BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Akebia27_contig00000901
         (1881 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002270184.2| PREDICTED: pentatricopeptide repeat-containi...   662   0.0  
ref|XP_007042227.1| Pentatricopeptide repeat superfamily protein...   645   0.0  
ref|XP_004299940.1| PREDICTED: pentatricopeptide repeat-containi...   642   0.0  
ref|XP_007225150.1| hypothetical protein PRUPE_ppa002505mg [Prun...   640   0.0  
ref|XP_004141206.1| PREDICTED: pentatricopeptide repeat-containi...   639   e-180
ref|XP_007042228.1| Pentatricopeptide repeat (PPR) superfamily p...   637   e-180
ref|XP_006826767.1| hypothetical protein AMTR_s00136p00085920 [A...   631   e-178
ref|XP_002299667.2| hypothetical protein POPTR_0001s21880g [Popu...   630   e-178
ref|XP_006431883.1| hypothetical protein CICLE_v10000525mg [Citr...   625   e-176
ref|XP_002529286.1| pentatricopeptide repeat-containing protein,...   625   e-176
ref|XP_006343482.1| PREDICTED: pentatricopeptide repeat-containi...   610   e-172
ref|XP_006417404.1| hypothetical protein EUTSA_v10007006mg [Eutr...   608   e-171
ref|XP_006343484.1| PREDICTED: pentatricopeptide repeat-containi...   605   e-170
ref|XP_006343481.1| PREDICTED: pentatricopeptide repeat-containi...   605   e-170
ref|XP_004250704.1| PREDICTED: pentatricopeptide repeat-containi...   605   e-170
ref|XP_006343483.1| PREDICTED: pentatricopeptide repeat-containi...   605   e-170
ref|XP_007148512.1| hypothetical protein PHAVU_006G214900g [Phas...   602   e-169
ref|XP_003531588.2| PREDICTED: pentatricopeptide repeat-containi...   601   e-169
ref|XP_004486236.1| PREDICTED: pentatricopeptide repeat-containi...   598   e-168
ref|XP_002889841.1| hypothetical protein ARALYDRAFT_888388 [Arab...   596   e-167

>ref|XP_002270184.2| PREDICTED: pentatricopeptide repeat-containing protein At1g10910,
            chloroplastic [Vitis vinifera]
            gi|298204537|emb|CBI23812.3| unnamed protein product
            [Vitis vinifera]
          Length = 659

 Score =  662 bits (1708), Expect = 0.0
 Identities = 330/446 (73%), Positives = 383/446 (85%)
 Frame = -3

Query: 1687 LLAGCIKDKHLYSKALQLLQELKDNGLHMDSVIYGTLLSICASNNRCEEAEAFFQQMKDE 1508
            LLAGC+K KH YSKAL+L+QE++ + L MDSVIYGTLL++CASNNRC+EAE +F QMKDE
Sbjct: 211  LLAGCMKVKHGYSKALELVQEMERSRLPMDSVIYGTLLAVCASNNRCKEAENYFNQMKDE 270

Query: 1507 GFSPNLFHYSALLNAYSMDANYAKADDLVKEMKSTGLVPNKVILTTLLKVYVRAGLFERS 1328
            G  PN+FHYS+LLNAYS D +Y KAD LV++MKS GLVPNKVILTTLLKVYVR GLFE+S
Sbjct: 271  GHLPNVFHYSSLLNAYSADGDYKKADMLVQDMKSAGLVPNKVILTTLLKVYVRGGLFEKS 330

Query: 1327 RELFVELEALGYAEDEMPYCLLMDGFAKAGHIHEAKSIFDEMETKDVKSDGYSHSIMISA 1148
            REL  ELE LGYAEDEMPYCLLMDG AK+  I EAKSIF+EM+ K VKSDGY +SIMISA
Sbjct: 331  RELLAELEDLGYAEDEMPYCLLMDGLAKSRRILEAKSIFEEMKKKQVKSDGYCYSIMISA 390

Query: 1147 FCRSGLLEEAKQLARDFDAKYDKYDLVMLNTMLRAYCRAGEMESVMQMLRKMDELKISPD 968
            FCRSGLL+EAKQLARDF+A YDKYDLVMLNTML AYCRAGEMESVMQM+RKMDEL ISPD
Sbjct: 391  FCRSGLLKEAKQLARDFEATYDKYDLVMLNTMLCAYCRAGEMESVMQMMRKMDELAISPD 450

Query: 967  WNTFHILIKYFFKERLYQLAYKTIVDMHSKGYQPDEELCASLILQLGKVGSSSEAFSIYN 788
            WNTFHILIKYF KE+LY LAY+T+ DMH+KG+QP+EELC+SLI  LGK+ + S+AFS+YN
Sbjct: 451  WNTFHILIKYFCKEKLYLLAYRTMEDMHNKGHQPEEELCSSLISHLGKIRAHSQAFSVYN 510

Query: 787  ILRYSKRTMCKALHGKMLNILVAGGLLKDAYVVVKDNAERISRTSLKKFAISFMKSGNIN 608
            +LRYSKRTMCKALH K+L+ILVAG LLKDAYVVVKDN   IS+ S+KKFA +FMK GN+N
Sbjct: 511  MLRYSKRTMCKALHEKILHILVAGRLLKDAYVVVKDNEGLISKPSIKKFATAFMKFGNVN 570

Query: 607  LINDVMKAVHSSDHKIDQEVFDMAISRYIGQPXXXXXXXXXXQWMTGQGYVVDSSSRNLL 428
            LINDVMKA+H S +KIDQE+F MA++RYI +P          QWM GQGYVVDSS+RN++
Sbjct: 571  LINDVMKAIHGSGYKIDQELFQMAVTRYIAEPEKKELLLHLLQWMPGQGYVVDSSTRNMI 630

Query: 427  LKNSDLFGRHLIADILSKQHKMSKVL 350
            LKNS LFGR LIA++LSKQH  +K L
Sbjct: 631  LKNSHLFGRQLIAEMLSKQHARAKAL 656



 Score = 72.4 bits (176), Expect = 7e-10
 Identities = 74/358 (20%), Positives = 150/358 (41%), Gaps = 5/358 (1%)
 Frame = -3

Query: 1588 YGTLLSICASNNRCEEAEAFFQQMKDEGFSPNLFHYSALLNAYSMDANYAKADDLVKEMK 1409
            Y T +     +    +A   +  ++DE    N+   +++L+    +  +  +  L  +MK
Sbjct: 138  YSTYIKFMGKSLNPIKALEIYNSIQDESVRNNVSVCNSVLSCLIRNGKFENSLKLFHQMK 197

Query: 1408 STGLVPNKVILTTLLK--VYVRAGLFERSRELFVELEALGYAEDEMPYCLLMDGFAKAGH 1235
              GL P+ V  +TLL   + V+ G + ++ EL  E+E      D + Y  L+   A    
Sbjct: 198  QDGLRPDAVTYSTLLAGCMKVKHG-YSKALELVQEMERSRLPMDSVIYGTLLAVCASNNR 256

Query: 1234 IHEAKSIFDEMETKDVKSDGYSHSIMISAFCRSGLLEEAKQLARDFDAKYDKYDLVMLNT 1055
              EA++ F++M+ +    + + +S +++A+   G  ++A  L +D  +     + V+L T
Sbjct: 257  CKEAENYFNQMKDEGHLPNVFHYSSLLNAYSADGDYKKADMLVQDMKSAGLVPNKVILTT 316

Query: 1054 MLRAYCRAGEMESVMQMLRKMDELKISPDWNTFHILIKYFFKERLYQLAYKTIVDMHSKG 875
            +L+ Y R G  E   ++L ++++L  + D   + +L+    K R    A     +M  K 
Sbjct: 317  LLKVYVRGGLFEKSRELLAELEDLGYAEDEMPYCLLMDGLAKSRRILEAKSIFEEMKKKQ 376

Query: 874  YQPDEELCASLILQLGKVGSSSEAFSIYNILRYSKRTMCKALHGKMLNILVAGGLLKDAY 695
             + D    + +I    + G   EA  +      +       +   ML      G ++   
Sbjct: 377  VKSDGYCYSIMISAFCRSGLLKEAKQLARDFEATYDKYDLVMLNTMLCAYCRAGEMESVM 436

Query: 694  VVVKDNAERISRTSLKKFAI---SFMKSGNINLINDVMKAVHSSDHKIDQEVFDMAIS 530
             +++   E         F I    F K     L    M+ +H+  H+ ++E+    IS
Sbjct: 437  QMMRKMDELAISPDWNTFHILIKYFCKEKLYLLAYRTMEDMHNKGHQPEEELCSSLIS 494


>ref|XP_007042227.1| Pentatricopeptide repeat superfamily protein isoform 1 [Theobroma
            cacao] gi|508706162|gb|EOX98058.1| Pentatricopeptide
            repeat superfamily protein isoform 1 [Theobroma cacao]
          Length = 717

 Score =  645 bits (1663), Expect = 0.0
 Identities = 320/447 (71%), Positives = 380/447 (85%)
 Frame = -3

Query: 1687 LLAGCIKDKHLYSKALQLLQELKDNGLHMDSVIYGTLLSICASNNRCEEAEAFFQQMKDE 1508
            LLAGCIK KH +SKAL+L++ELK NGL MDSV+YGTLL++CAS+   EEA+ +F QM++E
Sbjct: 205  LLAGCIKIKHGHSKALELIKELKYNGLKMDSVMYGTLLAVCASSGLHEEAQNYFNQMREE 264

Query: 1507 GFSPNLFHYSALLNAYSMDANYAKADDLVKEMKSTGLVPNKVILTTLLKVYVRAGLFERS 1328
            G SPNL+HYS+LLNAYS D NY KAD+LV++MKS+GLVPNKVILTTLLKVYVR GLFE+S
Sbjct: 265  GHSPNLYHYSSLLNAYSYDGNYCKADELVEQMKSSGLVPNKVILTTLLKVYVRGGLFEKS 324

Query: 1327 RELFVELEALGYAEDEMPYCLLMDGFAKAGHIHEAKSIFDEMETKDVKSDGYSHSIMISA 1148
             +L  ELEALGYAEDEMP+CLLMDG +KAG + EA+S+F EM+ K VKSDGYSHSIMISA
Sbjct: 325  TKLLAELEALGYAEDEMPFCLLMDGLSKAGRLDEARSVFVEMQQKCVKSDGYSHSIMISA 384

Query: 1147 FCRSGLLEEAKQLARDFDAKYDKYDLVMLNTMLRAYCRAGEMESVMQMLRKMDELKISPD 968
             CR+GL EEAK+LA+DF+A+Y+KYDLVMLNTML AYCRAGEMESVMQ ++KMDEL ISPD
Sbjct: 385  LCRAGLFEEAKELAQDFEAQYNKYDLVMLNTMLCAYCRAGEMESVMQTMKKMDELAISPD 444

Query: 967  WNTFHILIKYFFKERLYQLAYKTIVDMHSKGYQPDEELCASLILQLGKVGSSSEAFSIYN 788
            +NTFHILIKYF KE+LY LAYKT+ DMH KGY P+EELC+SLI QLGK+ +  EAFS+YN
Sbjct: 445  YNTFHILIKYFCKEKLYLLAYKTMEDMHGKGYHPEEELCSSLIFQLGKMKAHLEAFSVYN 504

Query: 787  ILRYSKRTMCKALHGKMLNILVAGGLLKDAYVVVKDNAERISRTSLKKFAISFMKSGNIN 608
            +LRYSKRTMCKALH K+L+IL+AG LLKDAYVVVKDNAE IS+ ++ KFA +FMK GNIN
Sbjct: 505  MLRYSKRTMCKALHEKILHILIAGQLLKDAYVVVKDNAELISQPAITKFATAFMKLGNIN 564

Query: 607  LINDVMKAVHSSDHKIDQEVFDMAISRYIGQPXXXXXXXXXXQWMTGQGYVVDSSSRNLL 428
            +INDV+K +H S +KIDQ +F MAISRY+GQP          QWM G GYVVDSS+RN++
Sbjct: 565  MINDVLKVLHGSGYKIDQGLFQMAISRYLGQPEKKELLLQLLQWMPGHGYVVDSSTRNMI 624

Query: 427  LKNSDLFGRHLIADILSKQHKMSKVLR 347
            LKNS L GR L A+ILSKQH MSKV R
Sbjct: 625  LKNSQLLGRQLTAEILSKQHMMSKVSR 651


>ref|XP_004299940.1| PREDICTED: pentatricopeptide repeat-containing protein At1g10910,
            chloroplastic-like [Fragaria vesca subsp. vesca]
          Length = 642

 Score =  642 bits (1656), Expect = 0.0
 Identities = 321/449 (71%), Positives = 376/449 (83%)
 Frame = -3

Query: 1687 LLAGCIKDKHLYSKALQLLQELKDNGLHMDSVIYGTLLSICASNNRCEEAEAFFQQMKDE 1508
            LLAGCIK KH YSKAL+L+QEL++N L MDSVIYGTLL+ICASNN+ EEAE++F+QMKDE
Sbjct: 194  LLAGCIKFKHGYSKALELVQELQNNELQMDSVIYGTLLAICASNNKWEEAESYFKQMKDE 253

Query: 1507 GFSPNLFHYSALLNAYSMDANYAKADDLVKEMKSTGLVPNKVILTTLLKVYVRAGLFERS 1328
            G  PN FHYS+LLNAYS+  NY KADD+V++MKS GLVPNKV LTTLLK YVR GLFE+S
Sbjct: 254  GHLPNEFHYSSLLNAYSISGNYKKADDVVQDMKSAGLVPNKVTLTTLLKAYVRGGLFEKS 313

Query: 1327 RELFVELEALGYAEDEMPYCLLMDGFAKAGHIHEAKSIFDEMETKDVKSDGYSHSIMISA 1148
            REL  ELEALGYAEDEMPYC+LMD FAKAG I +AK +FDE++ K V+SDGYS+SIMISA
Sbjct: 314  RELLTELEALGYAEDEMPYCILMDAFAKAGRIEDAKLVFDEIKEKSVRSDGYSYSIMISA 373

Query: 1147 FCRSGLLEEAKQLARDFDAKYDKYDLVMLNTMLRAYCRAGEMESVMQMLRKMDELKISPD 968
            FCR GL+++AKQLA+DF+  YDKYDLVMLNTM+ AYCRAGEM+SVM+MLRKMDELKI+PD
Sbjct: 374  FCRGGLVDDAKQLAKDFERTYDKYDLVMLNTMICAYCRAGEMDSVMEMLRKMDELKITPD 433

Query: 967  WNTFHILIKYFFKERLYQLAYKTIVDMHSKGYQPDEELCASLILQLGKVGSSSEAFSIYN 788
             NTFHILIKYF KE+LY LAYKT+ DMH+KGY PDEELC+SL+  LGK+ + SEA+SIYN
Sbjct: 434  NNTFHILIKYFCKEKLYMLAYKTMEDMHNKGYPPDEELCSSLMFHLGKIRAYSEAYSIYN 493

Query: 787  ILRYSKRTMCKALHGKMLNILVAGGLLKDAYVVVKDNAERISRTSLKKFAISFMKSGNIN 608
            ILRYSKRTMCKALH K+L+ILVAG LLKDAYVVVKDN   IS+ +  KFA +FMK GNIN
Sbjct: 494  ILRYSKRTMCKALHEKILHILVAGRLLKDAYVVVKDNPRLISKAATMKFATAFMKLGNIN 553

Query: 607  LINDVMKAVHSSDHKIDQEVFDMAISRYIGQPXXXXXXXXXXQWMTGQGYVVDSSSRNLL 428
            LINDV+KA+  S  KIDQ +F MAISRYI  P          QWM GQGY VDSS+RNL+
Sbjct: 554  LINDVLKAIDGSGCKIDQGIFQMAISRYISDPDKKDLLLQLLQWMPGQGYTVDSSTRNLI 613

Query: 427  LKNSDLFGRHLIADILSKQHKMSKVLRTQ 341
            LKNS LF R  IA++LSKQH +SK  +++
Sbjct: 614  LKNSHLFDRQHIAEMLSKQHMISKASKSK 642



 Score = 70.5 bits (171), Expect = 3e-09
 Identities = 71/376 (18%), Positives = 153/376 (40%), Gaps = 4/376 (1%)
 Frame = -3

Query: 1639 QLLQELKDNGLHMDSVIYGTLLSICASNNRCEEAEAFFQQMKDEGFSPNLFHYSALLNAY 1460
            QL + ++ NG  + +  Y + +     +    +A   +  ++DE    N+   +++L + 
Sbjct: 105  QLFEWMQQNG-KVSASSYSSYIKFMGKSLNPVKALEIYNSIQDESTKKNVHICNSVLGSL 163

Query: 1459 SMDANYAKADDLVKEMKSTGLVPNKVILTTLLKVYVR-AGLFERSRELFVELEALGYAED 1283
                 +  +  L  +MK  GL P+ V  +TLL   ++    + ++ EL  EL+      D
Sbjct: 164  VRSGKFDGSIKLFHQMKQDGLTPDAVTYSTLLAGCIKFKHGYSKALELVQELQNNELQMD 223

Query: 1282 EMPYCLLMDGFAKAGHIHEAKSIFDEMETKDVKSDGYSHSIMISAFCRSGLLEEAKQLAR 1103
             + Y  L+   A      EA+S F +M+ +    + + +S +++A+  SG  ++A  + +
Sbjct: 224  SVIYGTLLAICASNNKWEEAESYFKQMKDEGHLPNEFHYSSLLNAYSISGNYKKADDVVQ 283

Query: 1102 DFDAKYDKYDLVMLNTMLRAYCRAGEMESVMQMLRKMDELKISPDWNTFHILIKYFFKER 923
            D  +     + V L T+L+AY R G  E   ++L +++ L                    
Sbjct: 284  DMKSAGLVPNKVTLTTLLKAYVRGGLFEKSRELLTELEAL-------------------- 323

Query: 922  LYQLAYKTIVDMHSKGYQPDEELCASLILQLGKVGSSSEAFSIYNILRYSKRTMCKALHG 743
                           GY  DE     L+    K G   +A  +++ ++          + 
Sbjct: 324  ---------------GYAEDEMPYCILMDAFAKAGRIEDAKLVFDEIKEKSVRSDGYSYS 368

Query: 742  KMLNILVAGGLLKDAYVVVKD---NAERISRTSLKKFAISFMKSGNINLINDVMKAVHSS 572
             M++    GGL+ DA  + KD     ++     L     ++ ++G ++ + ++++ +   
Sbjct: 369  IMISAFCRGGLVDDAKQLAKDFERTYDKYDLVMLNTMICAYCRAGEMDSVMEMLRKMDEL 428

Query: 571  DHKIDQEVFDMAISRY 524
                D   F + I  +
Sbjct: 429  KITPDNNTFHILIKYF 444


>ref|XP_007225150.1| hypothetical protein PRUPE_ppa002505mg [Prunus persica]
            gi|462422086|gb|EMJ26349.1| hypothetical protein
            PRUPE_ppa002505mg [Prunus persica]
          Length = 664

 Score =  640 bits (1651), Expect = 0.0
 Identities = 315/451 (69%), Positives = 382/451 (84%)
 Frame = -3

Query: 1687 LLAGCIKDKHLYSKALQLLQELKDNGLHMDSVIYGTLLSICASNNRCEEAEAFFQQMKDE 1508
            LLAGC K KH YSKAL+L+QEL+ N L MDSVIYGTLL++CASNN+ EEAE +F+QMK+E
Sbjct: 210  LLAGCNKVKHGYSKALELVQELQRNELQMDSVIYGTLLAVCASNNKLEEAEGYFKQMKNE 269

Query: 1507 GFSPNLFHYSALLNAYSMDANYAKADDLVKEMKSTGLVPNKVILTTLLKVYVRAGLFERS 1328
            G+ PN+FHYSA+LNAYS+  NY +ADDLV++MKS GLVPNKVILTTLLKVYVR GLFE+S
Sbjct: 270  GYLPNVFHYSAMLNAYSISGNYKEADDLVQDMKSAGLVPNKVILTTLLKVYVRGGLFEKS 329

Query: 1327 RELFVELEALGYAEDEMPYCLLMDGFAKAGHIHEAKSIFDEMETKDVKSDGYSHSIMISA 1148
            REL  ELEALGYAEDEMPYCLLMD  AKAG IHEAK +FDEM+ K ++S+GYS+SIMISA
Sbjct: 330  RELLAELEALGYAEDEMPYCLLMDALAKAGRIHEAKLVFDEMKEKSIRSNGYSYSIMISA 389

Query: 1147 FCRSGLLEEAKQLARDFDAKYDKYDLVMLNTMLRAYCRAGEMESVMQMLRKMDELKISPD 968
            FCR GLLE+AKQL++D +  +DK+DLVMLNTM+ AYCRAGEM+SVM+M+RKMDE KI+PD
Sbjct: 390  FCRGGLLEDAKQLSKDVERTHDKFDLVMLNTMICAYCRAGEMDSVMEMMRKMDEQKITPD 449

Query: 967  WNTFHILIKYFFKERLYQLAYKTIVDMHSKGYQPDEELCASLILQLGKVGSSSEAFSIYN 788
            +NTFHILIKYF KE+LY LAY+T+ DMH+KG+QPDEELC+SL+  LGK+ + SEA+S+YN
Sbjct: 450  YNTFHILIKYFCKEKLYLLAYQTMEDMHNKGHQPDEELCSSLMFLLGKIRAYSEAYSVYN 509

Query: 787  ILRYSKRTMCKALHGKMLNILVAGGLLKDAYVVVKDNAERISRTSLKKFAISFMKSGNIN 608
            ILRYSKRTMCKALH K+L+IL+AG LLKDAYVVVKDNA  IS+ ++KKF+ +F+K GNIN
Sbjct: 510  ILRYSKRTMCKALHEKILHILLAGQLLKDAYVVVKDNAGLISKPAVKKFSTAFLKLGNIN 569

Query: 607  LINDVMKAVHSSDHKIDQEVFDMAISRYIGQPXXXXXXXXXXQWMTGQGYVVDSSSRNLL 428
            LINDV+K + +S  KIDQ +F MAISRYI  P           WM GQGYVVDS++RNL+
Sbjct: 570  LINDVLKVIDASGCKIDQGLFQMAISRYIALPEKKELLIQMLLWMPGQGYVVDSATRNLI 629

Query: 427  LKNSDLFGRHLIADILSKQHKMSKVLRTQAK 335
            LKNS LFGR  IAD+LSKQH +SK  +++ K
Sbjct: 630  LKNSHLFGRQHIADVLSKQHMISKASKSRKK 660



 Score = 78.6 bits (192), Expect = 9e-12
 Identities = 77/377 (20%), Positives = 155/377 (41%), Gaps = 5/377 (1%)
 Frame = -3

Query: 1639 QLLQELKDNGLHMDSVIYGTLLSICASNNRCEEAEAFFQQMKDEGFSPNLFHYSALLNAY 1460
            QL + ++ NG  + +  Y + +     +    +A   +  ++D     N+   +++L + 
Sbjct: 121  QLFEWMQQNG-KISASSYSSYIKFMGKSLNPVKALEIYNNIQDASTKKNVHICNSVLGSL 179

Query: 1459 SMDANYAKADDLVKEMKSTGLVPNKVILTTLLK--VYVRAGLFERSRELFVELEALGYAE 1286
                 +  +  L  +MK  GL P+ V  +TLL     V+ G + ++ EL  EL+      
Sbjct: 180  IRSGKFDGSFKLFHQMKQDGLTPDAVTYSTLLAGCNKVKHG-YSKALELVQELQRNELQM 238

Query: 1285 DEMPYCLLMDGFAKAGHIHEAKSIFDEMETKDVKSDGYSHSIMISAFCRSGLLEEAKQLA 1106
            D + Y  L+   A    + EA+  F +M+ +    + + +S M++A+  SG  +EA  L 
Sbjct: 239  DSVIYGTLLAVCASNNKLEEAEGYFKQMKNEGYLPNVFHYSAMLNAYSISGNYKEADDLV 298

Query: 1105 RDFDAKYDKYDLVMLNTMLRAYCRAGEMESVMQMLRKMDELKISPDWNTFHILIKYFFKE 926
            +D  +     + V+L T+L+ Y R G  E   ++L +++ L                   
Sbjct: 299  QDMKSAGLVPNKVILTTLLKVYVRGGLFEKSRELLAELEAL------------------- 339

Query: 925  RLYQLAYKTIVDMHSKGYQPDEELCASLILQLGKVGSSSEAFSIYNILRYSKRTMCKALH 746
                            GY  DE     L+  L K G   EA  +++ ++          +
Sbjct: 340  ----------------GYAEDEMPYCLLMDALAKAGRIHEAKLVFDEMKEKSIRSNGYSY 383

Query: 745  GKMLNILVAGGLLKDAYVVVKD---NAERISRTSLKKFAISFMKSGNINLINDVMKAVHS 575
              M++    GGLL+DA  + KD     ++     L     ++ ++G ++ + ++M+ +  
Sbjct: 384  SIMISAFCRGGLLEDAKQLSKDVERTHDKFDLVMLNTMICAYCRAGEMDSVMEMMRKMDE 443

Query: 574  SDHKIDQEVFDMAISRY 524
                 D   F + I  +
Sbjct: 444  QKITPDYNTFHILIKYF 460


>ref|XP_004141206.1| PREDICTED: pentatricopeptide repeat-containing protein At1g10910,
            chloroplastic-like [Cucumis sativus]
          Length = 668

 Score =  639 bits (1647), Expect = e-180
 Identities = 312/451 (69%), Positives = 382/451 (84%)
 Frame = -3

Query: 1687 LLAGCIKDKHLYSKALQLLQELKDNGLHMDSVIYGTLLSICASNNRCEEAEAFFQQMKDE 1508
            +L GCI+ KH Y+KA++LL+EL+DNGL MD V YGTL++ICAS+NR E+AE FF QM+ E
Sbjct: 213  MLTGCIRVKHGYAKAMELLKELQDNGLCMDCVSYGTLIAICASHNRLEDAERFFNQMRAE 272

Query: 1507 GFSPNLFHYSALLNAYSMDANYAKADDLVKEMKSTGLVPNKVILTTLLKVYVRAGLFERS 1328
            G SPN+FHY +LLNAYS++ +Y KAD+L+++MK TGLVPNKVILTTLLKVYVR GLFE+S
Sbjct: 273  GHSPNMFHYGSLLNAYSINGDYKKADELIEDMKLTGLVPNKVILTTLLKVYVRGGLFEKS 332

Query: 1327 RELFVELEALGYAEDEMPYCLLMDGFAKAGHIHEAKSIFDEMETKDVKSDGYSHSIMISA 1148
            R+L  ELE+LGY E+EMPYCLLMDG AKAG I EAK++FDEM+ K+VK+DGY+HSIMISA
Sbjct: 333  RKLLSELESLGYGENEMPYCLLMDGLAKAGSIREAKTVFDEMKAKNVKTDGYAHSIMISA 392

Query: 1147 FCRSGLLEEAKQLARDFDAKYDKYDLVMLNTMLRAYCRAGEMESVMQMLRKMDELKISPD 968
            FCR GLLEEAK LA+DF+A YD+YD+V+LNTML AYCRAGEMESVMQMLRKMD+L ISPD
Sbjct: 393  FCRGGLLEEAKLLAKDFEATYDRYDIVILNTMLCAYCRAGEMESVMQMLRKMDDLAISPD 452

Query: 967  WNTFHILIKYFFKERLYQLAYKTIVDMHSKGYQPDEELCASLILQLGKVGSSSEAFSIYN 788
            +NTFHILIKYFFKE+LY L Y+T+ DMH KG+QP+EELC+SLIL LG + + SEAFS+YN
Sbjct: 453  YNTFHILIKYFFKEKLYLLCYRTLEDMHRKGHQPEEELCSSLILSLGNIRAYSEAFSVYN 512

Query: 787  ILRYSKRTMCKALHGKMLNILVAGGLLKDAYVVVKDNAERISRTSLKKFAISFMKSGNIN 608
            IL+YSKRTMCKALH K+L+IL+AG LLKDAYVVVKDNA  IS+ +++KFA  FMK GN+N
Sbjct: 513  ILKYSKRTMCKALHEKILHILIAGRLLKDAYVVVKDNAGVISKPAIRKFAFGFMKFGNVN 572

Query: 607  LINDVMKAVHSSDHKIDQEVFDMAISRYIGQPXXXXXXXXXXQWMTGQGYVVDSSSRNLL 428
            LINDVMKA+H S +KIDQ++F +A SRYI  P          +WM GQGYVVDSS+RNL+
Sbjct: 573  LINDVMKAIHGSGYKIDQDLFMIATSRYIELPEKKDLFIQLLKWMPGQGYVVDSSTRNLI 632

Query: 427  LKNSDLFGRHLIADILSKQHKMSKVLRTQAK 335
            LKN+ LFGR LIA+ILSK   +SK  +++ K
Sbjct: 633  LKNAHLFGRQLIAEILSKHSLLSKSTKSREK 663


>ref|XP_007042228.1| Pentatricopeptide repeat (PPR) superfamily protein isoform 2
            [Theobroma cacao] gi|508706163|gb|EOX98059.1|
            Pentatricopeptide repeat (PPR) superfamily protein
            isoform 2 [Theobroma cacao]
          Length = 649

 Score =  637 bits (1644), Expect = e-180
 Identities = 319/448 (71%), Positives = 379/448 (84%)
 Frame = -3

Query: 1687 LLAGCIKDKHLYSKALQLLQELKDNGLHMDSVIYGTLLSICASNNRCEEAEAFFQQMKDE 1508
            LLAGCIK KH +SKAL+L++ELK NGL MDSV+YGTLL++CAS+   EEA+ +F QM++E
Sbjct: 205  LLAGCIKIKHGHSKALELIKELKYNGLKMDSVMYGTLLAVCASSGLHEEAQNYFNQMREE 264

Query: 1507 GFSPNLFHYSALLNAYSMDANYAKADDLVKEMKSTGLVPNKVILTTLLKVYVRAGLFERS 1328
            G SPNL+HYS+LLNAYS D NY KAD+LV++MKS+GLVPNKVILTTLLKVYVR GLFE+S
Sbjct: 265  GHSPNLYHYSSLLNAYSYDGNYCKADELVEQMKSSGLVPNKVILTTLLKVYVRGGLFEKS 324

Query: 1327 RELFVELEALGYAEDEMPYCLLMDGFAKAGHIHEAKSIFDEMETKDVKSDGYSHSIMISA 1148
             +L  ELEALGYAEDEMP+CLLMDG +KAG + EA+S+F EM+ K VKSDGYSHSIMISA
Sbjct: 325  TKLLAELEALGYAEDEMPFCLLMDGLSKAGRLDEARSVFVEMQQKCVKSDGYSHSIMISA 384

Query: 1147 FCRSGLLEEAKQLARDFDAKYDKYDLVMLNTMLRAYCRAGEMESVMQMLRKMDELKISPD 968
             CR+GL EEAK+LA+DF+A+Y+KYDLVMLNTML AYCRAGEMESVMQ ++KMDEL ISPD
Sbjct: 385  LCRAGLFEEAKELAQDFEAQYNKYDLVMLNTMLCAYCRAGEMESVMQTMKKMDELAISPD 444

Query: 967  WNTFHILIKYFFKERLYQLAYKTIVDMHSKGYQPDEELCASLILQLGKVGSSSEAFSIYN 788
            +NTFHILIKYF KE+LY LAYKT+ DMH KGY P+EELC+SLI QLGK+ +  EAFS+YN
Sbjct: 445  YNTFHILIKYFCKEKLYLLAYKTMEDMHGKGYHPEEELCSSLIFQLGKMKAHLEAFSVYN 504

Query: 787  ILRYSKRTMCKALHGKMLNILVAGGLLKDAYVVVKDNAERISRTSLKKFAISFMKSGNIN 608
            +LRYSKRTMCKALH K+L+IL+AG LLKDAYVVVKDNAE IS+ ++ KFA +FMK GNIN
Sbjct: 505  MLRYSKRTMCKALHEKILHILIAGQLLKDAYVVVKDNAELISQPAITKFATAFMKLGNIN 564

Query: 607  LINDVMKAVHSSDHKIDQEVFDMAISRYIGQPXXXXXXXXXXQWMTGQGYVVDSSSRNLL 428
            +INDV+K +H S +KIDQ    MAISRY+GQP          QWM G GYVVDSS+RN++
Sbjct: 565  MINDVLKVLHGSGYKIDQ----MAISRYLGQPEKKELLLQLLQWMPGHGYVVDSSTRNMI 620

Query: 427  LKNSDLFGRHLIADILSKQHKMSKVLRT 344
            LKNS L GR L A+ILSKQH MSKV R+
Sbjct: 621  LKNSQLLGRQLTAEILSKQHMMSKVSRS 648


>ref|XP_006826767.1| hypothetical protein AMTR_s00136p00085920 [Amborella trichopoda]
            gi|548831187|gb|ERM94004.1| hypothetical protein
            AMTR_s00136p00085920 [Amborella trichopoda]
          Length = 690

 Score =  631 bits (1628), Expect = e-178
 Identities = 309/450 (68%), Positives = 383/450 (85%)
 Frame = -3

Query: 1687 LLAGCIKDKHLYSKALQLLQELKDNGLHMDSVIYGTLLSICASNNRCEEAEAFFQQMKDE 1508
            LLAGC K+K+ YS+ALQL++ELK +GL MDSVIYG+LL+ICASNN+CEEAE FFQQM+ E
Sbjct: 238  LLAGCNKNKNGYSQALQLIKELKISGLCMDSVIYGSLLAICASNNQCEEAETFFQQMRAE 297

Query: 1507 GFSPNLFHYSALLNAYSMDANYAKADDLVKEMKSTGLVPNKVILTTLLKVYVRAGLFERS 1328
            GFSPN+FHYS+LLNAY+++ N+ KAD LV+++KS GLVPNKVILTTLLKVYVR   F++S
Sbjct: 298  GFSPNIFHYSSLLNAYAVEGNHKKADKLVEDIKSAGLVPNKVILTTLLKVYVRGCFFDKS 357

Query: 1327 RELFVELEALGYAEDEMPYCLLMDGFAKAGHIHEAKSIFDEMETKDVKSDGYSHSIMISA 1148
            REL  EL+ LG+A DEMPYCLLMDG AKAGHI EAK++F++M+ K+VKSDGYSHSI+ISA
Sbjct: 358  RELLAELDTLGFARDEMPYCLLMDGLAKAGHIDEAKAVFEDMKQKNVKSDGYSHSIIISA 417

Query: 1147 FCRSGLLEEAKQLARDFDAKYDKYDLVMLNTMLRAYCRAGEMESVMQMLRKMDELKISPD 968
            +CR GLLEEAK LA+DF++   KYDLVMLNT+LRAYC+ GEM+ VMQ ++KMDEL ISPD
Sbjct: 418  YCREGLLEEAKLLAKDFESTSGKYDLVMLNTLLRAYCKGGEMQYVMQTMKKMDELAISPD 477

Query: 967  WNTFHILIKYFFKERLYQLAYKTIVDMHSKGYQPDEELCASLILQLGKVGSSSEAFSIYN 788
             +TF ILIKYF KE+LY LAY+T+ DMH++G Q DEELC SLIL+LGK G++SEA+S+YN
Sbjct: 478  LHTFSILIKYFSKEKLYNLAYRTVEDMHARGLQIDEELCTSLILELGKAGAASEAYSVYN 537

Query: 787  ILRYSKRTMCKALHGKMLNILVAGGLLKDAYVVVKDNAERISRTSLKKFAISFMKSGNIN 608
             LRY+KRT+CKALH K+L ILVAG LLKDAYV+VKDN+E IS+++L KF  SFMK GNIN
Sbjct: 538  KLRYTKRTLCKALHEKVLKILVAGRLLKDAYVLVKDNSELISKSALDKFVTSFMKFGNIN 597

Query: 607  LINDVMKAVHSSDHKIDQEVFDMAISRYIGQPXXXXXXXXXXQWMTGQGYVVDSSSRNLL 428
            LINDV++A+H++ + I+Q VF +A+SRY+G+P          +WM+GQGYVVDS SRNLL
Sbjct: 598  LINDVLRALHNNGYLINQGVFSLAVSRYVGEPEKKELLLHMLEWMSGQGYVVDSESRNLL 657

Query: 427  LKNSDLFGRHLIADILSKQHKMSKVLRTQA 338
            LKN DLFG+ LIA+ LSKQH MSK+ RTQA
Sbjct: 658  LKNCDLFGKQLIAEGLSKQHAMSKIRRTQA 687



 Score = 72.0 bits (175), Expect = 9e-10
 Identities = 71/351 (20%), Positives = 145/351 (41%), Gaps = 4/351 (1%)
 Frame = -3

Query: 1588 YGTLLSICASNNRCEEAEAFFQQMKDEGFSPNLFHYSALLNAYSMDANYAKADDLVKEMK 1409
            Y + +     +    +A   +Q +KDE    ++   +++L   + +  +  +  L ++MK
Sbjct: 165  YSSFIKYMGRSGNTVKALQVYQSIKDEPTLYDVTVCNSILGCLARNGKFESSIKLFEQMK 224

Query: 1408 STGLVPNKVILTTLLK-VYVRAGLFERSRELFVELEALGYAEDEMPYCLLMDGFAKAGHI 1232
              GL P+ V  ++LL         + ++ +L  EL+  G   D + Y  L+   A     
Sbjct: 225  KGGLTPDTVTYSSLLAGCNKNKNGYSQALQLIKELKISGLCMDSVIYGSLLAICASNNQC 284

Query: 1231 HEAKSIFDEMETKDVKSDGYSHSIMISAFCRSGLLEEAKQLARDFDAKYDKYDLVMLNTM 1052
             EA++ F +M  +    + + +S +++A+   G  ++A +L  D  +     + V+L T+
Sbjct: 285  EEAETFFQQMRAEGFSPNIFHYSSLLNAYAVEGNHKKADKLVEDIKSAGLVPNKVILTTL 344

Query: 1051 LRAYCRAGEMESVMQMLRKMDELKISPDWNTFHILIKYFFKERLYQLAYKTIVDMHSKGY 872
            L+ Y R    +   ++L ++D L  + D   + +L+    K      A     DM  K  
Sbjct: 345  LKVYVRGCFFDKSRELLAELDTLGFARDEMPYCLLMDGLAKAGHIDEAKAVFEDMKQKNV 404

Query: 871  QPDEELCASLILQLGKVGSSSEAFSIYNILRYSKRTMCKALHGKMLNILVAGGLLKDAYV 692
            + D    + +I    + G   EA  +      +       +   +L     GG ++    
Sbjct: 405  KSDGYSHSIIISAYCREGLLEEAKLLAKDFESTSGKYDLVMLNTLLRAYCKGGEMQYVMQ 464

Query: 691  VVKDNAERISRTSLKKFAI---SFMKSGNINLINDVMKAVHSSDHKIDQEV 548
             +K   E      L  F+I    F K    NL    ++ +H+   +ID+E+
Sbjct: 465  TMKKMDELAISPDLHTFSILIKYFSKEKLYNLAYRTVEDMHARGLQIDEEL 515


>ref|XP_002299667.2| hypothetical protein POPTR_0001s21880g [Populus trichocarpa]
            gi|550347847|gb|EEE84472.2| hypothetical protein
            POPTR_0001s21880g [Populus trichocarpa]
          Length = 673

 Score =  630 bits (1625), Expect = e-178
 Identities = 312/449 (69%), Positives = 378/449 (84%)
 Frame = -3

Query: 1687 LLAGCIKDKHLYSKALQLLQELKDNGLHMDSVIYGTLLSICASNNRCEEAEAFFQQMKDE 1508
            LLAGC+K K  YSKAL L+QEL  NGL MDS++YGTLL++CASNNRCEEA+++F QMKDE
Sbjct: 225  LLAGCMKIKDGYSKALDLVQELNYNGLQMDSIMYGTLLAVCASNNRCEEAQSYFNQMKDE 284

Query: 1507 GFSPNLFHYSALLNAYSMDANYAKADDLVKEMKSTGLVPNKVILTTLLKVYVRAGLFERS 1328
            G SPN+FHYS+LLNAYS D NY KA++LV++MKS+GLVPNKVILTTLLKVYVR GLFE+S
Sbjct: 285  GHSPNIFHYSSLLNAYSSDGNYKKAEELVQDMKSSGLVPNKVILTTLLKVYVRGGLFEKS 344

Query: 1327 RELFVELEALGYAEDEMPYCLLMDGFAKAGHIHEAKSIFDEMETKDVKSDGYSHSIMISA 1148
            R+L VEL+ LG+A++EMPYCLLMDG AK G + EA+S+F+EM+ K VKS GYS+SIMIS+
Sbjct: 345  RDLLVELDTLGFAKNEMPYCLLMDGLAKNGLLDEARSVFNEMKEKRVKSGGYSYSIMISS 404

Query: 1147 FCRSGLLEEAKQLARDFDAKYDKYDLVMLNTMLRAYCRAGEMESVMQMLRKMDELKISPD 968
            FCR GL EEAK+LA +F+AKYDKYD+V+LNT+L AYCR GE ESVM+ +RKMDEL ISPD
Sbjct: 405  FCRGGLFEEAKELAEEFEAKYDKYDVVILNTILCAYCRTGEKESVMRTMRKMDELAISPD 464

Query: 967  WNTFHILIKYFFKERLYQLAYKTIVDMHSKGYQPDEELCASLILQLGKVGSSSEAFSIYN 788
            +NTFHILIKYF KE+LY LAY+T+ DMH KG+QP EELC+SLIL LGK+ + +EAFS+Y+
Sbjct: 465  YNTFHILIKYFCKEKLYMLAYQTMEDMHRKGHQPMEELCSSLILHLGKIKAHAEAFSVYS 524

Query: 787  ILRYSKRTMCKALHGKMLNILVAGGLLKDAYVVVKDNAERISRTSLKKFAISFMKSGNIN 608
            +L+ SKRTM KA H  +L+IL+AG LLKDAYVVVKDNAE IS  ++KKFA SF+K G+IN
Sbjct: 525  MLKSSKRTMSKAFHEDILHILIAGRLLKDAYVVVKDNAELISPAAIKKFASSFVKLGDIN 584

Query: 607  LINDVMKAVHSSDHKIDQEVFDMAISRYIGQPXXXXXXXXXXQWMTGQGYVVDSSSRNLL 428
            LINDVMK +H S +KIDQE+F MA+SRYI +P          QWM GQGYVVDSS+RNL+
Sbjct: 585  LINDVMKVIHGSGYKIDQELFLMAVSRYIAEPEKKDLLIQLLQWMPGQGYVVDSSTRNLI 644

Query: 427  LKNSDLFGRHLIADILSKQHKMSKVLRTQ 341
            LKNS LFGR LIA+ILSKQH  SK L+ Q
Sbjct: 645  LKNSHLFGRQLIAEILSKQHMTSKALKAQ 673



 Score = 66.6 bits (161), Expect = 4e-08
 Identities = 52/263 (19%), Positives = 113/263 (42%), Gaps = 1/263 (0%)
 Frame = -3

Query: 1483 YSALLNAYSMDANYAKADDLVKEMKSTGLVPNKVILTTLLKVYVRAGLFERSRELFVELE 1304
            YS+ +       N AKA ++   +       N  I  +LL+  VR   F+ S + F +++
Sbjct: 152  YSSYIKFMGTSLNPAKALEIYHSIPDESKKTNVFICNSLLRCLVRNTKFDSSMKFFHKMK 211

Query: 1303 ALGYAEDEMPYCLLMDGFAK-AGHIHEAKSIFDEMETKDVKSDGYSHSIMISAFCRSGLL 1127
              G   D + Y  L+ G  K      +A  +  E+    ++ D   +  +++    +   
Sbjct: 212  NNGLTPDAITYSTLLAGCMKIKDGYSKALDLVQELNYNGLQMDSIMYGTLLAVCASNNRC 271

Query: 1126 EEAKQLARDFDAKYDKYDLVMLNTMLRAYCRAGEMESVMQMLRKMDELKISPDWNTFHIL 947
            EEA+        +    ++   +++L AY   G  +   ++++ M    + P+      L
Sbjct: 272  EEAQSYFNQMKDEGHSPNIFHYSSLLNAYSSDGNYKKAEELVQDMKSSGLVPNKVILTTL 331

Query: 946  IKYFFKERLYQLAYKTIVDMHSKGYQPDEELCASLILQLGKVGSSSEAFSIYNILRYSKR 767
            +K + +  L++ +   +V++ + G+  +E     L+  L K G   EA S++N ++  + 
Sbjct: 332  LKVYVRGGLFEKSRDLLVELDTLGFAKNEMPYCLLMDGLAKNGLLDEARSVFNEMKEKRV 391

Query: 766  TMCKALHGKMLNILVAGGLLKDA 698
                  +  M++    GGL ++A
Sbjct: 392  KSGGYSYSIMISSFCRGGLFEEA 414


>ref|XP_006431883.1| hypothetical protein CICLE_v10000525mg [Citrus clementina]
            gi|557534005|gb|ESR45123.1| hypothetical protein
            CICLE_v10000525mg [Citrus clementina]
          Length = 660

 Score =  625 bits (1611), Expect = e-176
 Identities = 304/448 (67%), Positives = 377/448 (84%)
 Frame = -3

Query: 1687 LLAGCIKDKHLYSKALQLLQELKDNGLHMDSVIYGTLLSICASNNRCEEAEAFFQQMKDE 1508
            LL GCIKDK+ YSKAL+L+QELK NG  MD+V+YG LL+ICASNN C +A+++F QMK E
Sbjct: 210  LLTGCIKDKNGYSKALELVQELKYNGAQMDNVMYGILLAICASNNLCAKAQSYFNQMKVE 269

Query: 1507 GFSPNLFHYSALLNAYSMDANYAKADDLVKEMKSTGLVPNKVILTTLLKVYVRAGLFERS 1328
            G SPN++HYS+LLNAYS   +Y KAD+L+++MKS+GLVPNKVILTTLLKVYVR GLFE+S
Sbjct: 270  GHSPNVYHYSSLLNAYSSGGDYTKADELIQDMKSSGLVPNKVILTTLLKVYVRGGLFEKS 329

Query: 1327 RELFVELEALGYAEDEMPYCLLMDGFAKAGHIHEAKSIFDEMETKDVKSDGYSHSIMISA 1148
            REL  EL+ LGYAE+EMPYCLLMDG +KAG + EA+ +F+EM+ K VKSDGY+HSIMISA
Sbjct: 330  RELLAELDTLGYAENEMPYCLLMDGLSKAGCLDEARVVFNEMQEKCVKSDGYAHSIMISA 389

Query: 1147 FCRSGLLEEAKQLARDFDAKYDKYDLVMLNTMLRAYCRAGEMESVMQMLRKMDELKISPD 968
            FCR G  EEAKQLA DF+AKYDKYD+V+LN+ML AYCR G+MESVM ++RK+DEL ISPD
Sbjct: 390  FCRGGCFEEAKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELAISPD 449

Query: 967  WNTFHILIKYFFKERLYQLAYKTIVDMHSKGYQPDEELCASLILQLGKVGSSSEAFSIYN 788
            +NTFHILIKYF KE++Y LAY+T+VDMH KG+QP+EELC+SLI  LGK+ + SEA S+YN
Sbjct: 450  YNTFHILIKYFCKEKMYILAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEALSVYN 509

Query: 787  ILRYSKRTMCKALHGKMLNILVAGGLLKDAYVVVKDNAERISRTSLKKFAISFMKSGNIN 608
            +LRYSKR+MCKALH K+L+IL++G LLKDAYVVVKDN+E IS   +KKFA +F++ GNIN
Sbjct: 510  MLRYSKRSMCKALHEKILHILISGKLLKDAYVVVKDNSESISHPVIKKFASAFVRLGNIN 569

Query: 607  LINDVMKAVHSSDHKIDQEVFDMAISRYIGQPXXXXXXXXXXQWMTGQGYVVDSSSRNLL 428
            L+NDVMKA+H++ ++IDQ +F +AI+RYI +           +WMTGQGYVVDSS+RNL+
Sbjct: 570  LVNDVMKAIHTTGYRIDQGIFHIAIARYIAEREKKELLLKLLEWMTGQGYVVDSSTRNLI 629

Query: 427  LKNSDLFGRHLIADILSKQHKMSKVLRT 344
            LKNS L GR LIADILSKQH  SK  +T
Sbjct: 630  LKNSHLLGRQLIADILSKQHMKSKSSKT 657


>ref|XP_002529286.1| pentatricopeptide repeat-containing protein, putative [Ricinus
            communis] gi|223531275|gb|EEF33118.1| pentatricopeptide
            repeat-containing protein, putative [Ricinus communis]
          Length = 672

 Score =  625 bits (1611), Expect = e-176
 Identities = 309/450 (68%), Positives = 377/450 (83%), Gaps = 2/450 (0%)
 Frame = -3

Query: 1687 LLAGCIKDKHLYSKALQLLQELKDNGLHMDSVIYGTLLSICASNNRCEEAEAFFQQMKDE 1508
            LL+GCIK K  YSK L  +QELK NGL MD+VIYGT+L++CAS+NRCEEAE++F QMK+E
Sbjct: 222  LLSGCIKAKDGYSKTLDFVQELKYNGLQMDTVIYGTILAVCASHNRCEEAESYFSQMKNE 281

Query: 1507 GFSPNLFHYSALLNAYSMDANYAKADDLVKEMKSTGLVPNKVILTTLLKVYVRAGLFERS 1328
            G  PN+FHYS+LLNAY+   NY KA++LV++MKS GLVPNKVI TTLLKVYVR GLFE+S
Sbjct: 282  GHLPNVFHYSSLLNAYASSGNYKKAEELVQDMKSLGLVPNKVIWTTLLKVYVRGGLFEKS 341

Query: 1327 RELFVELEALGYAEDEMPYCLLMDGFAKAGHIHEAKSIFDEMETKDVKSDGYSHSIMISA 1148
            ++L +ELE LGYAEDEMPYCLLMDG +KAG + EA+S FDEM+ K+VKSDGY++SIMISA
Sbjct: 342  QQLLLELETLGYAEDEMPYCLLMDGLSKAGRVDEARSFFDEMKEKNVKSDGYAYSIMISA 401

Query: 1147 FCRSGLLEEAKQLARDFDAKYDKYDLVMLNTMLRAYCRAGEMESVMQMLRKMDELKISPD 968
            +CR  LLEEAKQLA++F+AKYDKYD+V+LNTML AYCRAG+MESVMQ +RKMDEL ISP 
Sbjct: 402  YCRGRLLEEAKQLAKEFEAKYDKYDVVILNTMLCAYCRAGDMESVMQTMRKMDELAISPS 461

Query: 967  WNTFHILIKYFFKERLYQLAYKTIVDMHSKGYQPDEELCASLILQLGKVGSSSEAFSIYN 788
            + TFHILIKYF K++LY LAY+T+ DMH KG+QP+EELC+ LI  LGK  + +EAFS+Y 
Sbjct: 462  YCTFHILIKYFCKQKLYLLAYQTMEDMHRKGHQPEEELCSMLIFHLGKAKAYTEAFSVYT 521

Query: 787  ILRYSKRTMCKALHGKMLNILVAGGLLKDAYVVVKDNAERISRTSLKKFAISFMKSGNIN 608
            +L+Y KRTMCKALH K+L++L+ G LLKDAYVVVKDNAE IS+ ++KKFA +FMK GNIN
Sbjct: 522  MLKYGKRTMCKALHEKILHVLLGGQLLKDAYVVVKDNAELISQAAIKKFANAFMKLGNIN 581

Query: 607  LINDVMKAVHSSDHKIDQ--EVFDMAISRYIGQPXXXXXXXXXXQWMTGQGYVVDSSSRN 434
            LINDVMK +HSS +KIDQ  E+F MAISRYI QP          QWM G GYVVD+S+RN
Sbjct: 582  LINDVMKVIHSSGYKIDQASELFQMAISRYIAQPEKKDLLVQLLQWMPGHGYVVDASTRN 641

Query: 433  LLLKNSDLFGRHLIADILSKQHKMSKVLRT 344
            L+LK+S LFGR LIA+ILSKQH +SK L++
Sbjct: 642  LILKSSHLFGRQLIAEILSKQHIISKTLKS 671



 Score = 74.7 bits (182), Expect = 1e-10
 Identities = 62/335 (18%), Positives = 145/335 (43%), Gaps = 4/335 (1%)
 Frame = -3

Query: 1579 LLSICASNNRCEEAEAFFQQMKDEGFSPNLFHYSALLNAYSMDANYAKADDLVKEMKSTG 1400
            +L      +R ++    F  M+      ++  Y++ +       N AKA ++   +    
Sbjct: 118  ILRNLGKQSRWQDLSKLFDWMQQHS-KISVSSYTSYMKFMGKSLNPAKALEIYNSIADES 176

Query: 1399 LVPNKVILTTLLKVYVRAGLFERSRELFVELEALGYAEDEMPYCLLMDGFAKAGHIHEAK 1220
            +  N  I  ++L   VR+G F+ S +LF +++  G   D + Y  L+ G  KA   +   
Sbjct: 177  VKNNVFICNSVLSCLVRSGKFDISLKLFHKMKQNGLTPDTITYSTLLSGCIKAKDGYSKT 236

Query: 1219 SIF-DEMETKDVKSDGYSHSIMISAFCRSGLLEEAKQLARDFDAKYDKYDLVMLNTMLRA 1043
              F  E++   ++ D   +  +++        EEA+        +    ++   +++L A
Sbjct: 237  LDFVQELKYNGLQMDTVIYGTILAVCASHNRCEEAESYFSQMKNEGHLPNVFHYSSLLNA 296

Query: 1042 YCRAGEMESVMQMLRKMDELKISPDWNTFHILIKYFFKERLYQLAYKTIVDMHSKGYQPD 863
            Y  +G  +   ++++ M  L + P+   +  L+K + +  L++ + + ++++ + GY  D
Sbjct: 297  YASSGNYKKAEELVQDMKSLGLVPNKVIWTTLLKVYVRGGLFEKSQQLLLELETLGYAED 356

Query: 862  EELCASLILQLGKVGSSSEAFSIYNILRYSKRTMCKALHGKMLNILVAGGLLKDAYVVVK 683
            E     L+  L K G   EA S ++ ++          +  M++    G LL++A  + K
Sbjct: 357  EMPYCLLMDGLSKAGRVDEARSFFDEMKEKNVKSDGYAYSIMISAYCRGRLLEEAKQLAK 416

Query: 682  D---NAERISRTSLKKFAISFMKSGNINLINDVMK 587
            +     ++     L     ++ ++G++  +   M+
Sbjct: 417  EFEAKYDKYDVVILNTMLCAYCRAGDMESVMQTMR 451


>ref|XP_006343482.1| PREDICTED: pentatricopeptide repeat-containing protein At1g10910,
            chloroplastic-like isoform X2 [Solanum tuberosum]
          Length = 651

 Score =  610 bits (1573), Expect = e-172
 Identities = 298/454 (65%), Positives = 372/454 (81%)
 Frame = -3

Query: 1687 LLAGCIKDKHLYSKALQLLQELKDNGLHMDSVIYGTLLSICASNNRCEEAEAFFQQMKDE 1508
            LLAGC K    Y KAL+L+QEL  NGL MDSV YG+LLS+CAS+  C EA  +FQ+MKDE
Sbjct: 198  LLAGCAKVNGGYYKALELVQELMSNGLQMDSVTYGSLLSVCASHKECNEAAKYFQKMKDE 257

Query: 1507 GFSPNLFHYSALLNAYSMDANYAKADDLVKEMKSTGLVPNKVILTTLLKVYVRAGLFERS 1328
            G SPN++HYS+LLNAYS D NY KA+ L++EM+S GLV NKVI TTLLKVYV+ GLFE+S
Sbjct: 258  GHSPNVYHYSSLLNAYSADRNYEKAEVLIEEMRSAGLVLNKVIYTTLLKVYVKGGLFEKS 317

Query: 1327 RELFVELEALGYAEDEMPYCLLMDGFAKAGHIHEAKSIFDEMETKDVKSDGYSHSIMISA 1148
            +EL  ELEALGYA+DEMP+CLLMDG AK+GH+ EAKS+FDEM  K VK+DGYS+SIMISA
Sbjct: 318  KELLKELEALGYAKDEMPFCLLMDGLAKSGHLLEAKSVFDEMMEKHVKTDGYSYSIMISA 377

Query: 1147 FCRSGLLEEAKQLARDFDAKYDKYDLVMLNTMLRAYCRAGEMESVMQMLRKMDELKISPD 968
            FCRSGLLE+AK++A +F+ KYDKYD+V+LN ML AYCRAG+ME+VM M++KMD+  ISPD
Sbjct: 378  FCRSGLLEDAKKVASEFEEKYDKYDIVILNAMLSAYCRAGKMENVMSMMKKMDDSAISPD 437

Query: 967  WNTFHILIKYFFKERLYQLAYKTIVDMHSKGYQPDEELCASLILQLGKVGSSSEAFSIYN 788
            WNTF+ILI+YF KE+LY LAY+T+ DMHSKG+QP+E LC+SLI  LGK G+ SEAFS+YN
Sbjct: 438  WNTFNILIRYFCKEKLYLLAYRTMEDMHSKGHQPEEGLCSSLIYHLGKTGAHSEAFSVYN 497

Query: 787  ILRYSKRTMCKALHGKMLNILVAGGLLKDAYVVVKDNAERISRTSLKKFAISFMKSGNIN 608
            +LRYSKRT+  ALH  +L+IL+AG LLKDAYVVVKDNA  IS+ ++KKF+++FM+SGN+N
Sbjct: 498  MLRYSKRTISNALHEHILHILIAGRLLKDAYVVVKDNAGFISQPAIKKFSVNFMRSGNVN 557

Query: 607  LINDVMKAVHSSDHKIDQEVFDMAISRYIGQPXXXXXXXXXXQWMTGQGYVVDSSSRNLL 428
            LINDVM A+HSS HKIDQE+FD+AI+RYI +P          +WM G+GY +DSS+RNL+
Sbjct: 558  LINDVMNAMHSSGHKIDQELFDLAIARYIAKPEKKELLLWLLKWMPGKGYAIDSSTRNLI 617

Query: 427  LKNSDLFGRHLIADILSKQHKMSKVLRTQAKKGK 326
            LKNS LFG  LIA+ LSK   MSK ++   +  +
Sbjct: 618  LKNSHLFGHQLIAESLSKHLVMSKKVKLHKENAR 651



 Score = 73.9 bits (180), Expect = 2e-10
 Identities = 73/356 (20%), Positives = 143/356 (40%), Gaps = 4/356 (1%)
 Frame = -3

Query: 1588 YGTLLSICASNNRCEEAEAFFQQMKDEGFSPNLFHYSALLNAYSMDANYAKADDLVKEMK 1409
            Y + +     +  C +A   ++ +KD     N+   +A L++   +     +  L  +MK
Sbjct: 125  YSSYVKFMGKSLSCVDAVEMYRDIKDRSIKYNVSVCNAFLSSLIKNGKSESSLKLFTQMK 184

Query: 1408 STGLVPNKVILTTLLKVYVRA-GLFERSRELFVELEALGYAEDEMPYCLLMDGFAKAGHI 1232
              GLVP+    +TLL    +  G + ++ EL  EL + G   D + Y  L+   A     
Sbjct: 185  RDGLVPDVFTYSTLLAGCAKVNGGYYKALELVQELMSNGLQMDSVTYGSLLSVCASHKEC 244

Query: 1231 HEAKSIFDEMETKDVKSDGYSHSIMISAFCRSGLLEEAKQLARDFDAKYDKYDLVMLNTM 1052
            +EA   F +M+ +    + Y +S +++A+      E+A+ L  +  +     + V+  T+
Sbjct: 245  NEAAKYFQKMKDEGHSPNVYHYSSLLNAYSADRNYEKAEVLIEEMRSAGLVLNKVIYTTL 304

Query: 1051 LRAYCRAGEMESVMQMLRKMDELKISPDWNTFHILIKYFFKERLYQLAYKTIVDMHSKGY 872
            L+ Y + G  E   ++L++++ L                                   GY
Sbjct: 305  LKVYVKGGLFEKSKELLKELEAL-----------------------------------GY 329

Query: 871  QPDEELCASLILQLGKVGSSSEAFSIYNILRYSKRTMCKALHGKMLNILVAGGLLKDAYV 692
              DE     L+  L K G   EA S+++ +           +  M++     GLL+DA  
Sbjct: 330  AKDEMPFCLLMDGLAKSGHLLEAKSVFDEMMEKHVKTDGYSYSIMISAFCRSGLLEDAKK 389

Query: 691  VVKDNAERISR---TSLKKFAISFMKSGNINLINDVMKAVHSSDHKIDQEVFDMAI 533
            V  +  E+  +     L     ++ ++G +  +  +MK +  S    D   F++ I
Sbjct: 390  VASEFEEKYDKYDIVILNAMLSAYCRAGKMENVMSMMKKMDDSAISPDWNTFNILI 445


>ref|XP_006417404.1| hypothetical protein EUTSA_v10007006mg [Eutrema salsugineum]
            gi|557095175|gb|ESQ35757.1| hypothetical protein
            EUTSA_v10007006mg [Eutrema salsugineum]
          Length = 666

 Score =  608 bits (1569), Expect = e-171
 Identities = 299/446 (67%), Positives = 371/446 (83%)
 Frame = -3

Query: 1687 LLAGCIKDKHLYSKALQLLQELKDNGLHMDSVIYGTLLSICASNNRCEEAEAFFQQMKDE 1508
            LLAGCIK K+ YSKA++L+ EL  NG+ MD V+YGT+L+ICASN RCEEAE+F QQMK +
Sbjct: 208  LLAGCIKVKNGYSKAMELVGELPHNGIQMDGVMYGTVLAICASNGRCEEAESFIQQMKVK 267

Query: 1507 GFSPNLFHYSALLNAYSMDANYAKADDLVKEMKSTGLVPNKVILTTLLKVYVRAGLFERS 1328
            G SPN++HYS+LLN+YS   +Y KAD+L+ EMKS G+VPNKV++TTLLKVY+R GLFERS
Sbjct: 268  GHSPNIYHYSSLLNSYSWKGDYKKADELMTEMKSVGIVPNKVMMTTLLKVYIRGGLFERS 327

Query: 1327 RELFVELEALGYAEDEMPYCLLMDGFAKAGHIHEAKSIFDEMETKDVKSDGYSHSIMISA 1148
            REL  ELE+ GYAE+EMPYC+LMDG +KAG   EA+SIFDEM+ K VKSDGY++SIMISA
Sbjct: 328  RELLSELESAGYAENEMPYCMLMDGLSKAGKFEEARSIFDEMKGKGVKSDGYANSIMISA 387

Query: 1147 FCRSGLLEEAKQLARDFDAKYDKYDLVMLNTMLRAYCRAGEMESVMQMLRKMDELKISPD 968
             CRS   EEAKQLARD ++ Y+K DLVMLNTML AYCRAGEMESVM+M++KMDE  +SPD
Sbjct: 388  LCRSKRFEEAKQLARDSESTYEKCDLVMLNTMLCAYCRAGEMESVMRMMKKMDEQAVSPD 447

Query: 967  WNTFHILIKYFFKERLYQLAYKTIVDMHSKGYQPDEELCASLILQLGKVGSSSEAFSIYN 788
            +NTFHILIKYF KE+L+ LAY+T++DMHSKG++ +EELC+SLI  LGK+ + SEAFS+Y+
Sbjct: 448  YNTFHILIKYFIKEKLHLLAYQTLLDMHSKGHRLEEELCSSLIYHLGKIRAHSEAFSVYS 507

Query: 787  ILRYSKRTMCKALHGKMLNILVAGGLLKDAYVVVKDNAERISRTSLKKFAISFMKSGNIN 608
            +LRYSKRT+CK LH K+L+IL+ G LLKDAYVVVKDNA+ IS+ +LK+F  +FM SGN+N
Sbjct: 508  MLRYSKRTICKDLHEKILHILIHGKLLKDAYVVVKDNAKMISQPTLKRFGRAFMNSGNVN 567

Query: 607  LINDVMKAVHSSDHKIDQEVFDMAISRYIGQPXXXXXXXXXXQWMTGQGYVVDSSSRNLL 428
            L+NDV+K +H S HKIDQ  F++AISRYI QP          QWM GQGYVVDSS+RNL+
Sbjct: 568  LVNDVLKVLHGSGHKIDQVQFEIAISRYISQPDKKELLLQLLQWMPGQGYVVDSSTRNLI 627

Query: 427  LKNSDLFGRHLIADILSKQHKMSKVL 350
            LKNS+LFGR LIA+ILSK H  S+ +
Sbjct: 628  LKNSNLFGRQLIAEILSKHHIASRTM 653



 Score = 71.6 bits (174), Expect = 1e-09
 Identities = 70/337 (20%), Positives = 143/337 (42%), Gaps = 5/337 (1%)
 Frame = -3

Query: 1543 EAEAFFQQMKDEGFSPNLFHYSALLNAYSMDANYAKADDLVKEMKSTGLVPNKVILTTLL 1364
            +A   +Q + DE    N++  +++L+    +        L  +MK  GL P+ +   TLL
Sbjct: 150  KALEIYQSIPDESTKINVYICNSILSCLVKNGKLESCFKLFDQMKRDGLKPDVITYNTLL 209

Query: 1363 K--VYVRAGLFERSRELFVELEALGYAEDEMPYCLLMDGFAKAGHIHEAKSIFDEMETKD 1190
               + V+ G + ++ EL  EL   G   D + Y  ++   A  G   EA+S   +M+ K 
Sbjct: 210  AGCIKVKNG-YSKAMELVGELPHNGIQMDGVMYGTVLAICASNGRCEEAESFIQQMKVKG 268

Query: 1189 VKSDGYSHSIMISAFCRSGLLEEAKQLARDFDAKYDKYDLVMLNTMLRAYCRAGEMESVM 1010
               + Y +S +++++   G  ++A +L  +  +     + VM+ T+L+ Y R G  E   
Sbjct: 269  HSPNIYHYSSLLNSYSWKGDYKKADELMTEMKSVGIVPNKVMMTTLLKVYIRGGLFERSR 328

Query: 1009 QMLRKMDELKISPDWNTFHILIKYFFKERLYQLAYKTIVDMHSKGYQPDEELCASLILQL 830
            ++L +++    + +   + +L+    K   ++ A     +M  KG + D    + +I  L
Sbjct: 329  ELLSELESAGYAENEMPYCMLMDGLSKAGKFEEARSIFDEMKGKGVKSDGYANSIMISAL 388

Query: 829  GKVGSSSEAFSIYNILRYSKRTMCKALHGKMLNILVAGGLLKDAYVVVKDNAERISRTSL 650
             +     EA  +      +       +   ML      G ++    ++K   E+      
Sbjct: 389  CRSKRFEEAKQLARDSESTYEKCDLVMLNTMLCAYCRAGEMESVMRMMKKMDEQAVSPDY 448

Query: 649  KKFAI---SFMKSGNINLINDVMKAVHSSDHKIDQEV 548
              F I    F+K     L    +  +HS  H++++E+
Sbjct: 449  NTFHILIKYFIKEKLHLLAYQTLLDMHSKGHRLEEEL 485


>ref|XP_006343484.1| PREDICTED: pentatricopeptide repeat-containing protein At1g10910,
            chloroplastic-like isoform X4 [Solanum tuberosum]
          Length = 539

 Score =  605 bits (1561), Expect = e-170
 Identities = 298/455 (65%), Positives = 372/455 (81%), Gaps = 1/455 (0%)
 Frame = -3

Query: 1687 LLAGCIKDKHLYSKALQLLQELKDNGLHMDSVIYGTLLSICASNNRCEEAEAFFQQMKDE 1508
            LLAGC K    Y KAL+L+QEL  NGL MDSV YG+LLS+CAS+  C EA  +FQ+MKDE
Sbjct: 85   LLAGCAKVNGGYYKALELVQELMSNGLQMDSVTYGSLLSVCASHKECNEAAKYFQKMKDE 144

Query: 1507 GFSPNLFHYSALLNAYSMDANYAKADDLVKEMKSTGLVPNKVILTTLLKVYVRAGLFERS 1328
            G SPN++HYS+LLNAYS D NY KA+ L++EM+S GLV NKVI TTLLKVYV+ GLFE+S
Sbjct: 145  GHSPNVYHYSSLLNAYSADRNYEKAEVLIEEMRSAGLVLNKVIYTTLLKVYVKGGLFEKS 204

Query: 1327 RELFVELEALGYAEDEMPYCLLMDGFAKAGHIHEAKSIFDEMETKDVKS-DGYSHSIMIS 1151
            +EL  ELEALGYA+DEMP+CLLMDG AK+GH+ EAKS+FDEM  K VK+ DGYS+SIMIS
Sbjct: 205  KELLKELEALGYAKDEMPFCLLMDGLAKSGHLLEAKSVFDEMMEKHVKTADGYSYSIMIS 264

Query: 1150 AFCRSGLLEEAKQLARDFDAKYDKYDLVMLNTMLRAYCRAGEMESVMQMLRKMDELKISP 971
            AFCRSGLLE+AK++A +F+ KYDKYD+V+LN ML AYCRAG+ME+VM M++KMD+  ISP
Sbjct: 265  AFCRSGLLEDAKKVASEFEEKYDKYDIVILNAMLSAYCRAGKMENVMSMMKKMDDSAISP 324

Query: 970  DWNTFHILIKYFFKERLYQLAYKTIVDMHSKGYQPDEELCASLILQLGKVGSSSEAFSIY 791
            DWNTF+ILI+YF KE+LY LAY+T+ DMHSKG+QP+E LC+SLI  LGK G+ SEAFS+Y
Sbjct: 325  DWNTFNILIRYFCKEKLYLLAYRTMEDMHSKGHQPEEGLCSSLIYHLGKTGAHSEAFSVY 384

Query: 790  NILRYSKRTMCKALHGKMLNILVAGGLLKDAYVVVKDNAERISRTSLKKFAISFMKSGNI 611
            N+LRYSKRT+  ALH  +L+IL+AG LLKDAYVVVKDNA  IS+ ++KKF+++FM+SGN+
Sbjct: 385  NMLRYSKRTISNALHEHILHILIAGRLLKDAYVVVKDNAGFISQPAIKKFSVNFMRSGNV 444

Query: 610  NLINDVMKAVHSSDHKIDQEVFDMAISRYIGQPXXXXXXXXXXQWMTGQGYVVDSSSRNL 431
            NLINDVM A+HSS HKIDQE+FD+AI+RYI +P          +WM G+GY +DSS+RNL
Sbjct: 445  NLINDVMNAMHSSGHKIDQELFDLAIARYIAKPEKKELLLWLLKWMPGKGYAIDSSTRNL 504

Query: 430  LLKNSDLFGRHLIADILSKQHKMSKVLRTQAKKGK 326
            +LKNS LFG  LIA+ LSK   MSK ++   +  +
Sbjct: 505  ILKNSHLFGHQLIAESLSKHLVMSKKVKLHKENAR 539



 Score = 74.7 bits (182), Expect = 1e-10
 Identities = 74/357 (20%), Positives = 146/357 (40%), Gaps = 5/357 (1%)
 Frame = -3

Query: 1588 YGTLLSICASNNRCEEAEAFFQQMKDEGFSPNLFHYSALLNAYSMDANYAKADDLVKEMK 1409
            Y + +     +  C +A   ++ +KD     N+   +A L++   +     +  L  +MK
Sbjct: 12   YSSYVKFMGKSLSCVDAVEMYRDIKDRSIKYNVSVCNAFLSSLIKNGKSESSLKLFTQMK 71

Query: 1408 STGLVPNKVILTTLLKVYVRA-GLFERSRELFVELEALGYAEDEMPYCLLMDGFAKAGHI 1232
              GLVP+    +TLL    +  G + ++ EL  EL + G   D + Y  L+   A     
Sbjct: 72   RDGLVPDVFTYSTLLAGCAKVNGGYYKALELVQELMSNGLQMDSVTYGSLLSVCASHKEC 131

Query: 1231 HEAKSIFDEMETKDVKSDGYSHSIMISAFCRSGLLEEAKQLARDFDAKYDKYDLVMLNTM 1052
            +EA   F +M+ +    + Y +S +++A+      E+A+ L  +  +     + V+  T+
Sbjct: 132  NEAAKYFQKMKDEGHSPNVYHYSSLLNAYSADRNYEKAEVLIEEMRSAGLVLNKVIYTTL 191

Query: 1051 LRAYCRAGEMESVMQMLRKMDELKISPDWNTFHILIKYFFKERLYQLAYKTIVDMHSKGY 872
            L+ Y + G  E   ++L++++ L                                   GY
Sbjct: 192  LKVYVKGGLFEKSKELLKELEAL-----------------------------------GY 216

Query: 871  QPDEELCASLILQLGKVGSSSEAFSIYN-ILRYSKRTMCKALHGKMLNILVAGGLLKDAY 695
              DE     L+  L K G   EA S+++ ++    +T     +  M++     GLL+DA 
Sbjct: 217  AKDEMPFCLLMDGLAKSGHLLEAKSVFDEMMEKHVKTADGYSYSIMISAFCRSGLLEDAK 276

Query: 694  VVVKDNAERISR---TSLKKFAISFMKSGNINLINDVMKAVHSSDHKIDQEVFDMAI 533
             V  +  E+  +     L     ++ ++G +  +  +MK +  S    D   F++ I
Sbjct: 277  KVASEFEEKYDKYDIVILNAMLSAYCRAGKMENVMSMMKKMDDSAISPDWNTFNILI 333


>ref|XP_006343481.1| PREDICTED: pentatricopeptide repeat-containing protein At1g10910,
            chloroplastic-like isoform X1 [Solanum tuberosum]
          Length = 652

 Score =  605 bits (1561), Expect = e-170
 Identities = 298/455 (65%), Positives = 372/455 (81%), Gaps = 1/455 (0%)
 Frame = -3

Query: 1687 LLAGCIKDKHLYSKALQLLQELKDNGLHMDSVIYGTLLSICASNNRCEEAEAFFQQMKDE 1508
            LLAGC K    Y KAL+L+QEL  NGL MDSV YG+LLS+CAS+  C EA  +FQ+MKDE
Sbjct: 198  LLAGCAKVNGGYYKALELVQELMSNGLQMDSVTYGSLLSVCASHKECNEAAKYFQKMKDE 257

Query: 1507 GFSPNLFHYSALLNAYSMDANYAKADDLVKEMKSTGLVPNKVILTTLLKVYVRAGLFERS 1328
            G SPN++HYS+LLNAYS D NY KA+ L++EM+S GLV NKVI TTLLKVYV+ GLFE+S
Sbjct: 258  GHSPNVYHYSSLLNAYSADRNYEKAEVLIEEMRSAGLVLNKVIYTTLLKVYVKGGLFEKS 317

Query: 1327 RELFVELEALGYAEDEMPYCLLMDGFAKAGHIHEAKSIFDEMETKDVKS-DGYSHSIMIS 1151
            +EL  ELEALGYA+DEMP+CLLMDG AK+GH+ EAKS+FDEM  K VK+ DGYS+SIMIS
Sbjct: 318  KELLKELEALGYAKDEMPFCLLMDGLAKSGHLLEAKSVFDEMMEKHVKTADGYSYSIMIS 377

Query: 1150 AFCRSGLLEEAKQLARDFDAKYDKYDLVMLNTMLRAYCRAGEMESVMQMLRKMDELKISP 971
            AFCRSGLLE+AK++A +F+ KYDKYD+V+LN ML AYCRAG+ME+VM M++KMD+  ISP
Sbjct: 378  AFCRSGLLEDAKKVASEFEEKYDKYDIVILNAMLSAYCRAGKMENVMSMMKKMDDSAISP 437

Query: 970  DWNTFHILIKYFFKERLYQLAYKTIVDMHSKGYQPDEELCASLILQLGKVGSSSEAFSIY 791
            DWNTF+ILI+YF KE+LY LAY+T+ DMHSKG+QP+E LC+SLI  LGK G+ SEAFS+Y
Sbjct: 438  DWNTFNILIRYFCKEKLYLLAYRTMEDMHSKGHQPEEGLCSSLIYHLGKTGAHSEAFSVY 497

Query: 790  NILRYSKRTMCKALHGKMLNILVAGGLLKDAYVVVKDNAERISRTSLKKFAISFMKSGNI 611
            N+LRYSKRT+  ALH  +L+IL+AG LLKDAYVVVKDNA  IS+ ++KKF+++FM+SGN+
Sbjct: 498  NMLRYSKRTISNALHEHILHILIAGRLLKDAYVVVKDNAGFISQPAIKKFSVNFMRSGNV 557

Query: 610  NLINDVMKAVHSSDHKIDQEVFDMAISRYIGQPXXXXXXXXXXQWMTGQGYVVDSSSRNL 431
            NLINDVM A+HSS HKIDQE+FD+AI+RYI +P          +WM G+GY +DSS+RNL
Sbjct: 558  NLINDVMNAMHSSGHKIDQELFDLAIARYIAKPEKKELLLWLLKWMPGKGYAIDSSTRNL 617

Query: 430  LLKNSDLFGRHLIADILSKQHKMSKVLRTQAKKGK 326
            +LKNS LFG  LIA+ LSK   MSK ++   +  +
Sbjct: 618  ILKNSHLFGHQLIAESLSKHLVMSKKVKLHKENAR 652



 Score = 74.7 bits (182), Expect = 1e-10
 Identities = 74/357 (20%), Positives = 146/357 (40%), Gaps = 5/357 (1%)
 Frame = -3

Query: 1588 YGTLLSICASNNRCEEAEAFFQQMKDEGFSPNLFHYSALLNAYSMDANYAKADDLVKEMK 1409
            Y + +     +  C +A   ++ +KD     N+   +A L++   +     +  L  +MK
Sbjct: 125  YSSYVKFMGKSLSCVDAVEMYRDIKDRSIKYNVSVCNAFLSSLIKNGKSESSLKLFTQMK 184

Query: 1408 STGLVPNKVILTTLLKVYVRA-GLFERSRELFVELEALGYAEDEMPYCLLMDGFAKAGHI 1232
              GLVP+    +TLL    +  G + ++ EL  EL + G   D + Y  L+   A     
Sbjct: 185  RDGLVPDVFTYSTLLAGCAKVNGGYYKALELVQELMSNGLQMDSVTYGSLLSVCASHKEC 244

Query: 1231 HEAKSIFDEMETKDVKSDGYSHSIMISAFCRSGLLEEAKQLARDFDAKYDKYDLVMLNTM 1052
            +EA   F +M+ +    + Y +S +++A+      E+A+ L  +  +     + V+  T+
Sbjct: 245  NEAAKYFQKMKDEGHSPNVYHYSSLLNAYSADRNYEKAEVLIEEMRSAGLVLNKVIYTTL 304

Query: 1051 LRAYCRAGEMESVMQMLRKMDELKISPDWNTFHILIKYFFKERLYQLAYKTIVDMHSKGY 872
            L+ Y + G  E   ++L++++ L                                   GY
Sbjct: 305  LKVYVKGGLFEKSKELLKELEAL-----------------------------------GY 329

Query: 871  QPDEELCASLILQLGKVGSSSEAFSIYN-ILRYSKRTMCKALHGKMLNILVAGGLLKDAY 695
              DE     L+  L K G   EA S+++ ++    +T     +  M++     GLL+DA 
Sbjct: 330  AKDEMPFCLLMDGLAKSGHLLEAKSVFDEMMEKHVKTADGYSYSIMISAFCRSGLLEDAK 389

Query: 694  VVVKDNAERISR---TSLKKFAISFMKSGNINLINDVMKAVHSSDHKIDQEVFDMAI 533
             V  +  E+  +     L     ++ ++G +  +  +MK +  S    D   F++ I
Sbjct: 390  KVASEFEEKYDKYDIVILNAMLSAYCRAGKMENVMSMMKKMDDSAISPDWNTFNILI 446


>ref|XP_004250704.1| PREDICTED: pentatricopeptide repeat-containing protein At1g10910,
            chloroplastic-like [Solanum lycopersicum]
          Length = 642

 Score =  605 bits (1561), Expect = e-170
 Identities = 296/444 (66%), Positives = 366/444 (82%)
 Frame = -3

Query: 1687 LLAGCIKDKHLYSKALQLLQELKDNGLHMDSVIYGTLLSICASNNRCEEAEAFFQQMKDE 1508
            LLAGC K    Y KAL+L+QE+  NGL MDSV YG+LLS+CAS+  C EA  +FQ+MKDE
Sbjct: 198  LLAGCAKVNGGYYKALELVQEMMSNGLEMDSVTYGSLLSVCASHKECNEAAKYFQKMKDE 257

Query: 1507 GFSPNLFHYSALLNAYSMDANYAKADDLVKEMKSTGLVPNKVILTTLLKVYVRAGLFERS 1328
            G SPN++HYS+LLNAYS D NY KA+ L++EM+S GLV NKVI TTLLKVYV+ GLFE+S
Sbjct: 258  GHSPNVYHYSSLLNAYSADRNYEKAEALIEEMRSAGLVLNKVIYTTLLKVYVKGGLFEKS 317

Query: 1327 RELFVELEALGYAEDEMPYCLLMDGFAKAGHIHEAKSIFDEMETKDVKSDGYSHSIMISA 1148
            +EL  ELEALGYA+DEMP+CLLMDG AK+GH+ EAKS+FDEM  K VK+DGYS+SIMISA
Sbjct: 318  KELLKELEALGYAKDEMPFCLLMDGLAKSGHLLEAKSVFDEMMEKQVKTDGYSYSIMISA 377

Query: 1147 FCRSGLLEEAKQLARDFDAKYDKYDLVMLNTMLRAYCRAGEMESVMQMLRKMDELKISPD 968
            FCR GLLE+AK+LA +F+ KYDKYD+V+LN ML AYCRAG+ME+VM M++KMD+  ISPD
Sbjct: 378  FCRRGLLEDAKKLASEFEEKYDKYDIVILNAMLSAYCRAGKMENVMSMMKKMDDSAISPD 437

Query: 967  WNTFHILIKYFFKERLYQLAYKTIVDMHSKGYQPDEELCASLILQLGKVGSSSEAFSIYN 788
            WNTF+ILI+YF KE+LY LAY+T+ DMHSKG+QP+E LC+SLI  LGK G+ SEAFS+YN
Sbjct: 438  WNTFNILIRYFCKEKLYLLAYRTMEDMHSKGHQPEEGLCSSLIYHLGKTGAHSEAFSVYN 497

Query: 787  ILRYSKRTMCKALHGKMLNILVAGGLLKDAYVVVKDNAERISRTSLKKFAISFMKSGNIN 608
            +LRYSKRT+  ALH  +L+IL+AG LLKDAYVVVKDNA  IS+ ++KKF+++FM+SGN+N
Sbjct: 498  MLRYSKRTISNALHENILHILIAGRLLKDAYVVVKDNAGFISQPAIKKFSVNFMRSGNVN 557

Query: 607  LINDVMKAVHSSDHKIDQEVFDMAISRYIGQPXXXXXXXXXXQWMTGQGYVVDSSSRNLL 428
            LINDVM A+HSS HKIDQE+FD+AI+RYI +P          +WM  +GY +DSS+RNL+
Sbjct: 558  LINDVMNAMHSSGHKIDQELFDLAIARYIAKPEKKELLLWLLKWMPVKGYAIDSSTRNLI 617

Query: 427  LKNSDLFGRHLIADILSKQHKMSK 356
            LKNS LFG  LIA+ LSK   MSK
Sbjct: 618  LKNSHLFGHQLIAESLSKHLVMSK 641



 Score = 72.0 bits (175), Expect = 9e-10
 Identities = 71/356 (19%), Positives = 144/356 (40%), Gaps = 4/356 (1%)
 Frame = -3

Query: 1588 YGTLLSICASNNRCEEAEAFFQQMKDEGFSPNLFHYSALLNAYSMDANYAKADDLVKEMK 1409
            Y + +     +  C +A   ++ +KD     N+   +A L++   +     +  L  +MK
Sbjct: 125  YSSYVKFMGKSLSCVDAVEMYRDIKDRSIKFNVSVCNAFLSSLIKNGKSESSLKLFTQMK 184

Query: 1408 STGLVPNKVILTTLLKVYVRA-GLFERSRELFVELEALGYAEDEMPYCLLMDGFAKAGHI 1232
              GLVP+    +TLL    +  G + ++ EL  E+ + G   D + Y  L+   A     
Sbjct: 185  RDGLVPDVFTYSTLLAGCAKVNGGYYKALELVQEMMSNGLEMDSVTYGSLLSVCASHKEC 244

Query: 1231 HEAKSIFDEMETKDVKSDGYSHSIMISAFCRSGLLEEAKQLARDFDAKYDKYDLVMLNTM 1052
            +EA   F +M+ +    + Y +S +++A+      E+A+ L  +  +     + V+  T+
Sbjct: 245  NEAAKYFQKMKDEGHSPNVYHYSSLLNAYSADRNYEKAEALIEEMRSAGLVLNKVIYTTL 304

Query: 1051 LRAYCRAGEMESVMQMLRKMDELKISPDWNTFHILIKYFFKERLYQLAYKTIVDMHSKGY 872
            L+ Y + G  E   ++L++++ L                                   GY
Sbjct: 305  LKVYVKGGLFEKSKELLKELEAL-----------------------------------GY 329

Query: 871  QPDEELCASLILQLGKVGSSSEAFSIYNILRYSKRTMCKALHGKMLNILVAGGLLKDAYV 692
              DE     L+  L K G   EA S+++ +   +       +  M++     GLL+DA  
Sbjct: 330  AKDEMPFCLLMDGLAKSGHLLEAKSVFDEMMEKQVKTDGYSYSIMISAFCRRGLLEDAKK 389

Query: 691  VVKDNAERISR---TSLKKFAISFMKSGNINLINDVMKAVHSSDHKIDQEVFDMAI 533
            +  +  E+  +     L     ++ ++G +  +  +MK +  S    D   F++ I
Sbjct: 390  LASEFEEKYDKYDIVILNAMLSAYCRAGKMENVMSMMKKMDDSAISPDWNTFNILI 445


>ref|XP_006343483.1| PREDICTED: pentatricopeptide repeat-containing protein At1g10910,
            chloroplastic-like isoform X3 [Solanum tuberosum]
          Length = 646

 Score =  605 bits (1559), Expect = e-170
 Identities = 298/445 (66%), Positives = 368/445 (82%), Gaps = 1/445 (0%)
 Frame = -3

Query: 1687 LLAGCIKDKHLYSKALQLLQELKDNGLHMDSVIYGTLLSICASNNRCEEAEAFFQQMKDE 1508
            LLAGC K    Y KAL+L+QEL  NGL MDSV YG+LLS+CAS+  C EA  +FQ+MKDE
Sbjct: 198  LLAGCAKVNGGYYKALELVQELMSNGLQMDSVTYGSLLSVCASHKECNEAAKYFQKMKDE 257

Query: 1507 GFSPNLFHYSALLNAYSMDANYAKADDLVKEMKSTGLVPNKVILTTLLKVYVRAGLFERS 1328
            G SPN++HYS+LLNAYS D NY KA+ L++EM+S GLV NKVI TTLLKVYV+ GLFE+S
Sbjct: 258  GHSPNVYHYSSLLNAYSADRNYEKAEVLIEEMRSAGLVLNKVIYTTLLKVYVKGGLFEKS 317

Query: 1327 RELFVELEALGYAEDEMPYCLLMDGFAKAGHIHEAKSIFDEMETKDVKS-DGYSHSIMIS 1151
            +EL  ELEALGYA+DEMP+CLLMDG AK+GH+ EAKS+FDEM  K VK+ DGYS+SIMIS
Sbjct: 318  KELLKELEALGYAKDEMPFCLLMDGLAKSGHLLEAKSVFDEMMEKHVKTADGYSYSIMIS 377

Query: 1150 AFCRSGLLEEAKQLARDFDAKYDKYDLVMLNTMLRAYCRAGEMESVMQMLRKMDELKISP 971
            AFCRSGLLE+AK++A +F+ KYDKYD+V+LN ML AYCRAG+ME+VM M++KMD+  ISP
Sbjct: 378  AFCRSGLLEDAKKVASEFEEKYDKYDIVILNAMLSAYCRAGKMENVMSMMKKMDDSAISP 437

Query: 970  DWNTFHILIKYFFKERLYQLAYKTIVDMHSKGYQPDEELCASLILQLGKVGSSSEAFSIY 791
            DWNTF+ILI+YF KE+LY LAY+T+ DMHSKG+QP+E LC+SLI  LGK G+ SEAFS+Y
Sbjct: 438  DWNTFNILIRYFCKEKLYLLAYRTMEDMHSKGHQPEEGLCSSLIYHLGKTGAHSEAFSVY 497

Query: 790  NILRYSKRTMCKALHGKMLNILVAGGLLKDAYVVVKDNAERISRTSLKKFAISFMKSGNI 611
            N+LRYSKRT+  ALH  +L+IL+AG LLKDAYVVVKDNA  IS+ ++KKF+++FM+SGN+
Sbjct: 498  NMLRYSKRTISNALHEHILHILIAGRLLKDAYVVVKDNAGFISQPAIKKFSVNFMRSGNV 557

Query: 610  NLINDVMKAVHSSDHKIDQEVFDMAISRYIGQPXXXXXXXXXXQWMTGQGYVVDSSSRNL 431
            NLINDVM A+HSS HKIDQE+FD+AI+RYI +P          +WM G+GY +DSS+RNL
Sbjct: 558  NLINDVMNAMHSSGHKIDQELFDLAIARYIAKPEKKELLLWLLKWMPGKGYAIDSSTRNL 617

Query: 430  LLKNSDLFGRHLIADILSKQHKMSK 356
            +LKNS LFG  LIA+ LSK   MSK
Sbjct: 618  ILKNSHLFGHQLIAESLSKHLVMSK 642



 Score = 74.7 bits (182), Expect = 1e-10
 Identities = 74/357 (20%), Positives = 146/357 (40%), Gaps = 5/357 (1%)
 Frame = -3

Query: 1588 YGTLLSICASNNRCEEAEAFFQQMKDEGFSPNLFHYSALLNAYSMDANYAKADDLVKEMK 1409
            Y + +     +  C +A   ++ +KD     N+   +A L++   +     +  L  +MK
Sbjct: 125  YSSYVKFMGKSLSCVDAVEMYRDIKDRSIKYNVSVCNAFLSSLIKNGKSESSLKLFTQMK 184

Query: 1408 STGLVPNKVILTTLLKVYVRA-GLFERSRELFVELEALGYAEDEMPYCLLMDGFAKAGHI 1232
              GLVP+    +TLL    +  G + ++ EL  EL + G   D + Y  L+   A     
Sbjct: 185  RDGLVPDVFTYSTLLAGCAKVNGGYYKALELVQELMSNGLQMDSVTYGSLLSVCASHKEC 244

Query: 1231 HEAKSIFDEMETKDVKSDGYSHSIMISAFCRSGLLEEAKQLARDFDAKYDKYDLVMLNTM 1052
            +EA   F +M+ +    + Y +S +++A+      E+A+ L  +  +     + V+  T+
Sbjct: 245  NEAAKYFQKMKDEGHSPNVYHYSSLLNAYSADRNYEKAEVLIEEMRSAGLVLNKVIYTTL 304

Query: 1051 LRAYCRAGEMESVMQMLRKMDELKISPDWNTFHILIKYFFKERLYQLAYKTIVDMHSKGY 872
            L+ Y + G  E   ++L++++ L                                   GY
Sbjct: 305  LKVYVKGGLFEKSKELLKELEAL-----------------------------------GY 329

Query: 871  QPDEELCASLILQLGKVGSSSEAFSIYN-ILRYSKRTMCKALHGKMLNILVAGGLLKDAY 695
              DE     L+  L K G   EA S+++ ++    +T     +  M++     GLL+DA 
Sbjct: 330  AKDEMPFCLLMDGLAKSGHLLEAKSVFDEMMEKHVKTADGYSYSIMISAFCRSGLLEDAK 389

Query: 694  VVVKDNAERISR---TSLKKFAISFMKSGNINLINDVMKAVHSSDHKIDQEVFDMAI 533
             V  +  E+  +     L     ++ ++G +  +  +MK +  S    D   F++ I
Sbjct: 390  KVASEFEEKYDKYDIVILNAMLSAYCRAGKMENVMSMMKKMDDSAISPDWNTFNILI 446


>ref|XP_007148512.1| hypothetical protein PHAVU_006G214900g [Phaseolus vulgaris]
            gi|561021735|gb|ESW20506.1| hypothetical protein
            PHAVU_006G214900g [Phaseolus vulgaris]
          Length = 639

 Score =  602 bits (1552), Expect = e-169
 Identities = 298/444 (67%), Positives = 365/444 (82%)
 Frame = -3

Query: 1687 LLAGCIKDKHLYSKALQLLQELKDNGLHMDSVIYGTLLSICASNNRCEEAEAFFQQMKDE 1508
            LLAGCIK ++ Y KAL+L+QEL+ + L MD VIYGT+L++CASN + EEAE +F QMKDE
Sbjct: 190  LLAGCIKIENGYPKALELIQELQHSKLQMDGVIYGTILAVCASNGKWEEAEKYFNQMKDE 249

Query: 1507 GFSPNLFHYSALLNAYSMDANYAKADDLVKEMKSTGLVPNKVILTTLLKVYVRAGLFERS 1328
            G S N++HYS+LLNAYS   NY KAD L ++MKS GLVPNKVILTTLLKVYV+ GLF++S
Sbjct: 250  GHSRNVYHYSSLLNAYSTCGNYKKADILFQDMKSEGLVPNKVILTTLLKVYVKGGLFDKS 309

Query: 1327 RELFVELEALGYAEDEMPYCLLMDGFAKAGHIHEAKSIFDEMETKDVKSDGYSHSIMISA 1148
            REL  EL++LGYAEDEMPYC+LMDG AKAG IHEAK IFDEM    V+SDGY+HSIMISA
Sbjct: 310  RELLAELKSLGYAEDEMPYCILMDGLAKAGQIHEAKLIFDEMMKNHVRSDGYAHSIMISA 369

Query: 1147 FCRSGLLEEAKQLARDFDAKYDKYDLVMLNTMLRAYCRAGEMESVMQMLRKMDELKISPD 968
             CRS L  EAKQLA+DF+   +KYD+V+LN+ML A+CR GEMESVM+ L+KMDEL ISP 
Sbjct: 370  LCRSKLFREAKQLAKDFETTSNKYDIVILNSMLCAFCRVGEMESVMETLKKMDELAISPS 429

Query: 967  WNTFHILIKYFFKERLYQLAYKTIVDMHSKGYQPDEELCASLILQLGKVGSSSEAFSIYN 788
            +NTFHILIKYF +E++Y LAY+T+ DMHSKG+QP EELC++LI  LG+V + SEAFS+YN
Sbjct: 430  YNTFHILIKYFCREKMYLLAYRTMKDMHSKGHQPGEELCSTLISHLGQVNAYSEAFSVYN 489

Query: 787  ILRYSKRTMCKALHGKMLNILVAGGLLKDAYVVVKDNAERISRTSLKKFAISFMKSGNIN 608
            +LRY KRTMCK+LH K+L IL+AG LLKDAYVVVKDNA+ ISR   KKFAI+FMKSGNIN
Sbjct: 490  MLRYGKRTMCKSLHEKILYILLAGHLLKDAYVVVKDNAKYISRPPTKKFAIAFMKSGNIN 549

Query: 607  LINDVMKAVHSSDHKIDQEVFDMAISRYIGQPXXXXXXXXXXQWMTGQGYVVDSSSRNLL 428
             INDV+K +H S +K+DQ++F MA+SRY+G+P          QWM+GQGY+VDSS+RNL+
Sbjct: 550  YINDVLKTLHDSGYKLDQDLFAMAVSRYLGEPEKKDLLLHLLQWMSGQGYMVDSSTRNLI 609

Query: 427  LKNSDLFGRHLIADILSKQHKMSK 356
            LK+S LFGR LIA++LSKQ    K
Sbjct: 610  LKHSHLFGRQLIAEVLSKQQVQLK 633



 Score = 73.2 bits (178), Expect = 4e-10
 Identities = 81/389 (20%), Positives = 161/389 (41%), Gaps = 4/389 (1%)
 Frame = -3

Query: 1669 KDKHLYSKALQLLQELKDNGLHMDSVIYGTLLSICASNNRCEEAEAFFQQMKDEGFSPNL 1490
            K+ + ++   QL + +++N   +D   Y   +   A+N    E    +  ++DE    N+
Sbjct: 91   KNSNKFNHISQLFKWMQENN-KLDVSSYSHYMRFMANNLDAAEMLQLYHSIQDESARKNI 149

Query: 1489 FHYSALLNAYSMDANYAKADDLVKEMKSTGLVPNKVILTTLLKVYVR-AGLFERSRELFV 1313
               +++L        +     L ++M+  GLVP+ V  +TLL   ++    + ++ EL  
Sbjct: 150  LVCNSVLGCLIKKGKFDSGMKLFRQMQLDGLVPDPVTYSTLLAGCIKIENGYPKALELIQ 209

Query: 1312 ELEALGYAEDEMPYCLLMDGFAKAGHIHEAKSIFDEMETKDVKSDGYSHSIMISAFCRSG 1133
            EL+      D + Y  ++   A  G   EA+  F++M+ +    + Y +S +++A+   G
Sbjct: 210  ELQHSKLQMDGVIYGTILAVCASNGKWEEAEKYFNQMKDEGHSRNVYHYSSLLNAYSTCG 269

Query: 1132 LLEEAKQLARDFDAKYDKYDLVMLNTMLRAYCRAGEMESVMQMLRKMDELKISPDWNTFH 953
              ++A  L +D  ++    + V+L T+L+ Y + G  +   ++L ++  L  + D   + 
Sbjct: 270  NYKKADILFQDMKSEGLVPNKVILTTLLKVYVKGGLFDKSRELLAELKSLGYAEDEMPYC 329

Query: 952  ILIKYFFKERLYQLAYKTIVDMHSKGYQPDEELCASLILQLGKVGSSSEAFSIYNILRYS 773
            IL+    K      A     +M     + D    + +I  L +     EA  +      +
Sbjct: 330  ILMDGLAKAGQIHEAKLIFDEMMKNHVRSDGYAHSIMISALCRSKLFREAKQLAKDFETT 389

Query: 772  KRTMCKALHGKMLNILVAGGLLKDAYVVVKDNAERISRTSLKKFAI---SFMKSGNINLI 602
                   +   ML      G ++     +K   E     S   F I    F +     L 
Sbjct: 390  SNKYDIVILNSMLCAFCRVGEMESVMETLKKMDELAISPSYNTFHILIKYFCREKMYLLA 449

Query: 601  NDVMKAVHSSDHKIDQEVFDMAISRYIGQ 515
               MK +HS  H+  +E+    IS ++GQ
Sbjct: 450  YRTMKDMHSKGHQPGEELCSTLIS-HLGQ 477


>ref|XP_003531588.2| PREDICTED: pentatricopeptide repeat-containing protein At1g10910,
            chloroplastic-like [Glycine max]
          Length = 646

 Score =  601 bits (1550), Expect = e-169
 Identities = 294/439 (66%), Positives = 364/439 (82%)
 Frame = -3

Query: 1687 LLAGCIKDKHLYSKALQLLQELKDNGLHMDSVIYGTLLSICASNNRCEEAEAFFQQMKDE 1508
            LLAGCIK ++ Y+KAL+L+QEL+ N L MD VIYGT++++CASN + EEAE +F QMKDE
Sbjct: 197  LLAGCIKIENGYAKALELIQELQHNKLQMDGVIYGTIMAVCASNTKWEEAEYYFNQMKDE 256

Query: 1507 GFSPNLFHYSALLNAYSMDANYAKADDLVKEMKSTGLVPNKVILTTLLKVYVRAGLFERS 1328
            G +PN++HYS+L+NAYS   NY KAD L+++MKS GLVPNKVILTTLLKVYV+ GLFE+S
Sbjct: 257  GHTPNVYHYSSLINAYSACGNYKKADMLIQDMKSEGLVPNKVILTTLLKVYVKGGLFEKS 316

Query: 1327 RELFVELEALGYAEDEMPYCLLMDGFAKAGHIHEAKSIFDEMETKDVKSDGYSHSIMISA 1148
            REL  EL++LGYAEDEMPYC+ MDG AKAG IHEAK IFDEM    V+SDGY+HSIMISA
Sbjct: 317  RELLAELKSLGYAEDEMPYCIFMDGLAKAGQIHEAKLIFDEMMKNHVRSDGYAHSIMISA 376

Query: 1147 FCRSGLLEEAKQLARDFDAKYDKYDLVMLNTMLRAYCRAGEMESVMQMLRKMDELKISPD 968
            FCR+ L  EAKQLA+DF+   +KYDLV+LN+ML A+CR GEME VM+ L+KMDEL I+P 
Sbjct: 377  FCRAKLFREAKQLAKDFETTSNKYDLVILNSMLCAFCRVGEMERVMETLKKMDELAINPG 436

Query: 967  WNTFHILIKYFFKERLYQLAYKTIVDMHSKGYQPDEELCASLILQLGKVGSSSEAFSIYN 788
            +NTFHILIKYF +E++Y LAY+T+ DMHSKG+QP EELC+SLI  LG+V + SEAFS+YN
Sbjct: 437  YNTFHILIKYFCREKMYLLAYRTMKDMHSKGHQPVEELCSSLISHLGQVNAYSEAFSVYN 496

Query: 787  ILRYSKRTMCKALHGKMLNILVAGGLLKDAYVVVKDNAERISRTSLKKFAISFMKSGNIN 608
            +L+YSKRTMCK+LH K+L+IL+AG LLKDAYVVVKDNA+ ISR + KKFA +FMKSGN+N
Sbjct: 497  MLKYSKRTMCKSLHEKILHILLAGQLLKDAYVVVKDNAKFISRPATKKFASAFMKSGNLN 556

Query: 607  LINDVMKAVHSSDHKIDQEVFDMAISRYIGQPXXXXXXXXXXQWMTGQGYVVDSSSRNLL 428
             INDV+K +H   +K+DQ++F MA+SRY+ QP          QWM GQGY VDSS+RNL+
Sbjct: 557  YINDVLKTLHDCGYKLDQDLFAMAVSRYLDQPEKKDLLLHLLQWMAGQGYAVDSSTRNLI 616

Query: 427  LKNSDLFGRHLIADILSKQ 371
            LKNS LFGR LIA++LSKQ
Sbjct: 617  LKNSHLFGRQLIAEVLSKQ 635


>ref|XP_004486236.1| PREDICTED: pentatricopeptide repeat-containing protein At1g10910,
            chloroplastic-like [Cicer arietinum]
          Length = 642

 Score =  598 bits (1542), Expect = e-168
 Identities = 294/439 (66%), Positives = 363/439 (82%)
 Frame = -3

Query: 1687 LLAGCIKDKHLYSKALQLLQELKDNGLHMDSVIYGTLLSICASNNRCEEAEAFFQQMKDE 1508
            L+AGC+K K  YSKALQL+QEL+DN L MD+VIYG +L++CASN + EEAE +F  MK+E
Sbjct: 193  LIAGCVKVKDGYSKALQLIQELQDNKLRMDNVIYGAILAVCASNGKWEEAEHYFNGMKNE 252

Query: 1507 GFSPNLFHYSALLNAYSMDANYAKADDLVKEMKSTGLVPNKVILTTLLKVYVRAGLFERS 1328
            G SPN++HYS+LLNAYS   N+ KAD L+++MKS GLVPNKVILTTLLKVYVR GL E+S
Sbjct: 253  GHSPNVYHYSSLLNAYSASGNFKKADSLIQDMKSEGLVPNKVILTTLLKVYVRGGLLEKS 312

Query: 1327 RELFVELEALGYAEDEMPYCLLMDGFAKAGHIHEAKSIFDEMETKDVKSDGYSHSIMISA 1148
            REL  +LE+L YAEDEMPYC+LMDG AKAG +HEAK +FDEM  K V+SDGY+HSIMISA
Sbjct: 313  RELLTKLESLSYAEDEMPYCVLMDGLAKAGQVHEAKIVFDEMMKKHVRSDGYAHSIMISA 372

Query: 1147 FCRSGLLEEAKQLARDFDAKYDKYDLVMLNTMLRAYCRAGEMESVMQMLRKMDELKISPD 968
            FCR+ L EEAKQLA++F   ++KYD+V++N+ML A+CRAGEMESVM+ LRKMDEL ISPD
Sbjct: 373  FCRAKLFEEAKQLAKNFQTTFNKYDVVIMNSMLCAFCRAGEMESVMETLRKMDELAISPD 432

Query: 967  WNTFHILIKYFFKERLYQLAYKTIVDMHSKGYQPDEELCASLILQLGKVGSSSEAFSIYN 788
            +NTF+ILIKYF ++ +Y LAY+T+ DMHSKGYQP EELC+SLI  LG+  + SEAFS+YN
Sbjct: 433  YNTFNILIKYFCRQNMYLLAYQTMEDMHSKGYQPVEELCSSLIYHLGQANAYSEAFSVYN 492

Query: 787  ILRYSKRTMCKALHGKMLNILVAGGLLKDAYVVVKDNAERISRTSLKKFAISFMKSGNIN 608
            +L+YSKRT+ K LH K+L+IL+AG LLKDAYVV KDNA  IS  + KKFA +FMK GNIN
Sbjct: 493  MLKYSKRTIRKTLHEKILHILLAGKLLKDAYVVFKDNATFISGHTTKKFASAFMKLGNIN 552

Query: 607  LINDVMKAVHSSDHKIDQEVFDMAISRYIGQPXXXXXXXXXXQWMTGQGYVVDSSSRNLL 428
            LINDVMK +H+  +KIDQ++F+MA++RY+GQP          QWM GQGYVVD S+RNL+
Sbjct: 553  LINDVMKTLHNCGYKIDQDLFEMAVTRYLGQPEKKDLLLHLLQWMPGQGYVVDPSTRNLI 612

Query: 427  LKNSDLFGRHLIADILSKQ 371
            LKNS LFGR LIA++LSKQ
Sbjct: 613  LKNSHLFGRQLIAEVLSKQ 631



 Score = 73.6 bits (179), Expect = 3e-10
 Identities = 52/222 (23%), Positives = 106/222 (47%), Gaps = 2/222 (0%)
 Frame = -3

Query: 1603 MDSVIYGTLLSICASNNRCEEAEAFFQQMKDEGFSPNLFHYSALLNAYSMDANYAKADDL 1424
            +D   Y   +   A+          +  ++DE    N++  +++L+       +  A  L
Sbjct: 115  LDVYSYSNYIKFMANKLDASTVLKLYNNIQDESAKDNVYVCNSVLSCLIKKGKFDTAIKL 174

Query: 1423 VKEMKSTGLVPNKVILTTLLK--VYVRAGLFERSRELFVELEALGYAEDEMPYCLLMDGF 1250
              +MK  GLVP+ V  + L+   V V+ G + ++ +L  EL+      D + Y  ++   
Sbjct: 175  FHQMKQDGLVPDLVTYSMLIAGCVKVKDG-YSKALQLIQELQDNKLRMDNVIYGAILAVC 233

Query: 1249 AKAGHIHEAKSIFDEMETKDVKSDGYSHSIMISAFCRSGLLEEAKQLARDFDAKYDKYDL 1070
            A  G   EA+  F+ M+ +    + Y +S +++A+  SG  ++A  L +D  ++    + 
Sbjct: 234  ASNGKWEEAEHYFNGMKNEGHSPNVYHYSSLLNAYSASGNFKKADSLIQDMKSEGLVPNK 293

Query: 1069 VMLNTMLRAYCRAGEMESVMQMLRKMDELKISPDWNTFHILI 944
            V+L T+L+ Y R G +E   ++L K++ L  + D   + +L+
Sbjct: 294  VILTTLLKVYVRGGLLEKSRELLTKLESLSYAEDEMPYCVLM 335


>ref|XP_002889841.1| hypothetical protein ARALYDRAFT_888388 [Arabidopsis lyrata subsp.
            lyrata] gi|297335683|gb|EFH66100.1| hypothetical protein
            ARALYDRAFT_888388 [Arabidopsis lyrata subsp. lyrata]
          Length = 665

 Score =  596 bits (1536), Expect = e-167
 Identities = 295/444 (66%), Positives = 365/444 (82%)
 Frame = -3

Query: 1687 LLAGCIKDKHLYSKALQLLQELKDNGLHMDSVIYGTLLSICASNNRCEEAEAFFQQMKDE 1508
            LLAGCIK K+ Y KA++L+ EL  NG+ MDSV+YGT+L+ICASN RCEEAE F QQMK E
Sbjct: 208  LLAGCIKVKNGYPKAVELIGELPHNGIQMDSVMYGTVLAICASNGRCEEAENFIQQMKAE 267

Query: 1507 GFSPNLFHYSALLNAYSMDANYAKADDLVKEMKSTGLVPNKVILTTLLKVYVRAGLFERS 1328
            G SPN++HYS+LLN+YS   +Y KAD+L+ EMKS GLVPNKV++TTLLKVY++ GLF+RS
Sbjct: 268  GHSPNIYHYSSLLNSYSWKGDYKKADELMTEMKSIGLVPNKVMMTTLLKVYIKGGLFDRS 327

Query: 1327 RELFVELEALGYAEDEMPYCLLMDGFAKAGHIHEAKSIFDEMETKDVKSDGYSHSIMISA 1148
            REL  ELE+ GYAE+EMPYC+LMDG +KAG + EA+SIFD+M+ K VKSDGY++SIMISA
Sbjct: 328  RELLSELESAGYAENEMPYCMLMDGLSKAGKLEEARSIFDDMKGKGVKSDGYANSIMISA 387

Query: 1147 FCRSGLLEEAKQLARDFDAKYDKYDLVMLNTMLRAYCRAGEMESVMQMLRKMDELKISPD 968
             CRS   EEAK+L+RD +  Y+K DLVMLNTML AYCRAGEMESVM+M++KMDE  I PD
Sbjct: 388  LCRSKRFEEAKELSRDSETTYEKCDLVMLNTMLCAYCRAGEMESVMRMMKKMDEQAIIPD 447

Query: 967  WNTFHILIKYFFKERLYQLAYKTIVDMHSKGYQPDEELCASLILQLGKVGSSSEAFSIYN 788
            +NTFHILIKYF KE+L+ LAY+T +DMHSKG++ +EELC+SLI  LGK+ + SEAFS+YN
Sbjct: 448  YNTFHILIKYFIKEKLHLLAYQTTLDMHSKGHRLEEELCSSLIYHLGKIRAPSEAFSVYN 507

Query: 787  ILRYSKRTMCKALHGKMLNILVAGGLLKDAYVVVKDNAERISRTSLKKFAISFMKSGNIN 608
            +LRYSKRT+CK LH K+L+IL+ G LLKDAY+VVKDNA+ IS+ +LKKF  +FM SGNIN
Sbjct: 508  MLRYSKRTICKELHEKILHILIHGDLLKDAYIVVKDNAKMISQPTLKKFGRAFMISGNIN 567

Query: 607  LINDVMKAVHSSDHKIDQEVFDMAISRYIGQPXXXXXXXXXXQWMTGQGYVVDSSSRNLL 428
            L+NDV+K +H S HKIDQ  F++AISRYI  P          QWM GQGY+VDSS+RNL+
Sbjct: 568  LVNDVLKVLHGSGHKIDQVQFEIAISRYILLPDKKELLLQLLQWMPGQGYIVDSSTRNLI 627

Query: 427  LKNSDLFGRHLIADILSKQHKMSK 356
            LKNS +FGR LIA+ILSK H  S+
Sbjct: 628  LKNSHMFGRLLIAEILSKHHVASR 651



 Score = 64.3 bits (155), Expect = 2e-07
 Identities = 73/370 (19%), Positives = 153/370 (41%), Gaps = 5/370 (1%)
 Frame = -3

Query: 1642 LQLLQELKDNGLHMDSVIYGTLLSICASNNRCEEAEAFFQQMKDEGFSPNLFHYSALLNA 1463
            +QL   ++ +G    S     +  + A N    +A   +Q + DE    N++  +++L+ 
Sbjct: 119  IQLFDWMQQHGKISVSTYSSCIKFVGAKN--VSKALEIYQSIPDESTKINVYICNSILSC 176

Query: 1462 YSMDANYAKADDLVKEMKSTGLVPNKVILTTLLK--VYVRAGLFERSRELFVELEALGYA 1289
               +        L  +MK  GL P+ +   TLL   + V+ G + ++ EL  EL   G  
Sbjct: 177  LVKNGKLDSCIKLFDQMKRGGLKPDVITYNTLLAGCIKVKNG-YPKAVELIGELPHNGIQ 235

Query: 1288 EDEMPYCLLMDGFAKAGHIHEAKSIFDEMETKDVKSDGYSHSIMISAFCRSGLLEEAKQL 1109
             D + Y  ++   A  G   EA++   +M+ +    + Y +S +++++   G  ++A +L
Sbjct: 236  MDSVMYGTVLAICASNGRCEEAENFIQQMKAEGHSPNIYHYSSLLNSYSWKGDYKKADEL 295

Query: 1108 ARDFDAKYDKYDLVMLNTMLRAYCRAGEMESVMQMLRKMDELKISPDWNTFHILIKYFFK 929
              +  +     + VM+ T+L+ Y + G  +   ++L +++    + +   + +L+    K
Sbjct: 296  MTEMKSIGLVPNKVMMTTLLKVYIKGGLFDRSRELLSELESAGYAENEMPYCMLMDGLSK 355

Query: 928  ERLYQLAYKTIVDMHSKGYQPDEELCASLILQLGKVGSSSEAFSIYNILRYSKRTMCKAL 749
                + A     DM  KG + D    + +I  L +     EA  +      +       +
Sbjct: 356  AGKLEEARSIFDDMKGKGVKSDGYANSIMISALCRSKRFEEAKELSRDSETTYEKCDLVM 415

Query: 748  HGKMLNILVAGGLLKDAYVVVKDNAERISRTSLKKFAI---SFMKSGNINLINDVMKAVH 578
               ML      G ++    ++K   E+        F I    F+K     L       +H
Sbjct: 416  LNTMLCAYCRAGEMESVMRMMKKMDEQAIIPDYNTFHILIKYFIKEKLHLLAYQTTLDMH 475

Query: 577  SSDHKIDQEV 548
            S  H++++E+
Sbjct: 476  SKGHRLEEEL 485