BLASTX nr result

ID: Akebia26_contig00040173 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Akebia26_contig00040173
         (285 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAA73803.1| reverse transcriptase [Allium cepa]                    92   6e-17
gb|ABD33261.1| RNA-directed DNA polymerase (Reverse transcriptas...    92   7e-17
gb|AAD15471.1| putative non-LTR retroelement reverse transcripta...    89   8e-16
emb|CCA65979.1| hypothetical protein [Beta vulgaris subsp. vulga...    88   1e-15
ref|XP_004293181.1| PREDICTED: uncharacterized protein LOC101298...    88   1e-15
gb|AAC33226.1| putative non-LTR retroelement reverse transcripta...    88   1e-15
gb|AAD21699.1| Contains reverse transcriptase domain (rvt) PF|00...    87   2e-15
gb|AAD08951.1| putative reverse transcriptase [Arabidopsis thali...    87   3e-15
gb|AAF99785.1|AC012463_2 T2E6.4 [Arabidopsis thaliana]                 86   4e-15
emb|CAD22562.1| reverse transcriptase [Brassica rapa subsp. olei...    86   4e-15
gb|AAC13599.1| similar to reverse transcriptase (Pfam: transcrip...    85   9e-15
emb|CAN72143.1| hypothetical protein VITISV_036307 [Vitis vinifera]    83   3e-14
gb|AAC63678.1| putative non-LTR retroelement reverse transcripta...    83   4e-14
ref|XP_002280533.2| PREDICTED: uncharacterized protein LOC100266...    82   6e-14
gb|ABD96942.1| hypothetical protein [Cleome spinosa]                   82   6e-14
emb|CAB72467.1| putative protein [Arabidopsis thaliana]                82   6e-14
emb|CCA65981.1| hypothetical protein [Beta vulgaris subsp. vulga...    82   8e-14
emb|CAN82440.1| hypothetical protein VITISV_006122 [Vitis vinifera]    82   8e-14
emb|CAN69474.1| hypothetical protein VITISV_014375 [Vitis vinifera]    82   8e-14
dbj|BAB01845.1| non-LTR retroelement reverse transcriptase-like ...    82   1e-13

>emb|CAA73803.1| reverse transcriptase [Allium cepa]
          Length = 137

 Score = 92.4 bits (228), Expect = 6e-17
 Identities = 44/93 (47%), Positives = 63/93 (67%)
 Frame = +3

Query: 3   KVLANRLKDTLNELVSPYQSAFIKGRSIRDNIMLSHELVRNIHRDRGPPRCVVKIDLRKA 182
           KVLA+RLK  L  LVSP Q+A++ GR+I D+++LSHEL++   R    PR ++K+D+ KA
Sbjct: 18  KVLASRLKHVLPTLVSPNQAAYLSGRNILDHVLLSHELIKGYKRKSATPRAMLKLDIMKA 77

Query: 183 YDSVS*EVIIHCLEKMKFPNSFSAWIWGCISSP 281
           +D++    I+  L  M FP    AWI+ CISSP
Sbjct: 78  FDTLQWNSIVRILGYMNFPPHIIAWIYECISSP 110


>gb|ABD33261.1| RNA-directed DNA polymerase (Reverse transcriptase) [Medicago
           truncatula]
          Length = 402

 Score = 92.0 bits (227), Expect = 7e-17
 Identities = 45/92 (48%), Positives = 64/92 (69%)
 Frame = +3

Query: 3   KVLANRLKDTLNELVSPYQSAFIKGRSIRDNIMLSHELVRNIHRDRGPPRCVVKIDLRKA 182
           K+L +R++  LN +VS  QSAF+KGR I DNI+LSHELV++  R    PRC+VKIDL+KA
Sbjct: 212 KILTSRMQGVLNSVVSENQSAFVKGRVIFDNIILSHELVKSYSRKGISPRCMVKIDLQKA 271

Query: 183 YDSVS*EVIIHCLEKMKFPNSFSAWIWGCISS 278
           Y+SV    I H + ++ F   F  W+ GC+++
Sbjct: 272 YNSVEWPFIKHLMLELGFSYKFVNWVMGCLTT 303


>gb|AAD15471.1| putative non-LTR retroelement reverse transcriptase [Arabidopsis
           thaliana]
          Length = 1277

 Score = 88.6 bits (218), Expect = 8e-16
 Identities = 41/92 (44%), Positives = 63/92 (68%)
 Frame = +3

Query: 3   KVLANRLKDTLNELVSPYQSAFIKGRSIRDNIMLSHELVRNIHRDRGPPRCVVKIDLRKA 182
           K++ANRLK  L   +   QSAF++ R + +N++L+ ELV++ H+D   PRC +KID+ KA
Sbjct: 686 KIIANRLKVMLPTFILQNQSAFVRERLLMENVLLATELVKDYHKDSISPRCAMKIDISKA 745

Query: 183 YDSVS*EVIIHCLEKMKFPNSFSAWIWGCISS 278
           +DSV  + +++ LE +KFP  F  WI  CIS+
Sbjct: 746 FDSVQWQFLLNTLEALKFPEKFRHWIKLCIST 777


>emb|CCA65979.1| hypothetical protein [Beta vulgaris subsp. vulgaris]
          Length = 1110

 Score = 88.2 bits (217), Expect = 1e-15
 Identities = 42/92 (45%), Positives = 59/92 (64%)
 Frame = +3

Query: 3   KVLANRLKDTLNELVSPYQSAFIKGRSIRDNIMLSHELVRNIHRDRGPPRCVVKIDLRKA 182
           K+L NR+K  + E+V+  QS FI GR I DNI+L+ EL+R   R    PRC++K+D+RKA
Sbjct: 529 KMLTNRMKGIIGEVVNEAQSGFIPGRHIADNILLASELIRGYTRKHMSPRCIMKVDIRKA 588

Query: 183 YDSVS*EVIIHCLEKMKFPNSFSAWIWGCISS 278
           YDSV    +   L +  FP+ F  WI  C+S+
Sbjct: 589 YDSVEWSFLETLLYEFGFPSRFVGWIMECVST 620


>ref|XP_004293181.1| PREDICTED: uncharacterized protein LOC101298394 [Fragaria vesca
           subsp. vesca]
          Length = 958

 Score = 87.8 bits (216), Expect = 1e-15
 Identities = 43/92 (46%), Positives = 59/92 (64%)
 Frame = +3

Query: 3   KVLANRLKDTLNELVSPYQSAFIKGRSIRDNIMLSHELVRNIHRDRGPPRCVVKIDLRKA 182
           K+LANRLK TL+ +V P QS FI GR I DNI+L+ E++ + H+  G PRC   +D+ KA
Sbjct: 365 KLLANRLKGTLHLIVGPSQSTFIPGRRIGDNILLAQEIICDYHKADGQPRCTFMVDMMKA 424

Query: 183 YDSVS*EVIIHCLEKMKFPNSFSAWIWGCISS 278
            D+V  + II  L+    P++   WI  CISS
Sbjct: 425 NDTVEWDFIIATLQAFNIPSTLIGWIKSCISS 456


>gb|AAC33226.1| putative non-LTR retroelement reverse transcriptase [Arabidopsis
            thaliana]
          Length = 1529

 Score = 87.8 bits (216), Expect = 1e-15
 Identities = 41/92 (44%), Positives = 63/92 (68%)
 Frame = +3

Query: 3    KVLANRLKDTLNELVSPYQSAFIKGRSIRDNIMLSHELVRNIHRDRGPPRCVVKIDLRKA 182
            K+LANRLK  L   +   QSAF+K R + +N++L+ ELV++ H++   PRC +KID+ KA
Sbjct: 841  KILANRLKLLLPSFILQNQSAFVKERLLMENVLLATELVKDYHKESVTPRCAMKIDISKA 900

Query: 183  YDSVS*EVIIHCLEKMKFPNSFSAWIWGCISS 278
            +DSV  + +++ LE + FP +F  WI  CIS+
Sbjct: 901  FDSVQWQFLLNTLEALNFPETFRHWIKLCIST 932


>gb|AAD21699.1| Contains reverse transcriptase domain (rvt) PF|00078 [Arabidopsis
           thaliana]
          Length = 1253

 Score = 87.0 bits (214), Expect = 2e-15
 Identities = 40/93 (43%), Positives = 66/93 (70%)
 Frame = +3

Query: 3   KVLANRLKDTLNELVSPYQSAFIKGRSIRDNIMLSHELVRNIHRDRGPPRCVVKIDLRKA 182
           ++L NRL+  L++++SP+QSAF+ GR + +N++L+ ELV+  +R    PR ++K+DLRKA
Sbjct: 491 RLLTNRLQCLLSQVISPFQSAFLPGRFLAENVLLATELVQGYNRQNIDPRGMLKVDLRKA 550

Query: 183 YDSVS*EVIIHCLEKMKFPNSFSAWIWGCISSP 281
           +DS+  + II  L+ +  P+ F  WI  CIS+P
Sbjct: 551 FDSIRWDFIISALKAIGIPDRFVYWITQCISTP 583


>gb|AAD08951.1| putative reverse transcriptase [Arabidopsis thaliana]
            gi|20197043|gb|AAM14892.1| putative reverse transcriptase
            [Arabidopsis thaliana]
          Length = 1412

 Score = 86.7 bits (213), Expect = 3e-15
 Identities = 43/92 (46%), Positives = 61/92 (66%)
 Frame = +3

Query: 3    KVLANRLKDTLNELVSPYQSAFIKGRSIRDNIMLSHELVRNIHRDRGPPRCVVKIDLRKA 182
            K+LANRLK  L E ++P QSAFI  R + +N++L+ ELV++ H+D   PRC +KIDL KA
Sbjct: 810  KLLANRLKCLLPEFIAPNQSAFISDRLLMENLLLASELVKDYHKDGLSPRCAMKIDLSKA 869

Query: 183  YDSVS*EVIIHCLEKMKFPNSFSAWIWGCISS 278
            +DSV    +++ L  +  P  F  WI  CIS+
Sbjct: 870  FDSVQWPFLLNTLAALDIPEKFIHWINLCIST 901


>gb|AAF99785.1|AC012463_2 T2E6.4 [Arabidopsis thaliana]
          Length = 740

 Score = 86.3 bits (212), Expect = 4e-15
 Identities = 40/92 (43%), Positives = 63/92 (68%)
 Frame = +3

Query: 3   KVLANRLKDTLNELVSPYQSAFIKGRSIRDNIMLSHELVRNIHRDRGPPRCVVKIDLRKA 182
           K++ANRLK  L   +   QSAF++ R + +N++L+ ELV++ H+D   PRC +KID+ KA
Sbjct: 117 KIIANRLKVMLPTFILQNQSAFVRERLLIENVLLATELVKDYHKDSISPRCAMKIDISKA 176

Query: 183 YDSVS*EVIIHCLEKMKFPNSFSAWIWGCISS 278
           +DSV  + +++ LE + FP +F  WI  CIS+
Sbjct: 177 FDSVQWQFLLNTLEALNFPENFCHWIKLCIST 208


>emb|CAD22562.1| reverse transcriptase [Brassica rapa subsp. oleifera]
          Length = 137

 Score = 86.3 bits (212), Expect = 4e-15
 Identities = 40/93 (43%), Positives = 64/93 (68%)
 Frame = +3

Query: 3   KVLANRLKDTLNELVSPYQSAFIKGRSIRDNIMLSHELVRNIHRDRGPPRCVVKIDLRKA 182
           K++ANRLK  L + VSP Q+AF+KGRS+ +N++L+ EL+R+ ++       ++K+D+RKA
Sbjct: 18  KIIANRLKPILRDCVSPNQAAFLKGRSLGENVLLASELIRDYNKSSCLRSSMLKVDIRKA 77

Query: 183 YDSVS*EVIIHCLEKMKFPNSFSAWIWGCISSP 281
           +D+V  + +I  L    FP  F +WI  CI+SP
Sbjct: 78  FDTVCWDFVIKILRAQGFPPLFVSWIQECITSP 110


>gb|AAC13599.1| similar to reverse transcriptase (Pfam: transcript_fact.hmm, score:
           72.31) [Arabidopsis thaliana]
          Length = 928

 Score = 85.1 bits (209), Expect = 9e-15
 Identities = 40/92 (43%), Positives = 63/92 (68%)
 Frame = +3

Query: 3   KVLANRLKDTLNELVSPYQSAFIKGRSIRDNIMLSHELVRNIHRDRGPPRCVVKIDLRKA 182
           K++ANRLK  L + +   QSAF+K R + +N++L+ E+V++ H+D    RC +KID+ KA
Sbjct: 432 KIIANRLKLVLPKFIVGNQSAFVKDRLLIENVLLATEIVKDYHKDSVSSRCALKIDISKA 491

Query: 183 YDSVS*EVIIHCLEKMKFPNSFSAWIWGCISS 278
           +DSV  + +I+ LE M FP  F+ WI  CI++
Sbjct: 492 FDSVQWKFLINVLEAMNFPPEFTHWITLCITT 523


>emb|CAN72143.1| hypothetical protein VITISV_036307 [Vitis vinifera]
          Length = 781

 Score = 83.2 bits (204), Expect = 3e-14
 Identities = 39/92 (42%), Positives = 63/92 (68%)
 Frame = +3

Query: 3   KVLANRLKDTLNELVSPYQSAFIKGRSIRDNIMLSHELVRNIHRDRGPPRCVVKIDLRKA 182
           KVLANR+K+ + ++VSPYQ+AFI GR I D  ++++E++ +  + RG    + K+D+ KA
Sbjct: 159 KVLANRIKNVIGKVVSPYQNAFIMGRQILDASLIANEVIDSWQK-RGEKGLICKLDIEKA 217

Query: 183 YDSVS*EVIIHCLEKMKFPNSFSAWIWGCISS 278
           YDSV+   ++  L+KM F   +  W+W CIS+
Sbjct: 218 YDSVNWHFLMRVLQKMGFGAKWREWMWSCIST 249


>gb|AAC63678.1| putative non-LTR retroelement reverse transcriptase [Arabidopsis
           thaliana]
          Length = 1216

 Score = 82.8 bits (203), Expect = 4e-14
 Identities = 40/92 (43%), Positives = 59/92 (64%)
 Frame = +3

Query: 3   KVLANRLKDTLNELVSPYQSAFIKGRSIRDNIMLSHELVRNIHRDRGPPRCVVKIDLRKA 182
           K+LANRLK  L + +   QSAF+K R + +N++L+ ELV++ H+D    RC +KID+ KA
Sbjct: 265 KILANRLKRILPKFIVGNQSAFVKDRLLIENVLLATELVKDYHKDSISTRCAMKIDISKA 324

Query: 183 YDSVS*EVIIHCLEKMKFPNSFSAWIWGCISS 278
           +DS+    + H L  M FP  F  WI  C+S+
Sbjct: 325 FDSLQWSFLTHVLAAMNFPGEFIHWISLCMST 356


>ref|XP_002280533.2| PREDICTED: uncharacterized protein LOC100266246 [Vitis vinifera]
          Length = 2234

 Score = 82.4 bits (202), Expect = 6e-14
 Identities = 37/92 (40%), Positives = 65/92 (70%)
 Frame = +3

Query: 3    KVLANRLKDTLNELVSPYQSAFIKGRSIRDNIMLSHELVRNIHRDRGPPRCVVKIDLRKA 182
            KVLANR+K  + +++SP Q+AFIKGR I D  ++++E++ ++ + RG    V K+D+ KA
Sbjct: 864  KVLANRIKKVIGKVISPDQNAFIKGRQILDGSLIANEVI-DLWQKRGEKGIVCKLDIEKA 922

Query: 183  YDSVS*EVIIHCLEKMKFPNSFSAWIWGCISS 278
            YDS++ + ++  ++KM F + +  W+W CIS+
Sbjct: 923  YDSINWQFLLKVMQKMGFGSKWIGWMWYCIST 954


>gb|ABD96942.1| hypothetical protein [Cleome spinosa]
          Length = 402

 Score = 82.4 bits (202), Expect = 6e-14
 Identities = 42/93 (45%), Positives = 63/93 (67%)
 Frame = +3

Query: 3   KVLANRLKDTLNELVSPYQSAFIKGRSIRDNIMLSHELVRNIHRDRGPPRCVVKIDLRKA 182
           K++ANRL+  L  L+S  Q+AF KGRS+ D+IML+ ELV++ +R    P  ++KID++KA
Sbjct: 48  KIIANRLQLLLPWLISGNQAAFQKGRSMGDHIMLAAELVKDYNRPSAEPSAMLKIDIKKA 107

Query: 183 YDSVS*EVIIHCLEKMKFPNSFSAWIWGCISSP 281
           +DS+S + I+  L  +  P  F  WI  CI+SP
Sbjct: 108 FDSISWDFILDILRALDLPLVFIGWIRECITSP 140


>emb|CAB72467.1| putative protein [Arabidopsis thaliana]
          Length = 762

 Score = 82.4 bits (202), Expect = 6e-14
 Identities = 40/93 (43%), Positives = 61/93 (65%)
 Frame = +3

Query: 3   KVLANRLKDTLNELVSPYQSAFIKGRSIRDNIMLSHELVRNIHRDRGPPRCVVKIDLRKA 182
           K+LANRLK  L + ++  QS+F+K R + +N++L+ +LV++ H+D    RC +KID+ KA
Sbjct: 97  KILANRLKLLLPQFIAGNQSSFVKDRLLIENVLLATDLVKDYHKDSISERCAIKIDISKA 156

Query: 183 YDSVS*EVIIHCLEKMKFPNSFSAWIWGCISSP 281
            DSV    +I+ L  M FP  F  WI  CI++P
Sbjct: 157 SDSVQWSFLINTLTAMHFPEMFIHWIRLCITTP 189


>emb|CCA65981.1| hypothetical protein [Beta vulgaris subsp. vulgaris]
          Length = 1114

 Score = 82.0 bits (201), Expect = 8e-14
 Identities = 39/92 (42%), Positives = 58/92 (63%)
 Frame = +3

Query: 3   KVLANRLKDTLNELVSPYQSAFIKGRSIRDNIMLSHELVRNIHRDRGPPRCVVKIDLRKA 182
           K+L  RL+  + E+V   Q+ FI  R I DNI+L+ EL+R  +R    PRCV+K+D+RKA
Sbjct: 532 KILTKRLQAVITEVVDCAQTGFIPERHIGDNILLATELIRGYNRRHVSPRCVIKVDIRKA 591

Query: 183 YDSVS*EVIIHCLEKMKFPNSFSAWIWGCISS 278
           YDSV    +   L+++ FP+ F  WI  C+ +
Sbjct: 592 YDSVEWVFLESMLKELGFPSMFIRWIMACVKT 623


>emb|CAN82440.1| hypothetical protein VITISV_006122 [Vitis vinifera]
          Length = 1030

 Score = 82.0 bits (201), Expect = 8e-14
 Identities = 37/92 (40%), Positives = 64/92 (69%)
 Frame = +3

Query: 3   KVLANRLKDTLNELVSPYQSAFIKGRSIRDNIMLSHELVRNIHRDRGPPRCVVKIDLRKA 182
           KVLANRLK  + +++SP Q+AFIKGR I D  ++++E++ +  + RG    + K+D+ KA
Sbjct: 343 KVLANRLKKIIGKVISPDQNAFIKGRQILDGSLIANEVIDSWXK-RGEKGLICKLDIEKA 401

Query: 183 YDSVS*EVIIHCLEKMKFPNSFSAWIWGCISS 278
           YDS++ + ++  ++KM F + +  W+W CIS+
Sbjct: 402 YDSINWQFLLKVMQKMGFGSKWIGWMWSCIST 433


>emb|CAN69474.1| hypothetical protein VITISV_014375 [Vitis vinifera]
          Length = 1383

 Score = 82.0 bits (201), Expect = 8e-14
 Identities = 37/92 (40%), Positives = 64/92 (69%)
 Frame = +3

Query: 3   KVLANRLKDTLNELVSPYQSAFIKGRSIRDNIMLSHELVRNIHRDRGPPRCVVKIDLRKA 182
           KVLANRLK  + +++SP Q+AFIKGR I D  ++++E++ +  + RG    V K+D+ KA
Sbjct: 354 KVLANRLKKVIGKVISPDQNAFIKGRQILDGSLIANEVI-DAWQKRGEKGIVCKLDIEKA 412

Query: 183 YDSVS*EVIIHCLEKMKFPNSFSAWIWGCISS 278
           YD+++ + ++  ++KM F + +  W+W CIS+
Sbjct: 413 YDNINWQFLLKVMQKMGFGSKWIGWMWNCIST 444


>dbj|BAB01845.1| non-LTR retroelement reverse transcriptase-like protein
           [Arabidopsis thaliana]
          Length = 893

 Score = 81.6 bits (200), Expect = 1e-13
 Identities = 40/93 (43%), Positives = 59/93 (63%)
 Frame = +3

Query: 3   KVLANRLKDTLNELVSPYQSAFIKGRSIRDNIMLSHELVRNIHRDRGPPRCVVKIDLRKA 182
           K+L +RLK  LNE++SP QSAF+ GR + +N++L+ E+V   +      R ++K+DLRKA
Sbjct: 539 KLLTSRLKKLLNEVISPSQSAFLPGRLLSENVLLATEIVHGYNTKNISSRGMLKVDLRKA 598

Query: 183 YDSVS*EVIIHCLEKMKFPNSFSAWIWGCISSP 281
           +DSV  + II     +  P  F  WI  CIS+P
Sbjct: 599 FDSVRWDFIISAFRALAVPEKFVCWINQCISTP 631


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