BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Akebia27_contig00002064
         (2216 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004308764.1| PREDICTED: 5'-3' exoribonuclease 3-like [Fra...   511   e-142
ref|XP_006645090.1| PREDICTED: 5'-3' exoribonuclease 3-like isof...   491   e-136
ref|XP_006645089.1| PREDICTED: 5'-3' exoribonuclease 3-like isof...   491   e-136
gb|EAY76660.1| hypothetical protein OsI_04616 [Oryza sativa Indi...   489   e-135
ref|NP_001044947.1| Os01g0872700 [Oryza sativa Japonica Group] g...   489   e-135
dbj|BAB86550.1| putative 5-3 exoribonuclease [Oryza sativa Japon...   487   e-134
ref|XP_004967802.1| PREDICTED: 5'-3' exoribonuclease 3-like isof...   486   e-134
ref|XP_004967801.1| PREDICTED: 5'-3' exoribonuclease 3-like isof...   486   e-134
ref|XP_004967800.1| PREDICTED: 5'-3' exoribonuclease 3-like isof...   486   e-134
gb|AFW61091.1| hypothetical protein ZEAMMB73_651968 [Zea mays]        485   e-134
ref|XP_002306919.2| EXORIBONUCLEASE 2 family protein [Populus tr...   484   e-134
ref|XP_002457601.1| hypothetical protein SORBIDRAFT_03g010040 [S...   484   e-134
tpg|DAA54014.1| TPA: hypothetical protein ZEAMMB73_402768 [Zea m...   483   e-133
ref|XP_004972700.1| PREDICTED: 5'-3' exoribonuclease 3-like isof...   483   e-133
ref|XP_002523870.1| 5'->3' exoribonuclease, putative [Ricinus co...   482   e-133
ref|XP_002280236.2| PREDICTED: 5'-3' exoribonuclease 3-like [Vit...   481   e-133
emb|CBI19841.3| unnamed protein product [Vitis vinifera]              481   e-133
ref|XP_007017771.1| 5'-3' exoribonuclease 3 isoform 1 [Theobroma...   481   e-133
ref|XP_003564736.1| PREDICTED: 5'-3' exoribonuclease 3-like [Bra...   478   e-132
ref|NP_565114.1| 5'-3' exoribonuclease 3 [Arabidopsis thaliana] ...   477   e-132

>ref|XP_004308764.1| PREDICTED: 5'-3' exoribonuclease 3-like [Fragaria vesca subsp. vesca]
          Length = 968

 Score =  511 bits (1315), Expect = e-142
 Identities = 302/706 (42%), Positives = 408/706 (57%), Gaps = 10/706 (1%)
 Frame = +3

Query: 3    GLDADLIMLALATHEVHFSILREDVHAEEQRPISIQALESSLAEFNFSAKVNTIIRGQSL 182
            GLDADLIML+LATHEVHFSILRED+  + Q+P +   L +S  +           R   +
Sbjct: 225  GLDADLIMLSLATHEVHFSILREDLLLQNQQPYANGQLTASSDK-----------RKAYM 273

Query: 183  VKKPYQFVNIWTLREYLELDLKIYDPP--FVIDLERIVDDFILICFFTGNDFLPHMPTLE 356
            +KKPYQF++IW LREYLELD++I DPP  F  DLERI+DDFI ICFF GNDFLPHMPTLE
Sbjct: 274  MKKPYQFLHIWILREYLELDMQINDPPENFKFDLERIIDDFIFICFFAGNDFLPHMPTLE 333

Query: 357  IREGAIDLLMSVYRDEFKKFGGYLVDMQKAKDRKAAYVNLKRMEKFILAVGTFEDRIFKK 536
            I EGAIDLLM VY+ EFKK GGYLVDM +  D+K  Y+ L R+EKFIL +G +E++IFKK
Sbjct: 334  IHEGAIDLLMQVYKKEFKKIGGYLVDMIRVHDKKLGYIKLSRVEKFILLIGAYEEKIFKK 393

Query: 537  RMDLRQRMIKRLLRENAKVIDDQDFEQETPVFQSMIGYLEPKRRNWFCNPVDSTLTSKAK 716
            R D+R R ++          +D   E+E                    +   ST   KA 
Sbjct: 394  RSDIRDRKLRGFCN------NDDTIEEE-------------------IDAGSSTSNVKAI 428

Query: 717  SGCYQTSSGITSNNEDDIVRENTKELEQKLKDFIREKSDLYKQGG-LERDRVKLGMHGWK 893
             G    S+   S++E   + ENTKE +QKLK  IR KSDL++ G     D+V+LG  G+K
Sbjct: 429  EGSAVVSADNLSSSE---IAENTKEYKQKLKASIRRKSDLFRNGDHFGTDKVRLGATGFK 485

Query: 894  ERYYEKNFSAKSPKDVEATCKEIVKKYIEGLCWVLQYYFLGVRXXXXXXXXXXXXFASDL 1073
            ERYY+  FSA++P ++E   KE+VK Y EGL WVL YYF G              FASD+
Sbjct: 486  ERYYKYKFSAETPGEIECKRKEVVKCYTEGLLWVLLYYFSGPPSWKWFYPFHYGPFASDM 545

Query: 1074 KGLSTISISFEMGAPFKPFDQLMGVLPPRSVSALPKPYWNLMISEESNLAEFYPTDFDVD 1253
            KGL+ +   FE G+PFKP D LM VLPPRS  ALP+ Y  LM+ + S++ EFYP+DF+VD
Sbjct: 546  KGLAQVKPQFEKGSPFKPIDTLMAVLPPRSAHALPEDYRALMMEDCSSIIEFYPSDFEVD 605

Query: 1254 IEGKRYLWQGIVKLPFINEDLLLSETKKCENELKEDEAKRNSEAMNKLFVMRSHVLGSSI 1433
            ++GKR+ WQGI KLPFI+E  LL ET+K E ELK +E +RN+E +++LF+  SH++ S I
Sbjct: 606  MDGKRFTWQGISKLPFIDESRLLHETRKLEKELKGEEIERNAEKLDRLFIRSSHIMASQI 665

Query: 1434 SSFYXXXXXXXXXXXXXELIDPHLSGGMNGFICPCDDDLGLANSVFGLKGREEDVVKDDV 1613
             S                 IDP+LS G++ FI   DD+         +KG ++   +D V
Sbjct: 666  VSLTNGGNQSIK-------IDPNLSFGISDFIRQLDDNDA------KVKG-DDSSEEDPV 711

Query: 1614 ICVRYECPDNHPHIPRPPMEVTFPEKTITEADIEKQPLWHEYEGHKPPNRLQI-QHNCRT 1790
            +C  YE P+   H+PR    +  P KTI E ++ +  LWHE +G+   + LQ  Q   + 
Sbjct: 712  LCALYELPNTSLHMPRLLDGLQLPPKTINECELLETVLWHECQGNATTHSLQQGQARFKK 771

Query: 1791 AINGGKFTLPNS------SSDREVWKGASSGFSAGRGKGYSETSNSHLYYESYSGIRAVD 1952
              + G  +  N+      S    + K A SG+  GRG+    TS      ++Y+      
Sbjct: 772  PNDFGNISFQNNTRLTSGSPANSIHKFAGSGWGCGRGRANGSTSGD----QNYAPKTTSS 827

Query: 1953 NQKLISTISTSASVKWVSGRGKGYTESSSYTNQNFARGGQGWSRGG 2090
            +Q+ +S+ S+  +    S      T    + N   +  GQGW   G
Sbjct: 828  DQREVSSSSSYYAKGTTSDHKNEGTLQHGFRNLKISDSGQGWRPTG 873


>ref|XP_006645090.1| PREDICTED: 5'-3' exoribonuclease 3-like isoform X2 [Oryza
            brachyantha]
          Length = 858

 Score =  491 bits (1263), Expect = e-136
 Identities = 295/656 (44%), Positives = 379/656 (57%), Gaps = 31/656 (4%)
 Frame = +3

Query: 3    GLDADLIMLALATHEVHFSILREDVHAEEQRPISIQALESSLAEFNFSAKVNTII----- 167
            GLDADLIMLALATHEVHFSILRE V+   Q+       +      N   K          
Sbjct: 23   GLDADLIMLALATHEVHFSILREVVYTPGQQDKCFLCGQVGHLAANCEGKPKRKAGEFDE 82

Query: 168  RGQSLV-KKPYQFVNIWTLREYLELDLKIYDPPFVIDLERIVDDFILICFFTGNDFLPHM 344
            +G ++V KKPYQF+NIWTLREYLE + ++ +PPF ID ERIVDDFI +CFF GNDFLPHM
Sbjct: 83   KGDAIVPKKPYQFLNIWTLREYLEYEFRMPNPPFPIDFERIVDDFIFMCFFVGNDFLPHM 142

Query: 345  PTLEIREGAIDLLMSVYRDEFKKFGGYLVDMQKAKDRKAAYVNLKRMEKFILAVGTFEDR 524
            PTLEIREGAI+LLM+VY+ EF   GGYL D        A+  +L ++E FI AVG++ED+
Sbjct: 143  PTLEIREGAINLLMAVYKKEFPSMGGYLTD--------ASTPDLNKVEHFIQAVGSYEDK 194

Query: 525  IFKKRMDLRQRMIKRLLRENAKVIDDQDFEQET------PV--FQSMIGYLEPKRRNWFC 680
            IF+KR  L QR  +R+ RE A+     D +         PV  FQ       P    +  
Sbjct: 195  IFQKRARLHQRQAERIKREKAQAKRGDDLDPHVKDDLIVPVARFQGSRLASGPVPSPYEQ 254

Query: 681  NPVDSTL---TSKAKSGCYQTSSGIT--------SNNEDDIVRENTKELEQKLKDFIREK 827
            N  D       S+A+     +SSG +         N+ +   REN ++L+  LKD +REK
Sbjct: 255  NGTDKNKGGKNSRAQKAARVSSSGSSIAAAIVEAENDLEAQERENKEDLKTMLKDALREK 314

Query: 828  SDLYKQGGLERDRVKLGMHGWKERYYEKNFSAKSPKDVEATCKEIVKKYIEGLCWVLQYY 1007
            SD++     E D+VKLG  GW+ERYYE+ F A++P+ +E   +++V KY EGLCWV+ YY
Sbjct: 315  SDVFNSENPEEDKVKLGQPGWRERYYEEKFGARTPRQIEEIRRDVVLKYTEGLCWVMHYY 374

Query: 1008 FLGVRXXXXXXXXXXXXFASDLKGLSTISISFEMGAPFKPFDQLMGVLPPRSVSALPKPY 1187
            + GV             FASDL GL  ++ISFE+G+PFKPFDQLMGV P  S  ALP  Y
Sbjct: 375  YEGVCSWQWFYPYHYAPFASDLSGLGQLNISFELGSPFKPFDQLMGVFPAASSHALPVKY 434

Query: 1188 WNLMISEESNLAEFYPTDFDVDIEGKRYLWQGIVKLPFINEDLLLSETKKCENELKEDEA 1367
              LM    S + +FYPTDF+VD+ GKRY WQGI KLPFI+E  LL+E KK E+ L  +EA
Sbjct: 435  RQLMTDPNSPIIDFYPTDFEVDMNGKRYSWQGIAKLPFIDEARLLAEIKKVEHTLTPEEA 494

Query: 1368 KRNSEAMNKLFVMRSHVLGSSISSF--YXXXXXXXXXXXXXELIDPHLSGGMNGFICPCD 1541
            +RNS   N LFV  SH L   I S                 E IDP  SGGMNG+I  C+
Sbjct: 495  RRNSIMFNMLFVNGSHPLSPYIYSLNSKFGHLPNKERNAIKEKIDPSSSGGMNGYISLCN 554

Query: 1542 DD---LGLANSVFGLKGREEDVVKDDVICVRYECPDNHPHIPRPPMEVTFPEKTITEADI 1712
             D       + V GL    ED++ + VIC  Y+ PD+H HI RPP+ V  P+KT+   D+
Sbjct: 555  GDPCPPVFRSPVDGL----EDIMDNQVICTIYKLPDSHKHIARPPVGVIIPKKTVEATDL 610

Query: 1713 EKQP-LWHEYEGHKPPNRLQIQHNCRTAINGGKFTLPNSSSDREVWKGASSGFSAG 1877
            +  P LWHE  G +P +     +N R          P  +S+R+   GA SG   G
Sbjct: 611  KPPPVLWHEDSGRRPYD----NNNRR----------PYENSNRQNPAGAISGHQLG 652


>ref|XP_006645089.1| PREDICTED: 5'-3' exoribonuclease 3-like isoform X1 [Oryza
            brachyantha]
          Length = 1066

 Score =  491 bits (1263), Expect = e-136
 Identities = 295/656 (44%), Positives = 379/656 (57%), Gaps = 31/656 (4%)
 Frame = +3

Query: 3    GLDADLIMLALATHEVHFSILREDVHAEEQRPISIQALESSLAEFNFSAKVNTII----- 167
            GLDADLIMLALATHEVHFSILRE V+   Q+       +      N   K          
Sbjct: 231  GLDADLIMLALATHEVHFSILREVVYTPGQQDKCFLCGQVGHLAANCEGKPKRKAGEFDE 290

Query: 168  RGQSLV-KKPYQFVNIWTLREYLELDLKIYDPPFVIDLERIVDDFILICFFTGNDFLPHM 344
            +G ++V KKPYQF+NIWTLREYLE + ++ +PPF ID ERIVDDFI +CFF GNDFLPHM
Sbjct: 291  KGDAIVPKKPYQFLNIWTLREYLEYEFRMPNPPFPIDFERIVDDFIFMCFFVGNDFLPHM 350

Query: 345  PTLEIREGAIDLLMSVYRDEFKKFGGYLVDMQKAKDRKAAYVNLKRMEKFILAVGTFEDR 524
            PTLEIREGAI+LLM+VY+ EF   GGYL D        A+  +L ++E FI AVG++ED+
Sbjct: 351  PTLEIREGAINLLMAVYKKEFPSMGGYLTD--------ASTPDLNKVEHFIQAVGSYEDK 402

Query: 525  IFKKRMDLRQRMIKRLLRENAKVIDDQDFEQET------PV--FQSMIGYLEPKRRNWFC 680
            IF+KR  L QR  +R+ RE A+     D +         PV  FQ       P    +  
Sbjct: 403  IFQKRARLHQRQAERIKREKAQAKRGDDLDPHVKDDLIVPVARFQGSRLASGPVPSPYEQ 462

Query: 681  NPVDSTL---TSKAKSGCYQTSSGIT--------SNNEDDIVRENTKELEQKLKDFIREK 827
            N  D       S+A+     +SSG +         N+ +   REN ++L+  LKD +REK
Sbjct: 463  NGTDKNKGGKNSRAQKAARVSSSGSSIAAAIVEAENDLEAQERENKEDLKTMLKDALREK 522

Query: 828  SDLYKQGGLERDRVKLGMHGWKERYYEKNFSAKSPKDVEATCKEIVKKYIEGLCWVLQYY 1007
            SD++     E D+VKLG  GW+ERYYE+ F A++P+ +E   +++V KY EGLCWV+ YY
Sbjct: 523  SDVFNSENPEEDKVKLGQPGWRERYYEEKFGARTPRQIEEIRRDVVLKYTEGLCWVMHYY 582

Query: 1008 FLGVRXXXXXXXXXXXXFASDLKGLSTISISFEMGAPFKPFDQLMGVLPPRSVSALPKPY 1187
            + GV             FASDL GL  ++ISFE+G+PFKPFDQLMGV P  S  ALP  Y
Sbjct: 583  YEGVCSWQWFYPYHYAPFASDLSGLGQLNISFELGSPFKPFDQLMGVFPAASSHALPVKY 642

Query: 1188 WNLMISEESNLAEFYPTDFDVDIEGKRYLWQGIVKLPFINEDLLLSETKKCENELKEDEA 1367
              LM    S + +FYPTDF+VD+ GKRY WQGI KLPFI+E  LL+E KK E+ L  +EA
Sbjct: 643  RQLMTDPNSPIIDFYPTDFEVDMNGKRYSWQGIAKLPFIDEARLLAEIKKVEHTLTPEEA 702

Query: 1368 KRNSEAMNKLFVMRSHVLGSSISSF--YXXXXXXXXXXXXXELIDPHLSGGMNGFICPCD 1541
            +RNS   N LFV  SH L   I S                 E IDP  SGGMNG+I  C+
Sbjct: 703  RRNSIMFNMLFVNGSHPLSPYIYSLNSKFGHLPNKERNAIKEKIDPSSSGGMNGYISLCN 762

Query: 1542 DD---LGLANSVFGLKGREEDVVKDDVICVRYECPDNHPHIPRPPMEVTFPEKTITEADI 1712
             D       + V GL    ED++ + VIC  Y+ PD+H HI RPP+ V  P+KT+   D+
Sbjct: 763  GDPCPPVFRSPVDGL----EDIMDNQVICTIYKLPDSHKHIARPPVGVIIPKKTVEATDL 818

Query: 1713 EKQP-LWHEYEGHKPPNRLQIQHNCRTAINGGKFTLPNSSSDREVWKGASSGFSAG 1877
            +  P LWHE  G +P +     +N R          P  +S+R+   GA SG   G
Sbjct: 819  KPPPVLWHEDSGRRPYD----NNNRR----------PYENSNRQNPAGAISGHQLG 860


>gb|EAY76660.1| hypothetical protein OsI_04616 [Oryza sativa Indica Group]
          Length = 1068

 Score =  489 bits (1260), Expect = e-135
 Identities = 294/656 (44%), Positives = 378/656 (57%), Gaps = 31/656 (4%)
 Frame = +3

Query: 3    GLDADLIMLALATHEVHFSILREDVHAEEQRPISIQALESSLAEFNFSAKVNTII----- 167
            GLDADLIMLALATHEVHFSILRE V+   Q+       +      N   KV         
Sbjct: 231  GLDADLIMLALATHEVHFSILREVVYTPGQQDKCFLCGQVGHLAANCEGKVKRKAGEFDE 290

Query: 168  RGQSLV-KKPYQFVNIWTLREYLELDLKIYDPPFVIDLERIVDDFILICFFTGNDFLPHM 344
            +G+++V KKPYQF+NIWTLREYLE + ++ +PPF ID ERIVDDFI +CFF GNDFLPHM
Sbjct: 291  KGEAIVPKKPYQFLNIWTLREYLEYEFRMQNPPFPIDFERIVDDFIFMCFFVGNDFLPHM 350

Query: 345  PTLEIREGAIDLLMSVYRDEFKKFGGYLVDMQKAKDRKAAYVNLKRMEKFILAVGTFEDR 524
            PTLEIREGAI+LLM+VY+ EF   GGYL D        A   +L ++E FI AVG++ED+
Sbjct: 351  PTLEIREGAINLLMAVYKKEFPSMGGYLTD--------ACTPDLNKVEHFIQAVGSYEDK 402

Query: 525  IFKKRMDLRQRMIKRLLRENAKVIDDQDFEQET------PV--FQSMIGYLEPKRRNWFC 680
            IF+KR  L QR  +R+ RE A+     D +         PV  FQ       P    +  
Sbjct: 403  IFQKRARLHQRQAERIKREKAQAKRGDDLDPHVRDDLIVPVARFQGSRLASGPAPSPYEQ 462

Query: 681  NPVDST---LTSKAKSGCYQTSSGIT--------SNNEDDIVRENTKELEQKLKDFIREK 827
            N  D       S+A+     +SSG +         N+ +   REN ++L+  LKD +REK
Sbjct: 463  NGSDKNNGGKNSRARKAARVSSSGSSIAAAIVEAENDLEAQERENKEDLKTMLKDALREK 522

Query: 828  SDLYKQGGLERDRVKLGMHGWKERYYEKNFSAKSPKDVEATCKEIVKKYIEGLCWVLQYY 1007
            SD++     E D++KLG  GW+ERYYE+ F A++P  +E   +++V KY EGLCWV+ YY
Sbjct: 523  SDVFNSENPEEDKIKLGEPGWRERYYEEKFGARTPGQIEEIRRDVVLKYTEGLCWVMHYY 582

Query: 1008 FLGVRXXXXXXXXXXXXFASDLKGLSTISISFEMGAPFKPFDQLMGVLPPRSVSALPKPY 1187
            + GV             FASDL GL  ++I+FE+G+PFKPFDQLMGV P  S  ALP  Y
Sbjct: 583  YEGVCSWQWFYPYHYAPFASDLSGLGQLNITFELGSPFKPFDQLMGVFPAASSHALPVQY 642

Query: 1188 WNLMISEESNLAEFYPTDFDVDIEGKRYLWQGIVKLPFINEDLLLSETKKCENELKEDEA 1367
              LM    S + +FYPTDF+VD+ GKRY WQGI KLPFI+E  LL+E KK E+ L  +EA
Sbjct: 643  RQLMTDANSPIIDFYPTDFEVDMNGKRYSWQGIAKLPFIDEARLLAEIKKVEHTLTPEEA 702

Query: 1368 KRNSEAMNKLFVMRSHVLGSSISSF--YXXXXXXXXXXXXXELIDPHLSGGMNGFICPCD 1541
            +RNS   N LFV  SH L   I S                 E IDP  SGGMNG+I  C 
Sbjct: 703  RRNSIMFNMLFVNGSHPLSPYIYSLNSKFGHLPDRERNEIKEKIDPSSSGGMNGYISLCS 762

Query: 1542 DD---LGLANSVFGLKGREEDVVKDDVICVRYECPDNHPHIPRPPMEVTFPEKTITEADI 1712
             D       + V GL    ED++ + VIC  Y+ PD+H HI RPP+ V  P+KT+   D+
Sbjct: 763  GDPCPPVFRSPVDGL----EDIMDNQVICTIYKLPDSHKHIARPPVGVIIPKKTVEATDL 818

Query: 1713 EKQP-LWHEYEGHKPPNRLQIQHNCRTAINGGKFTLPNSSSDREVWKGASSGFSAG 1877
            +  P LWHE  G +P +     +N R          P  +S+R+   GA SG   G
Sbjct: 819  KPPPVLWHEDSGRRPHD----NNNRR----------PYENSNRQNPAGAISGRQLG 860


>ref|NP_001044947.1| Os01g0872700 [Oryza sativa Japonica Group]
            gi|56785082|dbj|BAD82721.1| putative 5'-3'
            exoribonuclease (XRN3) [Oryza sativa Japonica Group]
            gi|113534478|dbj|BAF06861.1| Os01g0872700 [Oryza sativa
            Japonica Group] gi|215713440|dbj|BAG94577.1| unnamed
            protein product [Oryza sativa Japonica Group]
          Length = 1068

 Score =  489 bits (1259), Expect = e-135
 Identities = 294/656 (44%), Positives = 378/656 (57%), Gaps = 31/656 (4%)
 Frame = +3

Query: 3    GLDADLIMLALATHEVHFSILREDVHAEEQRPISIQALESSLAEFNFSAKVNTII----- 167
            GLDADLIMLALATHEVHFSILRE V+   Q+       +      N   KV         
Sbjct: 231  GLDADLIMLALATHEVHFSILREVVYTPGQQDKCFLCGQVGHLAANCEGKVKRKAGEFDE 290

Query: 168  RGQSLV-KKPYQFVNIWTLREYLELDLKIYDPPFVIDLERIVDDFILICFFTGNDFLPHM 344
            +G+++V KKPYQF+NIWTLREYLE + ++ +PPF ID ERIVDDFI +CFF GNDFLPHM
Sbjct: 291  KGEAIVPKKPYQFLNIWTLREYLEYEFRMQNPPFPIDFERIVDDFIFMCFFVGNDFLPHM 350

Query: 345  PTLEIREGAIDLLMSVYRDEFKKFGGYLVDMQKAKDRKAAYVNLKRMEKFILAVGTFEDR 524
            PTLEIREGAI+LLM+VY+ EF   GGYL D        A   +L ++E FI AVG++ED+
Sbjct: 351  PTLEIREGAINLLMAVYKKEFPSMGGYLTD--------ACTPDLNKVEHFIQAVGSYEDK 402

Query: 525  IFKKRMDLRQRMIKRLLRENAKVIDDQDFEQET------PV--FQSMIGYLEPKRRNWFC 680
            IF+KR  L QR  +R+ RE A+     D +         PV  FQ       P    +  
Sbjct: 403  IFQKRARLHQRQAERIKREKAQAKRGDDLDPHVRDDLIVPVARFQGSRLASGPVPSPYEQ 462

Query: 681  NPVDST---LTSKAKSGCYQTSSGIT--------SNNEDDIVRENTKELEQKLKDFIREK 827
            N  D       S+A+     +SSG +         N+ +   REN ++L+  LKD +REK
Sbjct: 463  NGSDKNNGGKNSRARKAARVSSSGSSIAAAIVEAENDLEAQERENKEDLKTMLKDALREK 522

Query: 828  SDLYKQGGLERDRVKLGMHGWKERYYEKNFSAKSPKDVEATCKEIVKKYIEGLCWVLQYY 1007
            SD++     E D++KLG  GW+ERYYE+ F A++P  +E   +++V KY EGLCWV+ YY
Sbjct: 523  SDVFNSENPEEDKIKLGEPGWRERYYEEKFGARTPGQIEEIRRDVVLKYTEGLCWVMHYY 582

Query: 1008 FLGVRXXXXXXXXXXXXFASDLKGLSTISISFEMGAPFKPFDQLMGVLPPRSVSALPKPY 1187
            + GV             FASDL GL  ++I+FE+G+PFKPFDQLMGV P  S  ALP  Y
Sbjct: 583  YEGVCSWQWFYPYHYAPFASDLSGLGQLNITFELGSPFKPFDQLMGVFPAASSHALPVQY 642

Query: 1188 WNLMISEESNLAEFYPTDFDVDIEGKRYLWQGIVKLPFINEDLLLSETKKCENELKEDEA 1367
              LM    S + +FYPTDF+VD+ GKRY WQGI KLPFI+E  LL+E KK E+ L  +EA
Sbjct: 643  RQLMTDANSPIIDFYPTDFEVDMNGKRYSWQGIAKLPFIDEARLLAEIKKVEHTLTPEEA 702

Query: 1368 KRNSEAMNKLFVMRSHVLGSSISSF--YXXXXXXXXXXXXXELIDPHLSGGMNGFICPCD 1541
            +RNS   N LFV  SH L   I S                 E IDP  SGGMNG+I  C 
Sbjct: 703  RRNSIMFNMLFVNGSHPLSPYIYSLNSKFGHLPDRERNEIKEKIDPSSSGGMNGYISLCS 762

Query: 1542 DD---LGLANSVFGLKGREEDVVKDDVICVRYECPDNHPHIPRPPMEVTFPEKTITEADI 1712
             D       + V GL    ED++ + VIC  Y+ PD+H HI RPP+ V  P+KT+   D+
Sbjct: 763  GDPCPPVFRSPVDGL----EDIMDNQVICTIYKLPDSHKHIARPPVGVIIPKKTVEATDL 818

Query: 1713 EKQP-LWHEYEGHKPPNRLQIQHNCRTAINGGKFTLPNSSSDREVWKGASSGFSAG 1877
            +  P LWHE  G +P +     +N R          P  +S+R+   GA SG   G
Sbjct: 819  KPPPVLWHEDSGRRPHD----NNNRR----------PYENSNRQNPAGAISGRQLG 860


>dbj|BAB86550.1| putative 5-3 exoribonuclease [Oryza sativa Japonica Group]
          Length = 1064

 Score =  487 bits (1253), Expect = e-134
 Identities = 290/634 (45%), Positives = 371/634 (58%), Gaps = 34/634 (5%)
 Frame = +3

Query: 3    GLDADLIMLALATHEVHFSILREDVHAEEQRPISIQALESSLAEFNFSAKVNTII----- 167
            GLDADLIMLALATHEVHFSILRE V+   Q+       +      N   KV         
Sbjct: 231  GLDADLIMLALATHEVHFSILREVVYTPGQQDKCFLCGQVGHLAANCEGKVKRKAGEFDE 290

Query: 168  RGQSLV-KKPYQFVNIWTLREYLELDLKIYDPPFVIDLERIVDDFILICFFTGNDFLPHM 344
            +G+++V KKPYQF+NIWTLREYLE + ++ +PPF ID ERIVDDFI +CFF GNDFLPHM
Sbjct: 291  KGEAIVPKKPYQFLNIWTLREYLEYEFRMQNPPFPIDFERIVDDFIFMCFFVGNDFLPHM 350

Query: 345  PTLEIREGAIDLLMSVYRDEFKKFGGYLVDMQKAKDRKAAYVNLKRMEKFILAVGTFEDR 524
            PTLEIREGAI+LLM+VY+ EF   GGYL D        A   +L ++E FI AVG++ED+
Sbjct: 351  PTLEIREGAINLLMAVYKKEFPSMGGYLTD--------ACTPDLNKVEHFIQAVGSYEDK 402

Query: 525  IFKKRMDLRQRMIKRLLRENAKVIDDQDFEQET------PV--FQSMIGYLEPKRRNWFC 680
            IF+KR  L QR  +R+ RE A+     D +         PV  FQ       P    +  
Sbjct: 403  IFQKRARLHQRQAERIKREKAQAKRGDDLDPHVRDDLIVPVARFQGSRLASGPVPSPYEQ 462

Query: 681  NPVDST---LTSKAKSGCYQTSSGIT--------SNNEDDIVRENTKELEQKLKDFIREK 827
            N  D       S+A+     +SSG +         N+ +   REN ++L+  LKD +REK
Sbjct: 463  NGSDKNNGGKNSRARKAARVSSSGSSIAAAIVEAENDLEAQERENKEDLKTMLKDALREK 522

Query: 828  SDLYKQGGLERDRVKLGMHGWKERYYEKNFSAKSPKDVEATCKEIVKKYIEGLCWVLQYY 1007
            SD++     E D++KLG  GW+ERYYE+ F A++P  +E   +++V KY EGLCWV+ YY
Sbjct: 523  SDVFNSENPEEDKIKLGEPGWRERYYEEKFGARTPGQIEEIRRDVVLKYTEGLCWVMHYY 582

Query: 1008 FLGVRXXXXXXXXXXXXFASDLKGLSTISISFEMGAPFKPFDQLMGVLPPRSVSALPKPY 1187
            + GV             FASDL GL  ++I+FE+G+PFKPFDQLMGV P  S  ALP  Y
Sbjct: 583  YEGVCSWQWFYPYHYAPFASDLSGLGQLNITFELGSPFKPFDQLMGVFPAASSHALPVQY 642

Query: 1188 WNLMISEESNLAEFYPTDFDVDIEGKRYLWQGIVKLPFINEDLLLSETKKCENELKEDEA 1367
              LM    S + +FYPTDF+VD+ GKRY WQGI KLPFI+E  LL+E KK E+ L  +EA
Sbjct: 643  RQLMTDANSPIIDFYPTDFEVDMNGKRYSWQGIAKLPFIDEARLLAEIKKVEHTLTPEEA 702

Query: 1368 KRNSEAMNKLFVMRSHVLGSSISSF--YXXXXXXXXXXXXXELIDPHLSGGMNGFICPCD 1541
            +RNS   N LFV  SH L   I S                 E IDP  SGGMNG+I  C 
Sbjct: 703  RRNSIMFNMLFVNGSHPLSPYIYSLNSKFGHLPDRERNEIKEKIDPSSSGGMNGYISLCS 762

Query: 1542 DD---LGLANSVFGLKGREEDVVKDDVICVRYECPDNHPHIPRPPMEVTFPEKTITEADI 1712
             D       + V GL    ED++ + VIC  Y+ PD+H HI RPP+ V  P+KT+   D+
Sbjct: 763  GDPCPPVFRSPVDGL----EDIMDNQVICTIYKLPDSHKHIARPPVGVIIPKKTVEATDL 818

Query: 1713 EKQP-LWHEYEGHKP-PNRL--QIQHNCRTAING 1802
            +  P LWHE  G +  PN L    + N   AI+G
Sbjct: 819  KPPPVLWHEDSGRRENPNLLVKLFRQNPAGAISG 852


>ref|XP_004967802.1| PREDICTED: 5'-3' exoribonuclease 3-like isoform X3 [Setaria italica]
          Length = 866

 Score =  486 bits (1252), Expect = e-134
 Identities = 284/631 (45%), Positives = 370/631 (58%), Gaps = 31/631 (4%)
 Frame = +3

Query: 3    GLDADLIMLALATHEVHFSILREDVHAEEQRPISIQALESSLAEFNFSAKVNTII----- 167
            GLDADLIMLALATHEVHFSILRE V+   Q+       +      N   KV         
Sbjct: 23   GLDADLIMLALATHEVHFSILREVVYTPGQQDKCFLCGQVGHLAANCEGKVKRKAGEFDE 82

Query: 168  RGQSLV-KKPYQFVNIWTLREYLELDLKIYDPPFVIDLERIVDDFILICFFTGNDFLPHM 344
            +G ++V KKPYQF+NIWTLREYLE + ++ +PPF ID ERIVDDFI +CFF GNDFLPHM
Sbjct: 83   KGDAIVPKKPYQFLNIWTLREYLEYEFRMPNPPFQIDFERIVDDFIFMCFFVGNDFLPHM 142

Query: 345  PTLEIREGAIDLLMSVYRDEFKKFGGYLVDMQKAKDRKAAYVNLKRMEKFILAVGTFEDR 524
            PTLEIREGAI+LLM+VY+ EF   GGYL D        +   +L R+E FI AVG++ED+
Sbjct: 143  PTLEIREGAINLLMAVYKKEFPSMGGYLTD--------SCTPDLNRVEHFIQAVGSYEDK 194

Query: 525  IFKKRMDLRQRMIKRLLRENAKVIDDQDFEQE------TPV--FQS---MIGYLEPKRRN 671
            IF+KR  L QR  +R+ RE A+     D +         PV  FQ      G +      
Sbjct: 195  IFQKRARLHQRQAERIKREKAQAKRGDDLDPHVRDDLIVPVQRFQGSRLASGAVPAPYEQ 254

Query: 672  WFCNPVDSTLTSKAKSGCYQTSSGIT--------SNNEDDIVRENTKELEQKLKDFIREK 827
               +  +  + ++A+     ++SG +         N+ +   REN +EL+  LKD +REK
Sbjct: 255  NGSHKDNKEMNNRARKAARVSTSGSSIAAAIVEAENDLEAQERENKEELKSMLKDALREK 314

Query: 828  SDLYKQGGLERDRVKLGMHGWKERYYEKNFSAKSPKDVEATCKEIVKKYIEGLCWVLQYY 1007
            SD++     E D+VKLG  GW+ERYYE+ F A++P+ +E   +++V KY EGLCWV+ YY
Sbjct: 315  SDIFNSENPEEDKVKLGEPGWRERYYEEKFGARTPEQIEEIRRDVVLKYTEGLCWVMHYY 374

Query: 1008 FLGVRXXXXXXXXXXXXFASDLKGLSTISISFEMGAPFKPFDQLMGVLPPRSVSALPKPY 1187
            + GV             FASDL+ L  + I+FE+G PFKPFDQLMGV P  S  ALP  Y
Sbjct: 375  YEGVCSWQWFYPYHYAPFASDLRDLGQLGITFELGTPFKPFDQLMGVFPAASAHALPLQY 434

Query: 1188 WNLMISEESNLAEFYPTDFDVDIEGKRYLWQGIVKLPFINEDLLLSETKKCENELKEDEA 1367
              LM+   S + +FYPTDF+VD+ GKRY WQGI KLPFI+E  LL+E KK E+ L  +EA
Sbjct: 435  RRLMMDPNSPIIDFYPTDFEVDMNGKRYSWQGIAKLPFIDEARLLAEIKKVEHTLTPEEA 494

Query: 1368 KRNSEAMNKLFVMRSHVLGSSISSF--YXXXXXXXXXXXXXELIDPHLSGGMNGFICPCD 1541
            +RNS   + LFV  SH L   I S                 E +DP  SGGMNG+I  C 
Sbjct: 495  RRNSVMFDMLFVNGSHPLSPYIYSLNSKFGHLPDKERNEIKEKLDPSASGGMNGYITLCS 554

Query: 1542 DDLG---LANSVFGLKGREEDVVKDDVICVRYECPDNHPHIPRPPMEVTFPEKTITEADI 1712
             D       + V GL    ED++ + VIC  Y+ PD+H HI RPP  V  P+KT+   D+
Sbjct: 555  GDPCPPIFRSPVDGL----EDIMDNQVICSIYKLPDHHKHIARPPAGVIIPKKTVEAGDL 610

Query: 1713 EKQP-LWHEYEGHKPPNRLQIQHNCRTAING 1802
            +  P LWHE  G +P +    +HN   AI+G
Sbjct: 611  KPPPVLWHEDSGRRPHDNSN-RHNPPGAISG 640


>ref|XP_004967801.1| PREDICTED: 5'-3' exoribonuclease 3-like isoform X2 [Setaria italica]
          Length = 994

 Score =  486 bits (1252), Expect = e-134
 Identities = 284/631 (45%), Positives = 370/631 (58%), Gaps = 31/631 (4%)
 Frame = +3

Query: 3    GLDADLIMLALATHEVHFSILREDVHAEEQRPISIQALESSLAEFNFSAKVNTII----- 167
            GLDADLIMLALATHEVHFSILRE V+   Q+       +      N   KV         
Sbjct: 151  GLDADLIMLALATHEVHFSILREVVYTPGQQDKCFLCGQVGHLAANCEGKVKRKAGEFDE 210

Query: 168  RGQSLV-KKPYQFVNIWTLREYLELDLKIYDPPFVIDLERIVDDFILICFFTGNDFLPHM 344
            +G ++V KKPYQF+NIWTLREYLE + ++ +PPF ID ERIVDDFI +CFF GNDFLPHM
Sbjct: 211  KGDAIVPKKPYQFLNIWTLREYLEYEFRMPNPPFQIDFERIVDDFIFMCFFVGNDFLPHM 270

Query: 345  PTLEIREGAIDLLMSVYRDEFKKFGGYLVDMQKAKDRKAAYVNLKRMEKFILAVGTFEDR 524
            PTLEIREGAI+LLM+VY+ EF   GGYL D        +   +L R+E FI AVG++ED+
Sbjct: 271  PTLEIREGAINLLMAVYKKEFPSMGGYLTD--------SCTPDLNRVEHFIQAVGSYEDK 322

Query: 525  IFKKRMDLRQRMIKRLLRENAKVIDDQDFEQE------TPV--FQS---MIGYLEPKRRN 671
            IF+KR  L QR  +R+ RE A+     D +         PV  FQ      G +      
Sbjct: 323  IFQKRARLHQRQAERIKREKAQAKRGDDLDPHVRDDLIVPVQRFQGSRLASGAVPAPYEQ 382

Query: 672  WFCNPVDSTLTSKAKSGCYQTSSGIT--------SNNEDDIVRENTKELEQKLKDFIREK 827
               +  +  + ++A+     ++SG +         N+ +   REN +EL+  LKD +REK
Sbjct: 383  NGSHKDNKEMNNRARKAARVSTSGSSIAAAIVEAENDLEAQERENKEELKSMLKDALREK 442

Query: 828  SDLYKQGGLERDRVKLGMHGWKERYYEKNFSAKSPKDVEATCKEIVKKYIEGLCWVLQYY 1007
            SD++     E D+VKLG  GW+ERYYE+ F A++P+ +E   +++V KY EGLCWV+ YY
Sbjct: 443  SDIFNSENPEEDKVKLGEPGWRERYYEEKFGARTPEQIEEIRRDVVLKYTEGLCWVMHYY 502

Query: 1008 FLGVRXXXXXXXXXXXXFASDLKGLSTISISFEMGAPFKPFDQLMGVLPPRSVSALPKPY 1187
            + GV             FASDL+ L  + I+FE+G PFKPFDQLMGV P  S  ALP  Y
Sbjct: 503  YEGVCSWQWFYPYHYAPFASDLRDLGQLGITFELGTPFKPFDQLMGVFPAASAHALPLQY 562

Query: 1188 WNLMISEESNLAEFYPTDFDVDIEGKRYLWQGIVKLPFINEDLLLSETKKCENELKEDEA 1367
              LM+   S + +FYPTDF+VD+ GKRY WQGI KLPFI+E  LL+E KK E+ L  +EA
Sbjct: 563  RRLMMDPNSPIIDFYPTDFEVDMNGKRYSWQGIAKLPFIDEARLLAEIKKVEHTLTPEEA 622

Query: 1368 KRNSEAMNKLFVMRSHVLGSSISSF--YXXXXXXXXXXXXXELIDPHLSGGMNGFICPCD 1541
            +RNS   + LFV  SH L   I S                 E +DP  SGGMNG+I  C 
Sbjct: 623  RRNSVMFDMLFVNGSHPLSPYIYSLNSKFGHLPDKERNEIKEKLDPSASGGMNGYITLCS 682

Query: 1542 DDLG---LANSVFGLKGREEDVVKDDVICVRYECPDNHPHIPRPPMEVTFPEKTITEADI 1712
             D       + V GL    ED++ + VIC  Y+ PD+H HI RPP  V  P+KT+   D+
Sbjct: 683  GDPCPPIFRSPVDGL----EDIMDNQVICSIYKLPDHHKHIARPPAGVIIPKKTVEAGDL 738

Query: 1713 EKQP-LWHEYEGHKPPNRLQIQHNCRTAING 1802
            +  P LWHE  G +P +    +HN   AI+G
Sbjct: 739  KPPPVLWHEDSGRRPHDNSN-RHNPPGAISG 768


>ref|XP_004967800.1| PREDICTED: 5'-3' exoribonuclease 3-like isoform X1 [Setaria italica]
          Length = 1074

 Score =  486 bits (1252), Expect = e-134
 Identities = 284/631 (45%), Positives = 370/631 (58%), Gaps = 31/631 (4%)
 Frame = +3

Query: 3    GLDADLIMLALATHEVHFSILREDVHAEEQRPISIQALESSLAEFNFSAKVNTII----- 167
            GLDADLIMLALATHEVHFSILRE V+   Q+       +      N   KV         
Sbjct: 231  GLDADLIMLALATHEVHFSILREVVYTPGQQDKCFLCGQVGHLAANCEGKVKRKAGEFDE 290

Query: 168  RGQSLV-KKPYQFVNIWTLREYLELDLKIYDPPFVIDLERIVDDFILICFFTGNDFLPHM 344
            +G ++V KKPYQF+NIWTLREYLE + ++ +PPF ID ERIVDDFI +CFF GNDFLPHM
Sbjct: 291  KGDAIVPKKPYQFLNIWTLREYLEYEFRMPNPPFQIDFERIVDDFIFMCFFVGNDFLPHM 350

Query: 345  PTLEIREGAIDLLMSVYRDEFKKFGGYLVDMQKAKDRKAAYVNLKRMEKFILAVGTFEDR 524
            PTLEIREGAI+LLM+VY+ EF   GGYL D        +   +L R+E FI AVG++ED+
Sbjct: 351  PTLEIREGAINLLMAVYKKEFPSMGGYLTD--------SCTPDLNRVEHFIQAVGSYEDK 402

Query: 525  IFKKRMDLRQRMIKRLLRENAKVIDDQDFEQE------TPV--FQS---MIGYLEPKRRN 671
            IF+KR  L QR  +R+ RE A+     D +         PV  FQ      G +      
Sbjct: 403  IFQKRARLHQRQAERIKREKAQAKRGDDLDPHVRDDLIVPVQRFQGSRLASGAVPAPYEQ 462

Query: 672  WFCNPVDSTLTSKAKSGCYQTSSGIT--------SNNEDDIVRENTKELEQKLKDFIREK 827
               +  +  + ++A+     ++SG +         N+ +   REN +EL+  LKD +REK
Sbjct: 463  NGSHKDNKEMNNRARKAARVSTSGSSIAAAIVEAENDLEAQERENKEELKSMLKDALREK 522

Query: 828  SDLYKQGGLERDRVKLGMHGWKERYYEKNFSAKSPKDVEATCKEIVKKYIEGLCWVLQYY 1007
            SD++     E D+VKLG  GW+ERYYE+ F A++P+ +E   +++V KY EGLCWV+ YY
Sbjct: 523  SDIFNSENPEEDKVKLGEPGWRERYYEEKFGARTPEQIEEIRRDVVLKYTEGLCWVMHYY 582

Query: 1008 FLGVRXXXXXXXXXXXXFASDLKGLSTISISFEMGAPFKPFDQLMGVLPPRSVSALPKPY 1187
            + GV             FASDL+ L  + I+FE+G PFKPFDQLMGV P  S  ALP  Y
Sbjct: 583  YEGVCSWQWFYPYHYAPFASDLRDLGQLGITFELGTPFKPFDQLMGVFPAASAHALPLQY 642

Query: 1188 WNLMISEESNLAEFYPTDFDVDIEGKRYLWQGIVKLPFINEDLLLSETKKCENELKEDEA 1367
              LM+   S + +FYPTDF+VD+ GKRY WQGI KLPFI+E  LL+E KK E+ L  +EA
Sbjct: 643  RRLMMDPNSPIIDFYPTDFEVDMNGKRYSWQGIAKLPFIDEARLLAEIKKVEHTLTPEEA 702

Query: 1368 KRNSEAMNKLFVMRSHVLGSSISSF--YXXXXXXXXXXXXXELIDPHLSGGMNGFICPCD 1541
            +RNS   + LFV  SH L   I S                 E +DP  SGGMNG+I  C 
Sbjct: 703  RRNSVMFDMLFVNGSHPLSPYIYSLNSKFGHLPDKERNEIKEKLDPSASGGMNGYITLCS 762

Query: 1542 DDLG---LANSVFGLKGREEDVVKDDVICVRYECPDNHPHIPRPPMEVTFPEKTITEADI 1712
             D       + V GL    ED++ + VIC  Y+ PD+H HI RPP  V  P+KT+   D+
Sbjct: 763  GDPCPPIFRSPVDGL----EDIMDNQVICSIYKLPDHHKHIARPPAGVIIPKKTVEAGDL 818

Query: 1713 EKQP-LWHEYEGHKPPNRLQIQHNCRTAING 1802
            +  P LWHE  G +P +    +HN   AI+G
Sbjct: 819  KPPPVLWHEDSGRRPHDNSN-RHNPPGAISG 848


>gb|AFW61091.1| hypothetical protein ZEAMMB73_651968 [Zea mays]
          Length = 1058

 Score =  485 bits (1248), Expect = e-134
 Identities = 316/804 (39%), Positives = 414/804 (51%), Gaps = 66/804 (8%)
 Frame = +3

Query: 3    GLDADLIMLALATHEVHFSILREDVHAEEQRPISIQALESSLAEFNFSAKVNTII----- 167
            GLDADLIMLALATHEVHFSILRE V    Q+       +      N   K          
Sbjct: 231  GLDADLIMLALATHEVHFSILREVVFTPGQQDKCFLCGQVGHLAANCEGKAKRKAGEYDE 290

Query: 168  RGQSLV-KKPYQFVNIWTLREYLELDLKIYDPPFVIDLERIVDDFILICFFTGNDFLPHM 344
            +G+++V KKPYQF+NIWTLREYLE + ++ +PPF ID ERIVDDFI +CFF GNDFLPHM
Sbjct: 291  KGEAIVPKKPYQFLNIWTLREYLEYEFRMPNPPFQIDFERIVDDFIFMCFFVGNDFLPHM 350

Query: 345  PTLEIREGAIDLLMSVYRDEFKKFGGYLVDMQKAKDRKAAYVNLKRMEKFILAVGTFEDR 524
            PTLEIREGAI+LLM+VY+ EF   GGYL D        +   +L R+E FI AVG++ED+
Sbjct: 351  PTLEIREGAINLLMAVYKKEFPSMGGYLTD--------SCTPDLNRVEHFIQAVGSYEDK 402

Query: 525  IFKKRMDLRQRMIKRLLRENAKVIDDQDFEQETPVFQSMIGYLEPKRRNWFCNPVDSTLT 704
            IF+KR  L QR  +R+ RE A+     D              L+P  R+    PV +   
Sbjct: 403  IFQKRARLHQRQAERIKREKAQAKRGDD--------------LDPHVRDDLIVPVSNFRG 448

Query: 705  SKAKSGCYQ----------------------TSSGIT-----SNNEDDI---VRENTKEL 794
            S+  SG                         +SSG +        E D+    REN +EL
Sbjct: 449  SRLASGAVPSPYEQNGSQRERYNQTRKAPRVSSSGSSIAAAIVEAEQDLEAQERENKEEL 508

Query: 795  EQKLKDFIREKSDLYKQGGLERDRVKLGMHGWKERYYEKNFSAKSPKDVEATCKEIVKKY 974
            +  LKD +REKSD++     E D+VKLG  GW++RYYE+ F A++P+ +E   +++  KY
Sbjct: 509  KSMLKDALREKSDVFNSENSEEDKVKLGEPGWRDRYYEEKFGARTPERMEEIRRDVALKY 568

Query: 975  IEGLCWVLQYYFLGVRXXXXXXXXXXXXFASDLKGLSTISISFEMGAPFKPFDQLMGVLP 1154
             EGLCWV+ YY+ GV             FASDL  LS ++I+FE+G+PFKPFDQLMGV P
Sbjct: 569  TEGLCWVMHYYYEGVCSWQWFYPYHYAPFASDLTSLSQLNITFELGSPFKPFDQLMGVFP 628

Query: 1155 PRSVSALPKPYWNLMISEESNLAEFYPTDFDVDIEGKRYLWQGIVKLPFINEDLLLSETK 1334
              S  ALP  Y  LM    S + +FYPTDF+VD+ GKR+ WQGI KLPFI ED LL+E K
Sbjct: 629  AASAHALPLKYRQLMTDPNSPIIDFYPTDFEVDMNGKRFSWQGIAKLPFIEEDRLLAEIK 688

Query: 1335 KCENELKEDEAKRNSEAMNKLFVMRSHVLGSSISSF--YXXXXXXXXXXXXXELIDPHLS 1508
            K E+ L  +EA+RNS   N LFV  +H L   I S                 E +DP  S
Sbjct: 689  KVEDTLTPEEARRNSTMCNMLFVNGAHSLSPYIYSLNSKFGHLPDKDRGAIKEKLDPSAS 748

Query: 1509 GGMNGFICPCDDDLG---LANSVFGLKGREEDVVKDDVICVRYECPDNHPHIPRPPMEVT 1679
            GGMNG+I  C  D       + V GL    ED++ + VIC  Y+ PD H HI RPP  V 
Sbjct: 749  GGMNGYIALCGGDPSPPVFRSPVDGL----EDIMDNQVICSIYKLPDPHKHIARPPAGVI 804

Query: 1680 FPEKTITEADIEKQP-LWHEYEGHKPPNRLQIQHNCRTAINGGKFTLPNSSSDREVWKGA 1856
             P+K++   D++  P LWHE  G +P              +      P  +S+R+   GA
Sbjct: 805  IPKKSVEAGDLKPPPVLWHEDSGRRP--------------HDNNHRRPYDNSNRQNPSGA 850

Query: 1857 SSGFSAGRGK------------GYSETSNSHLYYESYSGIRAVDNQKLISTISTSASVKW 2000
             SG   G               G    S S  Y    SG+   + +  +        ++ 
Sbjct: 851  LSGRQLGEAAHRLVVNSLNVRGGGQNNSPSMPYQTMMSGMNYPNGRHHVGNHGVPPRMEQ 910

Query: 2001 VSGRGKGYTESSSYTNQNFARGGQGWSRGGPNQGNWSGNG----------THGDLNSGRA 2150
             +GR   +    + TN   A G     R GP++     +G           H D +SGR 
Sbjct: 911  PAGRSGWHVSDDNMTNGQAAYGQYQPERLGPSRHERGNHGRQQYNPYARDNHHD-SSGRV 969

Query: 2151 S--GYARGTRAVNGGKADSISPSS 2216
               GY +     N G   S +PS+
Sbjct: 970  QPPGYHQ-----NRGNPQSAAPSA 988


>ref|XP_002306919.2| EXORIBONUCLEASE 2 family protein [Populus trichocarpa]
            gi|550339757|gb|EEE93915.2| EXORIBONUCLEASE 2 family
            protein [Populus trichocarpa]
          Length = 1052

 Score =  484 bits (1247), Expect = e-134
 Identities = 287/624 (45%), Positives = 367/624 (58%), Gaps = 40/624 (6%)
 Frame = +3

Query: 3    GLDADLIMLALATHEVHFSILREDVHAEEQRP---ISIQALESSLA--------EFNFSA 149
            GLDADLIMLALATHEVHFSILRE V    Q+    I  QA   + A           F  
Sbjct: 231  GLDADLIMLALATHEVHFSILREIVFTPGQQDKCFICGQAGHLAAACEGKAKRKAGEFDE 290

Query: 150  KVNTIIRGQSLVKKPYQFVNIWTLREYLELDLKIYDPPFVIDLERIVDDFILICFFTGND 329
            K N +    ++ KKPYQF+NIWTLREYLE + +I +PPF IDLER VDDFI ICFF GND
Sbjct: 291  KGNDV----AVPKKPYQFLNIWTLREYLEYEFRIPNPPFEIDLERTVDDFIFICFFVGND 346

Query: 330  FLPHMPTLEIREGAIDLLMSVYRDEFKKFGGYLVDMQKAKDRKAAYVNLKRMEKFILAVG 509
            FLPHMPTLEIREGAI+LLM+VY+ EF+  GGYL D  K         NL R+E FI AVG
Sbjct: 347  FLPHMPTLEIREGAINLLMAVYKKEFRVLGGYLTDGSKP--------NLSRVEHFIQAVG 398

Query: 510  TFEDRIFKKRMDLRQRMIKRLLRENAKVIDDQDFE-QETPVFQSMIGYLEPKRRNWFCNP 686
             +ED+IF+KR  L QR  +R+ RE  +     D + Q  P  +S++   + +       P
Sbjct: 399  AYEDKIFQKRARLHQRQAERIKREKTQARRGDDVQPQHQP--ESLVAVTQFRGSRLASAP 456

Query: 687  VDS--------TLTSKAKSGCYQTSS----GITSNNEDDIVR----------ENTKELEQ 800
              S        + TS  K    Q+        T+N    IV           EN +EL+ 
Sbjct: 457  TPSPYQDDGTHSQTSDGKGSSVQSRKVARLSSTANIGAAIVEAENCLEIEAHENKEELKT 516

Query: 801  KLKDFIREKSDLYKQGGLERDRVKLGMHGWKERYYEKNFSAKSPKDVEATCKEIVKKYIE 980
            KLK+ +REKSD++     E D+VKLG  GWKERYYE+ FSAKS  ++EA  +++V +Y E
Sbjct: 517  KLKESLREKSDVFNSKNHEEDKVKLGEPGWKERYYEEKFSAKSLDEMEAVRRDVVLRYTE 576

Query: 981  GLCWVLQYYFLGVRXXXXXXXXXXXXFASDLKGLSTISISFEMGAPFKPFDQLMGVLPPR 1160
            GLCWV+ YY+ GV             FASDL  L  ++ISFE+G+PFKPF+QL+GV P  
Sbjct: 577  GLCWVMHYYYEGVCSWQWFYPYHYAPFASDLTDLGQLNISFELGSPFKPFNQLLGVFPAA 636

Query: 1161 SVSALPKPYWNLMISEESNLAEFYPTDFDVDIEGKRYLWQGIVKLPFINEDLLLSETKKC 1340
            S  ALP  Y  LM    S + +FYPTDF+VD+ GKR+ WQGI KLPFI+E  LL+E +K 
Sbjct: 637  SSHALPVHYRKLMTDPNSPIFDFYPTDFEVDMNGKRFAWQGIAKLPFIDEARLLAEVQKI 696

Query: 1341 ENELKEDEAKRNSEAMNKLFVMRSHVLGSSISSF--YXXXXXXXXXXXXXELIDPHLSGG 1514
            E+ L E+EA+RNS   + LFV  SH L  SI     +             E I+P LS G
Sbjct: 697  EHTLTEEEARRNSMMFDMLFVSSSHPLSESIYLLDNHCKQLTDKERVEVKERINPELSDG 756

Query: 1515 MNGFICPCDDDLG---LANSVFGLKGREEDVVKDDVICVRYECPDNHPHIPRPPMEVTFP 1685
            MNG++ PC  D       + V G+    ED++ ++VICV Y  PD H HI  PP+ V FP
Sbjct: 757  MNGYLSPCAGDTHPPIFRSPVVGM----EDILANEVICVIYRLPDPHKHITYPPVGVIFP 812

Query: 1686 EKTITEADIEKQP-LWHEYEGHKP 1754
            +K + + D++  P LWHE  G +P
Sbjct: 813  KKIVDQGDLKPDPVLWHEESGRRP 836


>ref|XP_002457601.1| hypothetical protein SORBIDRAFT_03g010040 [Sorghum bicolor]
            gi|241929576|gb|EES02721.1| hypothetical protein
            SORBIDRAFT_03g010040 [Sorghum bicolor]
          Length = 1066

 Score =  484 bits (1246), Expect = e-134
 Identities = 305/754 (40%), Positives = 403/754 (53%), Gaps = 45/754 (5%)
 Frame = +3

Query: 3    GLDADLIMLALATHEVHFSILREDVHAEEQRPISIQALESSLAEFNFSAKVNTII----- 167
            GLDADLIMLALATHEVHFSILRE V+   Q+       +      N   K          
Sbjct: 231  GLDADLIMLALATHEVHFSILREVVYTPGQQDKCFLCGQVGHLAANCEGKAKRKAGEFDE 290

Query: 168  RGQSLV-KKPYQFVNIWTLREYLELDLKIYDPPFVIDLERIVDDFILICFFTGNDFLPHM 344
            +G ++V KKPYQF+NIWTLREYLE + ++ +PPF ID ERIVDDFI +CFF GNDFLPHM
Sbjct: 291  KGDAIVPKKPYQFLNIWTLREYLEYEFRMPNPPFKIDFERIVDDFIFMCFFVGNDFLPHM 350

Query: 345  PTLEIREGAIDLLMSVYRDEFKKFGGYLVDMQKAKDRKAAYVNLKRMEKFILAVGTFEDR 524
            PTLEIREGAI+LLM+VY+ EF   GGYL D        +   +L R+E FI AVG++ED+
Sbjct: 351  PTLEIREGAINLLMAVYKKEFPSMGGYLTD--------SCTPDLSRVEHFIQAVGSYEDK 402

Query: 525  IFKKRMDLRQRMIKRLLRENAKVIDDQDFEQE------TPV----------------FQS 638
            IF+KR  L QR  +R+ R+ A+     D +         PV                +Q 
Sbjct: 403  IFQKRARLHQRQAERIKRDKAQAKRGDDLDPHVRDDLIVPVQRFQGSRLASGAVPVPYQQ 462

Query: 639  MIGYLEPKRRNWFCNPVDSTLTSKAKSGCYQTSSGITSNNEDDIVRENTKELEQKLKDFI 818
               +   K RN     V    TS +        +    N+ +   REN +EL+  LKD +
Sbjct: 463  NGSHRNNKERNSRAPKVARVSTSGSSISAAIVEA---ENDLEAQERENKEELKSMLKDAL 519

Query: 819  REKSDLYKQGGLERDRVKLGMHGWKERYYEKNFSAKSPKDVEATCKEIVKKYIEGLCWVL 998
            REKSD++     + D+VKLG  GW+ERYYE+ F A++P+ +E   +++V KY EGLCWV+
Sbjct: 520  REKSDIFNSDNPDEDKVKLGEPGWRERYYEEKFGARTPEQIEEIRRDVVLKYTEGLCWVM 579

Query: 999  QYYFLGVRXXXXXXXXXXXXFASDLKGLSTISISFEMGAPFKPFDQLMGVLPPRSVSALP 1178
             YY+ GV             FASDL GL  ++I FE+G PFKPFDQLMGV P  S  ALP
Sbjct: 580  HYYYEGVCSWQWFYPYHYAPFASDLSGLGQLNIKFELGTPFKPFDQLMGVFPAASAHALP 639

Query: 1179 KPYWNLMISEESNLAEFYPTDFDVDIEGKRYLWQGIVKLPFINEDLLLSETKKCENELKE 1358
              Y  LM    S + +FYP DF+VD+ GKRY WQGI KLPFI+E  LL+E KK E+ L  
Sbjct: 640  LQYRQLMTDPHSPIIDFYPIDFEVDMNGKRYSWQGIAKLPFIDEARLLAEIKKVEHTLTP 699

Query: 1359 DEAKRNSEAMNKLFVMRSHVLGSSISSF--YXXXXXXXXXXXXXELIDPHLSGGMNGFIC 1532
            +EA+RNS   + LFV  SH L   I S                 E +DP  SGGMNG+I 
Sbjct: 700  EEARRNSIMFDMLFVNGSHPLSPYIYSLNSKFGHLPDKKRNEIKEKLDPSASGGMNGYIT 759

Query: 1533 PCDDDLG---LANSVFGLKGREEDVVKDDVICVRYECPDNHPHIPRPPMEVTFPEKTITE 1703
             C  D       + V GL    ED++ + VIC  Y+ PD+H HI RPP+ V  P+KT+  
Sbjct: 760  LCSGDPCPPIFRSPVDGL----EDIMDNQVICSIYKLPDHHKHIARPPVGVIIPKKTVEA 815

Query: 1704 ADIEKQP-LWHEYEGHKPPNRLQIQHNCRTAINGGKFTLPNSSSDREVWKGA-----SSG 1865
             D++  P LWHE  G +P +            N  +   P + S R++ + A     +S 
Sbjct: 816  GDLKPPPVLWHEDSGRRPHD------------NSNRQNPPGAISGRQLGEAAHRLVINSL 863

Query: 1866 FSAGRGKGYSETSNSHLYYESYSGIRAVDNQKLISTISTSASVKWVSGRGKGYTESSSYT 2045
             + GRG+       S  Y    +G+  ++    +S+      V   +G    Y    S +
Sbjct: 864  NAQGRGQ---HGGTSMPYQTIMNGLHHLNVMPPVSSQGMPPRVGQSAGPPGWYVPRGSVS 920

Query: 2046 NQN---FARGGQG---WSRGGPNQGNWSGNGTHG 2129
            N     +A  G G   + R GP+Q      G HG
Sbjct: 921  NGQPPAYASSGSGHYQYERSGPSQYE---QGNHG 951


>tpg|DAA54014.1| TPA: hypothetical protein ZEAMMB73_402768 [Zea mays]
          Length = 1066

 Score =  483 bits (1243), Expect = e-133
 Identities = 313/759 (41%), Positives = 409/759 (53%), Gaps = 38/759 (5%)
 Frame = +3

Query: 3    GLDADLIMLALATHEVHFSILREDVHAEEQRPISIQALESSLAEFNFSAKVNTII----- 167
            GLDADLIMLALATHEVHFSILRE V+   Q+       +      N   KV         
Sbjct: 231  GLDADLIMLALATHEVHFSILREVVYTPGQQDKCFLCGQVGHLAANCEGKVKRKAGEFDE 290

Query: 168  RGQSLV-KKPYQFVNIWTLREYLELDLKIYDPPFVIDLERIVDDFILICFFTGNDFLPHM 344
            +G ++V KKPYQF+NIWTLREYLE + ++ +PPF ID ERIVDDFI +CFF GNDFLPHM
Sbjct: 291  KGGAIVPKKPYQFLNIWTLREYLEYEFRMPNPPFKIDFERIVDDFIFMCFFVGNDFLPHM 350

Query: 345  PTLEIREGAIDLLMSVYRDEFKKFGGYLVDMQKAKDRKAAYVNLKRMEKFILAVGTFEDR 524
            PTLEIREGAI+LLM+VY+ EF   GGYL D        +   +L R+E FI AVG++ED+
Sbjct: 351  PTLEIREGAINLLMAVYKKEFPSMGGYLTD--------SCTPDLSRVEHFIQAVGSYEDK 402

Query: 525  IFKKRMDLRQRMIKRLLRENAKVIDDQDFEQE---------------------TPV-FQS 638
            IF+KR  L QR  +R+ RE A+     D +                        PV ++ 
Sbjct: 403  IFQKRARLHQRQAERIKREKAQAKRGDDLDPHVRDDLIVPIQRFQGSRLASGAVPVPYEQ 462

Query: 639  MIGYLEPKRRNWFCNPVDSTLTSKAKSGCYQTSSGITSNNEDDIVR-ENTKELEQKLKDF 815
               + + K RN          T    SG    S+ + + N+ +    EN +EL+  LKD 
Sbjct: 463  NGSHKDNKERNSRARKAARVST----SGSSIASALVEAENDLEAQECENKEELKSMLKDA 518

Query: 816  IREKSDLYKQGGLERDRVKLGMHGWKERYYEKNFSAKSPKDVEATCKEIVKKYIEGLCWV 995
            +REKSD++     E D+VKLG  GW+ERYYE+ F A++P+ +E   +++V KY EGLCWV
Sbjct: 519  LREKSDIFNSDNPEEDKVKLGEPGWRERYYEEKFGARTPEQIEEIRRDVVLKYTEGLCWV 578

Query: 996  LQYYFLGVRXXXXXXXXXXXXFASDLKGLSTISISFEMGAPFKPFDQLMGVLPPRSVSAL 1175
            + YY+ GV             FASDL GL  ++I FE+G PFKPFDQLMGV P  S  AL
Sbjct: 579  MHYYYEGVCSWQWFYPYHYAPFASDLSGLGQLNIKFELGTPFKPFDQLMGVFPAASAHAL 638

Query: 1176 PKPYWNLMISEESNLAEFYPTDFDVDIEGKRYLWQGIVKLPFINEDLLLSETKKCENELK 1355
            P  Y  LM    S + +FYPTDF+VD+ GKRY WQGI KLPFI+ED LL+E KK E+ L 
Sbjct: 639  PLQYRRLMTDPNSPIIDFYPTDFEVDMNGKRYSWQGIAKLPFIDEDRLLAEIKKVEHTLT 698

Query: 1356 EDEAKRNSEAMNKLFVMRSHVLGSSISSF--YXXXXXXXXXXXXXELIDPHLSGGMNGFI 1529
             +EA+RNS   + LFV  SH L   I S                 E +DP  SGGMNG+I
Sbjct: 699  PEEARRNSIMCDMLFVNGSHPLSPYIYSLNSKFGHLPDKRRNEIKEKLDPSASGGMNGYI 758

Query: 1530 CPCDDDLG---LANSVFGLKGREEDVVKDDVICVRYECPDNHPHIPRPPMEVTFPEKTIT 1700
              C  D       + V GL    ED++ + VIC  Y  PD+H HI +PP+ V  P+K + 
Sbjct: 759  TLCSGDPCPPIFRSPVDGL----EDIMDNQVICSIYNLPDHHKHIAQPPVGVIMPKKIVE 814

Query: 1701 EADIEKQP-LWHEYEGHKPPNRLQIQHNCRTAINGGKFTLPNSSSDREVWKGASSGFSAG 1877
              D++  P LWHE  G +P +    Q N   AI+G +      ++ R V    +S  + G
Sbjct: 815  AGDLKPPPVLWHEDSGRRPHDNSNRQ-NPSGAISGRQL---GEAAHRLV---INSLNAQG 867

Query: 1878 RGKGYSETSNSHLYYESYSGIRAVDNQKLISTISTSASVKWVSGRGKGYTESSSYTN-QN 2054
            RG+    +  S  Y    +G+  +D    +S       V   +G    Y    S +N Q 
Sbjct: 868  RGQ---HSGTSMPYRTIMNGLHHLDVASPVSNQGMRPQVGQSAGPPGWYVPRGSVSNGQP 924

Query: 2055 FARGGQGWSRGGPNQGNWSGNGTHGDLNSGRASG--YAR 2165
             A    G    G  Q   SG+  +   N GR     YAR
Sbjct: 925  PAYASSG---SGHYQYESSGHSQYEQGNHGRQQSHPYAR 960


>ref|XP_004972700.1| PREDICTED: 5'-3' exoribonuclease 3-like isoform X1 [Setaria italica]
          Length = 1064

 Score =  483 bits (1242), Expect = e-133
 Identities = 302/747 (40%), Positives = 402/747 (53%), Gaps = 41/747 (5%)
 Frame = +3

Query: 3    GLDADLIMLALATHEVHFSILREDVHAEEQRPISIQALESSLAEFNFSAKVNTII----- 167
            GLDADLIMLALATHEVHFSILRE V+   Q+       +      N   K          
Sbjct: 231  GLDADLIMLALATHEVHFSILREVVYTPGQQDKCFLCGQVGHLAANCEGKGKRKAGEYDE 290

Query: 168  RGQSLV-KKPYQFVNIWTLREYLELDLKIYDPPFVIDLERIVDDFILICFFTGNDFLPHM 344
            +G  +V KKPYQF+NIWTLREYLE + ++ +PPF ID ERIVDDFI +CFF GNDFLPHM
Sbjct: 291  KGDPIVPKKPYQFLNIWTLREYLEYEFRMPNPPFQIDFERIVDDFIFMCFFVGNDFLPHM 350

Query: 345  PTLEIREGAIDLLMSVYRDEFKKFGGYLVDMQKAKDRKAAYVNLKRMEKFILAVGTFEDR 524
            PTLEIREGAI+LLM+VY+ EF   GGYL D        +   +L R+E FI AVG++ED+
Sbjct: 351  PTLEIREGAINLLMAVYKKEFPSMGGYLTD--------SCTPDLDRVEHFIQAVGSYEDK 402

Query: 525  IFKKRMDLRQRMIKRLLRENAKVIDDQDFEQETPVFQSMIGYLEPKRRNWFCNPV----- 689
            IF+KR  L QR  +R+ RE A+     D +    V + +I  +   R +   +       
Sbjct: 403  IFQKRARLHQRQAERIKREKAQAKRGDDLDPH--VREDLIVPVANFRGSRLASGAVPSPY 460

Query: 690  -DSTLTSKAKSGCYQTSSGIT--------SNNEDDIVRENTKELEQKLKDFIREKSDLYK 842
              +   S+A+     +S G +         N+     REN ++L+ +LKD +REKSD++ 
Sbjct: 461  EQNGAHSQARKAARVSSPGSSIAAAIVEAENDLGSQERENKEDLKSRLKDALREKSDVFN 520

Query: 843  QGGLERDRVKLGMHGWKERYYEKNFSAKSPKDVEATCKEIVKKYIEGLCWVLQYYFLGVR 1022
                E D+VKLG  GW++RYYE+ F A++   +E   +++  KY EGLCWV+ YY+ GV 
Sbjct: 521  SENPEEDKVKLGEPGWRDRYYEEKFGARTSDQMEEIRRDVALKYAEGLCWVMHYYYEGVC 580

Query: 1023 XXXXXXXXXXXXFASDLKGLSTISISFEMGAPFKPFDQLMGVLPPRSVSALPKPYWNLMI 1202
                        FASDLK LS ++I+FE+G+PFKPFDQLMGV P  S  ALP  Y  LM 
Sbjct: 581  SWQWFYPYHYAPFASDLKSLSQLNITFELGSPFKPFDQLMGVFPAASAHALPLQYRQLMT 640

Query: 1203 SEESNLAEFYPTDFDVDIEGKRYLWQGIVKLPFINEDLLLSETKKCENELKEDEAKRNSE 1382
               S + +FYPTDF+VD+ GKR+ WQGI KLPFI+ED LL+E KK E+ L  +EA RNS 
Sbjct: 641  DPSSPIIDFYPTDFEVDMNGKRFSWQGIAKLPFIDEDRLLAEIKKVEHTLTPEEAMRNST 700

Query: 1383 AMNKLFVMRSHVLGSSISSF--YXXXXXXXXXXXXXELIDPHLSGGMNGFICPCDDDLG- 1553
              N LFV  SH L   I S                 E +DP  SGGMNG+I  C  D   
Sbjct: 701  MCNMLFVNGSHPLSPYIYSLNSKFGNLPDKDRNEIKEKLDPSHSGGMNGYIALCSGDPSP 760

Query: 1554 --LANSVFGLKGREEDVVKDDVICVRYECPDNHPHIPRPPMEVTFPEKTITEADIEKQP- 1724
                + V GL    ED++ + VIC  Y+ PD H HI RPP  V  P+K++   D++  P 
Sbjct: 761  PVFRSPVDGL----EDIMDNQVICSIYKLPDPHKHIARPPAGVIIPKKSVEAGDLKPPPV 816

Query: 1725 LWHEYEGHKP---PNRLQIQHNCRTAINGGKFTLPNSSSDREVWKGASSGFSAGRGK--- 1886
            LWHE  G +P    NR    +N R   +      P+ +S R+   GA SG   G      
Sbjct: 817  LWHEDSGRRPHDNNNRRPYDNNNRRPYDNNN-RRPSDNSSRQNPAGALSGHQLGEAAHRL 875

Query: 1887 ---------GYSETSNSHLYYESYSGIRAVDNQKLISTISTSASVKWVSGRGKGYTESSS 2039
                     G    + S  Y    +G    + +  +        ++  +G+G  Y    +
Sbjct: 876  VVNSLNVRGGGQHNAPSMPYQTIMNGTNYPNGRHHMGNQGVPPRMEQPAGQG-WYVPGDN 934

Query: 2040 YTNQNFARGGQGWSRGGPNQGNWSGNG 2120
             TN   A G     R GP++     +G
Sbjct: 935  LTNGQAAYGHYQHERPGPSRYERDNHG 961


>ref|XP_002523870.1| 5'->3' exoribonuclease, putative [Ricinus communis]
            gi|223536958|gb|EEF38596.1| 5'->3' exoribonuclease,
            putative [Ricinus communis]
          Length = 993

 Score =  482 bits (1241), Expect = e-133
 Identities = 290/711 (40%), Positives = 404/711 (56%), Gaps = 38/711 (5%)
 Frame = +3

Query: 3    GLDADLIMLALATHEVHFSILREDVHAEEQRPISIQALES-----SLAEFN--------- 140
            GLDADLIMLALA+HEVHFSILRE V  ++ + I + A  S        EF          
Sbjct: 212  GLDADLIMLALASHEVHFSILREVVLLQQPQSICLSAHTSLQGRIEFGEFGSSENKTKRR 271

Query: 141  FSAKVNTIIRGQSLVKKPYQFVNIWTLREYLELDLKIYDPP--FVIDLERIVDDFILICF 314
            FS   NT+ +  S ++KPYQF+++W LR+YL+L++ IYDPP  F  D ERI+DDF+ +CF
Sbjct: 272  FSNDDNTLAKDVSFIEKPYQFLHVWILRDYLKLEMDIYDPPENFTFDSERIIDDFVFMCF 331

Query: 315  FTGNDFLPHMPTLEIREGAIDLLMSVYRDEFKKFGGYLVDMQKAKDRKAAYVNLKRMEKF 494
            F GNDF+P++PTL+I E A+DLLM+VY+  FKK GGYLVD+ +    K  Y++LKR+EKF
Sbjct: 332  FAGNDFIPNLPTLQIHERAVDLLMTVYKKNFKKLGGYLVDVHQVNSLKNDYLDLKRVEKF 391

Query: 495  ILAVGTFEDRIFKKRMDLRQRMIKRLLRE----NAKVIDDQDFEQETPVFQSMIGYLEPK 662
            IL +G +E+ IFKKR +LR+RM+++L +     NAK +D         V Q M+      
Sbjct: 392  ILLIGAYEEMIFKKRSELRERMLRKLCQHSDAANAKELDGN-------VEQDMLKISF-- 442

Query: 663  RRNWFCNPVDSTLTSKAKSGCYQTSSGITSNNEDDIVRENTKELEQKLKDFIREKSDLYK 842
                      S+L +KA+      S    S +    V +NTK  +++LK  +R+KSDL++
Sbjct: 443  ----------SSLDAKAQISEDLVSVSAVSISLWFSVLQNTKRFKEELKARLRQKSDLFQ 492

Query: 843  QGGLERDRVKLGMHGWKERYYEKNFSAKSPKDVEATCKEIVKKYIEGLCWVLQYYFLGVR 1022
             GG   D VKLG  GWK+RYYE+ FSA++P D+E   KE+V+KY EGL WVL YYF  V 
Sbjct: 493  NGGFRADTVKLGTTGWKKRYYEQKFSAENPSDIELIRKEMVQKYTEGLLWVLGYYFSAVP 552

Query: 1023 XXXXXXXXXXXXFASDLKGLSTISISFEMGAPFKPFDQLMGVLPPRSVSALPKPYWNLMI 1202
                        FASD+KG++ +   F  G+PFKPFDQLMGVLPPRS  ALPK Y  LMI
Sbjct: 553  SWTWFYPYHHAPFASDMKGMAQVKFKFPKGSPFKPFDQLMGVLPPRSAHALPKSYRQLMI 612

Query: 1203 SEESNLAEFYPTDFDVDIEGKRYLWQGIVKLPFINEDLLLSETKKCENELKEDEAKRNSE 1382
             E S++ +FYP +F +DI+GKR++WQGI KLPFI+E+ LL+ETKK E EL   EA +N E
Sbjct: 613  DERSSIIDFYPAEFQIDIDGKRFMWQGICKLPFIDEERLLAETKKMEKELTRKEADKNVE 672

Query: 1383 AMNKLFVMRSHVLGSSISSFYXXXXXXXXXXXXXELIDPHLSGGMNGFICPCDDDLGLAN 1562
             ++KLFV R +   S +                 +L+    +                  
Sbjct: 673  NVDKLFVRRENFSESQL----------------LQLVSEFAA------------------ 698

Query: 1563 SVFGLKGREEDVV--KDDVICVRYECPDNHPHIPRPPMEVTFPEKTITEADIEKQPLWHE 1736
                  GR +D+V  K+ + C+ +E P     IPRP   V +PE+ I + DI +  LWHE
Sbjct: 699  ------GRPKDMVEIKNSLRCLLFELPKGSQFIPRPLEGVKYPEQIIGDDDIMETQLWHE 752

Query: 1737 YEGHKPPNRLQIQHNCRTAINGGKFTLPNSSSDREVWKGASSGFSA-------------G 1877
              G + P RL++Q +   + +   F  P+ S++R    G  SG SA             G
Sbjct: 753  CPGSRCPTRLRVQESHIKSYHRRDFA-PSFSAERN--NGNYSGESASNWYFEPTHKGGRG 809

Query: 1878 RGKGYSETSNSHLYYESYSGIRAVD---NQKLISTISTSASVKWVSGRGKG 2021
            RG+G      S  YY+  +  R  +   + + I   +  A+  W + RG+G
Sbjct: 810  RGRGRERGVGSLNYYQLSNYCRKSELSSSSEQIHKGAGPANTGWGACRGRG 860


>ref|XP_002280236.2| PREDICTED: 5'-3' exoribonuclease 3-like [Vitis vinifera]
          Length = 1065

 Score =  481 bits (1238), Expect = e-133
 Identities = 285/649 (43%), Positives = 372/649 (57%), Gaps = 31/649 (4%)
 Frame = +3

Query: 3    GLDADLIMLALATHEVHFSILREDVHAEEQRPISIQALESSLAEFNFSAKVNTII----- 167
            GLDADLIMLALATHEVHFSILRE V    Q+       +      +   K          
Sbjct: 231  GLDADLIMLALATHEVHFSILREIVFTPGQQDKCFMCGQMGHLAADCEGKAKRKAGEFDE 290

Query: 168  RGQS--LVKKPYQFVNIWTLREYLELDLKIYDPPFVIDLERIVDDFILICFFTGNDFLPH 341
            +GQS  +VKKPYQF+NIWTLREYLE +++I + PF ID E IVDDFI +CFF GNDFLPH
Sbjct: 291  KGQSASVVKKPYQFLNIWTLREYLEYEMRIPNLPFEIDFEHIVDDFIFMCFFVGNDFLPH 350

Query: 342  MPTLEIREGAIDLLMSVYRDEFKKFGGYLVDMQKAKDRKAAYVNLKRMEKFILAVGTFED 521
            MPTLEIREGAI+LLM+VY+ E +  GGYL D  K         NL  +E FI AVG++ED
Sbjct: 351  MPTLEIREGAINLLMAVYKKELRAMGGYLTDSSKP--------NLSNVEHFIQAVGSYED 402

Query: 522  RIFKKRMDLRQRMIKRLLRENAKVIDDQDFE-QETPVFQSMIGYLE-----------PKR 665
            +IF+KR  L QR  +R+ RE A+     D + Q  P F   +               P +
Sbjct: 403  KIFQKRARLHQRQAERIKREKAQARRGDDADPQVKPEFLVPVSRYHGSRLASAPTPSPYQ 462

Query: 666  RNWFCNPVDSTLTSKAKSGCYQTSSGIT--------SNNEDDIVRENTKELEQKLKDFIR 821
            ++   +    T  S+ +    + SSG T         N+ +  + +N  EL+ KLK+ +R
Sbjct: 463  QHEIKSKQSGTSGSQGRKVA-RFSSGATVGAAIVEAENDLETELHDNKDELKAKLKELLR 521

Query: 822  EKSDLYKQGGLERDRVKLGMHGWKERYYEKNFSAKSPKDVEATCKEIVKKYIEGLCWVLQ 1001
            EKSDL+     E D+VKLG  GWKERYYE+ FS K+P++ EA   ++V KY EGLCWV+ 
Sbjct: 522  EKSDLFNSKNPEEDKVKLGEAGWKERYYEEKFSTKTPEEQEAMRNDVVLKYTEGLCWVMH 581

Query: 1002 YYFLGVRXXXXXXXXXXXXFASDLKGLSTISISFEMGAPFKPFDQLMGVLPPRSVSALPK 1181
            YY+ GV             FASDLK L  ++ISFE+G+PFKPF+QL+GV P  S  ALP+
Sbjct: 582  YYYEGVCSWQWFYPYHYAPFASDLKDLGQLNISFELGSPFKPFNQLLGVFPAASSHALPE 641

Query: 1182 PYWNLMISEESNLAEFYPTDFDVDIEGKRYLWQGIVKLPFINEDLLLSETKKCENELKED 1361
             Y  LM    S + +FYPTDF+VD+ GKR+ WQGI KLPFI+E  LL+E +K E+ L E+
Sbjct: 642  EYRKLMTDPNSPIIDFYPTDFEVDMNGKRFAWQGIAKLPFIDEARLLAEVQKIEHTLTEE 701

Query: 1362 EAKRNSEAMNKLFVMRSHVLGSSISSF--YXXXXXXXXXXXXXELIDPHLSGGMNGFICP 1535
            E +RNS   + LFV  SH L   I S                 E +DP  SGGMNG+I  
Sbjct: 702  EFRRNSVMFDMLFVALSHPLSPYIFSLDDRCKKLTDNERTEVKEQLDPRASGGMNGYISL 761

Query: 1536 CDDDLGLANSVFGLK-GREEDVVKDDVICVRYECPDNHPHIPRPPMEVTFPEKTITEADI 1712
            C  D      +F       ED++ + VIC  Y  PD H HI RPP+ VTFP+K ++  D+
Sbjct: 762  CGGD--PCPPIFRSPIASLEDIMDNQVICAIYRLPDAHKHITRPPVGVTFPKKIVSVGDL 819

Query: 1713 EKQP-LWHEYEGHKPPNRLQIQHNCRTAINGGKFTLPNSSSDREVWKGA 1856
            + +P LWHE  G +P                G+  LP + S R++ + A
Sbjct: 820  KPEPVLWHEDNGRRP-------------WENGRQNLPGTISGRQLGEAA 855


>emb|CBI19841.3| unnamed protein product [Vitis vinifera]
          Length = 870

 Score =  481 bits (1238), Expect = e-133
 Identities = 285/649 (43%), Positives = 372/649 (57%), Gaps = 31/649 (4%)
 Frame = +3

Query: 3    GLDADLIMLALATHEVHFSILREDVHAEEQRPISIQALESSLAEFNFSAKVNTII----- 167
            GLDADLIMLALATHEVHFSILRE V    Q+       +      +   K          
Sbjct: 231  GLDADLIMLALATHEVHFSILREIVFTPGQQDKCFMCGQMGHLAADCEGKAKRKAGEFDE 290

Query: 168  RGQS--LVKKPYQFVNIWTLREYLELDLKIYDPPFVIDLERIVDDFILICFFTGNDFLPH 341
            +GQS  +VKKPYQF+NIWTLREYLE +++I + PF ID E IVDDFI +CFF GNDFLPH
Sbjct: 291  KGQSASVVKKPYQFLNIWTLREYLEYEMRIPNLPFEIDFEHIVDDFIFMCFFVGNDFLPH 350

Query: 342  MPTLEIREGAIDLLMSVYRDEFKKFGGYLVDMQKAKDRKAAYVNLKRMEKFILAVGTFED 521
            MPTLEIREGAI+LLM+VY+ E +  GGYL D  K         NL  +E FI AVG++ED
Sbjct: 351  MPTLEIREGAINLLMAVYKKELRAMGGYLTDSSKP--------NLSNVEHFIQAVGSYED 402

Query: 522  RIFKKRMDLRQRMIKRLLRENAKVIDDQDFE-QETPVFQSMIGYLE-----------PKR 665
            +IF+KR  L QR  +R+ RE A+     D + Q  P F   +               P +
Sbjct: 403  KIFQKRARLHQRQAERIKREKAQARRGDDADPQVKPEFLVPVSRYHGSRLASAPTPSPYQ 462

Query: 666  RNWFCNPVDSTLTSKAKSGCYQTSSGIT--------SNNEDDIVRENTKELEQKLKDFIR 821
            ++   +    T  S+ +    + SSG T         N+ +  + +N  EL+ KLK+ +R
Sbjct: 463  QHEIKSKQSGTSGSQGRKVA-RFSSGATVGAAIVEAENDLETELHDNKDELKAKLKELLR 521

Query: 822  EKSDLYKQGGLERDRVKLGMHGWKERYYEKNFSAKSPKDVEATCKEIVKKYIEGLCWVLQ 1001
            EKSDL+     E D+VKLG  GWKERYYE+ FS K+P++ EA   ++V KY EGLCWV+ 
Sbjct: 522  EKSDLFNSKNPEEDKVKLGEAGWKERYYEEKFSTKTPEEQEAMRNDVVLKYTEGLCWVMH 581

Query: 1002 YYFLGVRXXXXXXXXXXXXFASDLKGLSTISISFEMGAPFKPFDQLMGVLPPRSVSALPK 1181
            YY+ GV             FASDLK L  ++ISFE+G+PFKPF+QL+GV P  S  ALP+
Sbjct: 582  YYYEGVCSWQWFYPYHYAPFASDLKDLGQLNISFELGSPFKPFNQLLGVFPAASSHALPE 641

Query: 1182 PYWNLMISEESNLAEFYPTDFDVDIEGKRYLWQGIVKLPFINEDLLLSETKKCENELKED 1361
             Y  LM    S + +FYPTDF+VD+ GKR+ WQGI KLPFI+E  LL+E +K E+ L E+
Sbjct: 642  EYRKLMTDPNSPIIDFYPTDFEVDMNGKRFAWQGIAKLPFIDEARLLAEVQKIEHTLTEE 701

Query: 1362 EAKRNSEAMNKLFVMRSHVLGSSISSF--YXXXXXXXXXXXXXELIDPHLSGGMNGFICP 1535
            E +RNS   + LFV  SH L   I S                 E +DP  SGGMNG+I  
Sbjct: 702  EFRRNSVMFDMLFVALSHPLSPYIFSLDDRCKKLTDNERTEVKEQLDPRASGGMNGYISL 761

Query: 1536 CDDDLGLANSVFGLK-GREEDVVKDDVICVRYECPDNHPHIPRPPMEVTFPEKTITEADI 1712
            C  D      +F       ED++ + VIC  Y  PD H HI RPP+ VTFP+K ++  D+
Sbjct: 762  CGGD--PCPPIFRSPIASLEDIMDNQVICAIYRLPDAHKHITRPPVGVTFPKKIVSVGDL 819

Query: 1713 EKQP-LWHEYEGHKPPNRLQIQHNCRTAINGGKFTLPNSSSDREVWKGA 1856
            + +P LWHE  G +P                G+  LP + S R++ + A
Sbjct: 820  KPEPVLWHEDNGRRP-------------WENGRQNLPGTISGRQLGEAA 855


>ref|XP_007017771.1| 5'-3' exoribonuclease 3 isoform 1 [Theobroma cacao]
            gi|508723099|gb|EOY14996.1| 5'-3' exoribonuclease 3
            isoform 1 [Theobroma cacao]
          Length = 1106

 Score =  481 bits (1237), Expect = e-133
 Identities = 292/663 (44%), Positives = 377/663 (56%), Gaps = 40/663 (6%)
 Frame = +3

Query: 3    GLDADLIMLALATHEVHFSILREDVHAEEQRPISIQALESSLA---EFNFSAKVNTIIR- 170
            GLDADLIMLALATHEVHFSILRE V    Q    +      +A   E     K       
Sbjct: 231  GLDADLIMLALATHEVHFSILREVVFTPGQDKCFVCGQMGHVAADCEGKAKRKAGEFDEK 290

Query: 171  --GQSLVKKPYQFVNIWTLREYLELDLKIYDPPFVIDLERIVDDFILICFFTGNDFLPHM 344
              G+++ +KPYQF+NIWTLREYLE +++I + PF +DLER+VDDFI +CFF GNDFLPHM
Sbjct: 291  GDGKAVARKPYQFLNIWTLREYLEYEMRIPNLPFEMDLERVVDDFIFMCFFVGNDFLPHM 350

Query: 345  PTLEIREGAIDLLMSVYRDEFKKFGGYLVDMQKAKDRKAAYVNLKRMEKFILAVGTFEDR 524
            PTLEIREGAI+LLM+ Y+ E +  GGYL +  K         NL R+E FI AVG++ED+
Sbjct: 351  PTLEIREGAINLLMAAYKKELRSLGGYLTNGSKP--------NLSRVEHFIQAVGSYEDK 402

Query: 525  IFKKRMDLRQRMIKRLLRENAKVIDDQDFE-QETPVFQSMIGYLEPKRRNWFCNPV--DS 695
            IF+KR  L QR  +R+ RE A+     D E Q  P     +      R     +P     
Sbjct: 403  IFQKRARLHQRQAERIKREKAQARRGDDVEPQIQPDSLVPVARFHGSRLASGPSPAPFQQ 462

Query: 696  TLTSKAKSGCYQ------TSSGIT-----SNNEDDI---VRENTKELEQKLKDFIREKSD 833
            T+ S       Q       SSG T        ED I     EN +EL+ KLK+ IR+KSD
Sbjct: 463  TMESNGNGSSGQPHKVRRLSSGATIGAAIVEAEDSIETEEHENKEELKAKLKELIRDKSD 522

Query: 834  LYKQGGLERDRVKLGMHGWKERYYEKNFSAKSPKDVEATCKEIVKKYIEGLCWVLQYYFL 1013
            ++     E D++KLG  GWKERYYE+ FSAK+P+++EA  K++V +Y EGLCWV+ YY+ 
Sbjct: 523  VFNSKNHEEDKIKLGEPGWKERYYEEKFSAKTPEEMEAIRKDVVLRYTEGLCWVMHYYYE 582

Query: 1014 GVRXXXXXXXXXXXXFASDLKGLSTISISFEMGAPFKPFDQLMGVLPPRSVSALPKPYWN 1193
            GV             FASDLK L  + I FE+G+PFKPF+QL+GV P  S  ALP+ Y  
Sbjct: 583  GVCSWRWFYPYHYAPFASDLKDLGQLDIQFELGSPFKPFNQLLGVFPAASAHALPEQYRE 642

Query: 1194 LMISEESNLAEFYPTDFDVDIEGKRYLWQGIVKLPFINEDLLLSETKKCENELKEDEAKR 1373
            LM    S + +FYPTDF++D+ GKR+ WQGI KLPFI+E+ LL+E  K E+ L E+EA+R
Sbjct: 643  LMTDPNSPIIDFYPTDFEIDMNGKRFSWQGIAKLPFIDEERLLAEVAKIEHTLTEEEARR 702

Query: 1374 NSEAMNKLFVMRSHVLGSSISSF--YXXXXXXXXXXXXXELIDPHLSGGMNGFICPCDDD 1547
            NS   + LFV  SH L   I S                 E + P LS GMNG+I PC  D
Sbjct: 703  NSIMCDMLFVAASHRLSEQIFSLDNRCRHLTEKERIEVKEEVKPDLSDGMNGYISPCAGD 762

Query: 1548 LGLANSVFGLKGREEDVVKDDVICVRYECPDNHPHIPRPPMEVTFPEKTITEADIEKQP- 1724
                     +K   ED++ ++VIC  Y  P  H HI RPP  VTFP K +  +D++ +P 
Sbjct: 763  THPPIFRSPIKDM-EDILANEVICCIYRLPKAHKHITRPPAGVTFPPKMVQFSDMKPEPV 821

Query: 1725 LWHEYEGHKP---------PNRLQIQHNCRTAINGGKFTLPNSSSDREV-----WKGASS 1862
            LWHE  G +P            L  +HN   AI+G K      +S R +      KG  +
Sbjct: 822  LWHEDSGRRPWENGRSPAQALHLMERHNPPGAISGRKL---GEASHRLIANSLQLKGDRN 878

Query: 1863 GFS 1871
            GFS
Sbjct: 879  GFS 881


>ref|XP_003564736.1| PREDICTED: 5'-3' exoribonuclease 3-like [Brachypodium distachyon]
          Length = 1061

 Score =  478 bits (1229), Expect = e-132
 Identities = 283/649 (43%), Positives = 374/649 (57%), Gaps = 31/649 (4%)
 Frame = +3

Query: 3    GLDADLIMLALATHEVHFSILREDVHAEEQRPISIQALESSLAEFNFSAKVNTII----- 167
            GLDADLIMLALATHEVHFSILRE V    Q+       +          K          
Sbjct: 231  GLDADLIMLALATHEVHFSILREVVFTPGQQEKCFLCGQVGHLAAKCEGKAKRKAGEFDE 290

Query: 168  RGQSLV-KKPYQFVNIWTLREYLELDLKIYDPPFVIDLERIVDDFILICFFTGNDFLPHM 344
            +G ++V KKPYQF+NIWTLREY+E + ++ +PPF IDLERI+DDFI +CFF GNDFLPHM
Sbjct: 291  KGDAIVPKKPYQFLNIWTLREYIEYEFRMPNPPFQIDLERIIDDFIFMCFFVGNDFLPHM 350

Query: 345  PTLEIREGAIDLLMSVYRDEFKKFGGYLVDMQKAKDRKAAYVNLKRMEKFILAVGTFEDR 524
            PTLEIREGAI+LLM+VY+ EF   GGYL D        A   +L R+E FI AVG++ED+
Sbjct: 351  PTLEIREGAINLLMAVYKKEFPSMGGYLTD--------ACTPDLNRVEHFIQAVGSYEDK 402

Query: 525  IFKKRMDLRQRMIKRLLRE--NAKVIDDQDFEQETPVFQSMIGYLEPKRRNW-FCNPVD- 692
            IF+KR  L QR  +R+ R+   AK  DD D    T +   +  +   +  +    +P + 
Sbjct: 403  IFQKRARLHQRQAERIRRDKAQAKRGDDLDPHVRTDLIVPVARFQGSRLASGSVASPFEQ 462

Query: 693  --STLTSKAKSGCYQTSSGITS-------------NNEDDIVRENTKELEQKLKDFIREK 827
              S   S  K    Q ++ ++S             N+ +   REN ++++  LKD +REK
Sbjct: 463  NGSHKNSTEKGSRAQKAARVSSSDSSLSAALVEAENSLEAQERENKEDMKSMLKDALREK 522

Query: 828  SDLYKQGGLERDRVKLGMHGWKERYYEKNFSAKSPKDVEATCKEIVKKYIEGLCWVLQYY 1007
            SDL+     E D+VKLG  GW+ERYYE  F A++P+ +E   +++V KY EGLCWV+ YY
Sbjct: 523  SDLFNSENPEEDKVKLGEPGWRERYYEDKFGARTPEQIEEIRRDVVLKYTEGLCWVMHYY 582

Query: 1008 FLGVRXXXXXXXXXXXXFASDLKGLSTISISFEMGAPFKPFDQLMGVLPPRSVSALPKPY 1187
            + GV             FASDLKGL  ++I+F +G+PFKPFDQLMGV P  S  ALP  Y
Sbjct: 583  YEGVCSWQWFYPYHYAPFASDLKGLGELNITFNLGSPFKPFDQLMGVFPAASSHALPLQY 642

Query: 1188 WNLMISEESNLAEFYPTDFDVDIEGKRYLWQGIVKLPFINEDLLLSETKKCENELKEDEA 1367
              LM    S + +FYP DF+VD+ GKR+ WQGI KLPFI+E  LL+E KK E+ L  +EA
Sbjct: 643  RKLMSDPNSPIIDFYPIDFEVDMNGKRFSWQGIAKLPFIDESRLLAEIKKVEHTLTPEEA 702

Query: 1368 KRNSEAMNKLFVMRSHVLGSSISSF--YXXXXXXXXXXXXXELIDPHLSGGMNGFICPCD 1541
            +RNS   N LFV  SH L   I S                 EL+DP  SGGMNG+I  C 
Sbjct: 703  RRNSTMYNMLFVNGSHPLSPYIYSLNSKFGHLPDDERNTIKELLDPSASGGMNGYISLCG 762

Query: 1542 DDLG---LANSVFGLKGREEDVVKDDVICVRYECPDNHPHIPRPPMEVTFPEKTITEADI 1712
             D       + V GL    ED++ + VIC  Y+ PD H HI RPP+ V  P+K +   D+
Sbjct: 763  GDPSPPVFRSPVDGL----EDIMDNQVICSIYKLPDPHKHIARPPIGVIIPKKIVEAGDL 818

Query: 1713 EKQP-LWHEYEGHKPPNRLQIQHNCRTAINGGKFTLPNSSSDREVWKGA 1856
            +  P LWHE  G +P +     +N R + N  +   P +   R++ + A
Sbjct: 819  KPPPVLWHEDTGRRPYD--NNNNNRRHSDNSSRQNPPGAMHGRQLGEAA 865


>ref|NP_565114.1| 5'-3' exoribonuclease 3 [Arabidopsis thaliana]
            gi|75262832|sp|Q9FQ03.1|XRN3_ARATH RecName: Full=5'-3'
            exoribonuclease 3; AltName: Full=Protein EXORIBONUCLEASE
            3 gi|11875628|gb|AAG40732.1|AF286719_1 XRN3 [Arabidopsis
            thaliana] gi|332197621|gb|AEE35742.1| 5'-3'
            exoribonuclease 3 [Arabidopsis thaliana]
          Length = 1020

 Score =  477 bits (1228), Expect = e-132
 Identities = 310/756 (41%), Positives = 394/756 (52%), Gaps = 50/756 (6%)
 Frame = +3

Query: 3    GLDADLIMLALATHEVHFSILREDVHAEEQRPISIQALESSLAEFNFSAKVNTIIR---- 170
            GLDADLIML LATHEVHFSILRE V+   Q+       +      N   K          
Sbjct: 231  GLDADLIMLGLATHEVHFSILREVVYTPGQQERCFLCGQMGHFASNCEGKPKKRAGESDE 290

Query: 171  ---GQSLVKKPYQFVNIWTLREYLELDLKIYDPPFVIDLERIVDDFILICFFTGNDFLPH 341
               G   VKKPYQF++IW LREYLEL+++I +PPF IDLERIVDDFI ICFF GNDFLPH
Sbjct: 291  KGDGNDFVKKPYQFLHIWVLREYLELEMRIPNPPFEIDLERIVDDFIFICFFVGNDFLPH 350

Query: 342  MPTLEIREGAIDLLMSVYRDEFKKFGGYLVDMQKAKDRKAAYVNLKRMEKFILAVGTFED 521
            MPTLEIREGAI+LLM+VY+ EF+ F GYL D  K         NLKR+E+FI AVG+FED
Sbjct: 351  MPTLEIREGAINLLMAVYKKEFRSFDGYLTDGCKP--------NLKRVEQFIQAVGSFED 402

Query: 522  RIFKKRMDLRQRMIKRLLRENA-KVIDDQDFEQET------PV--FQSMIGYLEPKRRNW 674
            +IF+KR    QR  +R+ R+ A K     D E  T      PV  F        P    +
Sbjct: 403  KIFQKRAMQHQRQAERVKRDKAGKATKRMDDEAPTVQPDLVPVARFSGSRLASAPTPSPF 462

Query: 675  FCNPVDSTLTSKAKSGCYQTSSGI----TSNNEDDIVRENTKELEQKLKDFIREKSDLYK 842
              N   S    K +     +S G       N+ +   REN +EL+ KLK+ IREKSD + 
Sbjct: 463  QSNDGRSAPHQKVRRLSPGSSVGAAIVDVENSLESDERENKEELKTKLKELIREKSDAFN 522

Query: 843  QGGLERDRVKLGMHGWKERYYEKNFSAKSPKDVEATCKEIVKKYIEGLCWVLQYYFLGVR 1022
                E D+VKLG  GW+ERYYE+ FS  +P+++E   K++V KY EGLCWV+ YY  GV 
Sbjct: 523  SDTTEEDKVKLGQPGWRERYYEEKFSVVTPEEMERVRKDVVLKYTEGLCWVMHYYMEGVC 582

Query: 1023 XXXXXXXXXXXXFASDLKGLSTISISFEMGAPFKPFDQLMGVLPPRSVSALPKPYWNLMI 1202
                        FASDLK L  + I FE+G PFKPF+QL+GV P  S  ALP+ Y  LM 
Sbjct: 583  SWQWFYPYHYAPFASDLKDLGEMDIKFELGTPFKPFNQLLGVFPAASSHALPERYRTLMT 642

Query: 1203 SEESNLAEFYPTDFDVDIEGKRYLWQGIVKLPFINEDLLLSETKKCENELKEDEAKRNSE 1382
               S + +FYPTDF+VD+ GKR+ WQGI KLPFI+E  LL    + E  L ++E +RNS 
Sbjct: 643  DPNSPIIDFYPTDFEVDMNGKRFSWQGIAKLPFIDERRLLEAVSEVEFTLTDEEKRRNSR 702

Query: 1383 AMNKLFVMRSHVLGSSISSF--YXXXXXXXXXXXXXELIDPHLSGGMNGFICPCDDDLGL 1556
              + LF+  SH L   + S   +               I P LS GMNG++ PC  +   
Sbjct: 703  MCDMLFIATSHRLAELVFSLDNHCRQLSARERVDFKVKIKPKLSDGMNGYLTPCSGETHP 762

Query: 1557 ANSVFGLKGREEDVVKDDVICVRYECPDNHPHIPRPPMEVTFPEKTITEADIEKQP-LWH 1733
                  ++G  ED++ + VIC  Y  PD H HI RPP  V FP+KT+   D++  P LWH
Sbjct: 763  PVFRSPMEGM-EDILTNQVICCIYRLPDAHEHITRPPPGVIFPKKTVDIGDLKPPPALWH 821

Query: 1734 EYEGHKPPNRLQIQHNCRTAING-GKFTLPNSSSDREVWKGA----SSGFSAGR------ 1880
            E  G +P +     HN     N  G+   P S S R +   A    S+    G       
Sbjct: 822  EDNGRRPMHNNHGMHNNHGMHNNQGRQNPPGSVSGRHLGNAAHRLVSNSLQMGTDRYQTP 881

Query: 1881 ------GKGYSETSNSHLYYESYSGIRAVDNQKLISTISTSASVKWVSGRG-KGYTESSS 2039
                  G GY+           + G  A    +  +  +   +      RG  G   S  
Sbjct: 882  TDVPAPGYGYNPPQYVPPIPYQHGGYMAPPGAQGYAQPAPYQNRGGYQPRGPSGRFPSEP 941

Query: 2040 YTNQNFARGGQGWSRGGPNQGN---------WSGNG 2120
            Y +Q  +R GQ  SRGG   GN         W G G
Sbjct: 942  YQSQ--SREGQHASRGGGYSGNHQNQHQQQQWHGQG 975