BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Akebia26_contig00044563
         (314 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AER13159.1| putative Ty-1 copia retrotransposon [Phaseolus vu...   122   4e-26
emb|CAJ86192.1| H0306F03.15 [Oryza sativa Indica Group]               105   5e-21
emb|CAJ86151.1| H0413E07.4 [Oryza sativa Indica Group]                105   5e-21
gb|AAK52561.1|AC079853_14 Putative retroelement pol polyprotein ...   105   6e-21
gb|AAX96781.1| retrotransposon protein, putative, Ty1-copia sub-...   105   8e-21
gb|AAL31093.1|AC091749_22 putative retrotransposon-related prote...   105   8e-21
emb|CAD40363.2| OSJNBa0093P23.9 [Oryza sativa Japonica Group]         104   1e-20
emb|CAH66022.1| OSIGBa0105O19.1 [Oryza sativa Indica Group]           104   1e-20
gb|AAT85194.1| putative polyprotein [Oryza sativa Japonica Group]     104   1e-20
gb|AAR87163.1| putative polyprotein [Oryza sativa Japonica Group...   104   1e-20
gb|ABA96718.1| retrotransposon protein, putative, Ty1-copia subc...   104   1e-20
gb|AAX92941.1| retrotransposon protein, putative, Ty1-copia sub-...   104   1e-20
emb|CAD41912.2| OSJNBa0033G05.13 [Oryza sativa Japonica Group]        104   1e-20
ref|NP_001065797.2| Os11g0157000 [Oryza sativa Japonica Group] g...   104   1e-20
ref|NP_001172143.1| Os01g0116166 [Oryza sativa Japonica Group] g...   104   1e-20
gb|AAT01387.1| putative polyprotein [Oryza sativa Japonica Group...   103   2e-20
gb|ABA96191.1| retrotransposon protein, putative, Ty1-copia subc...   103   2e-20
ref|XP_006651032.1| PREDICTED: uncharacterized protein LOC102707...   103   3e-20
gb|ABA91380.1| retrotransposon protein, putative, Ty1-copia subc...   102   5e-20
gb|ABA97637.1| retrotransposon protein, putative, Ty1-copia subc...   102   7e-20

>gb|AER13159.1| putative Ty-1 copia retrotransposon [Phaseolus vulgaris]
          Length = 867

 Score =  122 bits (307), Expect = 4e-26
 Identities = 56/93 (60%), Positives = 66/93 (70%)
 Frame = +2

Query: 35  GDVATAGNVETTSRDTSRLWHM*LAHTDEKSLLVIVNQGLLKGAKTGKLDFCEHCVLSKH 214
           G VA A +      + ++LWHM L H  EKSL +   QGLLKG K  KL+FCEHCVL K 
Sbjct: 342 GTVAAATSSSKKDAEATKLWHMRLGHAGEKSLQIFTKQGLLKGTKACKLEFCEHCVLGKQ 401

Query: 215 TRVKFGTAIHRTRGILDYVHSDVWGPSRNASLG 313
            RVKFGTAIH T+GILDYVHSDVWGP++  S+G
Sbjct: 402 RRVKFGTAIHNTKGILDYVHSDVWGPAKTPSIG 434


>emb|CAJ86192.1| H0306F03.15 [Oryza sativa Indica Group]
          Length = 1037

 Score =  105 bits (263), Expect = 5e-21
 Identities = 50/93 (53%), Positives = 60/93 (64%)
 Frame = +2

Query: 35  GDVATAGNVETTSRDTSRLWHM*LAHTDEKSLLVIVNQGLLKGAKTGKLDFCEHCVLSKH 214
           G+VAT  +  + S D + LWHM L H  E  L  +  +GLL G   GKL FCEHC+  KH
Sbjct: 235 GNVATVSDSLSNS-DATNLWHMRLGHMSEIGLAELSMRGLLDGQSIGKLKFCEHCIFGKH 293

Query: 215 TRVKFGTAIHRTRGILDYVHSDVWGPSRNASLG 313
            RVKF T+ H T GILDYVHSD+WGP+R  S G
Sbjct: 294 KRVKFNTSTHTTEGILDYVHSDLWGPARKTSFG 326


>emb|CAJ86151.1| H0413E07.4 [Oryza sativa Indica Group]
          Length = 1205

 Score =  105 bits (263), Expect = 5e-21
 Identities = 50/93 (53%), Positives = 60/93 (64%)
 Frame = +2

Query: 35  GDVATAGNVETTSRDTSRLWHM*LAHTDEKSLLVIVNQGLLKGAKTGKLDFCEHCVLSKH 214
           G+VAT  +  + S D + LWHM L H  E  L  +  +GLL G   GKL FCEHC+  KH
Sbjct: 403 GNVATVSDSLSNS-DATNLWHMRLGHMSEIGLAELSMRGLLDGQSIGKLKFCEHCIFGKH 461

Query: 215 TRVKFGTAIHRTRGILDYVHSDVWGPSRNASLG 313
            RVKF T+ H T GILDYVHSD+WGP+R  S G
Sbjct: 462 KRVKFNTSTHTTEGILDYVHSDLWGPARKTSFG 494


>gb|AAK52561.1|AC079853_14 Putative retroelement pol polyprotein [Oryza sativa Japonica Group]
           gi|108708632|gb|ABF96427.1| retrotransposon protein,
           putative, Ty1-copia subclass [Oryza sativa Japonica
           Group]
          Length = 1326

 Score =  105 bits (262), Expect = 6e-21
 Identities = 47/89 (52%), Positives = 58/89 (65%)
 Frame = +2

Query: 47  TAGNVETTSRDTSRLWHM*LAHTDEKSLLVIVNQGLLKGAKTGKLDFCEHCVLSKHTRVK 226
           TA  V       + LWHM L H  E  +  ++ + LL G   GK+ FCEHCV  KH RVK
Sbjct: 414 TAAAVSKDEPIKTNLWHMRLGHMSELGMAELMKRNLLDGCTQGKMKFCEHCVFGKHKRVK 473

Query: 227 FGTAIHRTRGILDYVHSDVWGPSRNASLG 313
           F T++HRT+GILDYVH+D+WGPSR A LG
Sbjct: 474 FNTSVHRTKGILDYVHTDLWGPSRKAYLG 502


>gb|AAX96781.1| retrotransposon protein, putative, Ty1-copia sub-class [Oryza
           sativa Japonica Group] gi|77549746|gb|ABA92543.1|
           retrotransposon protein, putative, Ty1-copia subclass,
           expressed [Oryza sativa Japonica Group]
          Length = 1170

 Score =  105 bits (261), Expect = 8e-21
 Identities = 49/93 (52%), Positives = 60/93 (64%)
 Frame = +2

Query: 35  GDVATAGNVETTSRDTSRLWHM*LAHTDEKSLLVIVNQGLLKGAKTGKLDFCEHCVLSKH 214
           G+VAT   + + S D + LWHM L H  E  L  +  +GLL G   GKL FCEHC+  KH
Sbjct: 453 GNVATVSALLSNS-DATNLWHMRLGHMSEIGLAELSKRGLLDGQSIGKLKFCEHCIFGKH 511

Query: 215 TRVKFGTAIHRTRGILDYVHSDVWGPSRNASLG 313
            RVKF T+ H T GILDYVHS++WGP+R  S G
Sbjct: 512 NRVKFNTSTHTTEGILDYVHSNLWGPARKTSFG 544


>gb|AAL31093.1|AC091749_22 putative retrotransposon-related protein [Oryza sativa Japonica
           Group] gi|22655747|gb|AAN04164.1| Putative
           retrotransposon protein [Oryza sativa Japonica Group]
           gi|31431214|gb|AAP53029.1| retrotransposon protein,
           putative, Ty1-copia subclass, expressed [Oryza sativa
           Japonica Group]
          Length = 1229

 Score =  105 bits (261), Expect = 8e-21
 Identities = 46/89 (51%), Positives = 57/89 (64%)
 Frame = +2

Query: 47  TAGNVETTSRDTSRLWHM*LAHTDEKSLLVIVNQGLLKGAKTGKLDFCEHCVLSKHTRVK 226
           TA  V       + LWHM L H  E  +  ++ + LL G   G + FCEHCV  KH RVK
Sbjct: 411 TAAAVSKDEPSKTNLWHMRLGHMSELGMAELMKRNLLDGCTQGNMKFCEHCVFGKHKRVK 470

Query: 227 FGTAIHRTRGILDYVHSDVWGPSRNASLG 313
           F T++HRT+GILDYVH+D+WGPSR  SLG
Sbjct: 471 FNTSVHRTKGILDYVHADLWGPSRKPSLG 499


>emb|CAD40363.2| OSJNBa0093P23.9 [Oryza sativa Japonica Group]
          Length = 944

 Score =  104 bits (260), Expect = 1e-20
 Identities = 49/93 (52%), Positives = 59/93 (63%)
 Frame = +2

Query: 35  GDVATAGNVETTSRDTSRLWHM*LAHTDEKSLLVIVNQGLLKGAKTGKLDFCEHCVLSKH 214
           G+VA   +  + S D + LWHM L H  E  L  +  +GLL G   GKL FCEHC+  KH
Sbjct: 250 GNVAAVSDSLSNS-DATNLWHMRLGHMSEIGLAELSKRGLLDGQSIGKLKFCEHCIFGKH 308

Query: 215 TRVKFGTAIHRTRGILDYVHSDVWGPSRNASLG 313
            RVKF T+ H T GILDYVHSD+WGP+R  S G
Sbjct: 309 KRVKFNTSTHTTEGILDYVHSDLWGPARKTSFG 341


>emb|CAH66022.1| OSIGBa0105O19.1 [Oryza sativa Indica Group]
          Length = 944

 Score =  104 bits (260), Expect = 1e-20
 Identities = 49/93 (52%), Positives = 59/93 (63%)
 Frame = +2

Query: 35  GDVATAGNVETTSRDTSRLWHM*LAHTDEKSLLVIVNQGLLKGAKTGKLDFCEHCVLSKH 214
           G+VA   +  + S D + LWHM L H  E  L  +  +GLL G   GKL FCEHC+  KH
Sbjct: 250 GNVAAVSDSLSNS-DATNLWHMRLGHMSEIGLAELSKRGLLDGQSIGKLKFCEHCIFGKH 308

Query: 215 TRVKFGTAIHRTRGILDYVHSDVWGPSRNASLG 313
            RVKF T+ H T GILDYVHSD+WGP+R  S G
Sbjct: 309 KRVKFNTSTHTTEGILDYVHSDLWGPARKTSFG 341


>gb|AAT85194.1| putative polyprotein [Oryza sativa Japonica Group]
          Length = 1241

 Score =  104 bits (260), Expect = 1e-20
 Identities = 49/93 (52%), Positives = 59/93 (63%)
 Frame = +2

Query: 35  GDVATAGNVETTSRDTSRLWHM*LAHTDEKSLLVIVNQGLLKGAKTGKLDFCEHCVLSKH 214
           G+VA   +  + S D + LWHM L H  E  L  +  +GLL G   GKL FCEHC+  KH
Sbjct: 327 GNVAAVSDSLSNS-DATNLWHMRLGHMSEIGLAELSKRGLLDGQSIGKLKFCEHCIFGKH 385

Query: 215 TRVKFGTAIHRTRGILDYVHSDVWGPSRNASLG 313
            RVKF T+ H T GILDYVHSD+WGP+R  S G
Sbjct: 386 KRVKFNTSTHTTEGILDYVHSDLWGPARKTSFG 418


>gb|AAR87163.1| putative polyprotein [Oryza sativa Japonica Group]
           gi|53370655|gb|AAU89150.1| integrase core domain
           containing protein [Oryza sativa Japonica Group]
           gi|108710286|gb|ABF98081.1| retrotransposon protein,
           putative, Ty1-copia subclass [Oryza sativa Japonica
           Group]
          Length = 1322

 Score =  104 bits (260), Expect = 1e-20
 Identities = 46/89 (51%), Positives = 57/89 (64%)
 Frame = +2

Query: 47  TAGNVETTSRDTSRLWHM*LAHTDEKSLLVIVNQGLLKGAKTGKLDFCEHCVLSKHTRVK 226
           TA  V       + LWHM L H  E  +  ++ + LL G   G + FCEHCV  KH RVK
Sbjct: 414 TAAAVTKDEPSKTNLWHMRLGHMSELGMAELMKRNLLDGCTQGNMKFCEHCVFGKHKRVK 473

Query: 227 FGTAIHRTRGILDYVHSDVWGPSRNASLG 313
           F T++HRT+GILDYVH+D+WGPSR  SLG
Sbjct: 474 FNTSVHRTKGILDYVHADLWGPSRKPSLG 502


>gb|ABA96718.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
           Japonica Group]
          Length = 1131

 Score =  104 bits (259), Expect = 1e-20
 Identities = 46/89 (51%), Positives = 57/89 (64%)
 Frame = +2

Query: 47  TAGNVETTSRDTSRLWHM*LAHTDEKSLLVIVNQGLLKGAKTGKLDFCEHCVLSKHTRVK 226
           TA  V       + LWHM L H  E  +  ++ + LL G   G + FCEHCV  KH RVK
Sbjct: 364 TAAAVSKDEPSKTNLWHMRLGHMSELGMAELMKRNLLDGYTQGNMKFCEHCVFGKHKRVK 423

Query: 227 FGTAIHRTRGILDYVHSDVWGPSRNASLG 313
           F T++HRT+GILDYVH+D+WGPSR  SLG
Sbjct: 424 FNTSVHRTKGILDYVHADLWGPSRKPSLG 452


>gb|AAX92941.1| retrotransposon protein, putative, Ty1-copia sub-class [Oryza
           sativa Japonica Group] gi|77548751|gb|ABA91548.1|
           retrotransposon protein, putative, Ty1-copia subclass
           [Oryza sativa Japonica Group]
          Length = 2340

 Score =  104 bits (259), Expect = 1e-20
 Identities = 49/93 (52%), Positives = 59/93 (63%)
 Frame = +2

Query: 35  GDVATAGNVETTSRDTSRLWHM*LAHTDEKSLLVIVNQGLLKGAKTGKLDFCEHCVLSKH 214
           G+VA   +  + S D + LWHM L H  E  L  +  +GLL G   GKL FCEHC+  KH
Sbjct: 625 GNVAAVSDSLSNS-DATNLWHMRLGHMTEIGLAELSKRGLLDGQSIGKLKFCEHCIFGKH 683

Query: 215 TRVKFGTAIHRTRGILDYVHSDVWGPSRNASLG 313
            RVKF T+ H T GILDYVHSD+WGP+R  S G
Sbjct: 684 KRVKFNTSTHTTEGILDYVHSDLWGPARKTSFG 716


>emb|CAD41912.2| OSJNBa0033G05.13 [Oryza sativa Japonica Group]
          Length = 1181

 Score =  104 bits (259), Expect = 1e-20
 Identities = 49/93 (52%), Positives = 59/93 (63%)
 Frame = +2

Query: 35  GDVATAGNVETTSRDTSRLWHM*LAHTDEKSLLVIVNQGLLKGAKTGKLDFCEHCVLSKH 214
           G+VAT  +  + S D + LWHM L H  E  L  +  +GLL G    KL FCEHC+  KH
Sbjct: 418 GNVATVSDSLSNS-DATNLWHMRLGHMSEIGLAELSKRGLLDGQSISKLKFCEHCIFGKH 476

Query: 215 TRVKFGTAIHRTRGILDYVHSDVWGPSRNASLG 313
            RVKF T+ H T GILDYVHSD+WGP+R  S G
Sbjct: 477 KRVKFNTSTHTTEGILDYVHSDLWGPARKTSFG 509


>ref|NP_001065797.2| Os11g0157000 [Oryza sativa Japonica Group]
           gi|255679807|dbj|BAF27642.2| Os11g0157000 [Oryza sativa
           Japonica Group]
          Length = 1601

 Score =  104 bits (259), Expect = 1e-20
 Identities = 49/93 (52%), Positives = 59/93 (63%)
 Frame = +2

Query: 35  GDVATAGNVETTSRDTSRLWHM*LAHTDEKSLLVIVNQGLLKGAKTGKLDFCEHCVLSKH 214
           G+VA   +  + S D + LWHM L H  E  L  +  +GLL G   GKL FCEHC+  KH
Sbjct: 418 GNVAAVSDSLSNS-DATNLWHMRLGHMTEIGLAELSKRGLLDGQSIGKLKFCEHCIFGKH 476

Query: 215 TRVKFGTAIHRTRGILDYVHSDVWGPSRNASLG 313
            RVKF T+ H T GILDYVHSD+WGP+R  S G
Sbjct: 477 KRVKFNTSTHTTEGILDYVHSDLWGPARKTSFG 509


>ref|NP_001172143.1| Os01g0116166 [Oryza sativa Japonica Group]
           gi|255672802|dbj|BAH90873.1| Os01g0116166 [Oryza sativa
           Japonica Group]
          Length = 778

 Score =  104 bits (259), Expect = 1e-20
 Identities = 49/93 (52%), Positives = 59/93 (63%)
 Frame = +2

Query: 35  GDVATAGNVETTSRDTSRLWHM*LAHTDEKSLLVIVNQGLLKGAKTGKLDFCEHCVLSKH 214
           G+VA   +  + S D + LWHM L H  E  L  +  +GLL G   GKL FCEHC+  KH
Sbjct: 384 GNVAAVSDSLSNS-DATNLWHMRLGHMSEIGLAELSKRGLLYGQSIGKLKFCEHCIFGKH 442

Query: 215 TRVKFGTAIHRTRGILDYVHSDVWGPSRNASLG 313
            RVKF T+ H T GILDYVHSD+WGP+R  S G
Sbjct: 443 KRVKFNTSTHTTEGILDYVHSDLWGPARKTSFG 475


>gb|AAT01387.1| putative polyprotein [Oryza sativa Japonica Group]
           gi|48475101|gb|AAT44170.1| putative polyprotein [Oryza
           sativa Japonica Group]
          Length = 1175

 Score =  103 bits (258), Expect = 2e-20
 Identities = 45/89 (50%), Positives = 57/89 (64%)
 Frame = +2

Query: 47  TAGNVETTSRDTSRLWHM*LAHTDEKSLLVIVNQGLLKGAKTGKLDFCEHCVLSKHTRVK 226
           TA  V       + +WHM L H  E  +  ++ + LL G   G + FCEHCV  KH RVK
Sbjct: 309 TAAVVSKDEPSKTNMWHMRLGHMSELGMAELMKRNLLDGCTQGNMKFCEHCVFGKHKRVK 368

Query: 227 FGTAIHRTRGILDYVHSDVWGPSRNASLG 313
           F T++HRT+GILDYVH+D+WGPSR  SLG
Sbjct: 369 FNTSVHRTKGILDYVHADLWGPSRKPSLG 397


>gb|ABA96191.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
           Japonica Group]
          Length = 1156

 Score =  103 bits (257), Expect = 2e-20
 Identities = 45/89 (50%), Positives = 57/89 (64%)
 Frame = +2

Query: 47  TAGNVETTSRDTSRLWHM*LAHTDEKSLLVIVNQGLLKGAKTGKLDFCEHCVLSKHTRVK 226
           TA  V       + LWHM L H  E  +  ++ + LL G   G + FCEHCV  KH RVK
Sbjct: 354 TAAAVSKDEPSKTNLWHMRLGHMSELGMAELMKRNLLDGCTQGNMKFCEHCVFGKHKRVK 413

Query: 227 FGTAIHRTRGILDYVHSDVWGPSRNASLG 313
           F T++HR++GILDYVH+D+WGPSR  SLG
Sbjct: 414 FNTSVHRSKGILDYVHADLWGPSRKPSLG 442


>ref|XP_006651032.1| PREDICTED: uncharacterized protein LOC102707106 [Oryza brachyantha]
          Length = 1773

 Score =  103 bits (256), Expect = 3e-20
 Identities = 50/89 (56%), Positives = 56/89 (62%), Gaps = 2/89 (2%)
 Frame = +2

Query: 53  GNVE--TTSRDTSRLWHM*LAHTDEKSLLVIVNQGLLKGAKTGKLDFCEHCVLSKHTRVK 226
           GNV   T S   S LWHM L H  E  L  +  +GLL G   GKL FCEHC+  KH RVK
Sbjct: 360 GNVAAVTDSLSNSDLWHMRLGHMSEIGLAELSKRGLLDGQNIGKLKFCEHCIFGKHKRVK 419

Query: 227 FGTAIHRTRGILDYVHSDVWGPSRNASLG 313
           F T+ H T GILDYVHSD+WGP+R  S G
Sbjct: 420 FTTSTHTTEGILDYVHSDLWGPARKRSFG 448


>gb|ABA91380.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
           Japonica Group]
          Length = 1138

 Score =  102 bits (254), Expect = 5e-20
 Identities = 48/93 (51%), Positives = 58/93 (62%)
 Frame = +2

Query: 35  GDVATAGNVETTSRDTSRLWHM*LAHTDEKSLLVIVNQGLLKGAKTGKLDFCEHCVLSKH 214
           G+VA   +  + S D + LWHM L H  E  L  +  +GLL G   GKL FCEHC+  KH
Sbjct: 336 GNVAVVSDSLSNS-DATNLWHMRLGHMSEIGLAELSKRGLLYGQSIGKLKFCEHCIFGKH 394

Query: 215 TRVKFGTAIHRTRGILDYVHSDVWGPSRNASLG 313
            RVKF T+ H T G LDYVHSD+WGP+R  S G
Sbjct: 395 KRVKFNTSTHTTEGTLDYVHSDLWGPARKTSFG 427


>gb|ABA97637.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
           Japonica Group]
          Length = 1278

 Score =  102 bits (253), Expect = 7e-20
 Identities = 45/89 (50%), Positives = 57/89 (64%)
 Frame = +2

Query: 47  TAGNVETTSRDTSRLWHM*LAHTDEKSLLVIVNQGLLKGAKTGKLDFCEHCVLSKHTRVK 226
           TA  V     + + LWHM L H  E  +  ++ + LL G   G + FCE CV  KH RVK
Sbjct: 414 TAAAVTKDEPNKTNLWHMRLGHMSELGMAELMKRNLLDGCTQGNMKFCERCVFGKHKRVK 473

Query: 227 FGTAIHRTRGILDYVHSDVWGPSRNASLG 313
           F T++HRT+GILDYVH+D+WGPSR  SLG
Sbjct: 474 FNTSVHRTKGILDYVHADLWGPSRKPSLG 502