BLASTX nr result

ID: Akebia26_contig00044713 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Akebia26_contig00044713
         (303 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002949932.1| omega-6-FAD, chloroplast isoform [Volvox car...    61   2e-07
ref|XP_001693068.1| omega-6-FAD, chloroplast isoform [Chlamydomo...    59   7e-07
ref|XP_005648776.1| chloroplast w6 desaturase [Coccomyxa subelli...    57   3e-06
gb|ACN59567.1| plastid delta12 fatty acid desaturase [Chlorella ...    56   5e-06
gb|ADB03432.1| plastid delta12 fatty acid desaturase [Chlorella ...    56   6e-06

>ref|XP_002949932.1| omega-6-FAD, chloroplast isoform [Volvox carteri f. nagariensis]
           gi|300264841|gb|EFJ49035.1| omega-6-FAD, chloroplast
           isoform [Volvox carteri f. nagariensis]
          Length = 424

 Score = 60.8 bits (146), Expect = 2e-07
 Identities = 28/52 (53%), Positives = 39/52 (75%)
 Frame = -2

Query: 158 AGAPAMNVTSLGPEERAQKAEEIGYRSIGAELPNGISLADVVKTMPKEVFDI 3
           A A ++ V  L  EERAQ A E+GY+SIG ELP+ ++L D+VK+MP EVF++
Sbjct: 45  AAALSVPVNQLTDEERAQLARELGYKSIGRELPDNVTLTDIVKSMPSEVFEL 96


>ref|XP_001693068.1| omega-6-FAD, chloroplast isoform [Chlamydomonas reinhardtii]
           gi|2696717|dbj|BAA23881.1| chloroplast w6 desaturase
           [Chlamydomonas reinhardtii] gi|158277870|gb|EDP03637.1|
           omega-6-FAD, chloroplast isoform [Chlamydomonas
           reinhardtii]
          Length = 424

 Score = 58.9 bits (141), Expect = 7e-07
 Identities = 28/57 (49%), Positives = 38/57 (66%)
 Frame = -2

Query: 173 QPSRKAGAPAMNVTSLGPEERAQKAEEIGYRSIGAELPNGISLADVVKTMPKEVFDI 3
           Q    A A ++ V  L  EERA  A E+GY+SIG ELP+ +SL D++K+MP EVF +
Sbjct: 40  QVQTNAAALSVPVNQLTDEERANLARELGYKSIGRELPDNVSLTDIIKSMPAEVFKL 96


>ref|XP_005648776.1| chloroplast w6 desaturase [Coccomyxa subellipsoidea C-169]
           gi|384250753|gb|EIE24232.1| chloroplast w6 desaturase
           [Coccomyxa subellipsoidea C-169]
          Length = 402

 Score = 56.6 bits (135), Expect = 3e-06
 Identities = 28/56 (50%), Positives = 40/56 (71%), Gaps = 4/56 (7%)
 Frame = -2

Query: 158 AGAPAMNVTS----LGPEERAQKAEEIGYRSIGAELPNGISLADVVKTMPKEVFDI 3
           A APA+ V S    L  E+R   A+E+GYR+IGA+LPN ++L  V+ ++PKEVF+I
Sbjct: 21  ATAPAVAVPSDAGRLSAEDRTALAQELGYRTIGADLPNDVTLTQVISSLPKEVFEI 76


>gb|ACN59567.1| plastid delta12 fatty acid desaturase [Chlorella vulgaris]
          Length = 423

 Score = 56.2 bits (134), Expect = 5e-06
 Identities = 27/53 (50%), Positives = 39/53 (73%), Gaps = 2/53 (3%)
 Frame = -2

Query: 155 GAPAM--NVTSLGPEERAQKAEEIGYRSIGAELPNGISLADVVKTMPKEVFDI 3
           G PA    V  LG EERA+ A++ G+RSIG ELP+ ++L DV+K+MP +VF++
Sbjct: 45  GLPACPPQVGYLGDEERAELAKQFGFRSIGKELPDSVTLQDVIKSMPPQVFEL 97


>gb|ADB03432.1| plastid delta12 fatty acid desaturase [Chlorella vulgaris]
          Length = 423

 Score = 55.8 bits (133), Expect = 6e-06
 Identities = 26/53 (49%), Positives = 39/53 (73%), Gaps = 2/53 (3%)
 Frame = -2

Query: 155 GAPAM--NVTSLGPEERAQKAEEIGYRSIGAELPNGISLADVVKTMPKEVFDI 3
           G PA    V  LG EERA+ A++ G+RSIG ELP+ ++L D++K+MP +VF++
Sbjct: 45  GLPACPPQVGYLGDEERAELAKQFGFRSIGKELPDSVTLQDIIKSMPPQVFEL 97


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