BLASTX nr result
ID: Akebia27_contig00000369
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Akebia27_contig00000369
(1052 letters)
Database: ./nr
38,876,450 sequences; 13,856,398,315 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
emb|CBI40152.3| unnamed protein product [Vitis vinifera] 135 4e-52
ref|XP_002265533.1| PREDICTED: DNA-directed RNA polymerase E sub... 135 4e-52
ref|XP_004140346.1| PREDICTED: LOW QUALITY PROTEIN: DNA-directed... 125 6e-49
ref|XP_004155767.1| PREDICTED: DNA-directed RNA polymerase E sub... 125 6e-49
ref|XP_002303926.2| hypothetical protein POPTR_0003s19630g [Popu... 128 5e-47
ref|XP_007218881.1| hypothetical protein PRUPE_ppa000088mg [Prun... 127 2e-45
ref|XP_006420718.1| hypothetical protein CICLE_v10004129mg [Citr... 124 2e-45
ref|XP_006470866.1| PREDICTED: DNA-directed RNA polymerase V sub... 121 8e-45
ref|XP_007010999.1| DNA-directed RNA polymerase E subunit 1, put... 112 5e-44
ref|XP_004308588.1| PREDICTED: DNA-directed RNA polymerase E sub... 119 9e-44
gb|EXB62675.1| DNA-directed RNA polymerase E subunit 1 [Morus no... 116 3e-43
gb|EYU38281.1| hypothetical protein MIMGU_mgv1a000048mg [Mimulus... 109 6e-39
ref|XP_007133762.1| hypothetical protein PHAVU_011G206900g [Phas... 96 5e-38
gb|AAX12374.1| DNA-directed RNA polymerase alpha subunit [Spinac... 102 6e-38
ref|XP_006598109.1| PREDICTED: DNA-directed RNA polymerase V sub... 95 3e-36
ref|XP_003541591.1| PREDICTED: DNA-directed RNA polymerase V sub... 93 1e-35
ref|XP_004511031.1| PREDICTED: DNA-directed RNA polymerase E sub... 96 1e-35
ref|XP_003627838.1| DNA-directed RNA polymerase subunit [Medicag... 94 4e-35
ref|XP_003627850.1| Protein DCL [Medicago truncatula] gi|3555218... 94 4e-35
ref|XP_002879839.1| NRPD1b [Arabidopsis lyrata subsp. lyrata] gi... 99 5e-35
>emb|CBI40152.3| unnamed protein product [Vitis vinifera]
Length = 1890
Score = 135 bits (339), Expect(2) = 4e-52
Identities = 77/151 (50%), Positives = 97/151 (64%), Gaps = 7/151 (4%)
Frame = -2
Query: 1033 WGQWRESHTKPSEE---SPSYGGWNIRKSEKRPCDAWGQRDGE----EGTGGWNKSEGKS 875
WG E + PS + SP+ G + +++ + WGQ G+ EG+ GW
Sbjct: 1650 WGPSNEQNQLPSSQGWGSPNAGAGHESETQSQ----WGQPSGKKSRPEGSRGWG------ 1699
Query: 874 QSSNAGDWKIKKGRAAMSPGKFDDRNDWSASGIFTATRQRLDQFTSEEQNILSDVEPILQ 695
SN +WK KK R G +D D+SA GIFTATRQR+D FTSEEQ+IL DVEPI+Q
Sbjct: 1700 --SNNTEWKNKKNRPNKPQGPLND--DYSAGGIFTATRQRVDIFTSEEQDILLDVEPIMQ 1755
Query: 694 SIKRIMHQSRYNDGDPLTADDQSYVLDHVFN 602
SI+RIMHQ+ YNDGDPL+ADDQSY+LD VFN
Sbjct: 1756 SIRRIMHQAGYNDGDPLSADDQSYILDKVFN 1786
Score = 98.2 bits (243), Expect(2) = 4e-52
Identities = 41/54 (75%), Positives = 50/54 (92%)
Frame = -3
Query: 585 HSSFQDTRCFYIVSTDGHREDFSYRKCMENFIKDKYPGMAESFIKKYFRKPRSG 424
HSSF ++RCFY+VSTDGH+EDFSYRKC+ENFIK+KYP AE+FI KYFR+PR+G
Sbjct: 1807 HSSFLESRCFYVVSTDGHKEDFSYRKCLENFIKEKYPDNAETFIGKYFRRPRAG 1860
>ref|XP_002265533.1| PREDICTED: DNA-directed RNA polymerase E subunit 1 [Vitis vinifera]
Length = 1830
Score = 135 bits (339), Expect(2) = 4e-52
Identities = 77/151 (50%), Positives = 97/151 (64%), Gaps = 7/151 (4%)
Frame = -2
Query: 1033 WGQWRESHTKPSEE---SPSYGGWNIRKSEKRPCDAWGQRDGE----EGTGGWNKSEGKS 875
WG E + PS + SP+ G + +++ + WGQ G+ EG+ GW
Sbjct: 1590 WGPSNEQNQLPSSQGWGSPNAGAGHESETQSQ----WGQPSGKKSRPEGSRGWG------ 1639
Query: 874 QSSNAGDWKIKKGRAAMSPGKFDDRNDWSASGIFTATRQRLDQFTSEEQNILSDVEPILQ 695
SN +WK KK R G +D D+SA GIFTATRQR+D FTSEEQ+IL DVEPI+Q
Sbjct: 1640 --SNNTEWKNKKNRPNKPQGPLND--DYSAGGIFTATRQRVDIFTSEEQDILLDVEPIMQ 1695
Query: 694 SIKRIMHQSRYNDGDPLTADDQSYVLDHVFN 602
SI+RIMHQ+ YNDGDPL+ADDQSY+LD VFN
Sbjct: 1696 SIRRIMHQAGYNDGDPLSADDQSYILDKVFN 1726
Score = 98.2 bits (243), Expect(2) = 4e-52
Identities = 41/54 (75%), Positives = 50/54 (92%)
Frame = -3
Query: 585 HSSFQDTRCFYIVSTDGHREDFSYRKCMENFIKDKYPGMAESFIKKYFRKPRSG 424
HSSF ++RCFY+VSTDGH+EDFSYRKC+ENFIK+KYP AE+FI KYFR+PR+G
Sbjct: 1747 HSSFLESRCFYVVSTDGHKEDFSYRKCLENFIKEKYPDNAETFIGKYFRRPRAG 1800
>ref|XP_004140346.1| PREDICTED: LOW QUALITY PROTEIN: DNA-directed RNA polymerase E subunit
1-like [Cucumis sativus]
Length = 2019
Score = 125 bits (315), Expect(2) = 6e-49
Identities = 73/170 (42%), Positives = 99/170 (58%), Gaps = 19/170 (11%)
Frame = -2
Query: 1051 NDGNPQWGQWRESHTKPSEESPSYG--------------GWNIRKSEKRPCDAWGQ-RDG 917
ND WGQ + + + S ES GW +KS + WG ++
Sbjct: 1746 NDSLGSWGQPQRASEECSRESQDDSSTQFSQLKPPETSLGWEQQKSPE-VSHGWGSNKES 1804
Query: 916 EEGTG--GWNKSE--GKSQSSNAGDWKIKKGRAAMSPGKFDDRNDWSASGIFTATRQRLD 749
E T GW+K K NAG+WK +K R SPG +D D + ++TA+ QRLD
Sbjct: 1805 SEQTSSHGWDKKNQGSKGWGGNAGEWKNRKNRPPKSPGMSND--DANLRALYTASGQRLD 1862
Query: 748 QFTSEEQNILSDVEPILQSIKRIMHQSRYNDGDPLTADDQSYVLDHVFNY 599
FTSEEQ+IL+D+EPI+QSI+++MHQS YNDGDPL+A+DQS+VL VFN+
Sbjct: 1863 MFTSEEQDILADIEPIMQSIRKVMHQSGYNDGDPLSAEDQSFVLQSVFNF 1912
Score = 96.7 bits (239), Expect(2) = 6e-49
Identities = 39/52 (75%), Positives = 48/52 (92%)
Frame = -3
Query: 585 HSSFQDTRCFYIVSTDGHREDFSYRKCMENFIKDKYPGMAESFIKKYFRKPR 430
HSSFQ++RCFY+V+TDGH+EDFSYRKC++NFIK KYP +AE F+ KYFRKPR
Sbjct: 1932 HSSFQESRCFYVVTTDGHKEDFSYRKCLDNFIKGKYPDLAEMFVAKYFRKPR 1983
>ref|XP_004155767.1| PREDICTED: DNA-directed RNA polymerase E subunit 1-like [Cucumis
sativus]
Length = 1959
Score = 125 bits (315), Expect(2) = 6e-49
Identities = 73/170 (42%), Positives = 99/170 (58%), Gaps = 19/170 (11%)
Frame = -2
Query: 1051 NDGNPQWGQWRESHTKPSEESPSYG--------------GWNIRKSEKRPCDAWGQ-RDG 917
ND WGQ + + + S ES GW +KS + WG ++
Sbjct: 1686 NDSLGSWGQPQRASEECSRESQDDSSTQFSQLKPPETSLGWEQQKSPE-VSHGWGSHKES 1744
Query: 916 EEGTG--GWNKSE--GKSQSSNAGDWKIKKGRAAMSPGKFDDRNDWSASGIFTATRQRLD 749
E T GW+K K NAG+WK +K R SPG +D D + ++TA+ QRLD
Sbjct: 1745 SEQTSSHGWDKKNQGSKGWGGNAGEWKNRKNRPPKSPGMSND--DANLRALYTASGQRLD 1802
Query: 748 QFTSEEQNILSDVEPILQSIKRIMHQSRYNDGDPLTADDQSYVLDHVFNY 599
FTSEEQ+IL+D+EPI+QSI+++MHQS YNDGDPL+A+DQS+VL VFN+
Sbjct: 1803 MFTSEEQDILADIEPIMQSIRKVMHQSGYNDGDPLSAEDQSFVLQSVFNF 1852
Score = 96.7 bits (239), Expect(2) = 6e-49
Identities = 39/52 (75%), Positives = 48/52 (92%)
Frame = -3
Query: 585 HSSFQDTRCFYIVSTDGHREDFSYRKCMENFIKDKYPGMAESFIKKYFRKPR 430
HSSFQ++RCFY+V+TDGH+EDFSYRKC++NFIK KYP +AE F+ KYFRKPR
Sbjct: 1872 HSSFQESRCFYVVTTDGHKEDFSYRKCLDNFIKGKYPDLAEMFVAKYFRKPR 1923
>ref|XP_002303926.2| hypothetical protein POPTR_0003s19630g [Populus trichocarpa]
gi|550343552|gb|EEE78905.2| hypothetical protein
POPTR_0003s19630g [Populus trichocarpa]
Length = 1920
Score = 128 bits (322), Expect(2) = 5e-47
Identities = 76/159 (47%), Positives = 93/159 (58%), Gaps = 10/159 (6%)
Frame = -2
Query: 1045 GNPQWGQWRESHTKPSEESPSYGGWNIRKSE----KRPCDAWGQRDGE------EGTGGW 896
G P+ E P E + GW + S WGQ+ E EG+ GW
Sbjct: 1687 GKPKSPALSEGWGSPREPVKAVHGWGVPNSGGGNGSGRDQQWGQQSREFKKDRFEGSRGW 1746
Query: 895 NKSEGKSQSSNAGDWKIKKGRAAMSPGKFDDRNDWSASGIFTATRQRLDQFTSEEQNILS 716
SN GDWK K+ R P K D +ASGIFT TRQRLD FTS+EQ+ILS
Sbjct: 1747 G--------SNNGDWKNKRNR----PSK--PHEDLNASGIFTTTRQRLDVFTSQEQDILS 1792
Query: 715 DVEPILQSIKRIMHQSRYNDGDPLTADDQSYVLDHVFNY 599
D+EP++ SI+RIMHQ+ YNDGDPL+ADDQSYVLD+VF+Y
Sbjct: 1793 DIEPLMLSIRRIMHQTGYNDGDPLSADDQSYVLDNVFHY 1831
Score = 87.4 bits (215), Expect(2) = 5e-47
Identities = 40/60 (66%), Positives = 48/60 (80%), Gaps = 2/60 (3%)
Frame = -3
Query: 585 HSSFQDTRCFYIVSTDGHREDFSYRKCMENFIKDKYPGMAESFIKKYF--RKPRSGNPAP 412
HS+FQ++RCFYIVSTDG ++DFSYRKC+ENFIK KYP +A+ FI KYF R R PAP
Sbjct: 1851 HSNFQESRCFYIVSTDGCKQDFSYRKCLENFIKGKYPDLADEFIAKYFARRGNRQRTPAP 1910
>ref|XP_007218881.1| hypothetical protein PRUPE_ppa000088mg [Prunus persica]
gi|462415343|gb|EMJ20080.1| hypothetical protein
PRUPE_ppa000088mg [Prunus persica]
Length = 1855
Score = 127 bits (320), Expect(2) = 2e-45
Identities = 67/141 (47%), Positives = 95/141 (67%), Gaps = 4/141 (2%)
Frame = -2
Query: 1009 TKPSEESPSYGGWNIRKSEKRPCDA---WGQRDGEEGTGGWNKSEG-KSQSSNAGDWKIK 842
TKP ++S S GW+ + + WGQ G++ N+ EG ++ S+ G+WK
Sbjct: 1620 TKPQDDSASLSGWDSPTGDGNSGERNHQWGQHRGDQTKK--NRFEGARNWVSSPGEWK-N 1676
Query: 841 KGRAAMSPGKFDDRNDWSASGIFTATRQRLDQFTSEEQNILSDVEPILQSIKRIMHQSRY 662
K R SPG +D + A ++T TRQRLD FTSEEQ++LS++EP+++S++RIMHQS Y
Sbjct: 1677 KNRPPKSPGMVNDNSTMGA--LYTVTRQRLDMFTSEEQDVLSNIEPVMRSLRRIMHQSGY 1734
Query: 661 NDGDPLTADDQSYVLDHVFNY 599
NDGDPL+ DDQS+VLD+VFNY
Sbjct: 1735 NDGDPLSGDDQSFVLDNVFNY 1755
Score = 83.2 bits (204), Expect(2) = 2e-45
Identities = 36/58 (62%), Positives = 47/58 (81%), Gaps = 2/58 (3%)
Frame = -3
Query: 585 HSSFQDTRCFYIVSTDGHREDFSYRKCMENFIKDKYPGMAESFIKKYF--RKPRSGNP 418
H SFQD+RCF++VSTDG EDFSYRKC++N+I++K+P +AE+FI KYF R R NP
Sbjct: 1775 HGSFQDSRCFFVVSTDGRTEDFSYRKCLDNYIREKFPDLAETFIGKYFSRRGNRERNP 1832
>ref|XP_006420718.1| hypothetical protein CICLE_v10004129mg [Citrus clementina]
gi|557522591|gb|ESR33958.1| hypothetical protein
CICLE_v10004129mg [Citrus clementina]
Length = 1867
Score = 124 bits (311), Expect(2) = 2e-45
Identities = 70/149 (46%), Positives = 95/149 (63%), Gaps = 4/149 (2%)
Frame = -2
Query: 1033 WGQWRESHTKPSEESP-SYGGWNIRKS---EKRPCDAWGQRDGEEGTGGWNKSEGKSQSS 866
WG ++ HT+ P S W++ + + WGQ E + K+ G + SS
Sbjct: 1637 WG--KQKHTENESSQPASSNAWDLPDATGGSETEMQVWGQSRKEP----FKKNRGWASSS 1690
Query: 865 NAGDWKIKKGRAAMSPGKFDDRNDWSASGIFTATRQRLDQFTSEEQNILSDVEPILQSIK 686
G+WK KK R SPG +D D + + ++T TRQRLD FTSEEQ+ILSDVEPI++SI+
Sbjct: 1691 --GEWKGKKNRPPRSPGVVND--DSTVNAMYTVTRQRLDMFTSEEQDILSDVEPIMRSIR 1746
Query: 685 RIMHQSRYNDGDPLTADDQSYVLDHVFNY 599
RIMHQS YNDGD L+ADD+S++ D+VFNY
Sbjct: 1747 RIMHQSGYNDGDRLSADDKSFIFDNVFNY 1775
Score = 86.3 bits (212), Expect(2) = 2e-45
Identities = 35/54 (64%), Positives = 45/54 (83%)
Frame = -3
Query: 585 HSSFQDTRCFYIVSTDGHREDFSYRKCMENFIKDKYPGMAESFIKKYFRKPRSG 424
H SFQD+RC ++VSTDG ++DFSYRKC+E+FI+ KYP + FI KYFR+PRSG
Sbjct: 1795 HGSFQDSRCLFVVSTDGSQQDFSYRKCLESFIRGKYPEFVDEFIGKYFRRPRSG 1848
>ref|XP_006470866.1| PREDICTED: DNA-directed RNA polymerase V subunit 1-like [Citrus
sinensis]
Length = 1865
Score = 121 bits (303), Expect(2) = 8e-45
Identities = 69/149 (46%), Positives = 94/149 (63%), Gaps = 4/149 (2%)
Frame = -2
Query: 1033 WGQWRESHTKPSEESP-SYGGWNIRKS---EKRPCDAWGQRDGEEGTGGWNKSEGKSQSS 866
WG ++ HT+ P S W++ + + WGQ E + K+ G + SS
Sbjct: 1635 WG--KQKHTENESPQPASSNAWDLPDATGGSETEMQVWGQSRKEP----FKKNRGWASSS 1688
Query: 865 NAGDWKIKKGRAAMSPGKFDDRNDWSASGIFTATRQRLDQFTSEEQNILSDVEPILQSIK 686
G+WK KK R SPG +D D + + ++T TRQRLD FTSEEQ+ILS VEPI++SI+
Sbjct: 1689 --GEWKGKKNRPPRSPGVVND--DSTVNAMYTVTRQRLDMFTSEEQDILSHVEPIMRSIR 1744
Query: 685 RIMHQSRYNDGDPLTADDQSYVLDHVFNY 599
RIMHQS YNDGD L+ADD+S++ D+VFNY
Sbjct: 1745 RIMHQSGYNDGDRLSADDKSFIFDNVFNY 1773
Score = 87.4 bits (215), Expect(2) = 8e-45
Identities = 35/54 (64%), Positives = 46/54 (85%)
Frame = -3
Query: 585 HSSFQDTRCFYIVSTDGHREDFSYRKCMENFIKDKYPGMAESFIKKYFRKPRSG 424
H SFQD+RC ++VSTDG ++DFSYRKC+E+FI+ KYP + + FI KYFR+PRSG
Sbjct: 1793 HGSFQDSRCLFVVSTDGSQQDFSYRKCLESFIRGKYPDLVDEFIGKYFRRPRSG 1846
>ref|XP_007010999.1| DNA-directed RNA polymerase E subunit 1, putative isoform 1
[Theobroma cacao] gi|590569189|ref|XP_007011000.1|
DNA-directed RNA polymerase E subunit 1, putative isoform
1 [Theobroma cacao] gi|508727912|gb|EOY19809.1|
DNA-directed RNA polymerase E subunit 1, putative isoform
1 [Theobroma cacao] gi|508727913|gb|EOY19810.1|
DNA-directed RNA polymerase E subunit 1, putative isoform
1 [Theobroma cacao]
Length = 1788
Score = 112 bits (281), Expect(2) = 5e-44
Identities = 70/168 (41%), Positives = 94/168 (55%), Gaps = 17/168 (10%)
Frame = -2
Query: 1051 NDGNPQ--WGQWRESHTKPSEESPSYGGWNIRKSEKRPCDAWGQRDGEE---GTGGWNKS 887
ND P WG TK ++S GW +KS + WG D + GW+
Sbjct: 1531 NDALPWSGWGTQDVIPTKTLDDSSKSSGWEQQKSPECS-QGWGSLDESNQPASSNGWDTP 1589
Query: 886 EG--KSQSSNAGDWKIKKG--RAAMSPGKFDD--------RNDWSASGIFTATRQRLDQF 743
G +QS W +G R A K + +D S + ++TATRQRLD F
Sbjct: 1590 NGLGSTQSEKQHQWGQSRGSRRWASDASKKNHPVKSARVMNDDSSMAAMYTATRQRLDMF 1649
Query: 742 TSEEQNILSDVEPILQSIKRIMHQSRYNDGDPLTADDQSYVLDHVFNY 599
TSEEQ+ILSDVEP++QSI++IMHQS YNDGDPL+A DQS++L++VF +
Sbjct: 1650 TSEEQDILSDVEPLMQSIRKIMHQSGYNDGDPLSALDQSFILENVFTH 1697
Score = 93.2 bits (230), Expect(2) = 5e-44
Identities = 39/54 (72%), Positives = 47/54 (87%)
Frame = -3
Query: 585 HSSFQDTRCFYIVSTDGHREDFSYRKCMENFIKDKYPGMAESFIKKYFRKPRSG 424
HS+F D+RCFY+VSTDG ++DFSYRKC++NFIK KYP MA+ FI KYFRKPR G
Sbjct: 1717 HSNFPDSRCFYVVSTDGRKQDFSYRKCLDNFIKGKYPDMADVFIAKYFRKPRFG 1770
>ref|XP_004308588.1| PREDICTED: DNA-directed RNA polymerase E subunit 1-like [Fragaria
vesca subsp. vesca]
Length = 1991
Score = 119 bits (297), Expect(2) = 9e-44
Identities = 65/146 (44%), Positives = 87/146 (59%), Gaps = 2/146 (1%)
Frame = -2
Query: 1030 GQWRESHTKPSEESPSYGGWNIRKSEKRPCDAWGQRDGEEGTGGWNK--SEGKSQSSNAG 857
G W + + + + W+ S+ Q+ G G K G+S NAG
Sbjct: 1761 GSWGQQKPSDTSQPATVNQWD---SQSEAAVERHQQWGHNGDSNKRKRFEGGRSWGPNAG 1817
Query: 856 DWKIKKGRAAMSPGKFDDRNDWSASGIFTATRQRLDQFTSEEQNILSDVEPILQSIKRIM 677
+WK K R A SPG +D D S + I+TATRQRLD FTSEEQ++LS +EP + SI+RIM
Sbjct: 1818 EWKGKNSRPAKSPGMVND--DSSVAAIYTATRQRLDIFTSEEQDVLSHIEPTMLSIRRIM 1875
Query: 676 HQSRYNDGDPLTADDQSYVLDHVFNY 599
HQS YNDGD L+A+D S++LD VFN+
Sbjct: 1876 HQSGYNDGDQLSAEDHSFILDKVFNF 1901
Score = 86.3 bits (212), Expect(2) = 9e-44
Identities = 34/56 (60%), Positives = 46/56 (82%)
Frame = -3
Query: 585 HSSFQDTRCFYIVSTDGHREDFSYRKCMENFIKDKYPGMAESFIKKYFRKPRSGNP 418
H SFQ++RC +++STDG +EDFSYRKC++N IK+KYP +AE+F KYF +PR NP
Sbjct: 1921 HGSFQESRCLFVISTDGRKEDFSYRKCLQNMIKEKYPELAEAFNDKYFSRPRPRNP 1976
>gb|EXB62675.1| DNA-directed RNA polymerase E subunit 1 [Morus notabilis]
Length = 2054
Score = 116 bits (291), Expect(2) = 3e-43
Identities = 67/156 (42%), Positives = 94/156 (60%), Gaps = 11/156 (7%)
Frame = -2
Query: 1033 WGQWRESHTKPSEESPSYGGWNIRKSE----KRPCDAWGQRDGE------EGTGGWNKSE 884
W + S + ES S+ W R + ++P + W ++ G E +GGW
Sbjct: 1799 WEKRTSSEISQNVESASFNSWLPRAGDGGEVEKP-NEWVKKSGSFKKNHGETSGGWG--- 1854
Query: 883 GKSQSSNAGDWKIKKGRAAMSPGKFDD-RNDWSASGIFTATRQRLDQFTSEEQNILSDVE 707
S++GDWKIKK PGKF ND ++ +FT TRQRLD FTSEEQ+ LS +E
Sbjct: 1855 -----SDSGDWKIKKNH----PGKFPRMNNDNTSVRLFTETRQRLDLFTSEEQDALSLIE 1905
Query: 706 PILQSIKRIMHQSRYNDGDPLTADDQSYVLDHVFNY 599
P ++SI+RIMH+S YNDGDP+ +DQS+++D+VFNY
Sbjct: 1906 PTMKSIRRIMHKSGYNDGDPIRPEDQSFIIDNVFNY 1941
Score = 87.0 bits (214), Expect(2) = 3e-43
Identities = 35/54 (64%), Positives = 45/54 (83%)
Frame = -3
Query: 585 HSSFQDTRCFYIVSTDGHREDFSYRKCMENFIKDKYPGMAESFIKKYFRKPRSG 424
HSSFQD+RC Y+VSTDG +EDFSYRKC+ N IK ++P +A+ F+ KYFRKP+ G
Sbjct: 1961 HSSFQDSRCLYVVSTDGRKEDFSYRKCLGNLIKSRFPDVADEFLDKYFRKPKPG 2014
>gb|EYU38281.1| hypothetical protein MIMGU_mgv1a000048mg [Mimulus guttatus]
Length = 2113
Score = 109 bits (273), Expect(2) = 6e-39
Identities = 64/163 (39%), Positives = 90/163 (55%), Gaps = 13/163 (7%)
Frame = -2
Query: 1048 DGNPQWGQWRESHTKPSEESPSYGGWNIRK------SEKRPCDAWGQRDGEEGTGGWNKS 887
D W S K +S GW K ++++P WG+ G GW +
Sbjct: 1816 DNTKNESPWSSSQ-KLLNDSTDSQGWGSSKVDTANDNDEQP--QWGRGRGRGRGRGWGRG 1872
Query: 886 EGKSQSSNAG-------DWKIKKGRAAMSPGKFDDRNDWSASGIFTATRQRLDQFTSEEQ 728
G+ + + G DWK K+ S G DD N A GIFTA+RQRLD FT+EEQ
Sbjct: 1873 VGRGREGSQGRGPTNDRDWKNKR-----SGGPVDDPN---APGIFTASRQRLDSFTAEEQ 1924
Query: 727 NILSDVEPILQSIKRIMHQSRYNDGDPLTADDQSYVLDHVFNY 599
+L + E I+++I+R+MHQ+ YNDGDPL+ADDQ Y++D+V N+
Sbjct: 1925 EVLLETETIMKNIRRVMHQTGYNDGDPLSADDQKYIVDNVLNH 1967
Score = 79.3 bits (194), Expect(2) = 6e-39
Identities = 33/52 (63%), Positives = 42/52 (80%)
Frame = -3
Query: 585 HSSFQDTRCFYIVSTDGHREDFSYRKCMENFIKDKYPGMAESFIKKYFRKPR 430
HS FQ +RC Y V+ DG + DFSYRKC++NFI+ KYP +AESFI KYF+KP+
Sbjct: 1987 HSEFQMSRCLYAVTIDGSKADFSYRKCLDNFIRGKYPDVAESFIAKYFKKPQ 2038
>ref|XP_007133762.1| hypothetical protein PHAVU_011G206900g [Phaseolus vulgaris]
gi|561006762|gb|ESW05756.1| hypothetical protein
PHAVU_011G206900g [Phaseolus vulgaris]
Length = 2052
Score = 95.9 bits (237), Expect(2) = 5e-38
Identities = 58/160 (36%), Positives = 86/160 (53%), Gaps = 11/160 (6%)
Frame = -2
Query: 1045 GNPQWGQ--------WRESHTKPSEESPSYGGWNIRKSEKRPCDAWGQRDGEEGTGGWNK 890
GN WG+ W +SH + ++ S S G W + G + G++G + K
Sbjct: 1804 GNASWGKPNSSGSQSW-DSHNQSNQNSSSRG-WESHIASANSDSEKGFQWGKQGRESFKK 1861
Query: 889 SE---GKSQSSNAGDWKIKKGRAAMSPGKFDDRNDWSASGIFTATRQRLDQFTSEEQNIL 719
+ + + SN+GDWK + R +PG QRLD ++SEEQ++L
Sbjct: 1862 NRFEGSQGRGSNSGDWK-NRNRPPRTPG------------------QRLDLYSSEEQDVL 1902
Query: 718 SDVEPILQSIKRIMHQSRYNDGDPLTADDQSYVLDHVFNY 599
++EPI+QSI+RIM Q YNDGDPL ADDQ +VL++VF +
Sbjct: 1903 KEIEPIMQSIRRIMQQQGYNDGDPLAADDQLFVLENVFEH 1942
Score = 90.1 bits (222), Expect(2) = 5e-38
Identities = 38/53 (71%), Positives = 46/53 (86%)
Frame = -3
Query: 585 HSSFQDTRCFYIVSTDGHREDFSYRKCMENFIKDKYPGMAESFIKKYFRKPRS 427
HSSFQD+RCFY+V DG REDFSYRKC++N+I+ KYP +AESF KYFRKPR+
Sbjct: 1962 HSSFQDSRCFYVVLKDGRREDFSYRKCLDNWIRKKYPELAESFFGKYFRKPRN 2014
>gb|AAX12374.1| DNA-directed RNA polymerase alpha subunit [Spinacia oleracea]
Length = 1902
Score = 102 bits (255), Expect(2) = 6e-38
Identities = 60/160 (37%), Positives = 92/160 (57%), Gaps = 15/160 (9%)
Frame = -2
Query: 1033 WGQWRESHTKPSEESPSYGGWNIRKSEKRPCDAWGQRD------GEEGTGGWNKSEGKSQ 872
WG + K SE+ S+G N+ +K + D G+ G GWNK + +
Sbjct: 1640 WGSEDTNAGKDSEKQDSWGKSNVSTWKKESGEKLHGSDDSQSPWGQPGGSGWNKKQPEGG 1699
Query: 871 ----SSNAGDWKIKKGRAAMSPGKFDDR-----NDWSASGIFTATRQRLDQFTSEEQNIL 719
SSN G+WK +K + + + +R ND S TATR+R+D+F +EE+++L
Sbjct: 1700 RGWGSSNTGEWKSRKNQN-QNQNQNQNRPPRGPNDDSPRVALTATRKRMDEFPTEEKDVL 1758
Query: 718 SDVEPILQSIKRIMHQSRYNDGDPLTADDQSYVLDHVFNY 599
S+VE ++QSI+RIMHQS DG+PL DDQ+Y++D++ NY
Sbjct: 1759 SEVESLMQSIRRIMHQSGCVDGEPLLPDDQTYLIDNILNY 1798
Score = 82.8 bits (203), Expect(2) = 6e-38
Identities = 36/61 (59%), Positives = 47/61 (77%), Gaps = 3/61 (4%)
Frame = -3
Query: 585 HSSFQDTRCFYIVSTDGHREDFSYRKCMENFIKDKYPGMAESFIKKYFR---KPRSGNPA 415
HS+FQ++RCFY+VSTDG DFSY KC+E F+K KYP +AESF KYFR +P+ +P+
Sbjct: 1818 HSNFQESRCFYVVSTDGKDTDFSYIKCIETFVKGKYPSVAESFTSKYFRRSQRPQPASPS 1877
Query: 414 P 412
P
Sbjct: 1878 P 1878
>ref|XP_006598109.1| PREDICTED: DNA-directed RNA polymerase V subunit 1-like [Glycine max]
Length = 2082
Score = 94.7 bits (234), Expect(2) = 3e-36
Identities = 56/158 (35%), Positives = 84/158 (53%), Gaps = 9/158 (5%)
Frame = -2
Query: 1045 GNPQWGQWRESHTKP------SEESPSYGGWNIRKSEKRPCDAWGQRDGEEGTGGWNKSE 884
GN WG+ + S ++ S ++ S GW + G + G++G + K+
Sbjct: 1827 GNASWGKPKSSESQAWDSHNQSNQNSSSQGWESHIASANSESEKGFQWGKQGRDSFKKNR 1886
Query: 883 ---GKSQSSNAGDWKIKKGRAAMSPGKFDDRNDWSASGIFTATRQRLDQFTSEEQNILSD 713
+ + SNAGDWK + R +PG QRLD ++S EQ++L D
Sbjct: 1887 FEGSQGRGSNAGDWK-NRNRPPRAPG------------------QRLDIYSSGEQDVLKD 1927
Query: 712 VEPILQSIKRIMHQSRYNDGDPLTADDQSYVLDHVFNY 599
+EPI+QSI+RIM Q YNDGDPL A+DQ +VL++VF +
Sbjct: 1928 IEPIMQSIRRIMQQQGYNDGDPLAAEDQLFVLENVFEH 1965
Score = 85.1 bits (209), Expect(2) = 3e-36
Identities = 35/53 (66%), Positives = 44/53 (83%)
Frame = -3
Query: 585 HSSFQDTRCFYIVSTDGHREDFSYRKCMENFIKDKYPGMAESFIKKYFRKPRS 427
HSSFQ++RCFY+V DG +DFSYRKC+ N+I KYP +AESF+ KYFRKPR+
Sbjct: 1985 HSSFQESRCFYVVCKDGESKDFSYRKCLANYISKKYPDLAESFLGKYFRKPRA 2037
>ref|XP_003541591.1| PREDICTED: DNA-directed RNA polymerase V subunit 1-like [Glycine max]
Length = 2020
Score = 93.2 bits (230), Expect(2) = 1e-35
Identities = 60/159 (37%), Positives = 83/159 (52%), Gaps = 10/159 (6%)
Frame = -2
Query: 1045 GNPQWGQWR--ESHT----KPSEESPSYGGWNIR----KSEKRPCDAWGQRDGEEGTGGW 896
GN WG+ + ESH S ++ S GW SE WG+ +
Sbjct: 1785 GNTTWGKPKSSESHAWDSHNQSNQNSSSQGWESHIASANSENEKGFQWGKGRDSFKKNRF 1844
Query: 895 NKSEGKSQSSNAGDWKIKKGRAAMSPGKFDDRNDWSASGIFTATRQRLDQFTSEEQNILS 716
S+G+ SNAGDWK + R +PG QRLD ++SEEQ++L
Sbjct: 1845 EGSQGRG--SNAGDWK-NRNRPPRAPG------------------QRLDIYSSEEQDVLK 1883
Query: 715 DVEPILQSIKRIMHQSRYNDGDPLTADDQSYVLDHVFNY 599
D+EPI+QSI+RIM Q Y+DGDPL A+DQ +VL++VF +
Sbjct: 1884 DIEPIMQSIRRIMQQQGYSDGDPLAAEDQLFVLENVFEH 1922
Score = 85.1 bits (209), Expect(2) = 1e-35
Identities = 35/53 (66%), Positives = 44/53 (83%)
Frame = -3
Query: 585 HSSFQDTRCFYIVSTDGHREDFSYRKCMENFIKDKYPGMAESFIKKYFRKPRS 427
HSSFQ++RCFY+V DG +DFSYRKC+ N+I KYP +AESF+ KYFRKPR+
Sbjct: 1942 HSSFQESRCFYVVCKDGQSKDFSYRKCLANYISKKYPDLAESFLGKYFRKPRA 1994
>ref|XP_004511031.1| PREDICTED: DNA-directed RNA polymerase E subunit 1-like [Cicer
arietinum]
Length = 2263
Score = 95.9 bits (237), Expect(2) = 1e-35
Identities = 62/168 (36%), Positives = 83/168 (49%), Gaps = 20/168 (11%)
Frame = -2
Query: 1042 NPQWGQWRESHTKP------SEESPSYGGWNIR----KSEKRPCDAWGQR---------- 923
N WG+ + +P S + S GW+ + S+ WG+
Sbjct: 1983 NSSWGKPKSQENQPWDSKNESNPTASSRGWDSQVASANSDSDKNFQWGKPGRESFKKNRF 2042
Query: 922 DGEEGTGGWNKSEGKSQSSNAGDWKIKKGRAAMSPGKFDDRNDWSASGIFTATRQRLDQF 743
+G +G+ GW SNAGDWK K R A PG RLD +
Sbjct: 2043 EGSQGSQGWG--------SNAGDWK-NKNRPARPPGP------------------RLDLY 2075
Query: 742 TSEEQNILSDVEPILQSIKRIMHQSRYNDGDPLTADDQSYVLDHVFNY 599
+SEEQ+IL D+EPI+QSI+RIM Q YNDGDPL A+DQ YVL++VF +
Sbjct: 2076 SSEEQDILKDIEPIVQSIRRIMQQQGYNDGDPLAAEDQQYVLENVFEH 2123
Score = 82.0 bits (201), Expect(2) = 1e-35
Identities = 34/52 (65%), Positives = 43/52 (82%)
Frame = -3
Query: 585 HSSFQDTRCFYIVSTDGHREDFSYRKCMENFIKDKYPGMAESFIKKYFRKPR 430
HS+FQ++RCFY+V DG +EDFSYRKC+E+F++ KY AESF KYFRKPR
Sbjct: 2143 HSNFQESRCFYVVLKDGKKEDFSYRKCLESFVRKKYADTAESFCGKYFRKPR 2194
>ref|XP_003627838.1| DNA-directed RNA polymerase subunit [Medicago truncatula]
gi|355521860|gb|AET02314.1| DNA-directed RNA polymerase
subunit [Medicago truncatula]
Length = 2032
Score = 94.4 bits (233), Expect(2) = 4e-35
Identities = 55/163 (33%), Positives = 88/163 (53%), Gaps = 12/163 (7%)
Frame = -2
Query: 1051 NDGNPQWGQWRESHTKP-SEESPSYGGWNIRKS-EKRPCDAWGQRDGEEGTGGWNK--SE 884
N+ + WG+ + ++P ++ S W KS E P D+ + + G+ GW+ +
Sbjct: 1727 NESDSSWGKPKSQESQPWDSKNESNSSWGKPKSQENHPWDSKNESNQTAGSRGWDSQVAS 1786
Query: 883 GKSQSSNAGDWKIKKGRAAMSPGKFD-------DRNDW-SASGIFTATRQRLDQFTSEEQ 728
S+S + W K+GR + +F+ + DW + S QR + +T EEQ
Sbjct: 1787 ANSESDKSFQWG-KQGRDSFKKNRFEGSQSGGPNAGDWKNRSRPVRPPGQRFELYTPEEQ 1845
Query: 727 NILSDVEPILQSIKRIMHQSRYNDGDPLTADDQSYVLDHVFNY 599
+I+ D+EPI+QSI+RIM YNDGDPL +DQ YVL++VF +
Sbjct: 1846 DIMKDIEPIVQSIRRIMQLQGYNDGDPLANEDQKYVLENVFEH 1888
Score = 82.0 bits (201), Expect(2) = 4e-35
Identities = 34/52 (65%), Positives = 42/52 (80%)
Frame = -3
Query: 585 HSSFQDTRCFYIVSTDGHREDFSYRKCMENFIKDKYPGMAESFIKKYFRKPR 430
HS+FQD+RC Y+V DG +EDFSYRKC+EN ++ KYP AESF KYFRKP+
Sbjct: 1908 HSNFQDSRCLYVVLKDGKKEDFSYRKCLENLVRKKYPETAESFCGKYFRKPQ 1959
>ref|XP_003627850.1| Protein DCL [Medicago truncatula] gi|355521872|gb|AET02326.1| Protein
DCL [Medicago truncatula]
Length = 481
Score = 94.4 bits (233), Expect(2) = 4e-35
Identities = 55/163 (33%), Positives = 88/163 (53%), Gaps = 12/163 (7%)
Frame = -2
Query: 1051 NDGNPQWGQWRESHTKP-SEESPSYGGWNIRKS-EKRPCDAWGQRDGEEGTGGWNK--SE 884
N+ + WG+ + ++P ++ S W KS E P D+ + + G+ GW+ +
Sbjct: 176 NESDSSWGKPKSQESQPWDSKNESNSSWGKPKSQENHPWDSKNESNQTAGSRGWDSQVAS 235
Query: 883 GKSQSSNAGDWKIKKGRAAMSPGKFD-------DRNDW-SASGIFTATRQRLDQFTSEEQ 728
S+S + W K+GR + +F+ + DW + S QR + +T EEQ
Sbjct: 236 ANSESDKSFQWG-KQGRDSFKKNRFEGSQSGGPNAGDWKNRSRPVRPPGQRFELYTPEEQ 294
Query: 727 NILSDVEPILQSIKRIMHQSRYNDGDPLTADDQSYVLDHVFNY 599
+I+ D+EPI+QSI+RIM YNDGDPL +DQ YVL++VF +
Sbjct: 295 DIMKDIEPIVQSIRRIMQLQGYNDGDPLANEDQKYVLENVFEH 337
Score = 82.0 bits (201), Expect(2) = 4e-35
Identities = 34/52 (65%), Positives = 42/52 (80%)
Frame = -3
Query: 585 HSSFQDTRCFYIVSTDGHREDFSYRKCMENFIKDKYPGMAESFIKKYFRKPR 430
HS+FQD+RC Y+V DG +EDFSYRKC+EN ++ KYP AESF KYFRKP+
Sbjct: 357 HSNFQDSRCLYVVLKDGKKEDFSYRKCLENLVRKKYPETAESFCGKYFRKPQ 408
>ref|XP_002879839.1| NRPD1b [Arabidopsis lyrata subsp. lyrata] gi|297325678|gb|EFH56098.1|
NRPD1b [Arabidopsis lyrata subsp. lyrata]
Length = 1947
Score = 99.4 bits (246), Expect(2) = 5e-35
Identities = 55/159 (34%), Positives = 88/159 (55%), Gaps = 10/159 (6%)
Frame = -2
Query: 1045 GNPQWGQWRESHTKPSEESPSYGGWN----IRKSEKRPCD-----AWGQRDGE-EGTGGW 896
G WG W + + E + N +++++ R D WG + +GGW
Sbjct: 1634 GAAAWGSWGQPTPTAANEDANEDDENPWVSLKETKSRDKDDKERIQWGNPAKKFPSSGGW 1693
Query: 895 NKSEGKSQSSNAGDWKIKKGRAAMSPGKFDDRNDWSASGIFTATRQRLDQFTSEEQNILS 716
+ G DWK K+ P R++ + + +FTATRQRLD FTSEEQ +LS
Sbjct: 1694 SNGGG-------ADWKGKRNHTPRPP-----RSEDNLAPMFTATRQRLDSFTSEEQELLS 1741
Query: 715 DVEPILQSIKRIMHQSRYNDGDPLTADDQSYVLDHVFNY 599
DVEP+++++++IMH S Y DGDP++ DD+++VL+ + N+
Sbjct: 1742 DVEPVMRTLRKIMHPSAYPDGDPISDDDKTFVLEKILNF 1780
Score = 76.6 bits (187), Expect(2) = 5e-35
Identities = 34/56 (60%), Positives = 43/56 (76%), Gaps = 1/56 (1%)
Frame = -3
Query: 585 HSSFQDTRCFYIVSTDGHREDFSYRKCMENFIKDKYPGMAESFIKKYFRKPR-SGN 421
H+ F D+RCF++VSTDG ++DFSYRK + N++ KYP AE FI KYF KPR SGN
Sbjct: 1800 HTIFSDSRCFFVVSTDGAKQDFSYRKSLNNYLMMKYPDRAEEFIDKYFTKPRPSGN 1855