSPILSPKASTSSTKALPVKSPVVNFKASTSLNDQS 120

Query: 337  XXXXXXXXXXNDAGXXXXXXXXXXXXVDSEDSDDDKPLSYRLPIASTTLPKSNSPRVSKG 516
                                       D +D DD  PLS RL        K  S + +KG
Sbjct: 121  KQALKQNMTTAVKEGRSPIKGTTEPNSDDDDDDDSLPLSARL--------KGISNQGNKG 172

Query: 517  LXXXXXXXXXXEKAKVNXXXXXXXXXXXXXXXXRFKLKS-CGPSSVKKYDSDEEKPLASK 693
                          K                  RF +KS  G SS + +D DE+KPLASK
Sbjct: 173  ASTSAPAQSRRLVPKTEVKVSAEDPDDEAPLSARFNVKSNTGTSSSRLHDCDEKKPLASK 232

Query: 694  ILQNGSNKRDSELVKSHKVLNKRPLSDVSTSVQSAVKKPKLSDAXXXXXXXXXXXXAESK 873
            I QNGS  +  +   S  +  KRPL   ++S  S+ KKPK SDA            AE K
Sbjct: 233  IQQNGSIMKGKQQ-NSSTLSGKRPLDKGNSSDHSSAKKPKTSDAPTTMKTKQVTVKAE-K 290

Query: 874  TDDDDDYVPIGQRMKKLTVPDNKSQSAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 1053
             D+DDD++PI QRMKK T  ++K  S                                  
Sbjct: 291  ADEDDDHMPIAQRMKKSTASNSKLSSMKQKTTKVVSSSFKKINKKSKKEMKSSKYIKS-- 348

Query: 1054 XXXXTKVPPGSGEGQK-WTTLVHSGVIFPPPYKPHGVKMLYNGQPVQLTPEQEEVATMFA 1230
                TKVPP SG+GQK W+TLVH+GVIFP PY PHGVKMLY+G+PV LTPEQEEVATMFA
Sbjct: 349  ----TKVPPSSGDGQKKWSTLVHNGVIFPSPYTPHGVKMLYDGRPVDLTPEQEEVATMFA 404

Query: 1231 VMKDTDYATKPKFIENFMTDWRPILGKNHVIKKFELCDFTPIYEWH 1368
            VMKDTDY +K +F +NF  DW  +LGKNH IK  + CDFTPIYEWH
Sbjct: 405  VMKDTDYMSKTQFKKNFWEDWSKLLGKNHTIKDLDRCDFTPIYEWH 450


>emb|CBI28783.3| unnamed protein product [Vitis vinifera]
          Length = 724

 Score =  779 bits (2012), Expect(2) = 0.0
 Identities = 380/425 (89%), Positives = 399/425 (93%)
 Frame = +2

Query: 1382 MWAIVDGVKEKVGNFRVEPPGLFRGRGEHPKMGKLKRRIRPRDITINIGKDAPIPECPIP 1561
            MWA+VDGVKEKVGNFRVEPPGLFRGRGEHPKMGKLK+RI P DITINIGK+AP+PECPIP
Sbjct: 300  MWAVVDGVKEKVGNFRVEPPGLFRGRGEHPKMGKLKKRICPSDITINIGKEAPVPECPIP 359

Query: 1562 GERWKEVKHDNTVTWLAFWNDPINPKEFKYVFLAASSSLKGQSDKEKYEKARLLKDYIHN 1741
            GERWKEV+HDNTVTWLAFWNDPINPKEFKYVFLAASSSLKGQSDKEKYEKARLLKDYI N
Sbjct: 360  GERWKEVRHDNTVTWLAFWNDPINPKEFKYVFLAASSSLKGQSDKEKYEKARLLKDYIQN 419

Query: 1742 IRANYTKDFVSKDISKRQIAVATYLIDKLALRAGNEKDDDEADTVGCCTLKVENVSLVPP 1921
            IRA YTKDF +KD  KRQIAVATYLIDKLALRAGNEKDDDEADTVGCCTLKVENV+LVPP
Sbjct: 420  IRATYTKDFTNKDTMKRQIAVATYLIDKLALRAGNEKDDDEADTVGCCTLKVENVALVPP 479

Query: 1922 NQLQFDFLGKDSIRYFNTVEVELPVYKAIGLFKSGKKDGEDLFDKLDTNKLNAHLKELMP 2101
            N+L+FDFLGKDSIRYFNTVEVELPVYKAIG FK+GK  G+DLFDKLDT+KLNAHLKELMP
Sbjct: 480  NKLEFDFLGKDSIRYFNTVEVELPVYKAIGQFKTGKSGGDDLFDKLDTSKLNAHLKELMP 539

Query: 2102 GLTAKVFRTYNASITLDGMLSNETKAGDVAEKIVIYQHANKEVAIICNHQRSVSKSHTAQ 2281
            GLTAKVFRTYNASITLD ML+ E + GD  EKIVIYQHANKEVAIICNHQRSVSKSH  Q
Sbjct: 540  GLTAKVFRTYNASITLDEMLNREARGGDAMEKIVIYQHANKEVAIICNHQRSVSKSHDVQ 599

Query: 2282 MSRLSEKMDELKAVMDELKTDLTRAKKGKPPLKDADGKQKKNLAPEALERKIAQTNAKIE 2461
            MSRLSEKM EL+ V+DELKTDL RAKKGKPPLKD+DGK KKN+ PE LERKIAQTN KIE
Sbjct: 600  MSRLSEKMRELQGVLDELKTDLARAKKGKPPLKDSDGKPKKNMTPEVLERKIAQTNTKIE 659

Query: 2462 KMERDMRTKEDLKTVALGTSKINYLDPRISVAWCKRHEVPIEKIFNKSLLAKFAWAMDVD 2641
            KMERDM+TKEDLKTVALGTSKINYLDPRISVAWCKR EVPIEKIFNKSLLAKFAWAMDVD
Sbjct: 660  KMERDMKTKEDLKTVALGTSKINYLDPRISVAWCKRQEVPIEKIFNKSLLAKFAWAMDVD 719

Query: 2642 PSFRF 2656
            PSFRF
Sbjct: 720  PSFRF 724



 Score =  222 bits (565), Expect(2) = 0.0
 Identities = 145/319 (45%), Positives = 174/319 (54%), Gaps = 1/319 (0%)
 Frame = +1

Query: 418  DSEDSDDDKPLSYRLPIASTTLPKSNSPRVSKGLXXXXXXXXXXEKAKVNXXXXXXXXXX 597
            +SEDS+DDKPLS +L   S  LPK NS  V KGL          +K KV+          
Sbjct: 15   ESEDSEDDKPLSAKL---SARLPKGNS-HVLKGLSSPVLQS---QKTKVDSSD------- 60

Query: 598  XXXXXXRFKLKSCGPSSVKKYDSDEEKPLASKILQNGSNKRDSELVKSHKVLNKRPLSDV 777
                                 DS++E PL  K LQ  S K  S    S K+L+ + LS  
Sbjct: 61   ---------------------DSEDEIPLLLK-LQLKSRKGAS----SSKLLDSKGLSSP 94

Query: 778  STSVQSAVKKPKLSDAXXXXXXXXXXXXAESKTDDDDDYVPIGQRMKKLTVP-DNKSQSA 954
            ++S   + +K K+++              ++ +DD +D +P+  + +  TV  DNK  S 
Sbjct: 95   ASSRPQS-QKAKVNN--------------KNLSDDSEDEIPLSSKFRLKTVSSDNKKASK 139

Query: 955  XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTKVPPGSGEGQKWTTLVHSGVIF 1134
                                                 TKVPP SGEGQKWTTL H+GVIF
Sbjct: 140  TKVIPSSRKKATKKAKKSKKLAKSSKYSKS-------TKVPPNSGEGQKWTTLEHNGVIF 192

Query: 1135 PPPYKPHGVKMLYNGQPVQLTPEQEEVATMFAVMKDTDYATKPKFIENFMTDWRPILGKN 1314
            PPPYKPHGVKMLYNG+PV LTPEQEEVATMFAVMKDTDYATKP+FIENFM DWR  LGKN
Sbjct: 193  PPPYKPHGVKMLYNGRPVDLTPEQEEVATMFAVMKDTDYATKPRFIENFMNDWRVRLGKN 252

Query: 1315 HVIKKFELCDFTPIYEWHQ 1371
            HVIKKFELCDFTPIYEWH+
Sbjct: 253  HVIKKFELCDFTPIYEWHE 271


>ref|XP_006474977.1| PREDICTED: DNA topoisomerase 1-like isoform X1 [Citrus sinensis]
            gi|568842074|ref|XP_006474978.1| PREDICTED: DNA
            topoisomerase 1-like isoform X2 [Citrus sinensis]
            gi|568842076|ref|XP_006474979.1| PREDICTED: DNA
            topoisomerase 1-like isoform X3 [Citrus sinensis]
            gi|568842078|ref|XP_006474980.1| PREDICTED: DNA
            topoisomerase 1-like isoform X4 [Citrus sinensis]
          Length = 902

 Score =  752 bits (1941), Expect(2) = 0.0
 Identities = 368/426 (86%), Positives = 399/426 (93%), Gaps = 1/426 (0%)
 Frame = +2

Query: 1382 MWAIVDGVKEKVGNFRVEPPGLFRGRGEHPKMGKLKRRIRPRDITINIGKDAPIPECPIP 1561
            MWAIVDGVKEKVGNFRVEPPGLFRGRGEHPKMGKLK+RI+P DITINIGKD PIPECPIP
Sbjct: 477  MWAIVDGVKEKVGNFRVEPPGLFRGRGEHPKMGKLKKRIQPSDITINIGKDVPIPECPIP 536

Query: 1562 GERWKEVKHDNTVTWLAFWNDPINPKEFKYVFLAASSSLKGQSDKEKYEKARLLKDYIHN 1741
            GE WKEVKHDNTVTWLAFWNDPINPKEFKYVFLAASSSLKGQSDKEKYEKAR LKDYIH+
Sbjct: 537  GESWKEVKHDNTVTWLAFWNDPINPKEFKYVFLAASSSLKGQSDKEKYEKARKLKDYIHS 596

Query: 1742 IRANYTKDFVSKDISKRQIAVATYLIDKLALRAGNEKDDDEADTVGCCTLKVENVSLVPP 1921
            IRA YTKDFVS+D ++RQIAVATYLIDKLALRAGNEKDDDEADTVGCCTLKV NV  +PP
Sbjct: 597  IRAAYTKDFVSRDGTRRQIAVATYLIDKLALRAGNEKDDDEADTVGCCTLKVGNVECIPP 656

Query: 1922 NQLQFDFLGKDSIRYFNTVEVELPVYKAIGLFKSGKKDGEDLFDKLDTNKLNAHLKELMP 2101
            N+L+FDFLGKDSI+Y NTVEVELPVYKAIG F++GKK  +DLFDKLDT KLNAHLKELMP
Sbjct: 657  NKLKFDFLGKDSIQYVNTVEVELPVYKAIGQFQTGKKQNDDLFDKLDTAKLNAHLKELMP 716

Query: 2102 GLTAKVFRTYNASITLDGMLSNETKAGDVAEKIVIYQHANKEVAIICNHQRSVSKSHTAQ 2281
            GLTAKVFRTYNASITLDGML+  T  GDVA KI +YQ ANKEVAIICNHQR+VSK+H+AQ
Sbjct: 717  GLTAKVFRTYNASITLDGMLNKGTGDGDVAVKIDVYQRANKEVAIICNHQRTVSKTHSAQ 776

Query: 2282 MSRLSEKMDELKAVMDELKTDLTRAKKGKPPL-KDADGKQKKNLAPEALERKIAQTNAKI 2458
            MSRL+EK+++LK V+ +L+ DL RAKKGKPPL KD+DGK+K+NLAPEALERK+AQTNAKI
Sbjct: 777  MSRLTEKIEDLKGVLKDLRVDLDRAKKGKPPLMKDSDGKRKRNLAPEALERKMAQTNAKI 836

Query: 2459 EKMERDMRTKEDLKTVALGTSKINYLDPRISVAWCKRHEVPIEKIFNKSLLAKFAWAMDV 2638
            EKMERDM+TKEDLKTVALGTSKINYLDPRI+VAWCKRHEVPIEKIFNKSLLAKFAWAMDV
Sbjct: 837  EKMERDMKTKEDLKTVALGTSKINYLDPRITVAWCKRHEVPIEKIFNKSLLAKFAWAMDV 896

Query: 2639 DPSFRF 2656
            DP FRF
Sbjct: 897  DPEFRF 902



 Score =  248 bits (634), Expect(2) = 0.0
 Identities = 148/319 (46%), Positives = 171/319 (53%), Gaps = 1/319 (0%)
 Frame = +1

Query: 418  DSEDSDDDKPLSYRLPIASTTLPKSNSPRVSKGLXXXXXXXXXXEKAKVNXXXXXXXXXX 597
            D  DS+DDKPLS RL        K NS  V++G+          E   VN          
Sbjct: 149  DDNDSEDDKPLSARL--------KGNSKNVNQGIGASKADAAISE---VNVKTDPEDSDD 197

Query: 598  XXXXXXRFKLKSCGPSSVKKYDSDEEKPLASKILQNGSNKRDSELVKSHKVLNKRPLSDV 777
                  RF   + G S  K  DSDE+KPLASK+ QNGS  R+++  KS  V  KRPL   
Sbjct: 198  EVPLSSRFPKSNAGTSGAKPIDSDEKKPLASKVQQNGSTSRETQQ-KSSSVPVKRPLQKA 256

Query: 778  STSVQSAVKKPKLSDAXXXXXXXXXXXXAESKTDDDDDYVPIGQRMKKLTVPDNKSQSAX 957
            S+S  S+ KKPK+SD              E K DDDD ++PI QRMK      N + S  
Sbjct: 257  SSSGASSAKKPKVSDTSKEVKVKQVTVKVEKKADDDD-HIPISQRMK------NSAPSVK 309

Query: 958  XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTKVPPGSGEGQK-WTTLVHSGVIF 1134
                                                TK+ PGSG+GQK WTTLVH+GVIF
Sbjct: 310  KSVTNTAKATKSVSSSSNKINKKTKKVIKNSQYSKSTKMLPGSGDGQKKWTTLVHNGVIF 369

Query: 1135 PPPYKPHGVKMLYNGQPVQLTPEQEEVATMFAVMKDTDYATKPKFIENFMTDWRPILGKN 1314
            PPPY PHGVKMLY G+ V LTPEQEEVATMFAVM DTDY  KPKF ENF  DWR +LGKN
Sbjct: 370  PPPYLPHGVKMLYKGKEVNLTPEQEEVATMFAVMLDTDYMQKPKFRENFWNDWRKLLGKN 429

Query: 1315 HVIKKFELCDFTPIYEWHQ 1371
            HVI+  E CDF PIY+WHQ
Sbjct: 430  HVIQNLEGCDFKPIYDWHQ 448


>ref|XP_006452479.1| hypothetical protein CICLE_v10007398mg [Citrus clementina]
            gi|567920950|ref|XP_006452481.1| hypothetical protein
            CICLE_v10007398mg [Citrus clementina]
            gi|557555705|gb|ESR65719.1| hypothetical protein
            CICLE_v10007398mg [Citrus clementina]
            gi|557555707|gb|ESR65721.1| hypothetical protein
            CICLE_v10007398mg [Citrus clementina]
          Length = 902

 Score =  751 bits (1938), Expect(2) = 0.0
 Identities = 367/426 (86%), Positives = 399/426 (93%), Gaps = 1/426 (0%)
 Frame = +2

Query: 1382 MWAIVDGVKEKVGNFRVEPPGLFRGRGEHPKMGKLKRRIRPRDITINIGKDAPIPECPIP 1561
            MWAIVDGVKEKVGNFRVEPPGLFRGRGEHPKMGKLK+RI+P DITINIGKD PIPECPIP
Sbjct: 477  MWAIVDGVKEKVGNFRVEPPGLFRGRGEHPKMGKLKKRIQPSDITINIGKDVPIPECPIP 536

Query: 1562 GERWKEVKHDNTVTWLAFWNDPINPKEFKYVFLAASSSLKGQSDKEKYEKARLLKDYIHN 1741
            GE WKEVKHDNTVTWLAFWNDPINPKEFKYVFLAASSSLKGQSD+EKYEKAR LKDYIH+
Sbjct: 537  GESWKEVKHDNTVTWLAFWNDPINPKEFKYVFLAASSSLKGQSDREKYEKARKLKDYIHS 596

Query: 1742 IRANYTKDFVSKDISKRQIAVATYLIDKLALRAGNEKDDDEADTVGCCTLKVENVSLVPP 1921
            IRA YTKDFVS+D ++RQIAVATYLIDKLALRAGNEKDDDEADTVGCCTLKV NV  +PP
Sbjct: 597  IRAAYTKDFVSRDGTRRQIAVATYLIDKLALRAGNEKDDDEADTVGCCTLKVGNVECIPP 656

Query: 1922 NQLQFDFLGKDSIRYFNTVEVELPVYKAIGLFKSGKKDGEDLFDKLDTNKLNAHLKELMP 2101
            N+L+FDFLGKDSI+Y NTVEVELPVYKAIG F++GKK  +DLFDKLDT KLNAHLKELMP
Sbjct: 657  NKLKFDFLGKDSIQYVNTVEVELPVYKAIGQFQTGKKQNDDLFDKLDTAKLNAHLKELMP 716

Query: 2102 GLTAKVFRTYNASITLDGMLSNETKAGDVAEKIVIYQHANKEVAIICNHQRSVSKSHTAQ 2281
            GLTAKVFRTYNASITLDGML+  T  GDVA KI +YQ ANKEVAIICNHQR+VSK+H+AQ
Sbjct: 717  GLTAKVFRTYNASITLDGMLNKGTGDGDVAVKIDVYQRANKEVAIICNHQRTVSKTHSAQ 776

Query: 2282 MSRLSEKMDELKAVMDELKTDLTRAKKGKPPL-KDADGKQKKNLAPEALERKIAQTNAKI 2458
            MSRL+EK+++LK V+ +L+ DL RAKKGKPPL KD+DGK+K+NLAPEALERK+AQTNAKI
Sbjct: 777  MSRLTEKIEDLKGVLKDLRVDLDRAKKGKPPLMKDSDGKRKRNLAPEALERKMAQTNAKI 836

Query: 2459 EKMERDMRTKEDLKTVALGTSKINYLDPRISVAWCKRHEVPIEKIFNKSLLAKFAWAMDV 2638
            EKMERDM+TKEDLKTVALGTSKINYLDPRI+VAWCKRHEVPIEKIFNKSLLAKFAWAMDV
Sbjct: 837  EKMERDMKTKEDLKTVALGTSKINYLDPRITVAWCKRHEVPIEKIFNKSLLAKFAWAMDV 896

Query: 2639 DPSFRF 2656
            DP FRF
Sbjct: 897  DPEFRF 902



 Score =  247 bits (631), Expect(2) = 0.0
 Identities = 147/319 (46%), Positives = 171/319 (53%), Gaps = 1/319 (0%)
 Frame = +1

Query: 418  DSEDSDDDKPLSYRLPIASTTLPKSNSPRVSKGLXXXXXXXXXXEKAKVNXXXXXXXXXX 597
            D  DS+DDKPLS RL        K N+  V++G+          E   VN          
Sbjct: 149  DDNDSEDDKPLSARL--------KGNTKNVNQGIGASKADAAISE---VNVKTDPEDSDD 197

Query: 598  XXXXXXRFKLKSCGPSSVKKYDSDEEKPLASKILQNGSNKRDSELVKSHKVLNKRPLSDV 777
                  RF   + G S  K  DSDE+KPLASK+ QNGS  R+++  KS  V  KRPL   
Sbjct: 198  EVPLSSRFPKSNAGTSGAKPIDSDEKKPLASKVQQNGSTSRETQQ-KSSSVPVKRPLQKA 256

Query: 778  STSVQSAVKKPKLSDAXXXXXXXXXXXXAESKTDDDDDYVPIGQRMKKLTVPDNKSQSAX 957
            S+S  S+ KKPK+SD              E K DDDD ++PI QRMK      N + S  
Sbjct: 257  SSSGASSAKKPKVSDTSKEVKVKQVTVKVEKKADDDD-HIPISQRMK------NSAPSVK 309

Query: 958  XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTKVPPGSGEGQK-WTTLVHSGVIF 1134
                                                TK+ PGSG+GQK WTTLVH+GVIF
Sbjct: 310  KSVTNTAKATKSVSSSSKKINKKTKKVIKNSQYSKSTKMLPGSGDGQKKWTTLVHNGVIF 369

Query: 1135 PPPYKPHGVKMLYNGQPVQLTPEQEEVATMFAVMKDTDYATKPKFIENFMTDWRPILGKN 1314
            PPPY PHGVKMLY G+ V LTPEQEEVATMFAVM DTDY  KPKF ENF  DWR +LGKN
Sbjct: 370  PPPYLPHGVKMLYKGKEVNLTPEQEEVATMFAVMLDTDYMQKPKFRENFWNDWRKLLGKN 429

Query: 1315 HVIKKFELCDFTPIYEWHQ 1371
            HVI+  E CDF PIY+WHQ
Sbjct: 430  HVIQNLEGCDFKPIYDWHQ 448


>dbj|BAG31377.1| topoisomerase I [Catharanthus roseus]
          Length = 910

 Score =  740 bits (1911), Expect(2) = 0.0
 Identities = 366/427 (85%), Positives = 393/427 (92%), Gaps = 2/427 (0%)
 Frame = +2

Query: 1382 MWAIVDGVKEKVGNFRVEPPGLFRGRGEHPKMGKLKRRIRPRDITINIGKDAPIPECPIP 1561
            MWA VDG KEKVGNFRVEPPGLFRGRGEHPKMGKLK+RIRP DITINIGKDAPIPECP+P
Sbjct: 484  MWAWVDGKKEKVGNFRVEPPGLFRGRGEHPKMGKLKKRIRPCDITINIGKDAPIPECPVP 543

Query: 1562 GERWKEVKHDNTVTWLAFWNDPINPKEFKYVFLAASSSLKGQSDKEKYEKARLLKDYIHN 1741
            GERWKEV+HDNTVTWLAFWNDPINPKEFKYVFLAASS+LKG SDKEKYEKARLLKDYI  
Sbjct: 544  GERWKEVRHDNTVTWLAFWNDPINPKEFKYVFLAASSTLKGLSDKEKYEKARLLKDYIQG 603

Query: 1742 IRANYTKDFVSKDISKRQIAVATYLIDKLALRAGNEKDDDEADTVGCCTLKVENVSLVPP 1921
            IRA YTKDF SKD +K+QIAVATYLIDKLALRAGNEKDDDEADTVGCCTLKVENV  VPP
Sbjct: 604  IRAAYTKDFASKDPTKKQIAVATYLIDKLALRAGNEKDDDEADTVGCCTLKVENVEPVPP 663

Query: 1922 NQLQFDFLGKDSIRYFNTVEVELPVYKAIGLFKSGKKDGEDLFDKLDTNKLNAHLKELMP 2101
            N L+FDFLGKDSIRY N VEVE  V+KAI  F+SGK+   DLFD LDT+KLNAHLKELMP
Sbjct: 664  NILKFDFLGKDSIRYQNEVEVEAAVFKAIQQFRSGKEGSSDLFDLLDTSKLNAHLKELMP 723

Query: 2102 GLTAKVFRTYNASITLDGMLSNETKAGDVAEKIVIYQHANKEVAIICNHQRSVSKSHTAQ 2281
            GLTAKVFRTYNASITLD MLS ETK GDVAEK+V+YQHANKEVAIICNHQR+VSKSH+AQ
Sbjct: 724  GLTAKVFRTYNASITLDDMLSRETKGGDVAEKVVVYQHANKEVAIICNHQRTVSKSHSAQ 783

Query: 2282 MSRLSEKMDELKAVMDELKTDLTRAKKGKPPL--KDADGKQKKNLAPEALERKIAQTNAK 2455
            M RL+EK++ELKAV++ELK+DL+R KKGKPPL  K+ADGK K+NL PE+LE+KIAQTNAK
Sbjct: 784  MLRLNEKIEELKAVVEELKSDLSRVKKGKPPLKSKNADGKPKRNLNPESLEKKIAQTNAK 843

Query: 2456 IEKMERDMRTKEDLKTVALGTSKINYLDPRISVAWCKRHEVPIEKIFNKSLLAKFAWAMD 2635
            IEKMERD  TKEDLKTVALGTSKINYLDPRI+VAWCKRHEVPIEKIFNKSLLAKF WAMD
Sbjct: 844  IEKMERDKETKEDLKTVALGTSKINYLDPRITVAWCKRHEVPIEKIFNKSLLAKFTWAMD 903

Query: 2636 VDPSFRF 2656
            VDPSFRF
Sbjct: 904  VDPSFRF 910



 Score =  256 bits (655), Expect(2) = 0.0
 Identities = 150/320 (46%), Positives = 178/320 (55%), Gaps = 2/320 (0%)
 Frame = +1

Query: 418  DSEDSDDDKPLSYRLPIASTTLPKSNSPRVSKGLXXXXXXXXXXEKAKVNXXXXXXXXXX 597
            DSEDSDD KPLS R   +S+   K N+ +VSK            EK   +          
Sbjct: 162  DSEDSDDGKPLSLRHSASSS---KGNTNQVSKEGSKPENEDSDDEKPLSS---------- 208

Query: 598  XXXXXXRFKLKS-CGPSSVKKYDSDEEKPLASKILQNGSNKRDSELVKSHKVLNKRPLSD 774
                  RF LKS  G S+ K YDSD++KPLA K+  NGS  RD +  K   + NKRP  D
Sbjct: 209  ------RFPLKSGVGESTSKAYDSDDDKPLAKKLQHNGSAMRDGQPNKYSNMSNKRPPGD 262

Query: 775  VSTSVQSAVKKPKLSDAXXXXXXXXXXXXAESKT-DDDDDYVPIGQRMKKLTVPDNKSQS 951
            + +S Q +VKKPKLS               E K  DDDDD++PI QR+KK    ++KS S
Sbjct: 263  IKSSNQLSVKKPKLSSVTAPTNKKQASVKPEPKAEDDDDDHLPISQRIKKSPTSESKSSS 322

Query: 952  AXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTKVPPGSGEGQKWTTLVHSGVI 1131
                                                  +KVPP SGEG+KW  L H+GVI
Sbjct: 323  IKKTTKVVSSSVKKVNKKSKKVMKNSKYSKS-------SKVPPSSGEGKKWNKLEHNGVI 375

Query: 1132 FPPPYKPHGVKMLYNGQPVQLTPEQEEVATMFAVMKDTDYATKPKFIENFMTDWRPILGK 1311
            FPPPYKPHG+KMLY G+PV LTPEQEEVATMFAVM DTDY  KP+F ENF  DW+ ILGK
Sbjct: 376  FPPPYKPHGIKMLYKGKPVDLTPEQEEVATMFAVMLDTDYMNKPRFKENFFGDWKKILGK 435

Query: 1312 NHVIKKFELCDFTPIYEWHQ 1371
            NHVI+  E CDF+PIYEWHQ
Sbjct: 436  NHVIQNLENCDFSPIYEWHQ 455


>ref|XP_004149585.1| PREDICTED: DNA topoisomerase 1-like [Cucumis sativus]
            gi|449503189|ref|XP_004161878.1| PREDICTED: DNA
            topoisomerase 1-like [Cucumis sativus]
          Length = 889

 Score =  742 bits (1915), Expect(2) = 0.0
 Identities = 364/425 (85%), Positives = 393/425 (92%)
 Frame = +2

Query: 1382 MWAIVDGVKEKVGNFRVEPPGLFRGRGEHPKMGKLKRRIRPRDITINIGKDAPIPECPIP 1561
            MWAI+DGVKEKVGNFRVEPPGLFRGRGEHPKMGKLKRRI P DITINIGK APIPECPIP
Sbjct: 465  MWAILDGVKEKVGNFRVEPPGLFRGRGEHPKMGKLKRRICPSDITINIGKGAPIPECPIP 524

Query: 1562 GERWKEVKHDNTVTWLAFWNDPINPKEFKYVFLAASSSLKGQSDKEKYEKARLLKDYIHN 1741
            GERWKEV+HDNTVTWLAFWNDPIN KEFKYVFLAASSSLKGQSDKEKYEKAR+LKDYI N
Sbjct: 525  GERWKEVRHDNTVTWLAFWNDPINQKEFKYVFLAASSSLKGQSDKEKYEKARMLKDYIKN 584

Query: 1742 IRANYTKDFVSKDISKRQIAVATYLIDKLALRAGNEKDDDEADTVGCCTLKVENVSLVPP 1921
            IR  YTKDF SKD ++RQIAVATYLIDKLALRAGNEKDDDEADTVGCCTLKVENV  VPP
Sbjct: 585  IRNAYTKDFTSKDPTRRQIAVATYLIDKLALRAGNEKDDDEADTVGCCTLKVENVKAVPP 644

Query: 1922 NQLQFDFLGKDSIRYFNTVEVELPVYKAIGLFKSGKKDGEDLFDKLDTNKLNAHLKELMP 2101
            N L+F+FLGKDSIRY NTVEVELPV+KAI  F+SGK   +DLFDKLDT+KLNAHLK+LMP
Sbjct: 645  NLLEFNFLGKDSIRYENTVEVELPVFKAITQFQSGKSGTDDLFDKLDTSKLNAHLKDLMP 704

Query: 2102 GLTAKVFRTYNASITLDGMLSNETKAGDVAEKIVIYQHANKEVAIICNHQRSVSKSHTAQ 2281
            GLTAKVFRTYNASITLD ML+  TK G+V+EKIV YQHANKEVAIICNHQR+VSKSH AQ
Sbjct: 705  GLTAKVFRTYNASITLDDMLNRGTKNGEVSEKIVTYQHANKEVAIICNHQRTVSKSHGAQ 764

Query: 2282 MSRLSEKMDELKAVMDELKTDLTRAKKGKPPLKDADGKQKKNLAPEALERKIAQTNAKIE 2461
            M+RL+EK+ EL+ ++ ELK DL RAKKGKPPLK +DGKQK+NL PEALE+KI+QTNAKIE
Sbjct: 765  MTRLNEKISELRDILKELKIDLDRAKKGKPPLKGSDGKQKRNLTPEALEKKISQTNAKIE 824

Query: 2462 KMERDMRTKEDLKTVALGTSKINYLDPRISVAWCKRHEVPIEKIFNKSLLAKFAWAMDVD 2641
            K+ERDM+TKEDLKTVALGTSKINYLDPRI+VAWCKRHEVPIEKIFNKSLLAKFAWAMDVD
Sbjct: 825  KIERDMKTKEDLKTVALGTSKINYLDPRITVAWCKRHEVPIEKIFNKSLLAKFAWAMDVD 884

Query: 2642 PSFRF 2656
            P FRF
Sbjct: 885  PDFRF 889



 Score =  251 bits (640), Expect(2) = 0.0
 Identities = 177/459 (38%), Positives = 217/459 (47%), Gaps = 16/459 (3%)
 Frame = +1

Query: 43   MAVDTCVKPKFFXXXXXXXEPIVFKRNKTISKQNQLNSEIKKPSSQN-DGLSGRHPRDAV 219
            MAV+T  K   F        PIVFKR    S+QNQL+SEIK   +Q    L GR   D  
Sbjct: 1    MAVETFGKAPMFDDDDEDNMPIVFKRTSA-SRQNQLDSEIKHSQAQRLSKLPGRQGSDLC 59

Query: 220  SPNGQNXXXXXXXXXXXXXXXXXXXIGNLKESTSIADXXXXXXXXXXXXNDAGXXXXXXX 399
            S NGQ+                   IG+ K S S                 +        
Sbjct: 60   STNGQSSNNQKRMTSLPKTSPMRSEIGSQKASRSSPIPEPLTKSLGTSLKASHSMDSRPK 119

Query: 400  XXXXXV------------DSEDSDDDKPLSYRLPIASTTLPKSNSPRVSKGLXXXXXXXX 543
                 V            ++ DS+DDKPLS RL        K N  + +KGL        
Sbjct: 120  SLVNAVVKEENVSINPSQENSDSEDDKPLSIRL--------KGNPNQPNKGLVSTVP--- 168

Query: 544  XXEKAKVNXXXXXXXXXXXXXXXXRFKLKSCGPSSVKKYDSDEEKPLASKILQNGSNKRD 723
               K KV                 + K  S G    K++  DE+KPL  K+ QNGS  RD
Sbjct: 169  ---KNKVKKSLADSDDEVPLSSKFQMKHAS-GVLGSKQHGFDEKKPLVPKVHQNGSTSRD 224

Query: 724  SELVKSHKVLNKRPL--SDVSTSVQSAVKKPKLSDAXXXXXXXXXXXXAESKTDDDDDYV 897
             +L K   + +KRPL   D  +  Q   KKPKL+D+            A+ + DDDDD +
Sbjct: 225  -KLQKPAVLSSKRPLPNEDSHSPSQFPTKKPKLTDSSSPLNSKLVSLKAKQEVDDDDDDI 283

Query: 898  PIGQRMKKLTVPDNKSQSAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTKVP 1077
            PI QRMKK++   NKS S+                                     TK+ 
Sbjct: 284  PISQRMKKVSATVNKSSSSKPTISKVVSSSIKKTFKKSKKPVKKSKYVKS------TKLL 337

Query: 1078 PGSGEGQK-WTTLVHSGVIFPPPYKPHGVKMLYNGQPVQLTPEQEEVATMFAVMKDTDYA 1254
            P +G+GQK WTTLVH+GVIFPPPY+ HGVKMLY G+PV LTP QEEVATMFAVMKDTDY 
Sbjct: 338  PSAGDGQKKWTTLVHNGVIFPPPYQTHGVKMLYKGKPVDLTPPQEEVATMFAVMKDTDYM 397

Query: 1255 TKPKFIENFMTDWRPILGKNHVIKKFELCDFTPIYEWHQ 1371
             KPKF ENF  DWR +LGKNHVI+  + CDFTPIY+W+Q
Sbjct: 398  LKPKFKENFWNDWRKLLGKNHVIQNLDDCDFTPIYDWYQ 436


>ref|XP_002300344.1| DNA topoisomerase family protein [Populus trichocarpa]
            gi|222847602|gb|EEE85149.1| DNA topoisomerase family
            protein [Populus trichocarpa]
          Length = 877

 Score =  748 bits (1931), Expect(2) = 0.0
 Identities = 367/425 (86%), Positives = 391/425 (92%)
 Frame = +2

Query: 1382 MWAIVDGVKEKVGNFRVEPPGLFRGRGEHPKMGKLKRRIRPRDITINIGKDAPIPECPIP 1561
            MWAIV+GVKEKVGNFRVEPPGLFRGRGEHPKMGKLK RIRP DITINIGKDAPIPECPIP
Sbjct: 453  MWAIVNGVKEKVGNFRVEPPGLFRGRGEHPKMGKLKSRIRPSDITINIGKDAPIPECPIP 512

Query: 1562 GERWKEVKHDNTVTWLAFWNDPINPKEFKYVFLAASSSLKGQSDKEKYEKARLLKDYIHN 1741
            GERWKEVKHDNTVTWLAFWNDPINPKEFKYVFLAASSSLKGQSDKEKYEKAR LKDYIHN
Sbjct: 513  GERWKEVKHDNTVTWLAFWNDPINPKEFKYVFLAASSSLKGQSDKEKYEKARKLKDYIHN 572

Query: 1742 IRANYTKDFVSKDISKRQIAVATYLIDKLALRAGNEKDDDEADTVGCCTLKVENVSLVPP 1921
            IRA YTKDF SKDI+KRQIAVATYLIDKLALRAGNEKDDDEADTVGCCTLKV NV  +PP
Sbjct: 573  IRAAYTKDFASKDITKRQIAVATYLIDKLALRAGNEKDDDEADTVGCCTLKVANVECIPP 632

Query: 1922 NQLQFDFLGKDSIRYFNTVEVELPVYKAIGLFKSGKKDGEDLFDKLDTNKLNAHLKELMP 2101
            N+L+FDFLGKDSIRY NTVEVELPVYKAIG F+  KK  +DLFD LDT+KLNAHLKELMP
Sbjct: 633  NKLKFDFLGKDSIRYENTVEVELPVYKAIGHFQVAKKQTDDLFDSLDTSKLNAHLKELMP 692

Query: 2102 GLTAKVFRTYNASITLDGMLSNETKAGDVAEKIVIYQHANKEVAIICNHQRSVSKSHTAQ 2281
            GLTAKVFRTYNASITLD  L  ET+ GDVAEKIVIY  ANK+VAIICNHQR++SKSH AQ
Sbjct: 693  GLTAKVFRTYNASITLDEKLYEETEDGDVAEKIVIYNQANKQVAIICNHQRTISKSHDAQ 752

Query: 2282 MSRLSEKMDELKAVMDELKTDLTRAKKGKPPLKDADGKQKKNLAPEALERKIAQTNAKIE 2461
            MSRL+EK++ELK+ + ELKTDL RAKKGKPPLK ADGKQK++L PEA+E+KIA TN KIE
Sbjct: 753  MSRLTEKIEELKSTLKELKTDLDRAKKGKPPLKGADGKQKRSLTPEAIEKKIATTNQKIE 812

Query: 2462 KMERDMRTKEDLKTVALGTSKINYLDPRISVAWCKRHEVPIEKIFNKSLLAKFAWAMDVD 2641
            KME  M+TKEDLKTVALGTSKINYLDPRI+VAWCKRHEVPI+KIFNKSLLAKF WAMDVD
Sbjct: 813  KMEMAMKTKEDLKTVALGTSKINYLDPRITVAWCKRHEVPIDKIFNKSLLAKFTWAMDVD 872

Query: 2642 PSFRF 2656
            P FRF
Sbjct: 873  PQFRF 877



 Score =  244 bits (622), Expect(2) = 0.0
 Identities = 169/429 (39%), Positives = 201/429 (46%), Gaps = 6/429 (1%)
 Frame = +1

Query: 103  PIVFKRN-KTISKQNQLNSEIKKPSSQNDGLSGR--HPRDAVSP-NGQNXXXXXXXXXXX 270
            PIVFKR   + SKQNQLN E KKPSS +   +G+  + +   SP    N           
Sbjct: 24   PIVFKRGGNSTSKQNQLNPEAKKPSSSSQNSNGQSLNLQKGKSPIPSSNASPMKSSTGSP 83

Query: 271  XXXXXXXXIGNLKESTSIADXXXXXXXXXXXXNDAGXXXXXXXXXXXXVDSEDSDDDKPL 450
                       LK   +               +               VD EDS+DDKPL
Sbjct: 84   KASASSAKASPLKSPLTYTRALTSSNDQLKQASKQVVSNAVKEETKSIVDDEDSEDDKPL 143

Query: 451  SYRLPIASTTLPKSNSPRVSKGLXXXXXXXXXXEKAKVNXXXXXXXXXXXXXXXXRFKLK 630
            S R+        K ++  V+KG+                                RF +K
Sbjct: 144  SSRI--------KGSTNNVNKGVTAPAHVKDEPSD------------DDEVPLSSRFAMK 183

Query: 631  S-CGPSSVKKYDSDEEKPLASKILQNGSNKRDSELVKSHKVLNKRPLSDVSTSVQSAVKK 807
            S  G SS K   S E +P  SK   NGS K D +  KS  V  KRP+ +   S  S+ KK
Sbjct: 184  SNAGTSSSKSIRSSEIRPFPSKSQLNGSTKNDKQQ-KSSVVPTKRPMDNKVPSNHSSAKK 242

Query: 808  PKLSDAXXXXXXXXXXXXAESKTDDDDDYVPIGQRMKKLTVPDNKSQSAXXXXXXXXXXX 987
            PKL DA             E K DDDD ++ I QRMKK     NKS  A           
Sbjct: 243  PKLLDACTTTKVKQVTVKVEQKADDDD-HLTISQRMKKADSSANKSSFAKKKVTKVVSSS 301

Query: 988  XXXXXXXXXXXXXXXXXXXXXXXXXXTKVPPGSGEGQK-WTTLVHSGVIFPPPYKPHGVK 1164
                                      TKV PGS +GQK WTTLVH+GVIFPPPYKPHGVK
Sbjct: 302  LKKTTQKNKKQMKNSKYSKS------TKVQPGSSDGQKKWTTLVHNGVIFPPPYKPHGVK 355

Query: 1165 MLYNGQPVQLTPEQEEVATMFAVMKDTDYATKPKFIENFMTDWRPILGKNHVIKKFELCD 1344
            +LY G+P+ LTPEQEEVATMFAVMKDTDY  KP+F +NF  DWR +LGKNHVI+K + CD
Sbjct: 356  ILYKGKPIDLTPEQEEVATMFAVMKDTDYVQKPQFRQNFWNDWRKLLGKNHVIQKLDDCD 415

Query: 1345 FTPIYEWHQ 1371
            F PIYEWHQ
Sbjct: 416  FNPIYEWHQ 424


>ref|XP_002266885.1| PREDICTED: DNA topoisomerase 1 [Vitis vinifera]
            gi|296082698|emb|CBI21703.3| unnamed protein product
            [Vitis vinifera]
          Length = 857

 Score =  747 bits (1929), Expect(2) = 0.0
 Identities = 369/425 (86%), Positives = 393/425 (92%)
 Frame = +2

Query: 1382 MWAIVDGVKEKVGNFRVEPPGLFRGRGEHPKMGKLKRRIRPRDITINIGKDAPIPECPIP 1561
            MWAIVDGVKEKVGNFRVEPPGLFRGRGEHPKMGKLKRRI P DITINIGK++ IPECPIP
Sbjct: 434  MWAIVDGVKEKVGNFRVEPPGLFRGRGEHPKMGKLKRRIHPSDITINIGKNSQIPECPIP 493

Query: 1562 GERWKEVKHDNTVTWLAFWNDPINPKEFKYVFLAASSSLKGQSDKEKYEKARLLKDYIHN 1741
            GE WKEVKHDNTVTWLAFWNDPINPKEFKYVFLAASSSLKGQSDKEKYEKAR LK+YI +
Sbjct: 494  GESWKEVKHDNTVTWLAFWNDPINPKEFKYVFLAASSSLKGQSDKEKYEKARKLKNYIKD 553

Query: 1742 IRANYTKDFVSKDISKRQIAVATYLIDKLALRAGNEKDDDEADTVGCCTLKVENVSLVPP 1921
            IRA YTKDFVSKDI+KRQIAVATYLIDKLALRAGNEKDDDEADTVGCCTLKVENV   PP
Sbjct: 554  IRATYTKDFVSKDITKRQIAVATYLIDKLALRAGNEKDDDEADTVGCCTLKVENVIPEPP 613

Query: 1922 NQLQFDFLGKDSIRYFNTVEVELPVYKAIGLFKSGKKDGEDLFDKLDTNKLNAHLKELMP 2101
            N LQFDFLGKDSIRY  TVEVELPVYKAI  F+ GK   +DLFDKLDT+KLNAHLKELMP
Sbjct: 614  NSLQFDFLGKDSIRYEKTVEVELPVYKAIEQFRVGKSGSDDLFDKLDTSKLNAHLKELMP 673

Query: 2102 GLTAKVFRTYNASITLDGMLSNETKAGDVAEKIVIYQHANKEVAIICNHQRSVSKSHTAQ 2281
            GLTAKVFRTYNASITLD ML+ +TK GDVA+K+V+YQHANKEVAIICNHQR++SKSHTAQ
Sbjct: 674  GLTAKVFRTYNASITLDEMLNKDTKEGDVAQKVVVYQHANKEVAIICNHQRTISKSHTAQ 733

Query: 2282 MSRLSEKMDELKAVMDELKTDLTRAKKGKPPLKDADGKQKKNLAPEALERKIAQTNAKIE 2461
            M+RL+EK+DE+K V++ LKTDL RAKKGKPPLKDADGK ++NL PEALERKIAQTNAKIE
Sbjct: 734  MTRLTEKIDEMKGVLNGLKTDLARAKKGKPPLKDADGK-RRNLTPEALERKIAQTNAKIE 792

Query: 2462 KMERDMRTKEDLKTVALGTSKINYLDPRISVAWCKRHEVPIEKIFNKSLLAKFAWAMDVD 2641
            KMERD  TKEDLKTVALGTSKINYLDPRISVAWCKR EVPIEK+FNKSLLAKFAWAMDV 
Sbjct: 793  KMERDKDTKEDLKTVALGTSKINYLDPRISVAWCKRQEVPIEKVFNKSLLAKFAWAMDVP 852

Query: 2642 PSFRF 2656
            P FRF
Sbjct: 853  PDFRF 857



 Score =  241 bits (615), Expect(2) = 0.0
 Identities = 182/453 (40%), Positives = 212/453 (46%), Gaps = 10/453 (2%)
 Frame = +1

Query: 43   MAVDTCVKPKFFXXXXXXXE----PIVFKRNKTISKQNQLNSEIKKPSSQNDGLSGRHPR 210
            MAV+ CV PK F       +    P+VFKR+   S  N  NS +K  S     +SG    
Sbjct: 1    MAVEACVNPKMFNNEVDDDDDDERPLVFKRSSNSSASNN-NSRLKIQS-----ISGSKRP 54

Query: 211  DAVSPNGQNXXXXXXXXXXXXXXXXXXXIGNLKESTSIADXXXXXXXXXXXXNDAGXXXX 390
            D    NGQ                        K S  +                 G    
Sbjct: 55   DDAHSNGQKKDKGMAPPMPA------------KGSGRVTGSVKSPPQQVGRGVVVGNSKV 102

Query: 391  XXXXXXXXVDSEDSDDDKPLSYRLPIASTTLPKSNSPRVSKGLXXXXXXXXXXEKAKVNX 570
                    +DS DS+DDKPLS RL   S+ LPK      + GL          E+     
Sbjct: 103  EAQNKKAELDS-DSEDDKPLSVRL---SSGLPKGKGSSNNVGLGRGGVGGVKKEE----- 153

Query: 571  XXXXXXXXXXXXXXXRFKLKSCGPSSVKKYDSDEEKPLASKILQNG-SNKRDSELVKSHK 747
                           +F+LKS           DE+KPL  K+ QNG ++KRD    KS  
Sbjct: 154  ---DDDDDDKIPLSSKFQLKS-----------DEKKPLPLKVNQNGGTDKRD----KSPT 195

Query: 748  VLNK-RPLSDVSTSV--QSAVKKPKLS-DAXXXXXXXXXXXXAESKT-DDDDDYVPIGQR 912
            VLNK RPL  V++S+   S VKKPK+S  +            AE K  DDDDD +PI QR
Sbjct: 196  VLNKKRPLDGVNSSLGQSSLVKKPKISGQSAQPFKVTHATAKAEPKVEDDDDDDMPISQR 255

Query: 913  MKKLTVPDNKSQSAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTKVPPGSGE 1092
            MKK       S +                                      TKVPP SGE
Sbjct: 256  MKKSGA---SSGNKPVPAKQKVTKVVSSTSFKKTKDIKSKKMEKNSKYSKSTKVPPSSGE 312

Query: 1093 GQKWTTLVHSGVIFPPPYKPHGVKMLYNGQPVQLTPEQEEVATMFAVMKDTDYATKPKFI 1272
            GQKWTTLVH+GVIFPPPYKPHGVKMLY G+PV LTPEQEEVATMFAVM DTDY  K KF 
Sbjct: 313  GQKWTTLVHNGVIFPPPYKPHGVKMLYKGKPVDLTPEQEEVATMFAVMLDTDYMQKEKFK 372

Query: 1273 ENFMTDWRPILGKNHVIKKFELCDFTPIYEWHQ 1371
            ENFM DWR ILGKNHVI++ + CDFTPIYEWHQ
Sbjct: 373  ENFMADWRKILGKNHVIQRLDDCDFTPIYEWHQ 405


>dbj|BAK32960.1| topoisomerase I [Ophiorrhiza pseudofasciculata]
          Length = 925

 Score =  744 bits (1921), Expect(2) = 0.0
 Identities = 367/426 (86%), Positives = 394/426 (92%), Gaps = 1/426 (0%)
 Frame = +2

Query: 1382 MWAIVDGVKEKVGNFRVEPPGLFRGRGEHPKMGKLKRRIRPRDITINIGKDAPIPECPIP 1561
            MWAIVDGVKEKVGNFRVEPPGLFRGRGEHPKMGKLK+RIRPRDITINIGKDAPIPECPIP
Sbjct: 500  MWAIVDGVKEKVGNFRVEPPGLFRGRGEHPKMGKLKKRIRPRDITINIGKDAPIPECPIP 559

Query: 1562 GERWKEVKHDNTVTWLAFWNDPINPKEFKYVFLAASSSLKGQSDKEKYEKARLLKDYIHN 1741
            GERWKEV++ NTVTWLA+WNDPIN KEFKYVFLAASS+LKGQSDKEKYEKARLLKDYIH 
Sbjct: 560  GERWKEVRNGNTVTWLAYWNDPINQKEFKYVFLAASSTLKGQSDKEKYEKARLLKDYIHG 619

Query: 1742 IRANYTKDFVS-KDISKRQIAVATYLIDKLALRAGNEKDDDEADTVGCCTLKVENVSLVP 1918
            IRA YTKDF + KD  K+QIAVATYLIDKLALRAGNEKDDDEADTVGCCTLKVENV  VP
Sbjct: 620  IRAAYTKDFTNNKDPMKKQIAVATYLIDKLALRAGNEKDDDEADTVGCCTLKVENVEPVP 679

Query: 1919 PNQLQFDFLGKDSIRYFNTVEVELPVYKAIGLFKSGKKDGEDLFDKLDTNKLNAHLKELM 2098
            PN L+FDFLGKDSIRY N V+VE  V+KAI  F+SGK+  EDLFD+LDT+KLNAHLKELM
Sbjct: 680  PNILKFDFLGKDSIRYQNEVQVEPAVFKAIQQFRSGKEGSEDLFDRLDTSKLNAHLKELM 739

Query: 2099 PGLTAKVFRTYNASITLDGMLSNETKAGDVAEKIVIYQHANKEVAIICNHQRSVSKSHTA 2278
            PGLTAKVFRTYNASITLD MLS ETK G+VAE +V+YQHANKEVAIICNHQR+VSKSH+A
Sbjct: 740  PGLTAKVFRTYNASITLDDMLSKETKGGEVAENVVVYQHANKEVAIICNHQRTVSKSHSA 799

Query: 2279 QMSRLSEKMDELKAVMDELKTDLTRAKKGKPPLKDADGKQKKNLAPEALERKIAQTNAKI 2458
            QMSRL+EK+DELK  ++ELKTDL+RAKKGKPP K ADGK K+NL PEALERKI QTNAKI
Sbjct: 800  QMSRLNEKIDELKTALEELKTDLSRAKKGKPPTKGADGKAKRNLNPEALERKITQTNAKI 859

Query: 2459 EKMERDMRTKEDLKTVALGTSKINYLDPRISVAWCKRHEVPIEKIFNKSLLAKFAWAMDV 2638
            EKMERD  TKEDLKTVALGTSKINYLDPRI+VAWCKRHEVPIEKIFNKSLLAKFAW+MDV
Sbjct: 860  EKMERDKETKEDLKTVALGTSKINYLDPRITVAWCKRHEVPIEKIFNKSLLAKFAWSMDV 919

Query: 2639 DPSFRF 2656
            DPSFRF
Sbjct: 920  DPSFRF 925



 Score =  244 bits (622), Expect(2) = 0.0
 Identities = 147/337 (43%), Positives = 172/337 (51%), Gaps = 19/337 (5%)
 Frame = +1

Query: 418  DSEDSDDDKPLSYRLPIASTTLPKSNSPRVSKGLXXXXXXXXXXEKAKVNXXXXXXXXXX 597
            +SE SDD+KPLS R     ++  KSN      G           E               
Sbjct: 145  NSESSDDEKPLSART-FGCSSKGKSNHANKEGGDSCSIRRPVIEESEDSEDEKPLSC--- 200

Query: 598  XXXXXXRFKLKSC-GPSSVKKYDSDEEKPLASKILQNGSNKRDSELVKSHKVLNKRPLSD 774
                  RF  KS  G S+ K YDSDE+KPLA+K+ QNGS  RD  + KS  + NKRP  +
Sbjct: 201  ------RFTSKSSLGESTSKSYDSDEKKPLAAKVQQNGSASRDGPMNKSASLSNKRPPGE 254

Query: 775  VSTSVQSAVKKPKLSDAXXXXXXXXXXXXAESKTDDDDDYVPIGQRMKKLTVPDNKSQ-- 948
              +  QS+VKKPKLS               E K +DDDD +P+ QR KK     +K +  
Sbjct: 255  AKSLNQSSVKKPKLSSPITSISNKQAAVKPEPKAEDDDDNIPLSQRGKKSQSATSKPKDD 314

Query: 949  ----------------SAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTKVPP 1080
                            S                                      +KVPP
Sbjct: 315  DDDNVPISQRIKKSPASVSKSSVPVKKASTVVSSSLKKVNKNSKKVIKKTAYTKSSKVPP 374

Query: 1081 GSGEGQKWTTLVHSGVIFPPPYKPHGVKMLYNGQPVQLTPEQEEVATMFAVMKDTDYATK 1260
            GSGEGQKWTTLVH+GVIFPPPYKPHGVKMLY  QP+ LTPEQEEVATMFAVM DTDY  K
Sbjct: 375  GSGEGQKWTTLVHNGVIFPPPYKPHGVKMLYKRQPITLTPEQEEVATMFAVMLDTDYMNK 434

Query: 1261 PKFIENFMTDWRPILGKNHVIKKFELCDFTPIYEWHQ 1371
            P F ENF +DW+ ILGKNH+I+  E CDF PIYEWHQ
Sbjct: 435  PCFKENFFSDWKKILGKNHMIQNLEDCDFGPIYEWHQ 471


>ref|XP_002317355.1| DNA topoisomerase family protein [Populus trichocarpa]
            gi|222860420|gb|EEE97967.1| DNA topoisomerase family
            protein [Populus trichocarpa]
          Length = 860

 Score =  745 bits (1923), Expect(2) = 0.0
 Identities = 365/425 (85%), Positives = 387/425 (91%)
 Frame = +2

Query: 1382 MWAIVDGVKEKVGNFRVEPPGLFRGRGEHPKMGKLKRRIRPRDITINIGKDAPIPECPIP 1561
            MWAIV+GVKEKVGNFRVEPPGLFRGRGEHPKMGKLK RIRP DITINIGKDAPIP+CPIP
Sbjct: 436  MWAIVNGVKEKVGNFRVEPPGLFRGRGEHPKMGKLKSRIRPSDITINIGKDAPIPKCPIP 495

Query: 1562 GERWKEVKHDNTVTWLAFWNDPINPKEFKYVFLAASSSLKGQSDKEKYEKARLLKDYIHN 1741
            GERWKEVKHDNTVTWLAFWNDPINPKEFKYVFLAASSSLKGQSDKEKYEKAR LKDYIHN
Sbjct: 496  GERWKEVKHDNTVTWLAFWNDPINPKEFKYVFLAASSSLKGQSDKEKYEKARKLKDYIHN 555

Query: 1742 IRANYTKDFVSKDISKRQIAVATYLIDKLALRAGNEKDDDEADTVGCCTLKVENVSLVPP 1921
            IR  YTKDF SKDI+KRQIAVATYLIDKLALRAGNEKDDDEADTVGCCTLKV NV  +PP
Sbjct: 556  IRTAYTKDFASKDITKRQIAVATYLIDKLALRAGNEKDDDEADTVGCCTLKVANVECIPP 615

Query: 1922 NQLQFDFLGKDSIRYFNTVEVELPVYKAIGLFKSGKKDGEDLFDKLDTNKLNAHLKELMP 2101
            N+L+FDFLGKDSIRY NTVEVELPVYKAI  F+  KK  +DLFD LDT+KLNAHLKELMP
Sbjct: 616  NKLKFDFLGKDSIRYENTVEVELPVYKAIRQFQVAKKPTDDLFDSLDTSKLNAHLKELMP 675

Query: 2102 GLTAKVFRTYNASITLDGMLSNETKAGDVAEKIVIYQHANKEVAIICNHQRSVSKSHTAQ 2281
            GLTAKVFRTYNASITLD  L  ET+ GDVAEK VIY  ANK+VAIICNHQR++SKSH AQ
Sbjct: 676  GLTAKVFRTYNASITLDEKLYEETEDGDVAEKFVIYNQANKQVAIICNHQRTISKSHDAQ 735

Query: 2282 MSRLSEKMDELKAVMDELKTDLTRAKKGKPPLKDADGKQKKNLAPEALERKIAQTNAKIE 2461
            MSRL+EK++ELK  + E KTDL RAKKGKPPLKDADGKQK+NL PEA+E+KIA TN KIE
Sbjct: 736  MSRLTEKLEELKGTLKEFKTDLDRAKKGKPPLKDADGKQKRNLTPEAIEKKIATTNQKIE 795

Query: 2462 KMERDMRTKEDLKTVALGTSKINYLDPRISVAWCKRHEVPIEKIFNKSLLAKFAWAMDVD 2641
            KME  M+TKEDLKTVALGTSKINYLDPRI+VAWCKRHEVPIEKIFNKSLLAKF WAMDVD
Sbjct: 796  KMELSMKTKEDLKTVALGTSKINYLDPRITVAWCKRHEVPIEKIFNKSLLAKFTWAMDVD 855

Query: 2642 PSFRF 2656
            P FRF
Sbjct: 856  PQFRF 860



 Score =  243 bits (619), Expect(2) = 0.0
 Identities = 174/426 (40%), Positives = 204/426 (47%), Gaps = 3/426 (0%)
 Frame = +1

Query: 103  PIVFKRN-KTISKQNQLNSEIKKPSSQNDGLSGRHPRDAVSPNGQNXXXXXXXXXXXXXX 279
            PIVFKR   + SKQNQ N E KKPSS +   +G+           N              
Sbjct: 23   PIVFKRGGNSTSKQNQPNLEAKKPSSSSQNSNGQ---------SLNAHKGKSPISSSNAS 73

Query: 280  XXXXXIGNLKESTSIADXXXXXXXXXXXXNDAGXXXXXXXXXXXXVDSEDSDDDKPLSYR 459
                 IG+ K S S A               +             VD +DS+DDKPLS R
Sbjct: 74   PVKSPIGSPKASASSAKASPMKPPVTYSRVPSSSIAVKEETKPI-VDDDDSEDDKPLSSR 132

Query: 460  LPIASTTLPKSNSPRVSKGLXXXXXXXXXXEKAKVNXXXXXXXXXXXXXXXXRFKLKS-C 636
                     K ++   +KG+            A+V                 RF  KS  
Sbjct: 133  F--------KGSTNNANKGVTVP---------ARVKDEHSDDDEVPLSS---RFAAKSNA 172

Query: 637  GPSSVKKYDSDEEKPLASKILQNGSNKRDSELVKSHKVLNKRPLSDVSTSVQSAVKKPKL 816
            G SS K   S E+  L SKI  NGS  +D +  KS  V  KRP+ +   S QS  KKPKL
Sbjct: 173  GSSSCKTISSSEKILLVSKIQLNGSTAKDKQQ-KSSAVPTKRPMDNKVPSNQSFAKKPKL 231

Query: 817  SDAXXXXXXXXXXXXAESKTDDDDDYVPIGQRMKKLTVPDNKSQSAXXXXXXXXXXXXXX 996
            SDA            AE K DDDD ++ I QRMKK +   NKS S               
Sbjct: 232  SDASTTKQVTVK---AELKADDDD-HLTISQRMKKASSSSNKSLSVKQNVTKVVSFSSKK 287

Query: 997  XXXXXXXXXXXXXXXXXXXXXXXTKVPPGSGEGQK-WTTLVHSGVIFPPPYKPHGVKMLY 1173
                                   TKV PGS +GQK W TLVH+GVIFPPPYKPHGVKMLY
Sbjct: 288  TTKNNKKQMQNSKYSKS------TKVQPGSSDGQKKWKTLVHNGVIFPPPYKPHGVKMLY 341

Query: 1174 NGQPVQLTPEQEEVATMFAVMKDTDYATKPKFIENFMTDWRPILGKNHVIKKFELCDFTP 1353
             G+PV LTPEQEEVATMFAVMKDT+Y  KP+F++NF  DWR +LGKNHVI+K E CDF P
Sbjct: 342  KGKPVDLTPEQEEVATMFAVMKDTEYVQKPQFLQNFWNDWRTLLGKNHVIQKLEACDFNP 401

Query: 1354 IYEWHQ 1371
            IYEWHQ
Sbjct: 402  IYEWHQ 407


>dbj|BAG31375.1| topoisomerase I [Ophiorrhiza japonica]
          Length = 927

 Score =  744 bits (1920), Expect(2) = 0.0
 Identities = 368/426 (86%), Positives = 394/426 (92%), Gaps = 1/426 (0%)
 Frame = +2

Query: 1382 MWAIVDGVKEKVGNFRVEPPGLFRGRGEHPKMGKLKRRIRPRDITINIGKDAPIPECPIP 1561
            MWAIVDGVKEKVGNFRVEPPGLFRGRGEHPKMGKLK+RIRPRDITINIGKDAPIPECPIP
Sbjct: 502  MWAIVDGVKEKVGNFRVEPPGLFRGRGEHPKMGKLKKRIRPRDITINIGKDAPIPECPIP 561

Query: 1562 GERWKEVKHDNTVTWLAFWNDPINPKEFKYVFLAASSSLKGQSDKEKYEKARLLKDYIHN 1741
            GERWKEV++DNTVTWLAFW DPIN KEFKYVFLAASS+LKGQSDKEKYEKARLLKDYIH 
Sbjct: 562  GERWKEVRNDNTVTWLAFWIDPINQKEFKYVFLAASSTLKGQSDKEKYEKARLLKDYIHG 621

Query: 1742 IRANYTKDFVS-KDISKRQIAVATYLIDKLALRAGNEKDDDEADTVGCCTLKVENVSLVP 1918
            IRA YTKDF + KD  K+QIAVATYLIDKLALRAGNEKDDDEADTVGCCTLKVENV  VP
Sbjct: 622  IRAAYTKDFTNNKDPMKKQIAVATYLIDKLALRAGNEKDDDEADTVGCCTLKVENVEPVP 681

Query: 1919 PNQLQFDFLGKDSIRYFNTVEVELPVYKAIGLFKSGKKDGEDLFDKLDTNKLNAHLKELM 2098
            PN L+FDFLGKDSIRY N V+VE  V+KAI  F+SGK+  EDLFD+LDT+KLNAHLKELM
Sbjct: 682  PNILKFDFLGKDSIRYQNEVQVEPAVFKAIQQFRSGKEGSEDLFDRLDTSKLNAHLKELM 741

Query: 2099 PGLTAKVFRTYNASITLDGMLSNETKAGDVAEKIVIYQHANKEVAIICNHQRSVSKSHTA 2278
            PGLTAKVFRTYNASITLD MLS ETK G+VAEK+V+YQHANKEVAIICNHQR+VSKSH+A
Sbjct: 742  PGLTAKVFRTYNASITLDDMLSKETKGGEVAEKVVVYQHANKEVAIICNHQRTVSKSHSA 801

Query: 2279 QMSRLSEKMDELKAVMDELKTDLTRAKKGKPPLKDADGKQKKNLAPEALERKIAQTNAKI 2458
            QMSRL+EK+DELK  M+ELKTDL+R KKGKPP K ADGK K+NL PEALERK+AQ NAKI
Sbjct: 802  QMSRLNEKIDELKTAMEELKTDLSRVKKGKPPSKGADGKPKRNLNPEALERKMAQINAKI 861

Query: 2459 EKMERDMRTKEDLKTVALGTSKINYLDPRISVAWCKRHEVPIEKIFNKSLLAKFAWAMDV 2638
            EKMERD  TKEDLKTVALGTSKINYLDPRI+VAWCKRHEVPIEKIFNKSLLAKFAW+MDV
Sbjct: 862  EKMERDKETKEDLKTVALGTSKINYLDPRITVAWCKRHEVPIEKIFNKSLLAKFAWSMDV 921

Query: 2639 DPSFRF 2656
            DPSFRF
Sbjct: 922  DPSFRF 927



 Score =  239 bits (611), Expect(2) = 0.0
 Identities = 146/339 (43%), Positives = 172/339 (50%), Gaps = 21/339 (6%)
 Frame = +1

Query: 418  DSEDSDDDKPLSYRLPIASTTLPKSNSPRVSKGLXXXXXXXXXXEKAKVNXXXXXXXXXX 597
            +SE SDD+KPLS R     ++  KSN      G           E               
Sbjct: 145  NSESSDDEKPLSART-FGCSSKGKSNHANKEGGDSCSIRRRVIEESEDSEDEKPLSR--- 200

Query: 598  XXXXXXRFKLKSC-GPSSVKKYDSDEEKPLASKILQNGSNKRDSELVKSHKVLNKRPLSD 774
                  RF  KS  G S+ K YDSDE+KPLA+K+ QNGS  RD  + KS  + NKRP  +
Sbjct: 201  ------RFTSKSSLGESTSKSYDSDEKKPLAAKVQQNGSVSRDGPMNKSASLSNKRPPGE 254

Query: 775  VSTSVQSAVKKPKLSD--AXXXXXXXXXXXXAESKTDDDDDYVPIGQRMKKLTVPDNKSQ 948
            V +  QS+VKKPKLS                 E K +DDDD +P+ QR KK     +K +
Sbjct: 255  VKSLNQSSVKKPKLSSPITSISNKQAAVKPEPEPKAEDDDDNIPLSQRGKKSQAATSKPK 314

Query: 949  ------------------SAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTKV 1074
                              S                                      +KV
Sbjct: 315  DEDDDNVPIAQRIKKSPASVSKSSAPVKKASTVVSPSLKKVNKNSKKVIKKTAYTKSSKV 374

Query: 1075 PPGSGEGQKWTTLVHSGVIFPPPYKPHGVKMLYNGQPVQLTPEQEEVATMFAVMKDTDYA 1254
            PPGSGEGQKWTTLVH+GVIFPPPY PHGVKMLY  QP+ LTPEQEEVATMFAVM DTDY 
Sbjct: 375  PPGSGEGQKWTTLVHNGVIFPPPYNPHGVKMLYKRQPITLTPEQEEVATMFAVMLDTDYM 434

Query: 1255 TKPKFIENFMTDWRPILGKNHVIKKFELCDFTPIYEWHQ 1371
             KP+F ENF +DW+ +LGKNH I+  E CDF PIYEWHQ
Sbjct: 435  NKPRFKENFFSDWKKMLGKNHTIQNLEDCDFGPIYEWHQ 473


>dbj|BAK32962.1| topoisomerase I [Ophiorrhiza trichocarpon var. glabra]
          Length = 920

 Score =  727 bits (1877), Expect(2) = 0.0
 Identities = 360/419 (85%), Positives = 388/419 (92%), Gaps = 1/419 (0%)
 Frame = +2

Query: 1382 MWAIVDGVKEKVGNFRVEPPGLFRGRGEHPKMGKLKRRIRPRDITINIGKDAPIPECPIP 1561
            MWAIVDGVKEKVGNFRVEPPGLFRGRGEHPKMGKLK+RIRPRDITINIGKDAPIPECPIP
Sbjct: 501  MWAIVDGVKEKVGNFRVEPPGLFRGRGEHPKMGKLKKRIRPRDITINIGKDAPIPECPIP 560

Query: 1562 GERWKEVKHDNTVTWLAFWNDPINPKEFKYVFLAASSSLKGQSDKEKYEKARLLKDYIHN 1741
            GERWKEV++DNTVTWLA+WNDPIN KEFKYVFLAASS+LKGQSDKEKYEKARLLKDYIH 
Sbjct: 561  GERWKEVRNDNTVTWLAYWNDPINQKEFKYVFLAASSTLKGQSDKEKYEKARLLKDYIHG 620

Query: 1742 IRANYTKDFVS-KDISKRQIAVATYLIDKLALRAGNEKDDDEADTVGCCTLKVENVSLVP 1918
            IRA YTKDF + KD  K+QIAVATYLIDKLALRAGNEKDDDEADTVGCCTLKVENV  VP
Sbjct: 621  IRAAYTKDFTNNKDPMKKQIAVATYLIDKLALRAGNEKDDDEADTVGCCTLKVENVEPVP 680

Query: 1919 PNQLQFDFLGKDSIRYFNTVEVELPVYKAIGLFKSGKKDGEDLFDKLDTNKLNAHLKELM 2098
            PN L+FDFLGKDSIRY N V+VE  V+KAI  F+SGK+  EDLFD+LDT+KLNAHLKELM
Sbjct: 681  PNILKFDFLGKDSIRYQNEVQVEPAVFKAIQQFRSGKEGSEDLFDRLDTSKLNAHLKELM 740

Query: 2099 PGLTAKVFRTYNASITLDGMLSNETKAGDVAEKIVIYQHANKEVAIICNHQRSVSKSHTA 2278
            PGLTAKVFRTYNASITLD MLS +T  G+VAEK+V+YQHANKEVAIICNHQR+VSKSH+A
Sbjct: 741  PGLTAKVFRTYNASITLDDMLSKKTNGGEVAEKVVVYQHANKEVAIICNHQRTVSKSHSA 800

Query: 2279 QMSRLSEKMDELKAVMDELKTDLTRAKKGKPPLKDADGKQKKNLAPEALERKIAQTNAKI 2458
            QMSRL+EK+DELK  ++ELKTDL+RAKKGKP  K ADGK K+NL PEALERKIAQTNAKI
Sbjct: 801  QMSRLNEKIDELKTALEELKTDLSRAKKGKPLSKGADGKPKRNLNPEALERKIAQTNAKI 860

Query: 2459 EKMERDMRTKEDLKTVALGTSKINYLDPRISVAWCKRHEVPIEKIFNKSLLAKFAWAMD 2635
            EKMERD  TKEDLKTVALGTSKINYLDPRI+VAWCKRHEVPIEKIFNKSLLAKFAWAM+
Sbjct: 861  EKMERDKETKEDLKTVALGTSKINYLDPRITVAWCKRHEVPIEKIFNKSLLAKFAWAMN 919



 Score =  244 bits (624), Expect(2) = 0.0
 Identities = 146/337 (43%), Positives = 173/337 (51%), Gaps = 19/337 (5%)
 Frame = +1

Query: 418  DSEDSDDDKPLSYRLPIASTTLPKSNSPRVSKGLXXXXXXXXXXEKAKVNXXXXXXXXXX 597
            +SE SDD+KPLS R     ++  KSN      G           E               
Sbjct: 146  NSESSDDEKPLSART-FGCSSKGKSNHANKEGGDSCSIRRPVIEESEDSEDEKPLSR--- 201

Query: 598  XXXXXXRFKLKSC-GPSSVKKYDSDEEKPLASKILQNGSNKRDSELVKSHKVLNKRPLSD 774
                  RF  KS  G S+ K YDSDE+KPLA+K+  NGS  RDS + KS  + NKRP  +
Sbjct: 202  ------RFTSKSSLGESTSKSYDSDEKKPLAAKVQPNGSASRDSPMNKSASLSNKRPPGE 255

Query: 775  VSTSVQSAVKKPKLSDAXXXXXXXXXXXXAESKTDDDDDYVPIGQRMKKLTVPDNKSQ-- 948
            V +  QS++KKPKLS               E K +DDDD +P+ QR KK     +K +  
Sbjct: 256  VKSLNQSSLKKPKLSSPITSISNKQAAVKPEPKAEDDDDNIPLSQRGKKSQTATSKPKDE 315

Query: 949  ----------------SAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTKVPP 1080
                            S                                      +KVPP
Sbjct: 316  DDDNVPISQRIKKSPASVSKSSAPVKKASTVVSPSLKKVNKKSKKVIKKTAYTKSSKVPP 375

Query: 1081 GSGEGQKWTTLVHSGVIFPPPYKPHGVKMLYNGQPVQLTPEQEEVATMFAVMKDTDYATK 1260
            GSGEGQKWTTLVH+GVIFPPPYKPHGVKMLY  QP+ LTPEQEEVATMFAVM DTDY  K
Sbjct: 376  GSGEGQKWTTLVHNGVIFPPPYKPHGVKMLYKRQPITLTPEQEEVATMFAVMLDTDYMNK 435

Query: 1261 PKFIENFMTDWRPILGKNHVIKKFELCDFTPIYEWHQ 1371
            P+F ENF +DW+ +LGKNH I+  E CDF PIYEWHQ
Sbjct: 436  PRFKENFFSDWKKMLGKNHTIQNLEDCDFGPIYEWHQ 472


>dbj|BAK32958.1| topoisomerase I [Ophiorrhiza pedunculata]
          Length = 920

 Score =  727 bits (1877), Expect(2) = 0.0
 Identities = 360/419 (85%), Positives = 388/419 (92%), Gaps = 1/419 (0%)
 Frame = +2

Query: 1382 MWAIVDGVKEKVGNFRVEPPGLFRGRGEHPKMGKLKRRIRPRDITINIGKDAPIPECPIP 1561
            MWAIVDGVKEKVGNFRVEPPGLFRGRGEHPKMGKLK+RIRPRDITINIGKDAPIPECPIP
Sbjct: 501  MWAIVDGVKEKVGNFRVEPPGLFRGRGEHPKMGKLKKRIRPRDITINIGKDAPIPECPIP 560

Query: 1562 GERWKEVKHDNTVTWLAFWNDPINPKEFKYVFLAASSSLKGQSDKEKYEKARLLKDYIHN 1741
            GERWKEV++DNTVTWLA+WNDPIN KEFKYVFLAASS+LKGQSDKEKYEKARLLKDYIH 
Sbjct: 561  GERWKEVRNDNTVTWLAYWNDPINQKEFKYVFLAASSTLKGQSDKEKYEKARLLKDYIHG 620

Query: 1742 IRANYTKDFVS-KDISKRQIAVATYLIDKLALRAGNEKDDDEADTVGCCTLKVENVSLVP 1918
            IRA YTKDF + KD  K+QIAVATYLIDKLALRAGNEKDDDEADTVGCCTLKVENV  VP
Sbjct: 621  IRAAYTKDFTNNKDPMKKQIAVATYLIDKLALRAGNEKDDDEADTVGCCTLKVENVEPVP 680

Query: 1919 PNQLQFDFLGKDSIRYFNTVEVELPVYKAIGLFKSGKKDGEDLFDKLDTNKLNAHLKELM 2098
            PN L+FDFLGKDSIRY N V+VE  V+KAI  F+SGK+  EDLFD+LDT+KLNAHLKELM
Sbjct: 681  PNILKFDFLGKDSIRYQNEVQVEPAVFKAIHQFRSGKEGSEDLFDRLDTSKLNAHLKELM 740

Query: 2099 PGLTAKVFRTYNASITLDGMLSNETKAGDVAEKIVIYQHANKEVAIICNHQRSVSKSHTA 2278
            PGLTAKVFRTYNASITLD MLS +T  G+VAEK+V+YQHANKEVAIICNHQR+VSKSH+A
Sbjct: 741  PGLTAKVFRTYNASITLDDMLSKKTNGGEVAEKVVVYQHANKEVAIICNHQRTVSKSHSA 800

Query: 2279 QMSRLSEKMDELKAVMDELKTDLTRAKKGKPPLKDADGKQKKNLAPEALERKIAQTNAKI 2458
            QMSRL+EK+DELK  ++ELKTDL+RAKKGKP  K ADGK K+NL PEALERKIAQTNAKI
Sbjct: 801  QMSRLNEKIDELKTALEELKTDLSRAKKGKPLSKGADGKPKRNLNPEALERKIAQTNAKI 860

Query: 2459 EKMERDMRTKEDLKTVALGTSKINYLDPRISVAWCKRHEVPIEKIFNKSLLAKFAWAMD 2635
            EKMERD  TKEDLKTVALGTSKINYLDPRI+VAWCKRHEVPIEKIFNKSLLAKFAWAM+
Sbjct: 861  EKMERDKETKEDLKTVALGTSKINYLDPRITVAWCKRHEVPIEKIFNKSLLAKFAWAMN 919



 Score =  244 bits (624), Expect(2) = 0.0
 Identities = 146/337 (43%), Positives = 173/337 (51%), Gaps = 19/337 (5%)
 Frame = +1

Query: 418  DSEDSDDDKPLSYRLPIASTTLPKSNSPRVSKGLXXXXXXXXXXEKAKVNXXXXXXXXXX 597
            +SE SDD+KPLS R     ++  KSN      G           E               
Sbjct: 146  NSESSDDEKPLSART-FGCSSKGKSNHANKEGGDSCSIRRPVIEESEDSEDEKPLSR--- 201

Query: 598  XXXXXXRFKLKSC-GPSSVKKYDSDEEKPLASKILQNGSNKRDSELVKSHKVLNKRPLSD 774
                  RF  KS  G S+ K YDSDE+KPLA+K+  NGS  RDS + KS  + NKRP  +
Sbjct: 202  ------RFTSKSSLGESTSKSYDSDEKKPLAAKVQPNGSASRDSPMNKSASLSNKRPPGE 255

Query: 775  VSTSVQSAVKKPKLSDAXXXXXXXXXXXXAESKTDDDDDYVPIGQRMKKLTVPDNKSQ-- 948
            V +  QS++KKPKLS               E K +DDDD +P+ QR KK     +K +  
Sbjct: 256  VKSLNQSSLKKPKLSSPITSISNKQAAVKPEPKAEDDDDNIPLSQRGKKSQTATSKPKDE 315

Query: 949  ----------------SAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTKVPP 1080
                            S                                      +KVPP
Sbjct: 316  DDDNVPISQRIKKSPASVSKSSAPVKKASTVVSPSLKKVNKKSKKVIKKTAYTKSSKVPP 375

Query: 1081 GSGEGQKWTTLVHSGVIFPPPYKPHGVKMLYNGQPVQLTPEQEEVATMFAVMKDTDYATK 1260
            GSGEGQKWTTLVH+GVIFPPPYKPHGVKMLY  QP+ LTPEQEEVATMFAVM DTDY  K
Sbjct: 376  GSGEGQKWTTLVHNGVIFPPPYKPHGVKMLYKRQPITLTPEQEEVATMFAVMLDTDYMNK 435

Query: 1261 PKFIENFMTDWRPILGKNHVIKKFELCDFTPIYEWHQ 1371
            P+F ENF +DW+ +LGKNH I+  E CDF PIYEWHQ
Sbjct: 436  PRFKENFFSDWKKMLGKNHTIQNLEDCDFGPIYEWHQ 472


>gb|EYU30724.1| hypothetical protein MIMGU_mgv1a001121mg [Mimulus guttatus]
          Length = 883

 Score =  730 bits (1884), Expect(2) = 0.0
 Identities = 357/425 (84%), Positives = 388/425 (91%)
 Frame = +2

Query: 1382 MWAIVDGVKEKVGNFRVEPPGLFRGRGEHPKMGKLKRRIRPRDITINIGKDAPIPECPIP 1561
            MWA++DGV+EKVGNFRVEPPGLFRGRGEHPKMGKLKRRIRP DITINIG+DAPIPECPI 
Sbjct: 459  MWAVLDGVREKVGNFRVEPPGLFRGRGEHPKMGKLKRRIRPSDITINIGRDAPIPECPIE 518

Query: 1562 GERWKEVKHDNTVTWLAFWNDPINPKEFKYVFLAASSSLKGQSDKEKYEKARLLKDYIHN 1741
            GERWKE++HDNTVTWLA+W+DPIN KEFKYVFLAASS+LKGQSDKEKYEKARLLKDYI  
Sbjct: 519  GERWKEIRHDNTVTWLAYWSDPINGKEFKYVFLAASSTLKGQSDKEKYEKARLLKDYIQG 578

Query: 1742 IRANYTKDFVSKDISKRQIAVATYLIDKLALRAGNEKDDDEADTVGCCTLKVENVSLVPP 1921
            IR  YT+DFVSKD +K+QIAVATYLIDKLALRAGNEKDDDEADTVGCCTLKVENV  VPP
Sbjct: 579  IRTAYTRDFVSKDPAKKQIAVATYLIDKLALRAGNEKDDDEADTVGCCTLKVENVEPVPP 638

Query: 1922 NQLQFDFLGKDSIRYFNTVEVELPVYKAIGLFKSGKKDGEDLFDKLDTNKLNAHLKELMP 2101
            N L+FDFLGKDSIRY N VEVE  V+KAI  F+SGKK G+DLFDKLDT+KLNAHLKELMP
Sbjct: 639  NILKFDFLGKDSIRYQNEVEVETAVFKAIQQFRSGKKGGDDLFDKLDTSKLNAHLKELMP 698

Query: 2102 GLTAKVFRTYNASITLDGMLSNETKAGDVAEKIVIYQHANKEVAIICNHQRSVSKSHTAQ 2281
            GLTAKVFRTYNASITLD  LS ETK GD+AEK+V Y HANKEVAIICNHQR+VSK+H+AQ
Sbjct: 699  GLTAKVFRTYNASITLDDKLSRETKGGDLAEKVVTYNHANKEVAIICNHQRTVSKTHSAQ 758

Query: 2282 MSRLSEKMDELKAVMDELKTDLTRAKKGKPPLKDADGKQKKNLAPEALERKIAQTNAKIE 2461
            M RL EK+DELK V++ELKTDL RA+KGKP L  ADGK K+N+ PEALERKIAQT AKIE
Sbjct: 759  MLRLDEKIDELKGVLEELKTDLGRARKGKPLLAGADGKAKRNINPEALERKIAQTTAKIE 818

Query: 2462 KMERDMRTKEDLKTVALGTSKINYLDPRISVAWCKRHEVPIEKIFNKSLLAKFAWAMDVD 2641
            KMERD  TKEDLKTVALGTSKINYLDPRI+VAWCKRHEVPIEK+FNKSLL KF+WAMDVD
Sbjct: 819  KMERDKETKEDLKTVALGTSKINYLDPRITVAWCKRHEVPIEKMFNKSLLEKFSWAMDVD 878

Query: 2642 PSFRF 2656
            PSFRF
Sbjct: 879  PSFRF 883



 Score =  239 bits (610), Expect(2) = 0.0
 Identities = 163/430 (37%), Positives = 205/430 (47%), Gaps = 7/430 (1%)
 Frame = +1

Query: 103  PIVFKRNKTISKQNQLNSEIKKPSSQNDGLSGRHPRDAVSPNGQNXXXXXXXXXXXXXXX 282
            P+VFKR+ + SK  Q   E K  S +++   GR   D    NG N               
Sbjct: 22   PLVFKRSGSSSKPKQSEPENKLSSQKHNAQVGRQSSDVRPQNGTNANAQKGKSVTSSSSM 81

Query: 283  XXXXIGNL-----KESTSIADXXXXXXXXXXXXNDAGXXXXXXXXXXXXVDSEDSDDDKP 447
                  +L       S+  A                              +SEDS+DDKP
Sbjct: 82   KPPVRPSLVSPKSSNSSVKASPIKSPDVNSKPSTSVVGESKSVKSTIKEENSEDSEDDKP 141

Query: 448  LSYRLPIASTTLPKSNSPRVSKGLXXXXXXXXXXEKAKVNXXXXXXXXXXXXXXXXRFKL 627
            LS R    S+   K+N  + +K               K +                +F+ 
Sbjct: 142  LSARQVAGSS---KNNPNQTNK--------PNAPNLGKKSNVPKPEDSDDEIPLSAKFQG 190

Query: 628  KS-CGPSSVKKYDSDEEKPL-ASKILQNGSNKRDSELVKSHKVLNKRPLSDVSTSVQSAV 801
            KS  G S+ +   S+E+KPL A K  +NGS   +    K   VL KRP   V+++ QS +
Sbjct: 191  KSNAGASTSRSSHSEEKKPLVARKPDKNGSASTER---KPSTVLQKRPADGVASAGQSNL 247

Query: 802  KKPKLSDAXXXXXXXXXXXXAESKTDDDDDYVPIGQRMKKLTVPDNKSQSAXXXXXXXXX 981
            KKPKLSD+             E K +DD+D VP+ QR KK T P+ K   A         
Sbjct: 248  KKPKLSDSLASKDKKASVKP-EVKAEDDEDLVPLSQRTKKSTTPEKKPSPALKTNNKTNS 306

Query: 982  XXXXXXXXXXXXXXXXXXXXXXXXXXXXTKVPPGSGEGQKWTTLVHSGVIFPPPYKPHGV 1161
                                        +K+PP SG+GQKWTTLVH+GVIFPPPYKPHGV
Sbjct: 307  KTNSKTNKKSKQVSKDNNYSKS------SKLPPSSGDGQKWTTLVHNGVIFPPPYKPHGV 360

Query: 1162 KMLYNGQPVQLTPEQEEVATMFAVMKDTDYATKPKFIENFMTDWRPILGKNHVIKKFELC 1341
            KMLY G+PV LTPEQEEVATM+AVM +TDY  KP+F ENFMTDW+ ILGKNHVI+  E C
Sbjct: 361  KMLYKGKPVNLTPEQEEVATMYAVMLETDYLKKPQFKENFMTDWKKILGKNHVIQSLEHC 420

Query: 1342 DFTPIYEWHQ 1371
            DFTPIYEWHQ
Sbjct: 421  DFTPIYEWHQ 430


>dbj|BAG31374.1| topoisomerase I [Ophiorrhiza liukiuensis]
          Length = 926

 Score =  730 bits (1884), Expect(2) = 0.0
 Identities = 361/426 (84%), Positives = 391/426 (91%), Gaps = 1/426 (0%)
 Frame = +2

Query: 1382 MWAIVDGVKEKVGNFRVEPPGLFRGRGEHPKMGKLKRRIRPRDITINIGKDAPIPECPIP 1561
            MWAIVDGVKEKVGNFRVEPPGLFRGRGEHPKMGKLK+RIRPRDITINIGKDAPIPECPIP
Sbjct: 501  MWAIVDGVKEKVGNFRVEPPGLFRGRGEHPKMGKLKKRIRPRDITINIGKDAPIPECPIP 560

Query: 1562 GERWKEVKHDNTVTWLAFWNDPINPKEFKYVFLAASSSLKGQSDKEKYEKARLLKDYIHN 1741
            GERWKEV++DNTVTWLAFWNDPIN KE KYVFLAASS+LKGQSDKEKYEKARLLKDYIH 
Sbjct: 561  GERWKEVRNDNTVTWLAFWNDPINQKECKYVFLAASSTLKGQSDKEKYEKARLLKDYIHG 620

Query: 1742 IRANYTKDFVS-KDISKRQIAVATYLIDKLALRAGNEKDDDEADTVGCCTLKVENVSLVP 1918
            IRA YTKDF + KD  K+QIAVATYLIDKLALRAGNEKDDDEADTVGCCTLKVENV  VP
Sbjct: 621  IRAAYTKDFTNNKDPMKKQIAVATYLIDKLALRAGNEKDDDEADTVGCCTLKVENVEPVP 680

Query: 1919 PNQLQFDFLGKDSIRYFNTVEVELPVYKAIGLFKSGKKDGEDLFDKLDTNKLNAHLKELM 2098
            PN L+ DF+GKDSIRY N V+VE  V+KAI  F+SGK+   DLFD+LDT+KLNAHLKELM
Sbjct: 681  PNILKIDFIGKDSIRYQNEVQVEPAVFKAIQQFRSGKEGCADLFDRLDTSKLNAHLKELM 740

Query: 2099 PGLTAKVFRTYNASITLDGMLSNETKAGDVAEKIVIYQHANKEVAIICNHQRSVSKSHTA 2278
            PGLTAKVFRTYNASITLD MLS ETK G VAEK+ +YQHANKEVAIICNHQR+VSKSH+A
Sbjct: 741  PGLTAKVFRTYNASITLDDMLSKETKGGKVAEKVGVYQHANKEVAIICNHQRTVSKSHSA 800

Query: 2279 QMSRLSEKMDELKAVMDELKTDLTRAKKGKPPLKDADGKQKKNLAPEALERKIAQTNAKI 2458
            QMSRL+EK+DELK  ++ELKTDL+RAKKGKPP K ADG+ K+NL PE+LERKIAQTNAKI
Sbjct: 801  QMSRLNEKIDELKTALEELKTDLSRAKKGKPPAKGADGEPKRNLNPESLERKIAQTNAKI 860

Query: 2459 EKMERDMRTKEDLKTVALGTSKINYLDPRISVAWCKRHEVPIEKIFNKSLLAKFAWAMDV 2638
            EKMERD +TKEDLK VAL TSKI+YLDPRI+VAWCKRHEVPIEKIFNKSLLAKFAW+MDV
Sbjct: 861  EKMERDKKTKEDLKAVALSTSKISYLDPRITVAWCKRHEVPIEKIFNKSLLAKFAWSMDV 920

Query: 2639 DPSFRF 2656
            DPSFRF
Sbjct: 921  DPSFRF 926



 Score =  235 bits (599), Expect(2) = 0.0
 Identities = 143/337 (42%), Positives = 171/337 (50%), Gaps = 19/337 (5%)
 Frame = +1

Query: 418  DSEDSDDDKPLSYRLPIASTTLPKSNSPRVSKGLXXXXXXXXXXEKAKVNXXXXXXXXXX 597
            +SE SDD+KPL  R    S+   KSN      G           E               
Sbjct: 146  NSESSDDEKPLIARTSGCSSK-GKSNHANKEGGDSCSIRRPVIEESEDSEDEKPLSR--- 201

Query: 598  XXXXXXRFKLKSC-GPSSVKKYDSDEEKPLASKILQNGSNKRDSELVKSHKVLNKRPLSD 774
                  RF  KS  G S+ K YDSDE+KPLA+K+ QNGS  RD  + KS  +LNKR   +
Sbjct: 202  ------RFPSKSSLGESTSKSYDSDEKKPLATKVQQNGSASRDGPMNKSASLLNKRAPGE 255

Query: 775  VSTSVQSAVKKPKLSDAXXXXXXXXXXXXAESKTDDDDDYVPIGQRMKKLTVPDNKSQ-- 948
            V +  QS++KK KLS               E K +DDDD +P+ QR KK     +K +  
Sbjct: 256  VKSLNQSSLKKAKLSSPITSISNKQAAVKPEPKAEDDDDNIPLSQRGKKSQTAASKPKDE 315

Query: 949  ----------------SAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTKVPP 1080
                            S                                      +KVPP
Sbjct: 316  DDDNAPISQRIKKSPASVSKSSAPVKKASTVVSPSLKKVNKKSKKVIKKTAYTKSSKVPP 375

Query: 1081 GSGEGQKWTTLVHSGVIFPPPYKPHGVKMLYNGQPVQLTPEQEEVATMFAVMKDTDYATK 1260
            GSGEGQKWTTLVH+GV+F PPYKPHGVKMLY  QP+ LTPEQEEVATMFAVM DTDY TK
Sbjct: 376  GSGEGQKWTTLVHNGVMFLPPYKPHGVKMLYKXQPLTLTPEQEEVATMFAVMLDTDYMTK 435

Query: 1261 PKFIENFMTDWRPILGKNHVIKKFELCDFTPIYEWHQ 1371
            P+F ENF +DW+ +LGKNH ++  E CDF PIYEWHQ
Sbjct: 436  PRFKENFFSDWKKMLGKNHTVQNLEDCDFGPIYEWHQ 472


>ref|XP_002529020.1| DNA topoisomerase type I, putative [Ricinus communis]
            gi|223531500|gb|EEF33331.1| DNA topoisomerase type I,
            putative [Ricinus communis]
          Length = 891

 Score =  729 bits (1882), Expect(2) = 0.0
 Identities = 360/426 (84%), Positives = 387/426 (90%), Gaps = 1/426 (0%)
 Frame = +2

Query: 1382 MWAIVDGVKEKVGNFRVEPPGLFRGRGEHPKMGKLKRRIRPRDITINIGKDAPIPECPIP 1561
            MWAIVDGVKEKVGNFRVEPP LFRGRGEHPKMGKLK+RI+P DITINIGKDAPIPECPIP
Sbjct: 466  MWAIVDGVKEKVGNFRVEPPALFRGRGEHPKMGKLKKRIQPSDITINIGKDAPIPECPIP 525

Query: 1562 GERWKEVKHDNTVTWLAFWNDPINPKEFKYVFLAASSSLKGQSDKEKYEKARLLKDYIHN 1741
            GE WKEVKHDNTVTWLAFWNDPINPKEFKYVFLAASSSLKGQSDKEKYEKAR LKDYIHN
Sbjct: 526  GESWKEVKHDNTVTWLAFWNDPINPKEFKYVFLAASSSLKGQSDKEKYEKARKLKDYIHN 585

Query: 1742 IRANYTKDFVSKDISKRQIAVATYLIDKLALRAGNEKDDDEADTVGCCTLKVENVSLVPP 1921
            IRA Y KD  SKDI+K+QIAVATYLIDKLALRAGNEKDDDEADTVGCCTLKV NV  +P 
Sbjct: 586  IRAAYQKDLRSKDITKKQIAVATYLIDKLALRAGNEKDDDEADTVGCCTLKVANVECIPG 645

Query: 1922 N-QLQFDFLGKDSIRYFNTVEVELPVYKAIGLFKSGKKDGEDLFDKLDTNKLNAHLKELM 2098
            +  L+FDFLGKDSIRY NTVEV+  VY+AIG F+ GKK  +DLFDKLDT KLNAHLKELM
Sbjct: 646  SFNLKFDFLGKDSIRYENTVEVKPEVYEAIGTFQKGKKQTDDLFDKLDTTKLNAHLKELM 705

Query: 2099 PGLTAKVFRTYNASITLDGMLSNETKAGDVAEKIVIYQHANKEVAIICNHQRSVSKSHTA 2278
            PGLTAKVFRTYNASITLD  L  ET+ GDVAEK+VIYQ ANKEVAIICNHQR++SKSH A
Sbjct: 706  PGLTAKVFRTYNASITLDEKLYEETEDGDVAEKVVIYQRANKEVAIICNHQRTISKSHGA 765

Query: 2279 QMSRLSEKMDELKAVMDELKTDLTRAKKGKPPLKDADGKQKKNLAPEALERKIAQTNAKI 2458
            QMS+L EK++ELKA + ELKTDL RAKKGKPPLKDADGKQK+NL+PE +E+KIA TN +I
Sbjct: 766  QMSKLIEKIEELKATLKELKTDLDRAKKGKPPLKDADGKQKRNLSPENIEKKIASTNQRI 825

Query: 2459 EKMERDMRTKEDLKTVALGTSKINYLDPRISVAWCKRHEVPIEKIFNKSLLAKFAWAMDV 2638
            EKME +M+TKEDLKTVALGTSKINYLDPRI+VAWCKRHEVPIEKIFNKSLLAKF WAMDV
Sbjct: 826  EKMELNMKTKEDLKTVALGTSKINYLDPRITVAWCKRHEVPIEKIFNKSLLAKFTWAMDV 885

Query: 2639 DPSFRF 2656
            DP FRF
Sbjct: 886  DPQFRF 891



 Score =  235 bits (600), Expect(2) = 0.0
 Identities = 170/465 (36%), Positives = 211/465 (45%), Gaps = 22/465 (4%)
 Frame = +1

Query: 43   MAVDTCVKPKFFXXXXXXXE-PIVFKR-NKTISKQNQLNSEIKKP--SSQNDGLSGRH-- 204
            MA     KP  +       + P+VFKR N + +KQNQ N E+KKP  SSQN      +  
Sbjct: 3    MAAPATAKPNIYEYDEDDDDMPLVFKRGNNSTTKQNQSNPEVKKPLLSSQNSNGQSSNAQ 62

Query: 205  ------PRDAVSPNGQNXXXXXXXXXXXXXXXXXXXIGNLKESTSIADXXXXXXXXXXXX 366
                  P    SP                       + N K S+S+ +            
Sbjct: 63   KGKSTVPSLKASPVKSPIGSPKASTSSAKASPLRSPVANSKGSSSLDEQLKQASKQNASN 122

Query: 367  NDAGXXXXXXXXXXXXV--------DSEDSDDDKPLSYRLPIASTTLPKSNSPRVSKGLX 522
                            V        D EDS+DD PLS R         K N+  VSK + 
Sbjct: 123  VVKDVSSAKPEIGLKSVKHETKSNGDDEDSEDDLPLSARR--------KGNTNNVSKVVT 174

Query: 523  XXXXXXXXXEKAKVNXXXXXXXXXXXXXXXXRFKLKS-CGPSSVKKYDSDEEKPLASKIL 699
                                           RF +KS  G S  K  +  E+KPL SK+ 
Sbjct: 175  APKRVKDEDSD------------DDKVPLCSRFPMKSTAGTSGNKPNNISEKKPLPSKVQ 222

Query: 700  QNGSNKRDSELVKSHKVLNKRPLSDVSTSVQSAVKKPKLSDAXXXXXXXXXXXXAESKTD 879
            QNGS  +D +  K+  +  KRPL   ++S QS++KKPKLS              AE   +
Sbjct: 223  QNGSTSKDKQQ-KAPLIPTKRPLDKANSSEQSSIKKPKLSAGSTITKVKQATVKAE---E 278

Query: 880  DDDDYVPIGQRMKKLTVPDNKSQSAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 1059
            DD D +PI QR K L   ++K  SA                                   
Sbjct: 279  DDPDDIPIAQRKKSLGSSESKLSSAKQKAIKVVSSSFKKPIKKNKKQMKNTKYSKS---- 334

Query: 1060 XXTKVPPGSGEGQK-WTTLVHSGVIFPPPYKPHGVKMLYNGQPVQLTPEQEEVATMFAVM 1236
              TKV P S +GQK WTTL+H+GVIFPPPYKPHG+K+LY G+PV L PEQEEVATMFAVM
Sbjct: 335  --TKVQPSSTDGQKKWTTLIHNGVIFPPPYKPHGIKILYKGRPVDLAPEQEEVATMFAVM 392

Query: 1237 KDTDYATKPKFIENFMTDWRPILGKNHVIKKFELCDFTPIYEWHQ 1371
            KDTDY  KPKF+ENF  DWR +LG+NHVI+K E CDFTPIYEWH+
Sbjct: 393  KDTDYMQKPKFLENFWNDWRKLLGRNHVIQKLEDCDFTPIYEWHE 437


>dbj|BAK32956.1| topoisomerase I [Ophiorrhiza fucosa]
          Length = 926

 Score =  721 bits (1861), Expect(2) = 0.0
 Identities = 356/426 (83%), Positives = 388/426 (91%), Gaps = 1/426 (0%)
 Frame = +2

Query: 1382 MWAIVDGVKEKVGNFRVEPPGLFRGRGEHPKMGKLKRRIRPRDITINIGKDAPIPECPIP 1561
            MWAIVDGVKEKVGNFRVEPPGLFRGRGEHPK+GKLK+RI PRDITINIGKDAPIPECPIP
Sbjct: 501  MWAIVDGVKEKVGNFRVEPPGLFRGRGEHPKVGKLKKRIHPRDITINIGKDAPIPECPIP 560

Query: 1562 GERWKEVKHDNTVTWLAFWNDPINPKEFKYVFLAASSSLKGQSDKEKYEKARLLKDYIHN 1741
            GERWKEV++DNTVTWLA+WNDP+N KE KYVFLA SS+LKGQSDKEKYEKARLLKDYIH 
Sbjct: 561  GERWKEVRNDNTVTWLAYWNDPVNLKECKYVFLAPSSTLKGQSDKEKYEKARLLKDYIHG 620

Query: 1742 IRANYTKDFVS-KDISKRQIAVATYLIDKLALRAGNEKDDDEADTVGCCTLKVENVSLVP 1918
            IRA YTKDF + KD  K+QIAVATYLIDKLALRAGNEKDDDEADTVGCCTLKVENV  VP
Sbjct: 621  IRAAYTKDFTNNKDPMKKQIAVATYLIDKLALRAGNEKDDDEADTVGCCTLKVENVEPVP 680

Query: 1919 PNQLQFDFLGKDSIRYFNTVEVELPVYKAIGLFKSGKKDGEDLFDKLDTNKLNAHLKELM 2098
            PN L+ DF+GKDSIRY N V+VE  V+KAI  F+SGK+  EDLFD+LDT+KLNAHLKELM
Sbjct: 681  PNILKIDFIGKDSIRYQNEVQVEPAVFKAIQQFRSGKEGSEDLFDRLDTSKLNAHLKELM 740

Query: 2099 PGLTAKVFRTYNASITLDGMLSNETKAGDVAEKIVIYQHANKEVAIICNHQRSVSKSHTA 2278
            PGLTAKVFRTYNASITLD MLS ETK G VAEK+ +YQHANKEVAIICNHQR+VSKSH+A
Sbjct: 741  PGLTAKVFRTYNASITLDDMLSKETKGGKVAEKVGVYQHANKEVAIICNHQRTVSKSHSA 800

Query: 2279 QMSRLSEKMDELKAVMDELKTDLTRAKKGKPPLKDADGKQKKNLAPEALERKIAQTNAKI 2458
            QMSRL+EK+DELK  ++ELKTDL+RAKKGKPP K  DG+ K+NL PEALERKIAQTNAKI
Sbjct: 801  QMSRLNEKIDELKTALEELKTDLSRAKKGKPPSKGDDGEPKRNLNPEALERKIAQTNAKI 860

Query: 2459 EKMERDMRTKEDLKTVALGTSKINYLDPRISVAWCKRHEVPIEKIFNKSLLAKFAWAMDV 2638
            EKMERD +TKEDLK VAL TSKI+YLDPRI+VAWCKR EVPIEK+FNKSLLAKFAWAMDV
Sbjct: 861  EKMERDKKTKEDLKAVALSTSKISYLDPRITVAWCKRQEVPIEKMFNKSLLAKFAWAMDV 920

Query: 2639 DPSFRF 2656
            DPSFRF
Sbjct: 921  DPSFRF 926



 Score =  237 bits (605), Expect(2) = 0.0
 Identities = 144/337 (42%), Positives = 170/337 (50%), Gaps = 19/337 (5%)
 Frame = +1

Query: 418  DSEDSDDDKPLSYRLPIASTTLPKSNSPRVSKGLXXXXXXXXXXEKAKVNXXXXXXXXXX 597
            +SE SDD+KPL  R    S+   KSN      G           E               
Sbjct: 146  NSESSDDEKPLIARTSGCSSK-GKSNHANKEGGDSCSIRRPVVEESEDSEDEKPLSR--- 201

Query: 598  XXXXXXRFKLKSC-GPSSVKKYDSDEEKPLASKILQNGSNKRDSELVKSHKVLNKRPLSD 774
                  RF  KS  G S+ K YDSDE+KPLA+K+ QNGS  RD  + KS  + NKR   +
Sbjct: 202  ------RFPSKSSLGESTSKSYDSDEKKPLAAKVQQNGSASRDGPMNKSASLSNKRAPGE 255

Query: 775  VSTSVQSAVKKPKLSDAXXXXXXXXXXXXAESKTDDDDDYVPIGQRMKKLTVPDNKSQ-- 948
            V +  QS++KKPKLS               E K +DDDD +P+ QR KK     +K +  
Sbjct: 256  VKSLNQSSLKKPKLSSPITSISNKQAAVKPEPKAEDDDDNIPLSQRGKKSQTAASKPKDE 315

Query: 949  ----------------SAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTKVPP 1080
                            S                                      +KVPP
Sbjct: 316  DDDNAPISQRIKKSPASVSKSSAPVKKASTVVSPSLKKVNKKSKKVIKKTAYTKSSKVPP 375

Query: 1081 GSGEGQKWTTLVHSGVIFPPPYKPHGVKMLYNGQPVQLTPEQEEVATMFAVMKDTDYATK 1260
            GSGEGQKWTTLVH+GV+FPPPYKPHGVKMLY  QP+ LTPEQEEVATMFA M DTDY  K
Sbjct: 376  GSGEGQKWTTLVHNGVMFPPPYKPHGVKMLYKRQPLTLTPEQEEVATMFAAMLDTDYMNK 435

Query: 1261 PKFIENFMTDWRPILGKNHVIKKFELCDFTPIYEWHQ 1371
            P+F ENF +DW+ ILGKNH I+  E CDF PIYEWHQ
Sbjct: 436  PRFKENFFSDWKKILGKNHTIQNLEDCDFGPIYEWHQ 472


>ref|XP_007201211.1| hypothetical protein PRUPE_ppa001622mg [Prunus persica]
            gi|462396611|gb|EMJ02410.1| hypothetical protein
            PRUPE_ppa001622mg [Prunus persica]
          Length = 790

 Score =  742 bits (1916), Expect(2) = 0.0
 Identities = 358/425 (84%), Positives = 394/425 (92%)
 Frame = +2

Query: 1382 MWAIVDGVKEKVGNFRVEPPGLFRGRGEHPKMGKLKRRIRPRDITINIGKDAPIPECPIP 1561
            MWA+VDGVKEKVGNFRVEPPGLFRGRGEHPK GKLKRRIRP D+TINIGKDAPIPECPIP
Sbjct: 366  MWAVVDGVKEKVGNFRVEPPGLFRGRGEHPKSGKLKRRIRPSDVTINIGKDAPIPECPIP 425

Query: 1562 GERWKEVKHDNTVTWLAFWNDPINPKEFKYVFLAASSSLKGQSDKEKYEKARLLKDYIHN 1741
            GE WKEV+HDNTVTWLAFWNDPIN +EFKYVFLA SSSLKGQSDKEKYEKAR+LKDYI N
Sbjct: 426  GESWKEVRHDNTVTWLAFWNDPINQREFKYVFLAPSSSLKGQSDKEKYEKARMLKDYIGN 485

Query: 1742 IRANYTKDFVSKDISKRQIAVATYLIDKLALRAGNEKDDDEADTVGCCTLKVENVSLVPP 1921
            IRA YT+DF SKD +KRQIAVATYLIDKLALRAGNEKDDDEADTVGCCTLKVENV  + P
Sbjct: 486  IRAAYTRDFTSKDGTKRQIAVATYLIDKLALRAGNEKDDDEADTVGCCTLKVENVKAIAP 545

Query: 1922 NQLQFDFLGKDSIRYFNTVEVELPVYKAIGLFKSGKKDGEDLFDKLDTNKLNAHLKELMP 2101
            N L+F+FLGKDSIRY NTVEVE+PVYKAI  F++GK+  +DLFD+LDT+KLNAHLKELMP
Sbjct: 546  NSLEFNFLGKDSIRYENTVEVEIPVYKAIIQFQTGKRGCDDLFDRLDTSKLNAHLKELMP 605

Query: 2102 GLTAKVFRTYNASITLDGMLSNETKAGDVAEKIVIYQHANKEVAIICNHQRSVSKSHTAQ 2281
            GLTAKVFRTYNASITLD +L+ ETK GD++EK+V+YQHANKEVAIICNHQR++SK+H+AQ
Sbjct: 606  GLTAKVFRTYNASITLDNILNKETKEGDLSEKVVVYQHANKEVAIICNHQRTISKTHSAQ 665

Query: 2282 MSRLSEKMDELKAVMDELKTDLTRAKKGKPPLKDADGKQKKNLAPEALERKIAQTNAKIE 2461
            MSRL EK+  L++++ ELKTDL RAKKG+PPLKDADGKQK+NL PEALERKIAQT  KIE
Sbjct: 666  MSRLLEKIGNLQSILKELKTDLDRAKKGRPPLKDADGKQKRNLTPEALERKIAQTTVKIE 725

Query: 2462 KMERDMRTKEDLKTVALGTSKINYLDPRISVAWCKRHEVPIEKIFNKSLLAKFAWAMDVD 2641
            KME DMRTKEDLKTVALGTSKINYLDPRI+VAWCKRHEVPIEKIFNKSLLAKFAW+MDVD
Sbjct: 726  KMELDMRTKEDLKTVALGTSKINYLDPRITVAWCKRHEVPIEKIFNKSLLAKFAWSMDVD 785

Query: 2642 PSFRF 2656
            P FRF
Sbjct: 786  PDFRF 790



 Score =  216 bits (550), Expect(2) = 0.0
 Identities = 117/253 (46%), Positives = 147/253 (58%), Gaps = 1/253 (0%)
 Frame = +1

Query: 616  RFKLKSCGPSSVKKYDSDEEKPLASKILQNGSNKRDSELVKSHKVLNKRPLSDVSTSVQS 795
            R   K  G S  +  DS E KP+ASK+ +N S+  D     S+ +  KRPL   + S +S
Sbjct: 93   RITPKKVGTSGSQPCDSKERKPVASKVQKNCSSTTDKGKT-SYVISTKRPLDKANISEKS 151

Query: 796  AVKKPKLSDAXXXXXXXXXXXXAESKTDDDDDYVPIGQRMKKLTVPDNKSQSAXXXXXXX 975
            + K+PK+SD+             E K +DDDD++PI QR+KK T  DNKS          
Sbjct: 152  SAKRPKVSDSSTSIKNMQVSAKKEPKGEDDDDFIPISQRIKKAT-SDNKSPVTKQKLTKV 210

Query: 976  XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTKVPPGSGEGQK-WTTLVHSGVIFPPPYKP 1152
                                          T VPP S +GQK WT+LVH+GVIFPPPYKP
Sbjct: 211  RPSSIKKKIKKGQKASQFSKYSKS------TTVPPSSNDGQKKWTSLVHNGVIFPPPYKP 264

Query: 1153 HGVKMLYNGQPVQLTPEQEEVATMFAVMKDTDYATKPKFIENFMTDWRPILGKNHVIKKF 1332
            HGVKMLY+G+PV L+PEQEEVATM+AVMKDTDY  K  F  NF  DW  +LGKNH+I+K 
Sbjct: 265  HGVKMLYSGKPVTLSPEQEEVATMYAVMKDTDYVQKQTFRNNFWNDWHKLLGKNHIIQKL 324

Query: 1333 ELCDFTPIYEWHQ 1371
            + CDFTPIY+W+Q
Sbjct: 325  DACDFTPIYDWYQ 337